CSPI06G04730 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G04730
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	light-harvesting complex-like protein OHP2, chloroplastic
Location	Chr6: 4297481 .. 4300486 (+)
RNA-Seq Expression	CSPI06G04730
Synteny	CSPI06G04730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGACATCATATCCACACCAAACATATCCCCTCCTCAAATCCTAATCCCTTTCTCTTAAACCAAATCCCTTTTTCATCCTTTGTTTTTTTCTTTTTTATTCTTTTGACTTCAATTCTTCCATTTCACTTCCACTCACAATTTTCTGAAATGTCTGGGGCTTGTTCATTCCCCTTCCCCAGTATCAAAATCCCCTCCACTTCCTCCTCACCGGCCGCCACCTCCGCTGCCGCTTCTTCCTCCGCCTCCACCTCCTCTTCAGCTTCTTCTTCATCCTCCCTCCGATTCTCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCCCCGCCCTCTCCCCCTTCCCTGACGCCTCCTCTCAAGCCTACTCCTCCCCCGCAATCCCCTCCGTCGGATAATGTGATCACATTGGAGTTTCAGCGGCTCAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTCCATTTCATTTCCCCATCCTTTTTTTTTTCTTCTTTTTCTTTGATTCTGTTGTGGTTGCTTAAATTTGAACGGGATTTATTCTTGTTTGTTCGTTATGATATTTCTGAAGCACTAAAAAGAAGAAATAAGTTTTGAGAATACAAGCATAAAATTTTAATTTTTAAGAGAGAATACTAAAAGTGAAATGGTTATTAAATTGTATATGTTTAACCATCAGGTCAAAGGCTTTTCTTGATTTGTAGAAGTAAGCTACACTGTGGTGTCAACTTCCATAAGGCTTTAAAAACTTATTTGACTAGTCCCCAGTTAATTTTTGCTTGTAGTTGCAAGTTTTGATTATGTTCAAGTGCCAAAACTCCATTTCTTTCTTTTATCTTTATGGACAACCAATTCATTTCAAATAGAGTCGTTTGCAACACTTTCTCTGTTTGAGCATTCATAGTTTGCATCTGATTGAGTTAAAAACAGTCCCTATGTGTACCTTTGTTTCGTTCCATAATGTACTGGGTGTCATAGTTGTCAGTAGGGATTTACACGGGATGAGGTGGCTTTCGAAGGTGTCCAACCCAACTCTTAAGATTCGAGTTGAGTTGGTGATATGGAAACCTATGATTTGAAAATTAGGAACCCACCTCTAATATAAATTCGAGTTAATTTAAAACCTCAATTCAAAGATGATATGAACTGGTATGTCTTTGTGTTGCCTCCGGGACCAATCACACGTTCCAGAACTAAGAAAATACAGTTAGCATTGAATTCTCACGTTCAAGATCAGGAAGTGCACTCAATTGAGGAGAGAAGATTATAATCGGAGTCCGTTGACGCTACAAGATGAAACCAATTGACCTTTGACATCTCATGACTTTAAGACTGTTGTGCAAGTCATTTATTTGGATTTGAGGATGAATCCTTCAAAAGTAGGAGGAGGGGTTGATATGAACCGAAACATCAAATTATTGGTGAACCTCTAATAGCAAATTCCAAATGATATGAAGACCCTGTCACTGGAGGATTTGAAAACCTTAATATTTGAAAATTAGGAACTCAATTAGTGAACCTCAATATCATATTCTAAAATCCCAAATCAATTTGACACAACAATCCAAAGGAAAGGACTAGAATTGAATTACCTTTTGATCGAAAATCAATAAATAAGGAGAACTAGTTCACTCAAGGTGATCAAACTTAAAAAAGGTGGTGATAAGACTATCATCGATTTCTATTCATAGAAAAGCTCTAGAACTTCAATTGTCGAAACTAACTTGAAAAACCTAAAGGCAAGACTTAAATATCCTCCCAATAAAATCCTAATTTATTGTGAAAGGGCTAAATTAACCCTACTTAAATGTTATTAAAAAGAATAAAACTGAAAAATATTAAAATTGTATCACAATCTTTAAATAAAATCTAAGCAATAATTTGATGTTTGGTCGATTCATATTAGTTGGATTGAGTTAGTTTGTCAAATTCTTATTAATTTAAAATACTTGATTTTATCGGCCACACATGAATAATAATTAAAATCTTGTAAAACTTAAATGTTTAATATCAAATATCCATGATATCTATCCTAAACTTTGGACAAAGGCGAACATCGTAACTATTCTAAAAGAAAAACATTGAAAATTCACAATTATCTATCCATAGTCAGTCAAACATAAAACAAAGGCAAATATTAGTACGTGGTTGGGTTGGGTTGGGTCAACACTAAAAATAATAAATAAAAATATTAATCGAGATCCAATCCAAACAGACGAAAACAGAAAAAATTAACTTAACCCAACTCCAGAACAAAAGTAATGCAACCCTATCCAACAAATAGAAAATCTTTAACCCAACCATAAAAGTAACACAACCCAACACTTACAGTCTGGGTTAGGTTGTTTGGGTTGTCGAGTCATTTCAATACCTTTAGTTGCTATACTATCAGATATCAGTTGTTCCGTTTACTGTTAATGGGTGATACCTCACTACTTTCCTTGGTTGTTTTTTACTAAACAGGTGGGCTATGTTTGGTTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCGAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGACGCGATGTACGAGGTCAATGTTGCTATATTTTTCCATTTTCTGTAATTTATGTATCTACATCATGTAATTCATCTTATAGTCTTCATGAGAGTTTTGTTGTCTGTTACACTTAATTGCCATGCAAGTGTGTGTGCTCCTTGCAATACTTTACTGTTTTTCAGTTATATATAAAAATCTTCCCCCCTTTTTTATGAGTCTGTAATTCTAATTCAGTTGGAGCATATTACCTATTCAAACCTTGCTAAAATTCTGTACCTTCATTTATTAGAGGTTCCATTTACATAATAAAAACGTTGAAACTAT

