CSPI06G05880 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G05880
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Vestitone reductase-like
Location	Chr6: 5239001 .. 5239322 (-)
RNA-Seq Expression	CSPI06G05880
Synteny	CSPI06G05880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTGGGATGAAGGGGAAAGTTTGTGTAACAGGAGGTAGTGGGTTTATAGGATCGTGGCTCGTCAAGCGCCTTCTCGAAGATGGTTACTCCGTCACAACCACTGTAAGATCTGACCCAGGTACGTCAAGGATCGGGGCTAGGAAGAAAAATGACTCTTTAGTTTGCGTAATTAAAAATGTATTCTTATAAAGTTTTTCCACTAAGCTATGCTAACTTAGATTGACAATCTAACACGATTATTTTTTCTCTCTTATTTACAGAGAAGAAAAGAGATTATAGCTTCTTAACAAATCTACCAGGAGCATCAAAGAATTAA

mRNA sequence

ATGGAAGGTGGGATGAAGGGGAAAGTTTGTGTAACAGGAGGTAGTGGGTTTATAGGATCGTGGCTCGTCAAGCGCCTTCTCGAAGATGGTTACTCCGTCACAACCACTGTAAGATCTGACCCAGAGAAGAAAAGAGATTATAGCTTCTTAACAAATCTACCAGGAGCATCAAAGAATTAA

Coding sequence (CDS)

ATGGAAGGTGGGATGAAGGGGAAAGTTTGTGTAACAGGAGGTAGTGGGTTTATAGGATCGTGGCTCGTCAAGCGCCTTCTCGAAGATGGTTACTCCGTCACAACCACTGTAAGATCTGACCCAGAGAAGAAAAGAGATTATAGCTTCTTAACAAATCTACCAGGAGCATCAAAGAATTAA

Protein sequence

MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASKN*

Homology

[Close]

BLAST of CSPI06G05880 vs. ExPASy Swiss-Prot
Match: Q40316 (Vestitone reductase OS=Medicago sativa OX=3879 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.7e-19
Identity = 40/53 (75.47%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 6  KGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASK 59
          KG+VCVTGG+GF+GSW++K LLE+GYSV TT+R+DPE+KRD SFLTNLPGAS+
Sbjct: 5  KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASE 57

[Close]

BLAST of CSPI06G05880 vs. ExPASy Swiss-Prot
Match: I3PLR3 (Noscapine synthase SDR1 OS=Papaver somniferum OX=3469 GN=SDR1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.8e-11
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 1  MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASK 59
          MEG  K  VCVTGG+G++ SWL+ RLLE GYSV TTVRSDP+ + D S L  LP A++
Sbjct: 17 MEGTGK-IVCVTGGAGYLASWLIMRLLERGYSVRTTVRSDPKFREDVSHLKALPEATE 73

[Close]

BLAST of CSPI06G05880 vs. ExPASy Swiss-Prot
Match: O22133 (Protein BRI1-5 ENHANCED 1 OS=Arabidopsis thaliana OX=3702 GN=BEN1 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.7e-11
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 7  GKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPE-KKRDYSFLTNLPGASK 59
          G VCVTGGSGF+ SWL+ RLL+ GYSV  TVR++ E  K+D S+LT LP AS+
Sbjct: 38 GLVCVTGGSGFVASWLIMRLLQRGYSVRATVRTNSEGNKKDISYLTELPFASE 90

[Close]

BLAST of CSPI06G05880 vs. ExPASy Swiss-Prot
Match: Q5XLY0 (Putative anthocyanidin reductase OS=Ginkgo biloba OX=3311 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.8e-10
Identity = 34/54 (62.96%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 4  GMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGAS 58
          G    VCVTG +GF+ SWLVKRLLE GY V  TVR DPE K   S L NLPGA+
Sbjct: 10 GQTTTVCVTGAAGFMASWLVKRLLEKGYIVHATVR-DPENKAKVSHLLNLPGAT 62

[Close]

