CSPI06G05760 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G05760
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Phosphorylated adapter RNA export protein
Location	Chr6: 5165102 .. 5169343 (+)
RNA-Seq Expression	CSPI06G05760
Synteny	CSPI06G05760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATATTTCGTCTTCCTCCTAGTGCATCAGTACTGAGCAAAACACCATTTCTTCCTTTCTACCTTTCTCCCTTTTTCCTTATTCTTCAATCTTCATATCTCCTTCCAAACTTCTCTACTCTAAACCCACGATCCCACGCCCTCTCCCCCGTAGTCTCCATCGCTCTCTCCCTTAAGATTTCCCGTTAAAGCTTCACCGCCACTCCATTAATTCTTCTCCACTTTCTGGGTAAGTTTTATGATTGCATTTGAGGTTTCCCATTTCCATCGCTCTTTCCCTTATGATTTATTGTATCTGCTGCTCTCACTATTCGAGTTCATTTGATTACTGGGAGGCTGTTGACTACACTTATTGTACTTGTTTTGAAGCTTTGATTGTTAAGGATATGGATTGTTTTAGTTTATTTATGCTCAAATTTGTAGTTACCGTATTGAACTAAATCTTGTTACAGTGTTGGCAACTAAATCTTTCATCTTTGTATGAGCTTAATAAGAGACTCTTGATCTCTCCTAGGCCTTGATGTGGGCGCATACTTTTGGAGAAAAGAGAGGAAACAAATGTTTTGACAACCAATTTTGACATTTTACTGTTGAGTAATTTTTATCTCACTGAGCGCCCAAAAGCTATGCAAGTGTTGATTTCATTTCCGTCTTGCTATCCTGATAATTTCAAGTTGCAGTTTATATATGTTCCCTGATATTTTCTCTAGGATGTTTGATTATTTTATGAAATCCTTTGTTTCTCTGAATAAGGAGTGTCTGATTATTTTATATAGTTGATGTATCTTATGGATGGACAAGAGAACATACTTGAGGCCATATATGAAGACGATAAGTTGGAAAATGATGATGTTGAAATGGCCGATGTGGAGGAAGGGGAGTTCATTGACGACAATATCAATATAGAGAAAAGCAGTTTTACAGATGTCCAAGCACCAAGTACGGATCAGAGAAGTAAAAATCGTAAACATCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTACGTGGAATCTTCTAATCATGTTGTATATGCAATTGCATGGAAAAAGAAGCAATATTGCAAGCTTTCTTGAGATGCGTTTTTTGTTTGGAAATCCATTATAGTTTTGCCAAGTAATTGTAGATTTAACAGGAGTTTTTACTCTGGTTGCTATGTTATTGTGCTGATTTCCGTGTTTTCTCAGGTTTGTGTTGAATGCATGCAGACTTTTGAAAGAGAAAAAATCGTACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCTGCATTAAGCGAACTTATCAAAGAGGTATTATGATTTTCTTGTAACCTGATAAAAGAATGTTTTGTTTGATTGAGTGATAAAAAATTATGTCTTATACATTAGTATTAGTTTGAAAACTTCCCTTCTGTTTTTTAAAGTTCTGTTTGAAAGTGAAATGAATTGACCAGCCACTAACCAAACCAACATAATTGAGTTCCATCGGTTTTCCCTTTTGGTTTGCATTCAGCCCCCTAGTGAGTACAACTCATGAATTATTTTACTGTTCACTAACTATGCCTTTGCTCACTACTTTTTGTATCCTCGGTACTTTGCCTAGGGCCACAAGCAATTGCCTTCCTGGTAAAAGTGAATTTCTTTAACTTAAATTTTGAGTTTTGACTGACCTGCCTAGACATGGCCATTCACGTTGGAAATGACTTGTGGGCTTGGGCTCATAAGCAAAGAACAAGACTCATAAGCAAAGTACATCGATTTTGTCCAACATTGGAGAATTTTGAAATACCAAGAGGGTATAAAATACCAAGGTATGTTAGGTGTGAGACTAAAGTATTTTGGTGGTGATAGCATAACTCTATCACCACAAGCGCGCCTTAGTATGTCAGGTCGGATAACCGCGCTTGTGCGAAAAAGAATCAACTTTTTATTTTCTATACGTTTGATTTTATAACTCCTATTTGGCAATTAAACATTTTGCTTTTTACAATTAATATTTTTCTCCGTTTCCTACCTGTTGGAAAACCCTACCTGGCCGTTTTCTTTTCTTCCTCTTTATCTATCATCATCTTAATCCAGATTTGGGTATCCGAAAACCATCTACTCTCTGTTCTTTAATCTTGTTCTTGATCTTGATTCTATTCCTTGTTCCGACGAGTGCACGTCGAAATAAGGAAGCTATGTTAACCTTGAGGAGCAACCGGCATTTGATTGGCACCACGGTTGTGCCAAAATTGCTTTCAAGGTAGTTGTTCGTCACAGCGCAGCAATTCCTTTTGAAATCTTATTAACAACAATTCACTCCAAACTCCAGTAAGTATCATACCACACAGCCACTCTTCATATTTAATCAGTATTATTTCCTACCCTTGCAGATTCTGTTGCTGAAGTCATTTTGCTCCTTTTAACCTTGTTCTCTGAGCTGTGAATCACCATTGCTGGACTACTACATCTGTGCTATATAAGTTGATGCTATTATCCCAGCATATATTGGTTATGATCTCTGTAAGATATTTGTACTTTATTACAAAAAAAACCTTTAGTATTAATCGCAATTTACAATCAATCTTTTCCACCCACTTCCCTGAAAATACTACACCTGATTATTTTCACTGAATCCGGACTTCGTCAAAATGCTCTTGGAAGTTTTAACATGTACATTTAATTGGAATGCCCAAACTAAATTTGCAGCTCAGTTGTGCATGTCCTATCATACTTTTCATCTTGGGGTTTGAGATTTGCTTTCATGTGAACTCTTGAAAATCTGTTCACTTTTAAAAATTTATAACCGTTTGTCAAATTCTTTATATGCAGAAGAGCCCTTGCCTTGCATTTCCCCTTTGAGTTACTGATGATGCTTAACTAGAGATAGGCAGCATAGTTAATCAATGGTTGATTTTGCTTGTAATTGTTTTAGCATTTTTCTTCTTTTACAATACGACAACCTATGATCTTATGTGCACAAGTTGACATGTCGGAATACCAGGTCAATGCAGTTCAAGCTTGTGGAGGTCAGATGACTGCAGATGGCAGGCGCTTTCGGACGGGAGGTGGCATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTACAAAGAGATAATGAAACGTGCAAAAGAGTTTGAGGTATTTAACAAGACCCTTGTGACATACTTTATAACTCGAAAAACCTTTACGTGTTTTTTCCTTTATTCTTATTAAAATAAGTGCTATTCTTATTTTGGCCACATAAAAAAAAAATACTATCAATATTCCTAGAGGACACTTCTAAAATTTTTCATTGTGAAGACAAACTTTTTCATCTTTTCAAACCTTTGATTTTATTCAGAGTGGGCTCAGTTTCCTAAGCCTGTTTCTAACGTTTGAAATTGCTGAGCTTATTTACTCTCTGTTTTCTTTCTTTCTTCTTTTCTTTTGGATTTTAATTGTATTTTGAAGAGTTGAACACGTACTTTTGAAGTATTGTAAACTCCGTCTCACAGTATAAGAAGTTAGGCATAAGATTGTTGTTTTCTAGTCATGGGATGCTCAAACTCCTTTGGCCAAACAAGGTGTAGAGTTCACAACCCTGTTTTCCCAACTACTTGCAGCAAGCACCCCCTCTGATGTTAGAATAGAAAATGCGTTGGAGTGAAATTCTGTATGATCCTATCGTGATGTTGTTCCTTCATTAGTTATTTCGTATTATACATATTTTTGTTACTTTCATGATGGTGCAGAAACAATTTAAGCAACCAAATGTGAGAAGGGAGGCTACAGAAACTGAGAAAGAAAGTTCTCAAAAAGTTCCTCACCTTTTCTCTGAAGGATCTTCTAGAAATCTGCCAGATCACGTCCAAAGCTTTTCTTCAGAGCTGAATCAATCTAAGGAATCAAATTCCGAAGAAAAACTGTTTTCTATTCACGATAGATTAAGAGTACCAGTTTCATATGATGATGACCTCCTTCAAGAAAATCCGAAAGAGGAAGATACAACTGACTGTAGATAGGTTTTCCCATTTTTTTGAACAATTGCTGTTGGTTTTTAGTTCGTGTCTAACCAAATCAACAGTTTTTACCTCCAAAACATGAGGCAGAAGAATGTTCTATAAGCTGAGTTTGTTACTTTCATTTTCAGTGCCTTTTTGTTTTAGGCTGCTTTGGTTGAGTGCCTGCTTGTTCAGATGAGGTTGGAATTAGCCACATGGAAACAAATTGGATTTATTGGTTGTAAATGGGAA