mRNA sequence

GGCGACATCATATCCACACCAAACATATCCCCTCCTCAAATCCTAATCCCTTTCTCTTAAACCAAATCCCTTTTTCATCCTTTGTTTTTTTCTTTTTTATTCTTTTGACTTCAATTCTTCCATTTCACTTCCACTCACAATTTTCTGAAATGTCTGGGGCTTGTTCATTCCCCTTCCCCAGTATCAAAATCCCCTCCACTTCCTCCTCACCGGCCGCCACCTCCGCTGCCGCTTCTTCCTCCGCCTCCACCTCCTCTTCAGCTTCTTCTTCATCCTCCCTCCGATTCTCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCCCCGCCCTCTCCCCCTTCCCTGACGCCTCCTCTCAAGCCTACTCCTCCCCCGCAATCCCCTCCGTCGGATAATGTGATCACATTGGAGTTTCAGCGGCTCAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTGGGCTATGTTTGGTTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCGAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGACGCGATGTACGAGGTCAATGTTGCTATATTTTTCCATTTTCTGTAATTTATGTATCTACATCATGTAATTCATCTTATAGTCTTCATGAGAGTTTTGTTGTCTGTTACACTTAATTGCCATGCAAGTGTGTGTGCTCCTTGCAATACTTTACTGTTTTTCAGTTATATATAAAAATCTTCCCCCCTTTTTTATGAGTCTGTAATTCTAATTCAGTTGGAGCATATTACCTATTCAAACCTTGCTAAAATTCTGTACCTTCATTTATTAGAGGTTCCATTTACATAATAAAAACGTTGAAACTAT

Coding sequence (CDS)

ATGTCTGGGGCTTGTTCATTCCCCTTCCCCAGTATCAAAATCCCCTCCACTTCCTCCTCACCGGCCGCCACCTCCGCTGCCGCTTCTTCCTCCGCCTCCACCTCCTCTTCAGCTTCTTCTTCATCCTCCCTCCGATTCTCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCCCCGCCCTCTCCCCCTTCCCTGACGCCTCCTCTCAAGCCTACTCCTCCCCCGCAATCCCCTCCGTCGGATAATGTGATCACATTGGAGTTTCAGCGGCTCAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTGGGCTATGTTTGGTTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCGAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGA

Protein sequence

MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQTEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIIDLE*

Homology

[Close]

BLAST of CSPI06G04730 vs. ExPASy Swiss-Prot
Match: Q9FEC1 (Light-harvesting complex-like protein OHP2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OHP2 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-44
Identity = 112/159 (70.44%), Postives = 131/159 (82.39%), Query Frame = 0


Query: 32  ASTSSSASSSSSLRFS-SSKPFLFTIRSSQTEGPLRRPSA-PSLRDPS---PPSPPSLTP 91
           +S+SSS+++SSS RFS ++KP +F IR SQTEGPLRRPSA P+LR+P    PPS PS +P
Sbjct: 16  SSSSSSSTASSSFRFSTTTKPCVFIIRCSQTEGPLRRPSAPPTLREPQKPVPPSQPSSSP 75

Query: 92  PLKPTPPPQ---SPPSDNVITLEFQRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISN 151
           P  P+PPPQ   +    +V T+EFQR KAKELQEYFKQKKL+ A QGPFFGF  KNEISN
Sbjct: 76  P--PSPPPQKAVAVDGKSVTTVEFQRQKAKELQEYFKQKKLEAAGQGPFFGFQPKNEISN 135

Query: 152 GRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIIDLE 183
           GRWAMFGFAVG+LTEYATGS+ VDQVKILLSNFGI+DLE
Sbjct: 136 GRWAMFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172

[Close]

BLAST of CSPI06G04730 vs. ExPASy TrEMBL
Match: A0A0A0KBA0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055400 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60
           MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ
Sbjct: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK 120
           TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK
Sbjct: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK 120

Query: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180
           QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID
Sbjct: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180

Query: 181 LE 183
           LE
Sbjct: 181 LE 182

[Close]

BLAST of CSPI06G04730 vs. ExPASy TrEMBL
Match: A0A1S3B3J8 (proline-rich receptor-like protein kinase PERK14 OS=Cucumis melo OX=3656 GN=LOC103485601 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.3e-75
Identity = 171/191 (89.53%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSS----SSLRFSSSKPFLFTI 60
           MSGACS PF +IKIPSTSSSPAAT++AAS SAS SSSASSS    SSLRF SSKPFLFTI
Sbjct: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFHSSKPFLFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPS-----DNVITLEFQRLK 120
           RSSQTEGPLRRPSAPSLRDPSPPSPPS TPPLKP+PP QSPPS     DNVITLEFQRLK
Sbjct: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPPSQSPPSPVLKQDNVITLEFQRLK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIIDLE 183
           LLSNFGIIDLE
Sbjct: 181 LLSNFGIIDLE 191

[Close]

BLAST of CSPI06G04730 vs. ExPASy TrEMBL
Match: A0A6J1FIC8 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445596 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.1e-69
Identity = 158/190 (83.16%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60
           MSGACS PF  IKIP+TSSSPA  S +AS+++S SSS S+ SS+RFSS+KPF+FTIRSSQ
Sbjct: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSS-SAHSSIRFSSTKPFVFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPP-QSPPS-------DNVITLEFQRLKA 120
           TEGPLRRP+APSLR+PSPPSPPS TPPLKPTPPP Q+PPS       DNVITLEFQR KA
Sbjct: 61  TEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQRQKA 120

Query: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180
           KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL
Sbjct: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180

Query: 181 LSNFGIIDLE 183
           LSNFGI+DLE
Sbjct: 181 LSNFGIVDLE 189

[Close]

BLAST of CSPI06G04730 vs. ExPASy TrEMBL
Match: A0A6J1K1U3 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489352 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 8.0e-68
Identity = 156/190 (82.11%), Postives = 168/190 (88.42%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60
           MSGACS PF  IKIP+ SSSPA  S +AS+++S SSS S+ SS+RFSSSKPF+FTIRSSQ
Sbjct: 1   MSGACSIPFAKIKIPAASSSPATASPSASATSSASSS-SAHSSIRFSSSKPFVFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPP-PQSPPS-------DNVITLEFQRLKA 120
           TEGPLRRP+APSLR+PSPPSPPS TPPLKPTPP  Q+PPS       DNVITLEFQR KA
Sbjct: 61  TEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPSSQTPPSPAYAAKLDNVITLEFQRQKA 120