BLAST of CSPI06G05880 vs. ExPASy Swiss-Prot
Match: P14720 (Dihydroflavonol 4-reductase OS=Petunia hybrida OX=4102 GN=DFRA PE=2 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-09
Identity = 32/51 (62.75%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 9  VCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASKN 60
          VCVTG +GFIGSWLV RLLE GY+V  TVR DPE K+    L  LP A  N
Sbjct: 18 VCVTGAAGFIGSWLVMRLLERGYNVHATVR-DPENKKKVKHLLELPKADTN 67

[Close]

BLAST of CSPI06G05880 vs. ExPASy TrEMBL
Match: A0A5A7TFG8 (Vestitone reductase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00440 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.0e-25
Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASKN 60
          MEGGMKGKVCVTGG+GFIGSWLVKRLLEDGYSV+TTVRSDPEKKRDYSFLTNLPGASKN
Sbjct: 1  MEGGMKGKVCVTGGTGFIGSWLVKRLLEDGYSVSTTVRSDPEKKRDYSFLTNLPGASKN 59

[Close]

BLAST of CSPI06G05880 vs. ExPASy TrEMBL
Match: A0A1S3CC98 (LOW QUALITY PROTEIN: vestitone reductase-like OS=Cucumis melo OX=3656 GN=LOC103499025 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.0e-25
Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASKN 60
          MEGGMKGKVCVTGG+GFIGSWLVKRLLEDGYSV+TTVRSDPEKKRDYSFLTNLPGASKN
Sbjct: 1  MEGGMKGKVCVTGGTGFIGSWLVKRLLEDGYSVSTTVRSDPEKKRDYSFLTNLPGASKN 59

[Close]

BLAST of CSPI06G05880 vs. ExPASy TrEMBL
Match: A0A6J1DLQ5 (vestitone reductase-like OS=Momordica charantia OX=3673 GN=LOC111022109 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.3e-22
Identity = 51/58 (87.93%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1  MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASK 59
          MEGG KGKVCVTGG+GF+GSWLVK+LL++GYSVTTTVRSDPEKKRDYSFLTNLPGAS+
Sbjct: 1  MEGGPKGKVCVTGGTGFVGSWLVKKLLDNGYSVTTTVRSDPEKKRDYSFLTNLPGASE 58

[Close]

BLAST of CSPI06G05880 vs. ExPASy TrEMBL
Match: A0A6J1D8V1 (vestitone reductase-like OS=Momordica charantia OX=3673 GN=LOC111018442 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.3e-21
Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASK 59
          MEGG KGKVCVTGG+GFIGSWLVK+LLE  YSV TTVRSDPEKKRDYSFLTNLPGAS+
Sbjct: 1  MEGGAKGKVCVTGGTGFIGSWLVKKLLESDYSVNTTVRSDPEKKRDYSFLTNLPGASE 58

[Close]

BLAST of CSPI06G05880 vs. ExPASy TrEMBL
Match: A0A6J1DA42 (vestitone reductase-like OS=Momordica charantia OX=3673 GN=LOC111018433 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-19
Identity = 48/58 (82.76%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 1  MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASK 59
          MEGG KGKVCVTG +GF+GSWLVK+LLE GYSV  TVRSDPEKKRDYSFLTNLP AS+
Sbjct: 1  MEGGAKGKVCVTGATGFVGSWLVKKLLESGYSVNATVRSDPEKKRDYSFLTNLPEASE 58

[Close]

BLAST of CSPI06G05880 vs. NCBI nr
Match: KAA0039999.1 (vestitone reductase-like [Cucumis melo var. makuwa] >TYK24502.1 vestitone reductase-like [Cucumis melo var. makuwa])

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-24
Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASKN 60
          MEGGMKGKVCVTGG+GFIGSWLVKRLLEDGYSV+TTVRSDPEKKRDYSFLTNLPGASKN
Sbjct: 1  MEGGMKGKVCVTGGTGFIGSWLVKRLLEDGYSVSTTVRSDPEKKRDYSFLTNLPGASKN 59

[Close]