mRNA sequence

TAATATTTCGTCTTCCTCCTAGTGCATCAGTACTGAGCAAAACACCATTTCTTCCTTTCTACCTTTCTCCCTTTTTCCTTATTCTTCAATCTTCATATCTCCTTCCAAACTTCTCTACTCTAAACCCACGATCCCACGCCCTCTCCCCCGTAGTCTCCATCGCTCTCTCCCTTAAGATTTCCCGTTAAAGCTTCACCGCCACTCCATTAATTCTTCTCCACTTTCTGGTTGATGTATCTTATGGATGGACAAGAGAACATACTTGAGGCCATATATGAAGACGATAAGTTGGAAAATGATGATGTTGAAATGGCCGATGTGGAGGAAGGGGAGTTCATTGACGACAATATCAATATAGAGAAAAGCAGTTTTACAGATGTCCAAGCACCAAGTACGGATCAGAGAAGTAAAAATCGTAAACATCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTTGTGTTGAATGCATGCAGACTTTTGAAAGAGAAAAAATCGTACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCTGCATTAAGCGAACTTATCAAAGAGGTCAATGCAGTTCAAGCTTGTGGAGGTCAGATGACTGCAGATGGCAGGCGCTTTCGGACGGGAGGTGGCATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTACAAAGAGATAATGAAACGTGCAAAAGAGTTTGAGAAACAATTTAAGCAACCAAATGTGAGAAGGGAGGCTACAGAAACTGAGAAAGAAAGTTCTCAAAAAGTTCCTCACCTTTTCTCTGAAGGATCTTCTAGAAATCTGCCAGATCACGTCCAAAGCTTTTCTTCAGAGCTGAATCAATCTAAGGAATCAAATTCCGAAGAAAAACTGTTTTCTATTCACGATAGATTAAGAGTACCAGTTTCATATGATGATGACCTCCTTCAAGAAAATCCGAAAGAGGAAGATACAACTGACTGTAGATAGGTTTTCCCATTTTTTTGAACAATTGCTGTTGGTTTTTAGTTCGTGTCTAACCAAATCAACAGTTTTTACCTCCAAAACATGAGGCAGAAGAATGTTCTATAAGCTGAGTTTGTTACTTTCATTTTCAGTGCCTTTTTGTTTTAGGCTGCTTTGGTTGAGTGCCTGCTTGTTCAGATGAGGTTGGAATTAGCCACATGGAAACAAATTGGATTTATTGGTTGTAAATGGGAA

Coding sequence (CDS)

ATGTATCTTATGGATGGACAAGAGAACATACTTGAGGCCATATATGAAGACGATAAGTTGGAAAATGATGATGTTGAAATGGCCGATGTGGAGGAAGGGGAGTTCATTGACGACAATATCAATATAGAGAAAAGCAGTTTTACAGATGTCCAAGCACCAAGTACGGATCAGAGAAGTAAAAATCGTAAACATCGGACAAAGAAAAAGAAGAACAAAAGAAAGTCAAGCGAGCCAGGTTCAAATGGCACTGATATAAACAGGTTTGTGTTGAATGCATGCAGACTTTTGAAAGAGAAAAAATCGTACATGGTGTACACTGCTGTAGGTTGTCTTGGAGTCTCTGCATTAAGCGAACTTATCAAAGAGGTCAATGCAGTTCAAGCTTGTGGAGGTCAGATGACTGCAGATGGCAGGCGCTTTCGGACGGGAGGTGGCATATTATGGAGCATCATCAAAACCCGGGAACCAAATGCCTACAAAGAGATAATGAAACGTGCAAAAGAGTTTGAGAAACAATTTAAGCAACCAAATGTGAGAAGGGAGGCTACAGAAACTGAGAAAGAAAGTTCTCAAAAAGTTCCTCACCTTTTCTCTGAAGGATCTTCTAGAAATCTGCCAGATCACGTCCAAAGCTTTTCTTCAGAGCTGAATCAATCTAAGGAATCAAATTCCGAAGAAAAACTGTTTTCTATTCACGATAGATTAAGAGTACCAGTTTCATATGATGATGACCTCCTTCAAGAAAATCCGAAAGAGGAAGATACAACTGACTGTAGATAG