Query: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180
           KELQEYFKQKKLDE DQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL
Sbjct: 121 KELQEYFKQKKLDEDDQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180

Query: 181 LSNFGIIDLE 183
           LSNFGI+DLE
Sbjct: 181 LSNFGIVDLE 189

[Close]

BLAST of CSPI06G04730 vs. ExPASy TrEMBL
Match: A0A6J1JS47 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487322 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.7e-63
Identity = 152/194 (78.35%), Postives = 165/194 (85.05%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60
           MSGACSFPF  IKIP+ SSS AA S +AS+ +STSSS S+ SS+RFSSSKPF+FTIRSSQ
Sbjct: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAVSSTSSS-SAHSSIRFSSSKPFVFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTP----PPQSPPS--------DNVITLEFQ 120
           T+GP+RRP+APSLR+PSPPSPP   PPLKPTP     P S PS        DN ITLEFQ
Sbjct: 61  TDGPIRRPAAPSLREPSPPSPP---PPLKPTPTSATAPFSQPSAKAYVAKQDNTITLEFQ 120

Query: 121 RLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           R KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIIDLE 183
           VKILLSNFGI+DL+
Sbjct: 181 VKILLSNFGIVDLD 190

[Close]

BLAST of CSPI06G04730 vs. NCBI nr
Match: XP_004140959.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucumis sativus] >KGN46119.1 hypothetical protein Csa_005015 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-85
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60
           MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ
Sbjct: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK 120
           TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK
Sbjct: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK 120

Query: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180
           QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID
Sbjct: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180

Query: 181 LE 183
           LE
Sbjct: 181 LE 182

[Close]

BLAST of CSPI06G04730 vs. NCBI nr
Match: XP_008441491.1 (PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 4.8e-75
Identity = 171/191 (89.53%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSS----SSLRFSSSKPFLFTI 60
           MSGACS PF +IKIPSTSSSPAAT++AAS SAS SSSASSS    SSLRF SSKPFLFTI
Sbjct: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFHSSKPFLFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPS-----DNVITLEFQRLK 120
           RSSQTEGPLRRPSAPSLRDPSPPSPPS TPPLKP+PP QSPPS     DNVITLEFQRLK
Sbjct: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPPSQSPPSPVLKQDNVITLEFQRLK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIIDLE 183
           LLSNFGIIDLE
Sbjct: 181 LLSNFGIIDLE 191

[Close]

BLAST of CSPI06G04730 vs. NCBI nr
Match: XP_038884716.1 (light-harvesting complex-like protein OHP2, chloroplastic [Benincasa hispida])

HSP 1 Score: 273.9 bits (699), Expect = 1.0e-69
Identity = 156/190 (82.11%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60
           MSGACS PF  IKIP  SSSPAA  + ++S++S++SS+S  +SLRFSSSKPF+FTIRSSQ
Sbjct: 1   MSGACSIPFAKIKIPPPSSSPAAAVSPSASASSSASSSSPHTSLRFSSSKPFVFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPS--------DNVITLEFQRLKA 120
           TEGPLRRP+APSLR+PSPPSP S TPPLKPTPPPQSPPS        DNVITLEFQR KA
Sbjct: 61  TEGPLRRPAAPSLREPSPPSPSSPTPPLKPTPPPQSPPSPVSPVVKQDNVITLEFQRQKA 120

Query: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180
           KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL
Sbjct: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180

Query: 181 LSNFGIIDLE 183
           LSNFGI+DLE
Sbjct: 181 LSNFGIVDLE 190

[Close]

BLAST of CSPI06G04730 vs. NCBI nr
Match: XP_023551626.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.9 bits (699), Expect = 1.0e-69
Identity = 159/190 (83.68%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60
           MSGACS PF  IKIP+TSSSPA  S +AS+++S SSS S+ SS+RFSSSKPF+FTIRSSQ
Sbjct: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSS-SAHSSIRFSSSKPFVFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPP-QSPPS-------DNVITLEFQRLKA 120
           TEGPLRRP+APSLR+PSPPSPPS TPPLKPTPPP Q+PPS       DNVITLEFQR KA
Sbjct: 61  TEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQRQKA 120

Query: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180
           KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL
Sbjct: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180

Query: 181 LSNFGIIDLE 183
           LSNFGI+DLE
Sbjct: 181 LSNFGIVDLE 189

[Close]

BLAST of CSPI06G04730 vs. NCBI nr
Match: XP_022939849.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 272.7 bits (696), Expect = 2.3e-69
Identity = 158/190 (83.16%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60
           MSGACS PF  IKIP+TSSSPA  S +AS+++S SSS S+ SS+RFSS+KPF+FTIRSSQ
Sbjct: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSS-SAHSSIRFSSTKPFVFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPP-QSPPS-------DNVITLEFQRLKA 120
           TEGPLRRP+APSLR+PSPPSPPS TPPLKPTPPP Q+PPS       DNVITLEFQR KA
Sbjct: 61  TEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQRQKA 120

Query: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180
           KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL
Sbjct: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180

Query: 181 LSNFGIIDLE 183
           LSNFGI+DLE
Sbjct: 181 LSNFGIVDLE 189

[Close]

BLAST of CSPI06G04730 vs. TAIR 10
Match: AT1G34000.1 (one-helix protein 2 )

HSP 1 Score: 181.0 bits (458), Expect = 8.5e-46
Identity = 112/159 (70.44%), Postives = 131/159 (82.39%), Query Frame = 0


Query: 32  ASTSSSASSSSSLRFS-SSKPFLFTIRSSQTEGPLRRPSA-PSLRDPS---PPSPPSLTP 91
           +S+SSS+++SSS RFS ++KP +F IR SQTEGPLRRPSA P+LR+P    PPS PS +P
Sbjct: 16  SSSSSSSTASSSFRFSTTTKPCVFIIRCSQTEGPLRRPSAPPTLREPQKPVPPSQPSSSP 75

Query: 92  PLKPTPPPQ---SPPSDNVITLEFQRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISN 151
           P  P+PPPQ   +    +V T+EFQR KAKELQEYFKQKKL+ A QGPFFGF  KNEISN
Sbjct: 76  P--PSPPPQKAVAVDGKSVTTVEFQRQKAKELQEYFKQKKLEAAGQGPFFGFQPKNEISN 135

Query: 152 GRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIIDLE 183
           GRWAMFGFAVG+LTEYATGS+ VDQVKILLSNFGI+DLE
Sbjct: 136 GRWAMFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172

The following BLAST results are available for this feature:

BLAST of CSPI06G04730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FEC1	1.2e-44	70.44	Light-harvesting complex-like protein OHP2, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of CSPI06G04730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBA0	1.4e-85	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055400 PE=4 SV=1	[more]
A0A1S3B3J8	2.3e-75	89.53	proline-rich receptor-like protein kinase PERK14 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1FIC8	1.1e-69	83.16	light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata ...	[more]
A0A6J1K1U3	8.0e-68	82.11	light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX...	[more]
A0A6J1JS47	2.7e-63	78.35	light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX...	[more]

BLAST of CSPI06G04730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140959.1	3.0e-85	100.00	light-harvesting complex-like protein OHP2, chloroplastic [Cucumis sativus] >KGN...	[more]
XP_008441491.1	4.8e-75	89.53	PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis melo]	[more]
XP_038884716.1	1.0e-69	82.11	light-harvesting complex-like protein OHP2, chloroplastic [Benincasa hispida]	[more]
XP_023551626.1	1.0e-69	83.68	light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp....	[more]
XP_022939849.1	2.3e-69	83.16	light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata]	[more]

BLAST of CSPI06G04730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34000.1	8.5e-46	70.44	one-helix protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 95..177 e-value: 4.4E-5 score: 25.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..101
None	No IPR available	PANTHER	PTHR14154:SF83	MYB-LIKE PROTEIN U	coord: 7..181
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 7..181
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 128..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G04730.1	CSPI06G04730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006850	mitochondrial pyruvate transmembrane transport
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0050833	pyruvate transmembrane transporter activity