BLAST of CSPI06G05880 vs. NCBI nr
Match: XP_008460122.1 (PREDICTED: LOW QUALITY PROTEIN: vestitone reductase-like [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-24
Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASKN 60
          MEGGMKGKVCVTGG+GFIGSWLVKRLLEDGYSV+TTVRSDPEKKRDYSFLTNLPGASKN
Sbjct: 1  MEGGMKGKVCVTGGTGFIGSWLVKRLLEDGYSVSTTVRSDPEKKRDYSFLTNLPGASKN 59

[Close]

BLAST of CSPI06G05880 vs. NCBI nr
Match: XP_022154968.1 (vestitone reductase-like [Momordica charantia])

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21
Identity = 51/58 (87.93%), Postives = 57/58 (98.28%), Query Frame = 0


Query: 1  MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASK 59
          MEGG KGKVCVTGG+GF+GSWLVK+LL++GYSVTTTVRSDPEKKRDYSFLTNLPGAS+
Sbjct: 1  MEGGPKGKVCVTGGTGFVGSWLVKKLLDNGYSVTTTVRSDPEKKRDYSFLTNLPGASE 58

[Close]

BLAST of CSPI06G05880 vs. NCBI nr
Match: XP_022150218.1 (vestitone reductase-like [Momordica charantia])

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20
Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASK 59
          MEGG KGKVCVTGG+GFIGSWLVK+LLE  YSV TTVRSDPEKKRDYSFLTNLPGAS+
Sbjct: 1  MEGGAKGKVCVTGGTGFIGSWLVKKLLESDYSVNTTVRSDPEKKRDYSFLTNLPGASE 58

[Close]

BLAST of CSPI06G05880 vs. NCBI nr
Match: XP_038906732.1 (vestitone reductase-like [Benincasa hispida])

HSP 1 Score: 104.8 bits (260), Expect = 2.7e-19
Identity = 47/58 (81.03%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MEGGMKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASK 59
          ME G KGKVCVTGG+GFI SWL+KRLLE+GYSVTTTVR+DPEK++DYSFLTNLP AS+
Sbjct: 1  MESGAKGKVCVTGGTGFIASWLIKRLLENGYSVTTTVRADPEKRKDYSFLTNLPSASE 58

[Close]

BLAST of CSPI06G05880 vs. TAIR 10
Match: AT2G45400.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 2.6e-12
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 7  GKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPE-KKRDYSFLTNLPGASK 59
          G VCVTGGSGF+ SWL+ RLL+ GYSV  TVR++ E  K+D S+LT LP AS+
Sbjct: 38 GLVCVTGGSGFVASWLIMRLLQRGYSVRATVRTNSEGNKKDISYLTELPFASE 90

[Close]

BLAST of CSPI06G05880 vs. TAIR 10
Match: AT4G35420.1 (dihydroflavonol 4-reductase-like1 )

HSP 1 Score: 61.6 bits (148), Expect = 2.5e-10
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 6  KGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASK 59
          KGKVCVTG SGF+ SWLVKRLL +GY V  TVR DP  ++  + L  L GA +
Sbjct: 5  KGKVCVTGASGFLASWLVKRLLLEGYEVIGTVR-DPGNEKKLAHLWKLEGAKE 56

[Close]

BLAST of CSPI06G05880 vs. TAIR 10
Match: AT5G42800.1 (dihydroflavonol 4-reductase )

HSP 1 Score: 58.2 bits (139), Expect = 2.7e-09
Identity = 31/51 (60.78%), Postives = 33/51 (64.71%), Query Frame = 0


Query: 6  KGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGA 57
          K  VCVTG SGFIGSWLV RLLE GY V  TVR DP   +    L +LP A
Sbjct: 5  KETVCVTGASGFIGSWLVMRLLERGYFVRATVR-DPGNLKKVQHLLDLPNA 54

[Close]