Protein sequence

MYLMDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLFSIHDRLRVPVSYDDDLLQENPKEEDTTDCR*

Homology

[Close]

BLAST of CSPI06G05760 vs. ExPASy TrEMBL
Match: A0A0A0KBJ7 (Phosphorylated adapter RNA export protein OS=Cucumis sativus OX=3659 GN=Csa_6G076770 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-135
Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MYLMDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSK 60
           MYLMDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSK
Sbjct: 1   MYLMDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSK 60

Query: 61  NRKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELI 120
           NRKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELI
Sbjct: 61  NRKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELI 120

Query: 121 KEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRR 180
           KEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRR
Sbjct: 121 KEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRR 180

Query: 181 EATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLFSIHDRLRVPVS 240
           EATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKL SIHDRLRVPVS
Sbjct: 181 EATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVS 240

Query: 241 YDDDLLQENPKEEDTTDCR 260
           YDDDLLQENPKEEDTTDCR
Sbjct: 241 YDDDLLQENPKEEDTTDCR 259

[Close]

BLAST of CSPI06G05760 vs. ExPASy TrEMBL
Match: A0A5D3DLH5 (Phosphorylated adapter RNA export protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00350 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.6e-122
Identity = 239/254 (94.09%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63
           MDG ENILEAIYE D+ ENDDVEMADVEEGEFID NINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123
            RTKKKKNKRKSSEPGSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+RREAT
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180

Query: 184 ETEKESSQKVPHLFSE-GSSRNLPDHVQSFSSELNQSKESNSEEKLFSIHDRLRVPVSYD 243
           ETEKESSQKVPHLFSE GSSRNLPDHVQSF+SELN+SKESNSEEK  SIHDRLRVP+SYD
Sbjct: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240

Query: 244 DDLLQENPKEEDTT 257
           DDLLQENPKEEDTT
Sbjct: 241 DDLLQENPKEEDTT 254

[Close]

BLAST of CSPI06G05760 vs. ExPASy TrEMBL
Match: A0A1S3CD38 (Phosphorylated adapter RNA export protein OS=Cucumis melo OX=3656 GN=LOC103499036 PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.1e-122
Identity = 239/254 (94.09%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63
           MDGQENILEAIYE D+ ENDDVEMADVEEGEFID NINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123
            RTKKKKNKRKSSEPGSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+RREA 
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAR 180

Query: 184 ETEKESSQKVPHLFSE-GSSRNLPDHVQSFSSELNQSKESNSEEKLFSIHDRLRVPVSYD 243
           ETEKESSQKVPHLFSE GSSRNLPDHVQSF+SELN+SKESNSEEK  SIHDRLRVP+SYD
Sbjct: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240

Query: 244 DDLLQENPKEEDTT 257
           DDLLQENPKEEDTT
Sbjct: 241 DDLLQENPKEEDTT 254

[Close]

BLAST of CSPI06G05760 vs. ExPASy TrEMBL
Match: A0A6J1H592 (Phosphorylated adapter RNA export protein OS=Cucurbita moschata OX=3662 GN=LOC111460255 PE=3 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.6e-108
Identity = 211/253 (83.40%), Postives = 230/253 (90.91%), Query Frame = 0


Query: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63
           MDGQENILEAIYE+D LENDDVEM DVEEGEF++ NI+ EKSS TDVQAPS D +SKNRK
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNISTEKSSLTDVQAPSIDHKSKNRK 60