BLAST of CSPI06G05880 vs. TAIR 10
Match: AT1G76470.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 4.6e-09
Identity = 31/55 (56.36%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 5  MKGKVCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASKN 60
          +K KVCVTG  GFI SWLVK LL  GY+V  TVR   ++K D+  L  L  ASKN
Sbjct: 3  VKQKVCVTGAGGFIASWLVKFLLSRGYTVHGTVRDPCDEKNDH--LRKLDNASKN 55

[Close]

BLAST of CSPI06G05880 vs. TAIR 10
Match: AT1G09490.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 1.1e-07
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 9  VCVTGGSGFIGSWLVKRLLEDGYSVTTTVRSDPEKKRDYSFLTNLPGASK 59
          VCVTG SG+I SW+VK LL  GY+V  TVR DP+ K+    L  L GA +
Sbjct: 8  VCVTGASGYIASWIVKLLLLRGYTVNATVR-DPKDKKKTEHLLALDGAKE 56

The following BLAST results are available for this feature:

BLAST of CSPI06G05880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40316	3.7e-19	75.47	Vestitone reductase OS=Medicago sativa OX=3879 PE=1 SV=1	[more]
I3PLR3	2.8e-11	60.34	Noscapine synthase SDR1 OS=Papaver somniferum OX=3469 GN=SDR1 PE=1 SV=1	[more]
O22133	3.7e-11	62.26	Protein BRI1-5 ENHANCED 1 OS=Arabidopsis thaliana OX=3702 GN=BEN1 PE=2 SV=1	[more]
Q5XLY0	1.8e-10	62.96	Putative anthocyanidin reductase OS=Ginkgo biloba OX=3311 PE=2 SV=1	[more]
P14720	1.2e-09	62.75	Dihydroflavonol 4-reductase OS=Petunia hybrida OX=4102 GN=DFRA PE=2 SV=2	[more]

BLAST of CSPI06G05880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TFG8	8.0e-25	96.61	Vestitone reductase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CC98	8.0e-25	96.61	LOW QUALITY PROTEIN: vestitone reductase-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1DLQ5	6.3e-22	87.93	vestitone reductase-like OS=Momordica charantia OX=3673 GN=LOC111022109 PE=3 SV=...	[more]
A0A6J1D8V1	5.3e-21	87.93	vestitone reductase-like OS=Momordica charantia OX=3673 GN=LOC111018442 PE=3 SV=...	[more]
A0A6J1DA42	1.7e-19	82.76	vestitone reductase-like OS=Momordica charantia OX=3673 GN=LOC111018433 PE=3 SV=...	[more]

BLAST of CSPI06G05880 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039999.1	1.6e-24	96.61	vestitone reductase-like [Cucumis melo var. makuwa] >TYK24502.1 vestitone reduct...	[more]
XP_008460122.1	1.6e-24	96.61	PREDICTED: LOW QUALITY PROTEIN: vestitone reductase-like [Cucumis melo]	[more]
XP_022154968.1	1.3e-21	87.93	vestitone reductase-like [Momordica charantia]	[more]
XP_022150218.1	1.1e-20	87.93	vestitone reductase-like [Momordica charantia]	[more]
XP_038906732.1	2.7e-19	81.03	vestitone reductase-like [Benincasa hispida]	[more]

BLAST of CSPI06G05880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45400.1	2.6e-12	62.26	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G35420.1	2.5e-10	58.49	dihydroflavonol 4-reductase-like1	[more]
AT5G42800.1	2.7e-09	60.78	dihydroflavonol 4-reductase	[more]
AT1G76470.1	4.6e-09	56.36	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G09490.1	1.1e-07	54.00	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 6..59 e-value: 8.0E-22 score: 80.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..59
None	No IPR available	PANTHER	PTHR10366	NAD DEPENDENT EPIMERASE/DEHYDRATASE	coord: 6..58
None	No IPR available	PANTHER	PTHR10366:SF617	DIHYDROFLAVONOL 4-REDUCTASE-LIKE PROTEIN	coord: 6..58
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 9..43 e-value: 6.6E-8 score: 32.3
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 5..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G05880.1	CSPI06G05880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
molecular_function	GO:0003824	catalytic activity