Query: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123
            R+KKKKNKRK+ E GSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+RREAT
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180

Query: 184 ETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLFSIHDRLRVPVSYDD 243
           E  K SSQ V HLFSEG+S++ PD +QS + E NQSKESNSEEK  S+H+RLRVPVSYDD
Sbjct: 181 EIGKASSQDVLHLFSEGASQDQPDSIQSLTPEQNQSKESNSEEKRSSVHERLRVPVSYDD 240

Query: 244 DLLQENPKEEDTT 257
           D+L+ENPKEEDT+
Sbjct: 241 DILRENPKEEDTS 253

[Close]

BLAST of CSPI06G05760 vs. ExPASy TrEMBL
Match: A0A6J1KUZ4 (Phosphorylated adapter RNA export protein OS=Cucurbita maxima OX=3661 GN=LOC111498940 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.0e-105
Identity = 208/253 (82.21%), Postives = 227/253 (89.72%), Query Frame = 0


Query: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63
           MDGQENILEAIYE+D LENDDVEM DVEEGE ++ NI+ EKSS TDVQAPS D RSKNRK
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGELVEGNISTEKSSLTDVQAPSIDHRSKNRK 60

Query: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123
            R+KKKKNKRK+ E GSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSE IKEV
Sbjct: 61  RRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSEFIKEV 120

Query: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+RREAT
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180

Query: 184 ETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLFSIHDRLRVPVSYDD 243
           E  K SSQ+V HLFS+G+S++ PD +QS +   NQSKESNSEEK  S+ +RLRVPVSYDD
Sbjct: 181 EIGKASSQEVLHLFSQGASQDQPDSIQSLTPLQNQSKESNSEEKRSSVLERLRVPVSYDD 240

Query: 244 DLLQENPKEEDTT 257
           D+L+ENPKEEDTT
Sbjct: 241 DILRENPKEEDTT 253

[Close]

BLAST of CSPI06G05760 vs. NCBI nr
Match: XP_004144996.1 (uncharacterized protein LOC101205280 isoform X1 [Cucumis sativus])

HSP 1 Score: 491.5 bits (1264), Expect = 4.5e-135
Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MYLMDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSK 60
           MYLMDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSK
Sbjct: 1   MYLMDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSK 60

Query: 61  NRKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELI 120
           NRKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELI
Sbjct: 61  NRKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELI 120

Query: 121 KEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRR 180
           KEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRR
Sbjct: 121 KEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRR 180

Query: 181 EATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLFSIHDRLRVPVS 240
           EATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKL SIHDRLRVPVS
Sbjct: 181 EATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVS 240

Query: 241 YDDDLLQENPKEEDTTDCR 260
           YDDDLLQENPKEEDTTDCR
Sbjct: 241 YDDDLLQENPKEEDTTDCR 259

[Close]

BLAST of CSPI06G05760 vs. NCBI nr
Match: XP_031744074.1 (uncharacterized protein LOC101205280 isoform X2 [Cucumis sativus] >KAE8646696.1 hypothetical protein Csa_005172 [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 1.4e-128
Identity = 251/259 (96.91%), Postives = 251/259 (96.91%), Query Frame = 0


Query: 1   MYLMDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSK 60
           MYLMDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSK
Sbjct: 1   MYLMDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSK 60

Query: 61  NRKHRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELI 120
           NRKHRTKKKKNKRKSSEPGSNGTDIN       RLLKEKKSYMVYTAVGCLGVSALSELI
Sbjct: 61  NRKHRTKKKKNKRKSSEPGSNGTDIN-------RLLKEKKSYMVYTAVGCLGVSALSELI 120

Query: 121 KEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRR 180
           KEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRR
Sbjct: 121 KEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRR 180

Query: 181 EATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLFSIHDRLRVPVS 240
           EATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKL SIHDRLRVPVS
Sbjct: 181 EATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLSSIHDRLRVPVS 240

Query: 241 YDDDLLQENPKEEDTTDCR 260
           YDDDLLQENPKEEDTTDCR
Sbjct: 241 YDDDLLQENPKEEDTTDCR 252

[Close]

BLAST of CSPI06G05760 vs. NCBI nr
Match: KAA0040009.1 (uncharacterized protein E6C27_scaffold122G002920 [Cucumis melo var. makuwa] >TYK24493.1 uncharacterized protein E5676_scaffold266G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 448.7 bits (1153), Expect = 3.3e-122
Identity = 239/254 (94.09%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63
           MDG ENILEAIYE D+ ENDDVEMADVEEGEFID NINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGHENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123
            RTKKKKNKRKSSEPGSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+RREAT
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180

Query: 184 ETEKESSQKVPHLFSE-GSSRNLPDHVQSFSSELNQSKESNSEEKLFSIHDRLRVPVSYD 243
           ETEKESSQKVPHLFSE GSSRNLPDHVQSF+SELN+SKESNSEEK  SIHDRLRVP+SYD
Sbjct: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240

Query: 244 DDLLQENPKEEDTT 257
           DDLLQENPKEEDTT
Sbjct: 241 DDLLQENPKEEDTT 254

[Close]

BLAST of CSPI06G05760 vs. NCBI nr
Match: XP_008460135.1 (PREDICTED: uncharacterized protein LOC103499036 [Cucumis melo])

HSP 1 Score: 448.4 bits (1152), Expect = 4.3e-122
Identity = 239/254 (94.09%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63
           MDGQENILEAIYE D+ ENDDVEMADVEEGEFID NINIEKSSFTDVQAPSTDQRSKNRK
Sbjct: 1   MDGQENILEAIYEADEFENDDVEMADVEEGEFIDANINIEKSSFTDVQAPSTDQRSKNRK 60

Query: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123
            RTKKKKNKRKSSEPGSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRTKKKKNKRKSSEPGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+RREA 
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAR 180

Query: 184 ETEKESSQKVPHLFSE-GSSRNLPDHVQSFSSELNQSKESNSEEKLFSIHDRLRVPVSYD 243
           ETEKESSQKVPHLFSE GSSRNLPDHVQSF+SELN+SKESNSEEK  SIHDRLRVP+SYD
Sbjct: 181 ETEKESSQKVPHLFSEGGSSRNLPDHVQSFTSELNRSKESNSEEKRSSIHDRLRVPISYD 240

Query: 244 DDLLQENPKEEDTT 257
           DDLLQENPKEEDTT
Sbjct: 241 DDLLQENPKEEDTT 254

[Close]

BLAST of CSPI06G05760 vs. NCBI nr
Match: XP_023547831.1 (uncharacterized protein LOC111806680 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108
Identity = 213/253 (84.19%), Postives = 231/253 (91.30%), Query Frame = 0


Query: 4   MDGQENILEAIYEDDKLENDDVEMADVEEGEFIDDNINIEKSSFTDVQAPSTDQRSKNRK 63
           MDGQENILEAIYE+D LENDDVEM DVEEGEF++ NI+ EKSS TDVQAPS D RSKNRK
Sbjct: 1   MDGQENILEAIYEEDDLENDDVEMVDVEEGEFVEGNISTEKSSLTDVQAPSIDHRSKNRK 60

Query: 64  HRTKKKKNKRKSSEPGSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVSALSELIKEV 123
            R+KKKKNKRK+ E GSNGTDINRFVL+ACR LKEKKSYMVYTAVGCLGVSALSELIKEV
Sbjct: 61  RRSKKKKNKRKTYESGSNGTDINRFVLDACRRLKEKKSYMVYTAVGCLGVSALSELIKEV 120

Query: 124 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNVRREAT 183
           NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPN+RREAT
Sbjct: 121 NAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFKQPNIRREAT 180

Query: 184 ETEKESSQKVPHLFSEGSSRNLPDHVQSFSSELNQSKESNSEEKLFSIHDRLRVPVSYDD 243
           E  K SSQ+V HLFSEG+S++ PD +QS + E NQSKESNSEEK  S+H+RLRVPVSYDD
Sbjct: 181 EIGKASSQEVLHLFSEGASQDQPDSIQSLTPEQNQSKESNSEEKRSSVHERLRVPVSYDD 240

Query: 244 DLLQENPKEEDTT 257
           D+L+ENPKEEDTT
Sbjct: 241 DILRENPKEEDTT 253

[Close]

BLAST of CSPI06G05760 vs. TAIR 10
Match: AT3G20430.1 (CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro:IPR019385); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-47
Identity = 116/264 (43.94%), Postives = 168/264 (63.64%), Query Frame = 0


Query: 4   MDGQENILEAIYEDDKLEN-DDVEMADVEEGEFIDDN-------INIEKSSFTDVQAPST 63
           M+G+E++L+AI E+D  EN +DVEM DVEEGE + D+        N +     D +A   
Sbjct: 1   MEGEESLLDAINEEDGFENLEDVEMVDVEEGEIVVDHDLDSGERQNDDGDGVKDKEAILG 60

Query: 64  DQRSKNRKHRTKKKKNKRKSSEP-GSNGTDINRFVLNACRLLKEKKSYMVYTAVGCLGVS 123
           ++    + ++ K+KK K+K   P       ++ FV + CR LKEKKSYM+YTAVGCLG++
Sbjct: 61  EKNGLQQTNKNKRKKKKKKRKGPVMDKPMSVDWFVRDTCRRLKEKKSYMIYTAVGCLGIA 120

Query: 124 ALSELIKEVNAVQACGGQMTADGRRFRTGGGILWSIIKTREPNAYKEIMKRAKEFEKQFK 183
           ALS+L+ EV A++ CGGQ+TADG R RT GG+LW+IIK R+P AY+EIMK+ KEFEKQF+
Sbjct: 121 ALSDLVNEVVAIETCGGQVTADGTRKRTSGGVLWNIIKARQPEAYREIMKKTKEFEKQFR 180

Query: 184 QPNVRREATETEKESSQKVPHLFSEGSSRNLPDHVQSFSSEL-----NQSKESNSEEKLF 243
           QPN R ++     + S       SEG +       ++  SE+      +  ES  E++  
Sbjct: 181 QPNTRPKSGPKRDQGSS------SEGLASGNVSADEALVSEMCVMPVAEQTESKPEKERK 240

Query: 244 SIHDRLRVPVSYDDDLLQENPKEE 254
           S+H+R+RVPVSY DDL ++ P ++
Sbjct: 241 SVHERIRVPVSY-DDLFRDAPLDD 257

The following BLAST results are available for this feature:

BLAST of CSPI06G05760 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G05760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBJ7	2.2e-135	99.61	Phosphorylated adapter RNA export protein OS=Cucumis sativus OX=3659 GN=Csa_6G07...	[more]
A0A5D3DLH5	1.6e-122	94.09	Phosphorylated adapter RNA export protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CD38	2.1e-122	94.09	Phosphorylated adapter RNA export protein OS=Cucumis melo OX=3656 GN=LOC10349903...	[more]
A0A6J1H592	6.6e-108	83.40	Phosphorylated adapter RNA export protein OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KUZ4	3.0e-105	82.21	Phosphorylated adapter RNA export protein OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of CSPI06G05760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144996.1	4.5e-135	99.61	uncharacterized protein LOC101205280 isoform X1 [Cucumis sativus]	[more]
XP_031744074.1	1.4e-128	96.91	uncharacterized protein LOC101205280 isoform X2 [Cucumis sativus] >KAE8646696.1 ...	[more]
KAA0040009.1	3.3e-122	94.09	uncharacterized protein E6C27_scaffold122G002920 [Cucumis melo var. makuwa] >TYK...	[more]
XP_008460135.1	4.3e-122	94.09	PREDICTED: uncharacterized protein LOC103499036 [Cucumis melo]	[more]
XP_023547831.1	1.2e-108	84.19	uncharacterized protein LOC111806680 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI06G05760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20430.1	8.3e-47	43.94	CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA export protein, RNA-bindi...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038092	Phosphorylated adapter RNA export protein, RNA-binding domain superfamily	GENE3D	1.10.10.1440		coord: 80..177 e-value: 3.0E-30 score: 106.2
IPR019385	Phosphorylated adapter RNA export protein, RNA-binding domain	PFAM	PF10258	RNA_GG_bind	coord: 91..168 e-value: 1.3E-22 score: 79.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..219
IPR039047	Phosphorylated adapter RNA export protein	PANTHER	PTHR13135	CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26	coord: 4..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G05760.1	CSPI06G05760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0006408	snRNA export from nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding