CSPI06G04560 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G04560
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DEAD-box ATP-dependent RNA helicase 39-like
Location	Chr6: 4159197 .. 4165786 (+)
RNA-Seq Expression	CSPI06G04560
Synteny	CSPI06G04560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTACAAATTGAGTTCGACTTGGGGGCAGGGCTAACTTCCGAACTCCGAACGGCACCGCCATGGGAAGCAGAAGAAAAGCTATTCTCGAGTTCTCTCACTGCGCAAACATCCTTCTATCTCCAACGAAACGCTCTATTTTCCCCAACTCCACACTCTCCACAAACGCATTTTTAGCTTCTCAATTTTGTTCTTCTACCTTTTCCAGATCCTCCACCGATGGCACTCCCGTGGAAAATGAGCAGCCGCGGCAATCGAACAGAGATTCGACGCTTCTTGAAAAGTTCAGGCTCAGAAAACTCAAAGGCTTGTCGAAAATCTCGCAAGATTCACCGAGTTCTAACGGAGGTGAGAAGGCGATGACAGGTTTCAGGGACTTAGGGCTTTGCAATGAATTGGGCGAGGCTGTAGAAAAAATGGGAGTTTTGGCTCCTTCCGAGTTGGATTGTGCAGGGATTCCAGCTGTTTTGGAAGGAAAGAATGTGGTGTTTGGATATCTTGATGAACCCGAAAGGGCTTTGGCTTACTTGCTGCCTCTCATACAGGTTCTTTTTTTTTGTTCATTTGAATACATTCAATCCTTTGGCACTTTCTTTAGCAGAACCAATGATGGCTTTGAGTTCATAGTATCAATCAGAAGTGTACTTGGTGTGGATATCCGAATATTTCTGGACTAGAATTACCTTTAAGTTGATTTTTGTAGGAGTTTTGATCGTGACTGTTAAACGGTAGAAATGAGAACACGTCGAAACCCTAGAACAGGGAGAAAAAAATCAGTTTCTTTTATTATTTTCACACACCATGAAAATTACAAGCCCTAACAAAAGAAAAAGAAAAAACGAAATAAACTTAAGGTAAAGTAAAATACTAAAATACTCTCGGGACTATGAACTATCAACAAAGTTTTGAAATGATTTGTGGACTTAGGCTCATAAGCAAAGAACAATGTTTGTCCCACATTGGAGAATTTTGATGCCAAGAGGGTATAAATACCAAGACATGCTATGTGCGAGATTAAAATCTGTTGGTGGTGATGGGATAACCTTGTCGATACATGTACCACTCTACTACCAACCACTCTTGCGCGAGAATGAAATAATTTTATTATAACCGATGATTTTCTTCCTCTTTATTATCATCTTCTTCATTCTAGATATGGGCATTCAAAACCAGATCTCTCTTTGTTCTATTATGTTATGAGCTTGTTCTTCATCTCAATTCTATTCCTTATTCCGAGAGTGCACCTCGGAATAGGGGAGTTGTGTTAACCTTAGCGAGCAACCAACATCTCAATTGGTACCACAGTCATGCTTACTGATGTTGAACAGAAATACCAATGTCCTTTCTGATATGTCCAAACTTGAACCACTTGATGGAGCAAACTACCGCCACTAGTCTCAGAAATTGTTGATTTTTTTCGAGCAGCCGGAGGTTGATTATGTGCTTACCATAGAGTCATCGTCTGATACTGAAAATGCAGCAACTGTTTCTAAACCAGAATCATCTAAGGGACCTCCTACTGCTTTTGATCAATTGAAGCCGACCCCTACAAATCGATCCTGATAAATATGAGAAGGACAATAGGATAGTTCGCGACCACTTGCTAAATCACATGGCAGATGAGATGTTCGATTTGTTTGTGACCCAAAAATCCGCCTAGGTAATCTGGAGTATGTTGGAATCATGGTATAGTGGAGATATGCCAACCGTAAGAAATATTTTGTTGGAAAATGGCTTCAATTTCAGATGACAGATGACAAACTTGTGGTGGAACAAATTCATGAGTATGAAAATTTTATGTCAAATGTATTATTCGGAGGAATGACGGTTGCTAAGTTTTGGATTATCTGATAATATGTGGGGGGAAGCAATGCTTTCTGCATGTTTTATTCTCAACAAGGTATCTCAAAGAAATCTAGATAAAACTTCTTATGAACTCTAGAAAGGCTATGCACCTAATCTCACTTACTTGAGGGTTTAGGGATGCTTGGCTAAGGTACCATATCCTGTATTCAAGAAACCTATGGTAGGATCTAAAACCTTTGATTTTGTGTTTATTGGCTATGCTCAAAACAGTGCTGTATATAGATTCATGTGCTGGAATGAAATATTCATATATGATCATAGGGATGCAGAACTTTCTAAACACATTTTTCCTTTGAAAAGGGAAATTAAATATCTGTCTGTTTCTATTCCTTTTTCGTCTGATAGCATGCATGAAATTGGAAATAACATAGCTTGTAGAATTTTTTTTGAAATTGTTAATACTTCTGGTGTAATGCTTGAAATAGAACCTGGAAGGAGTAAAAGACAGAGATTAAGTAGATACACACCTAATAAGGATCACTGGATTGTTCTTCATTGTTTGTTGAGATATCTTAAAGGCACGATAAACTACTGTTTGTACTATAACAAATTTTCCGTTGTATTAGATGGTTAATGTGATGCAAACTGGGTTACAGATAATGACGAGATCTACTCTACTGGTGGTTGTATGTTTTTACTCGGAGGTGGAGCAATATCATGAAAGTCTGCAAAACAAACTTGCATAGCTAAATCCACTATAGAACATGAATTTATTGCTCTAGAATTGGTAGGACAAGAGGCTGAGTGGATTAAAAGCCTACTAGAAGATACATTTGTGGGGGACATCTGTACCGGTCTCTATACACTATGATTCACAGGTTGCCATATGTATTGCCAAGAATAGTGTTTATAATGGCAAAAGAAGACATATACGTCTTAGACATGGAGCTGTGAAACAATTGTTAAAGGAAAGAACTATTTCCTTAGAATATGTTAGGTCTAAGAACTTGGCTGATCCTTTAACCAAAGGACTAACTAGAAAAATAGTTCTAGACTCCTATGTGAACATGGGGCTGAAACCTTACAGCGATTCATAGCACTTGATTTGGGTGGTCTATTGCAATAGACTTGATGGTCCATAACCCCTTTTCTGATTGGTCTATTGCGATAGACTTAATGGTTCATGGCCCATTGTGTGGGTAGTCCTTAGATGGACTTGATGTATGATAATAAAACCTTTTGAATGTTCCATAATCTTTAATGGATGGTGATGAATTCTTCGTAGCTCATTTTGAGTGGTTTGTTTGAACAAACTTGATGAAGTATACAACGTGATAGTGAATGTGTGGTCTTCTTTTATGAAAAAGTTTGAAAGTCTCTTTCTAGAGCTTTCACGATGACCCGAGGTTTATGTGCATGGCCATAATAGGCACAAATCTATATTGCAAAATCAAGAAAAGACTTAGGATTAAAACGTGTTGTGGGGGTCTCATCCAGTGTTATTGAAAGTGCAAGAGGTAACTCACTCTCTCTAACAAGGTTGTTGCCTTGCTTCACTACGCATCAATTCAAATTAGTAGAAATTGTTGCTGATGTCCTATCTTAGCTCATAACATAATTTTCAAAACTTGTTTTCATCTGTCTATTTGTTATCTTTGCCGTAACAGCCATTTGTGGGGGATTGTTGGAAATGACTTGTGGGCTTGAACAATGTTTTGTCCCGCATTGGAGAATTTTGAAATGGCAAGAGGGTATACAATACCAAGGCATGCAAGGTGTGAGACTAAAATGTGTTGGTGGTGATAACACTTTCACCACATGCACACCGCTGTCACCCTCCGTCCGGTCGAGTAACCACGCTTGCGCGAAAAGGAAATAATTTGATGGTATACTTTGTAATTATTATTTCTACCCATTGGAAAACCCTAGTCAGCGGTTTTTCTTTTCTTCCTCTTTATCTATCTTCTTCTTCATTCCAGATTGGCATTCAAAACCAGATCTCTCTTTGTTGGGCTCTAATTAGACACAAAATTTGTAGTTTGAGGACCTTTTACATACTTGTGAAATTTTTTTCTTTTTTAGTACAAATGATTGTGGGGACGAAGGATCAAGTCTTCCACCTCTAGAATGGAAGCTCAAGTTTAGTACTGCTAAGCTAACCTCACTTTTGAAAGTAGGACTAAAGCTTGTGCAGTTGAATTATGTGTGATTGAACATTAATTTGACTAATGAGACTCCATGTATGGAATATTAAAATGAAACATGGTAGAAAATTAGAAATTACATTGGGAAGTTTGAACTTTTTGTTCTTTTAGCCATGGGTGGGGAATCGTAATTCTTAACTATATAATGCTTTAAGCACTTGACTTATTCTCAGATTGGTAGGAAGTTTGAAGTTAACCTAATGCCGTGTTAAATTTACATTAAACCCTTTTGCTTTTAGGTTAATAAGCTAGAATAAACATCTTTTAGTATGCTCGTTATTTTCATTCCCTGTTCTTGAATTGTAAAATTTTTATCGTGGCTTTGCAGTCTCCTCCCACACCTCTTAATTGATCTACTCTTGGAGTAATTTGAATTTTGATTTACCATCTAAATTTGAAGAATGTACAATACTGAAAGTCTAAAATGCTGTCTTCTCTGTCAATTTATTTTTTCGCTTTTGTGTGTCTATCAGAATCTAAAAAGGGATGAAAAAAGGTATGGAACAAGGTCCAAGCATCCTCGAGCGTTTGTTATGTGCCCAACTGCGCAGCTATCTGAAGAGGTATTATCACTTTCTCAGACCTTCATGAATAAGATGTTAAGATCAACTACAATTTAGCTGACATAGGATACCCTGCAGTTGTTTTGTATGGCCAAATACTTCAGCAATTACAGGCAGCTCAAAACTCCAAGGGATAATGGTTGTGGTGAATTAGAGCTTCAGAAAAGTGCATCCGATGTCTCAATCGGTTTGTTAATTGGCACCCCTGATGAAATCTCCGAACTCATTGAGGATGGTAGTGTGGTTCTTGACGAAATCAATTACTTGGTGTGTGGTGAAATATTCATACGGCATCCTCTTTAAATATATTTTTATTTACCTTTTTTCTTTGACGGTAATTGATAATTTGGTGTGATATAATACAATTTTTAATTGTTTTTATTATTATTTTTTAAAAAAAATCTGTTCCTTGCTCTGGTCTGGCTGAGATGGAATATCTTTTAGCTTTCCTTCCAATTATAGCCTCATCAACTCAAGAACTGTTTGATGGATTGTCCCTTGTTATTTTTAAATCTTTACTATGTTTATAAGACAAGAAATTATTTGTGTATCTGAGTTCTTAATCTTACGAAACCGTCAATATTGGCATTTTATATAATGTTTTTATAATTTTCCTTGTTAAAACAGGTATTTGATGAGTTGGATTCAATGTTCGATCTTGGTTTTGGCCCCAACATTAAAAAGATTTTAACTTCAGTAAGGAACTGCAATAAAAAGTGTCAATCCATTGTGGTTACTTCGACATTGATAAAGGTTATTTGGTCTACTCTCTCTTATTTGACATAGAACTTTTGTGCGTTTAGGTTCTTAACTTTTTCTTGAGTTAACAAATTGTGTTGTAAATTGTAGATGATGCATGAACAACGTTCATCCCTTGTCAAGTCTCTTAGGTGTGGTGATGCGGGAGAGATTGCTGCTATGGTTCTAGAAATTGAGGAAGAAGAGGCATTCCATCTTATGGAATCTCCAGATGCTCTGAAATCTAAACTTGCTGATGTGGTCGAGTCACTTCGTCCATCTACACAGGAAACTTAAAATTTGATAAATACTTGTTTTGGACGATTGCAAATAACTTTTTAACGTCATCATATCTACGTTTACAATCATCAGCCGGTTCTTTCTTAAGATTATGTCAAATGAACAGCTGTTTTCATGGGTTGGTGATACAATTATCATTTTCATTTCAAGTCTGCATACAATCCAGGGGGTTGAAAGATACAAATCTGCATACAGTGATAAGCTCTTGGAGATGACAGGAAAACAAATGAAAAAGATAAATTTCAAGCTGCATAACTTATCCTTGGCTTTTTGCCTTGTAATTTTGAATAGATCTCTTCACTTCCAGGTTAGTAAAGGACGCGGAGTTTTGGCAGGGGTTACAGCATTTCCATTGGGGTCGTATAATATGACTCCTGAGAAGTCCGGTAGCTGGCATTTCCCACCCATGAGAATGTTCTTGTGCCACATAGAAGCTTGTTGCTCTCTACTGAAGAACATCTCATCATTGCCATTCTCCGGCTCGGTGGTATTCACTCGTTGCGTAGTCACAACTGTTGCTTCTTGGTTCAACTCTATGACAGGATCCTCAAACTCATATCCATAATCCAAGCAAGCATTCCAACGGCGACGCCATTTTCGGGCATGGGAAGCACACATGAACAATGCAAAAGCACAGAGGAGAAGGCTCACACCAGCCATGCCAACCTGGGCTGTGCCTTGTGAAGAATGTATGATTTGCAGTTGCCTTGCCATCTTGGGGTAATTTCTAAGCTTCTTTTTTCTGAAACAATTAGAAAGTTTGTTTTTGTCTGAAGACTTGTTATGAAGGGATCACTAATTTATACAAGTTTTGAAGTGGAGCTGTTGGTTTTTGAGGTTTTGTTGACCTGATTTGTGGTTTTGGTGATCATTTTCCACTCACAAGATTGTGATTTAAGTTTGCAATCTTTGAGAATGAGAACTAACTTTGGATTATTTTATAAACTCAACTTTTACAAATTTATTAATAGTTGACTGTTA

mRNA sequence

GTTACAAATTGAGTTCGACTTGGGGGCAGGGCTAACTTCCGAACTCCGAACGGCACCGCCATGGGAAGCAGAAGAAAAGCTATTCTCGAGTTCTCTCACTGCGCAAACATCCTTCTATCTCCAACGAAACGCTCTATTTTCCCCAACTCCACACTCTCCACAAACGCATTTTTAGCTTCTCAATTTTGTTCTTCTACCTTTTCCAGATCCTCCACCGATGGCACTCCCGTGGAAAATGAGCAGCCGCGGCAATCGAACAGAGATTCGACGCTTCTTGAAAAGTTCAGGCTCAGAAAACTCAAAGGCTTGTCGAAAATCTCGCAAGATTCACCGAGTTCTAACGGAGGTGAGAAGGCGATGACAGGTTTCAGGGACTTAGGGCTTTGCAATGAATTGGGCGAGGCTGTAGAAAAAATGGGAGTTTTGGCTCCTTCCGAGTTGGATTGTGCAGGGATTCCAGCTGTTTTGGAAGGAAAGAATGTGGTGTTTGGATATCTTGATGAACCCGAAAGGGCTTTGGCTTACTTGCTGCCTCTCATACAGAATCTAAAAAGGGATGAAAAAAGGTATGGAACAAGGTCCAAGCATCCTCGAGCGTTTGTTATGTGCCCAACTGCGCAGCTATCTGAAGAGTTGTTTTGTATGGCCAAATACTTCAGCAATTACAGGCAGCTCAAAACTCCAAGGGATAATGGTTGTGGTGAATTAGAGCTTCAGAAAAGTGCATCCGATGTCTCAATCGGTTTGTTAATTGGCACCCCTGATGAAATCTCCGAACTCATTGAGGATGGTAGTGTGGTTCTTGACGAAATCAATTACTTGGTATTTGATGAGTTGGATTCAATGTTCGATCTTGGTTTTGGCCCCAACATTAAAAAGATTTTAACTTCAGTAAGGAACTGCAATAAAAAGTGTCAATCCATTGTGGTTACTTCGACATTGATAAAGATGATGCATGAACAACGTTCATCCCTTGTCAAGTCTCTTAGGTGTGGTGATGCGGGAGAGATTGCTGCTATGGTTCTAGAAATTGAGGAAGAAGAGGCATTCCATCTTATGGAATCTCCAGATGCTCTGAAATCTAAACTTGCTGATGTGGTCGAGTCACTTCGTCCATCTACACAGGAAACTTAAAATTTGATAAATACTTGTTTTGGACGATTGCAAATAACTTTTTAACGTCATCATATCTACGTTTACAATCATCAGCCGGTTCTTTCTTAAGATTATGTCAAATGAACAGCTGTTTTCATGGGTTGGTGATACAATTATCATTTTCATTTCAAGTCTGCATACAATCCAGGGGGTTGAAAGATACAAATCTGCATACAGTGATAAGCTCTTGGAGATGACAGGAAAACAAATGAAAAAGATAAATTTCAAGCTGCATAACTTATCCTTGGCTTTTTGCCTTGTAATTTTGAATAGATCTCTTCACTTCCAGGTTAGTAAAGGACGCGGAGTTTTGGCAGGGGTTACAGCATTTCCATTGGGGTCGTATAATATGACTCCTGAGAAGTCCGGTAGCTGGCATTTCCCACCCATGAGAATGTTCTTGTGCCACATAGAAGCTTGTTGCTCTCTACTGAAGAACATCTCATCATTGCCATTCTCCGGCTCGGTGGTATTCACTCGTTGCGTAGTCACAACTGTTGCTTCTTGGTTCAACTCTATGACAGGATCCTCAAACTCATATCCATAATCCAAGCAAGCATTCCAACGGCGACGCCATTTTCGGGCATGGGAAGCACACATGAACAATGCAAAAGCACAGAGGAGAAGGCTCACACCAGCCATGCCAACCTGGGCTGTGCCTTGTGAAGAATGTATGATTTGCAGTTGCCTTGCCATCTTGGGGTAATTTCTAAGCTTCTTTTTTCTGAAACAATTAGAAAGTTTGTTTTTGTCTGAAGACTTGTTATGAAGGGATCACTAATTTATACAAGTTTTGAAGTGGAGCTGTTGGTTTTTGAGGTTTTGTTGACCTGATTTGTGGTTTTGGTGATCATTTTCCACTCACAAGATTGTGATTTAAGTTTGCAATCTTTGAGAATGAGAACTAACTTTGGATTATTTTATAAACTCAACTTTTACAAATTTATTAATAGTTGACTGTTA

Coding sequence (CDS)

ATGGGAAGCAGAAGAAAAGCTATTCTCGAGTTCTCTCACTGCGCAAACATCCTTCTATCTCCAACGAAACGCTCTATTTTCCCCAACTCCACACTCTCCACAAACGCATTTTTAGCTTCTCAATTTTGTTCTTCTACCTTTTCCAGATCCTCCACCGATGGCACTCCCGTGGAAAATGAGCAGCCGCGGCAATCGAACAGAGATTCGACGCTTCTTGAAAAGTTCAGGCTCAGAAAACTCAAAGGCTTGTCGAAAATCTCGCAAGATTCACCGAGTTCTAACGGAGGTGAGAAGGCGATGACAGGTTTCAGGGACTTAGGGCTTTGCAATGAATTGGGCGAGGCTGTAGAAAAAATGGGAGTTTTGGCTCCTTCCGAGTTGGATTGTGCAGGGATTCCAGCTGTTTTGGAAGGAAAGAATGTGGTGTTTGGATATCTTGATGAACCCGAAAGGGCTTTGGCTTACTTGCTGCCTCTCATACAGAATCTAAAAAGGGATGAAAAAAGGTATGGAACAAGGTCCAAGCATCCTCGAGCGTTTGTTATGTGCCCAACTGCGCAGCTATCTGAAGAGTTGTTTTGTATGGCCAAATACTTCAGCAATTACAGGCAGCTCAAAACTCCAAGGGATAATGGTTGTGGTGAATTAGAGCTTCAGAAAAGTGCATCCGATGTCTCAATCGGTTTGTTAATTGGCACCCCTGATGAAATCTCCGAACTCATTGAGGATGGTAGTGTGGTTCTTGACGAAATCAATTACTTGGTATTTGATGAGTTGGATTCAATGTTCGATCTTGGTTTTGGCCCCAACATTAAAAAGATTTTAACTTCAGTAAGGAACTGCAATAAAAAGTGTCAATCCATTGTGGTTACTTCGACATTGATAAAGATGATGCATGAACAACGTTCATCCCTTGTCAAGTCTCTTAGGTGTGGTGATGCGGGAGAGATTGCTGCTATGGTTCTAGAAATTGAGGAAGAAGAGGCATTCCATCTTATGGAATCTCCAGATGCTCTGAAATCTAAACTTGCTGATGTGGTCGAGTCACTTCGTCCATCTACACAGGAAACTTAA

Protein sequence

MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENEQPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISELIEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET*

Homology

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BLAST of CSPI06G04560 vs. ExPASy Swiss-Prot
Match: Q5VRY0 (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.9e-39
Identity = 100/290 (34.48%), Postives = 165/290 (56.90%), Query Frame = 0


Query: 36  AFLASQFCSSTFSRSSTDGTPVENEQPRQS--NRDSTLLEKFRLRKLKGL----SKISQD 95
           A LA+   ++T + +S    P E E   +   +R   LLE+ R R LKG+     + +Q 
Sbjct: 27  AALATTTTTTTAAGASAVTAPTEPETTAREAPSRHELLLERLRQRHLKGVPAATPRPAQR 86

Query: 96  SPSSNGG------------EKAMTGFRDLGLCNELGEAVEKMGVLAPSELDCAGIPAVLE 155
                GG             + +  F +LGL  E+  A+ +MG+  P+E+ C G+PAVL 
Sbjct: 87  EKGRGGGGGGAQELQQKRRVEVVDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLA 146

Query: 156 GKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYG--TRSKHPRAFVMCPTAQLSEELFCM 215
           G +VV G      + LAYLLPL+Q L+RDE   G   + + PRA V+CPT +L+E++F +
Sbjct: 147 GTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRV 206

Query: 216 AKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISELIEDGSVVLDEINYLV 275
           AK  S++ + ++   +G   +  Q+ + ++ + +++GTP  I + I+DG++V  +I YLV
Sbjct: 207 AKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLV 266

Query: 276 FDELDSMFDLGFGPNIKKILTSVRNCNKK-----CQSIVVTSTLIKMMHE 301
            DE D+MFD GFGP+I+K L  ++N   K      Q+++VT+T+ K + +
Sbjct: 267 LDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQK 316

[Close]

BLAST of CSPI06G04560 vs. ExPASy Swiss-Prot
Match: Q56X76 (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 3.3e-38
Identity = 95/278 (34.17%), Postives = 164/278 (58.99%), Query Frame = 0


Query: 35  NAFLASQFCSSTFSRSSTDGTPVENEQPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSN 94
           +AF      ++T S  +T+    + +Q +     + LLE+ RLR LK  +K  Q  PSS 
Sbjct: 39  HAFRPLYSAAATTSSPTTETNVTDPDQLKH----TILLERLRLRHLKESAKPPQQRPSSV 98

Query: 95  GG-----------EKAMTGFRDLGLCNELGEAVEKMGVLAPSELDCAGIPAVLEGKNVVF 154
            G           +K +  F++LGL  E+  A++++ +  P+E+ C GIPAV+E K+VV 
Sbjct: 99  VGVEEESSIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVL 158

Query: 155 GYLDEPERALAYLLPLIQNLKRDEKRYG--TRSKHPRAFVMCPTAQLSEELFCMAKYFSN 214
           G      + LAYLLP++Q ++ DE   G  T+ + PR  V+CPT +LSE+++ +AK  S+
Sbjct: 159 GSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISH 218

Query: 215 YRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISELIEDGSVVLDEINYLVFDELDS 274
           + + ++   +G   +  Q+ + + +I +++GTP  I + IE+G++V  +I YLV DE D+
Sbjct: 219 HARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADT 278

Query: 275 MFDLGFGPNIKKILT-----SVRNCNKKCQSIVVTSTL 295
           MFD GFGP I+K L      +++  ++  Q+++VT+T+
Sbjct: 279 MFDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATM 312

[Close]

BLAST of CSPI06G04560 vs. ExPASy Swiss-Prot
Match: Q8TDD1 (ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 4.1e-17
Identity = 55/209 (26.32%), Postives = 105/209 (50.24%), Query Frame = 0


Query: 92  SSNGGEKAMTGFRDLGLCNELGEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLDEPER 151
           + N  +K   GF+ +GL   + + + K G   P+ +    IP +L+GK+VV        +
Sbjct: 87  AQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGK 146

Query: 152 ALAYLLPLIQNLKRDEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLKTPRDN 211
              +LLP+ + LK    + G      RA ++ PT +L+ +     K    +  LKT    
Sbjct: 147 TACFLLPMFERLKTHSAQTGA-----RALILSPTRELALQTLKFTKELGKFTGLKTALIL 206

Query: 212 GCGELELQKSASDVSIGLLIGTPDEISELIEDGSVVLDEINYLVFDELDSMFDLGFGPNI 271
           G   +E Q +A   +  ++I TP  +  +  + S+ L  + Y+VFDE D +F++GF   +
Sbjct: 207 GGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQL 266

Query: 272 KKILTSVRNCNKKCQSIVVTSTLIKMMHE 301
           ++I+  +   +   Q+++ ++TL K++ E
Sbjct: 267 QEIIARLPGGH---QTVLFSATLPKLLVE 287

[Close]

BLAST of CSPI06G04560 vs. ExPASy Swiss-Prot
Match: Q4HZ42 (ATP-dependent RNA helicase DBP10 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP10 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.2e-17
Identity = 62/211 (29.38%), Postives = 106/211 (50.24%), Query Frame = 0


Query: 102 GFRDLGLCNELGEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQ 161
           GF+ +GL N L +A+ + G   P+ +    IP +L+ K++V        +  A+++P+I+
Sbjct: 83  GFQAMGLNNNLLKAITRKGFSVPTPIQRKAIPLILDRKDLVGMARTGSGKTAAFVIPMIE 142

Query: 162 NLKRDEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKS 221
            L+    R+GT     RA +M P+ +L+ +   + K FS    LK     G   LE Q  
Sbjct: 143 KLRAHSARFGT-----RALIMSPSRELAIQTLKVVKEFSRGTDLKCVLLVGGDSLEEQFG 202

Query: 222 ASDVSIGLLIGTPDEISELIEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNC 281
               +  ++I TP     L  + S+ L  I Y+VFDE D +F++GF   + +IL ++   
Sbjct: 203 YMAANPDIVIATPGRFLHLKVEMSLDLSSIKYVVFDEADRLFEMGFAAQLTEILHALPPS 262

Query: 282 NKKCQSIVVTSTLIKMMHEQRSSLVKSLRCG 313
               QS++ ++TL        +SLV+  R G
Sbjct: 263 R---QSLLFSATL-------PASLVEFARAG 278

[Close]

BLAST of CSPI06G04560 vs. ExPASy Swiss-Prot
Match: A1CHL3 (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) OX=344612 GN=prp28 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.2e-17
Identity = 75/283 (26.50%), Postives = 126/283 (44.52%), Query Frame = 0


Query: 92  SSNGGE--KAMTGFRDLGLCNELGEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLDEP 151
           S+ GG     M  + + GL   L E V+++G   P+ +  A IP  L+ ++++   +   
Sbjct: 355 STKGGSVPNPMRSWEESGLPKRLLELVDRVGYKEPTPIQRAAIPIALQSRDLIGVAVTGS 414

Query: 152 ERALAYLLPL---IQNLKRDEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLK 211
            +  ++LLPL   I  L R ++    ++  P A V+ PT +L++++   AK F+      
Sbjct: 415 GKTASFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTQPLGFN 474

Query: 212 TPRDNGCGELELQKSASDVSIGLLIGTPDEISELIEDGSVVLDEINYLVFDELDSMFDLG 271
                G   LE Q  +      ++I TP  + + IE   +VL +  Y++ DE D M DLG
Sbjct: 475 VVSIVGGHSLEEQAYSLRNGAEIIIATPGRLVDCIERRILVLSQCCYIIMDEADRMIDLG 534

Query: 272 FGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHEQRSSLV--------------KSLR-- 331
           F   + KIL ++   N+K  S    ++     H  R +++              K LR  
Sbjct: 535 FEEPVNKILDALPVTNEKPDSDEAENSAAMRSHRYRQTMMYTATMPSAVERIARKYLRRP 594

Query: 332 ----CGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVES 350
                G AGE    V     E+   L+   D  K +LAD++ S
Sbjct: 595 AIVTIGSAGEAVDTV-----EQRVELIAGEDKRKKRLADILSS 632

[Close]

BLAST of CSPI06G04560 vs. ExPASy TrEMBL
Match: A0A0A0KB87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052790 PE=4 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 2.7e-197
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60
           MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE
Sbjct: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60

Query: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMG 120
           QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMG
Sbjct: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMG 120

Query: 121 VLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
           VLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF
Sbjct: 121 VLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISEL 240
           VMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISEL
Sbjct: 181 VMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHE 300
           IEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHE
Sbjct: 241 IEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHE 300

Query: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET
Sbjct: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 357

[Close]

BLAST of CSPI06G04560 vs. ExPASy TrEMBL
Match: A0A5A7SLY8 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G003970 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 3.0e-180
Identity = 329/357 (92.16%), Postives = 338/357 (94.68%), Query Frame = 0


Query: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60
           MGSRRKA+LE SHCANILLSPTKRSIFPN  LS NA LAS FCSSTFSRSS DGTPVEN+
Sbjct: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFALSANALLASPFCSSTFSRSSADGTPVEND 60

Query: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMG 120
           QP QSNRDSTLLEKFRLRKLKGLSKISQ S SSNGGEK MTGFR LGLCNEL  AVE+MG
Sbjct: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120

Query: 121 VLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
           +LAPSELDCA IPAVLEGKNVV GYL+ PERALAYLLPLIQNLKRDEKRYGTRSKHPRAF
Sbjct: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISEL 240
           VMCPTAQLSEELFCMAKY SNYRQLKTPRDN CGELELQKSASDVSIGLLIGTPDEISEL
Sbjct: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHE 300
           IE+GSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVR+CN+KC+SIVVTSTLIKMMHE
Sbjct: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE 300

Query: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET
Sbjct: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 357

[Close]

BLAST of CSPI06G04560 vs. ExPASy TrEMBL
Match: A0A1S3C4L0 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo OX=3656 GN=LOC103496581 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 3.0e-180
Identity = 329/357 (92.16%), Postives = 338/357 (94.68%), Query Frame = 0


Query: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60
           MGSRRKA+LE SHCANILLSPTKRSIFPN  LS NA LAS FCSSTFSRSS DGTPVEN+
Sbjct: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFALSANALLASPFCSSTFSRSSADGTPVEND 60

Query: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMG 120
           QP QSNRDSTLLEKFRLRKLKGLSKISQ S SSNGGEK MTGFR LGLCNEL  AVE+MG
Sbjct: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120

Query: 121 VLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
           +LAPSELDCA IPAVLEGKNVV GYL+ PERALAYLLPLIQNLKRDEKRYGTRSKHPRAF
Sbjct: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISEL 240
           VMCPTAQLSEELFCMAKY SNYRQLKTPRDN CGELELQKSASDVSIGLLIGTPDEISEL
Sbjct: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHE 300
           IE+GSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVR+CN+KC+SIVVTSTLIKMMHE
Sbjct: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE 300

Query: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET
Sbjct: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 357

[Close]

BLAST of CSPI06G04560 vs. ExPASy TrEMBL
Match: A0A6J1H541 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460659 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 8.4e-130
Identity = 256/370 (69.19%), Postives = 293/370 (79.19%), Query Frame = 0


Query: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60
           MGSRRKA+LE  H  N L  PTK ++F N   STNAFLAS++ SS+FSR+ T     EN+
Sbjct: 1   MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRYFSSSFSRTLT----TEND 60

Query: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSS--------NGGEKAMTGFRDLGLCNEL 120
           +P +++R++ LLEKFR RKLKG S IS++S SS        NGGEK MTGF++LGL NE+
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 GEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGT 180
            EA E MG   PSEL C GIPA+LEGKNVV G L  PERALAYLLPLIQNLKRD K  G 
Sbjct: 121 AEAAEGMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGV 180

Query: 181 RSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIG 240
           RSKHPRAFVMC T +LS+E+F MAK+ SNY+QLKT +DNG G+LELQ  ASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGQLELQNGASDVSIGLLIG 240

Query: 241 TPDEISELIEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSV-----RNCNKKCQS 300
           TP+E+SELIEDGSVV DEI YLV DELD+MFDLGFGPNIKKILTSV     R+CN+KCQS
Sbjct: 241 TPNEVSELIEDGSVVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 IVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVV 358
           +VVTSTLIKM+HEQ SSLV+SL+  D GEIAAM+LEIEEEEAFHLMESPD LK KLAD V
Sbjct: 301 VVVTSTLIKMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

[Close]

BLAST of CSPI06G04560 vs. ExPASy TrEMBL
Match: A0A6J1JT03 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita maxima OX=3661 GN=LOC111487576 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 2.4e-129
Identity = 255/370 (68.92%), Postives = 293/370 (79.19%), Query Frame = 0


Query: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60
           MGSRRKA+LE SH  N L  PTKRS F N  +S NAFLAS++ SS+FSR+S      EN+
Sbjct: 1   MGSRRKALLELSHYLNSLSCPTKRSSFHNPVISLNAFLASRYFSSSFSRTS----ETEND 60

Query: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSS--------NGGEKAMTGFRDLGLCNEL 120
           +P +++R++ LLEKFR RKLKG S IS++S SS        NGGEK MTGF++LGL NE+
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 GEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGT 180
            EA E MG   PSEL C GIPA+LEGKNVV G L  PERAL YLLPLIQNLKRD K  G 
Sbjct: 121 AEAAEGMGFFVPSELLCVGIPALLEGKNVVLGSLYGPERALTYLLPLIQNLKRDAKSNGV 180

Query: 181 RSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIG 240
           RSKHPRAFVMC T +LS+E+F MAK+ SNY+QLKT +DNG G+LELQ  ASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGKLELQNGASDVSIGLLIG 240

Query: 241 TPDEISELIEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSV-----RNCNKKCQS 300
           TP+E+SELIEDGS+V DEI YLV DELD+MFDLGFGPNIKKILTSV     R+CN+KCQS
Sbjct: 241 TPNEVSELIEDGSMVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 IVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVV 358
           +VVTSTLIKM+H+Q SSLV+SL+  D GEIAAM+LEIEEEEAFHLMESPD LK KLAD V
Sbjct: 301 VVVTSTLIKMLHKQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

[Close]

BLAST of CSPI06G04560 vs. NCBI nr
Match: XP_004141005.1 (DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >KGN46104.1 hypothetical protein Csa_004924 [Cucumis sativus])

HSP 1 Score: 697.6 bits (1799), Expect = 5.7e-197
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60
           MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE
Sbjct: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60

Query: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMG 120
           QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMG
Sbjct: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMG 120

Query: 121 VLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
           VLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF
Sbjct: 121 VLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISEL 240
           VMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISEL
Sbjct: 181 VMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHE 300
           IEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHE
Sbjct: 241 IEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHE 300

Query: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET
Sbjct: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 357

[Close]

BLAST of CSPI06G04560 vs. NCBI nr
Match: XP_008456722.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis melo] >KAA0031628.1 DEAD-box ATP-dependent RNA helicase 39-like [Cucumis melo var. makuwa])

HSP 1 Score: 641.0 bits (1652), Expect = 6.3e-180
Identity = 329/357 (92.16%), Postives = 338/357 (94.68%), Query Frame = 0


Query: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60
           MGSRRKA+LE SHCANILLSPTKRSIFPN  LS NA LAS FCSSTFSRSS DGTPVEN+
Sbjct: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFALSANALLASPFCSSTFSRSSADGTPVEND 60

Query: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMG 120
           QP QSNRDSTLLEKFRLRKLKGLSKISQ S SSNGGEK MTGFR LGLCNEL  AVE+MG
Sbjct: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120

Query: 121 VLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
           +LAPSELDCA IPAVLEGKNVV GYL+ PERALAYLLPLIQNLKRDEKRYGTRSKHPRAF
Sbjct: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISEL 240
           VMCPTAQLSEELFCMAKY SNYRQLKTPRDN CGELELQKSASDVSIGLLIGTPDEISEL
Sbjct: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHE 300
           IE+GSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVR+CN+KC+SIVVTSTLIKMMHE
Sbjct: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE 300

Query: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET
Sbjct: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 357

[Close]

BLAST of CSPI06G04560 vs. NCBI nr
Match: XP_038886391.1 (DEAD-box ATP-dependent RNA helicase 39-like [Benincasa hispida])

HSP 1 Score: 529.3 bits (1362), Expect = 2.7e-146
Identity = 276/359 (76.88%), Postives = 308/359 (85.79%), Query Frame = 0


Query: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60
           MGSRRKA+ E SH AN LL PTKRS FPN TLS NAFLAS+  SS FSR+STDGT +EN+
Sbjct: 1   MGSRRKALFELSHYANSLLCPTKRSTFPNLTLSRNAFLASRLHSSAFSRTSTDGTAMEND 60

Query: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQD--SPSSNGGEKAMTGFRDLGLCNELGEAVEK 120
           QP QSNRD+ LLEKFRLRKLKG SK+SQ+  S SSN GEK +TGF++LGLCNEL EAVE+
Sbjct: 61  QPPQSNRDAMLLEKFRLRKLKGSSKVSQESSSTSSNRGEKVITGFKELGLCNELAEAVEE 120

Query: 121 MGVLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPR 180
           MG+ APSEL C GIPA+LEGKNVV G L  PERALAYLLPLIQNLKRD K+YG RSKHPR
Sbjct: 121 MGIFAPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDGKKYGVRSKHPR 180

Query: 181 AFVMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEIS 240
           AFV+C + +LS+E+F MAK+ SNYRQL T RDNGC ELELQKSASD+SIGLLIGTP EI 
Sbjct: 181 AFVLCSSVELSDEVFQMAKFISNYRQLATARDNGCIELELQKSASDISIGLLIGTPGEIL 240

Query: 241 ELIEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMM 300
           +LIE+GSVV DEINYLV DELDSMFDLGFGPNIK ILTSVR+CN+KCQS+V+TST IKM+
Sbjct: 241 KLIEEGSVVPDEINYLVLDELDSMFDLGFGPNIKDILTSVRHCNEKCQSVVLTSTFIKML 300

Query: 301 HEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           HEQ SSLV+SL+ GD GEIAAM+LEIEEEEAFHLMESPD LK KLADVVESL  STQ T
Sbjct: 301 HEQHSSLVESLKRGDTGEIAAMLLEIEEEEAFHLMESPDTLKCKLADVVESLCASTQRT 359

[Close]

BLAST of CSPI06G04560 vs. NCBI nr
Match: XP_022959642.1 (DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita moschata])

HSP 1 Score: 473.4 bits (1217), Expect = 1.7e-129
Identity = 256/370 (69.19%), Postives = 293/370 (79.19%), Query Frame = 0


Query: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60
           MGSRRKA+LE  H  N L  PTK ++F N   STNAFLAS++ SS+FSR+ T     EN+
Sbjct: 1   MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRYFSSSFSRTLT----TEND 60

Query: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSS--------NGGEKAMTGFRDLGLCNEL 120
           +P +++R++ LLEKFR RKLKG S IS++S SS        NGGEK MTGF++LGL NE+
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 GEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGT 180
            EA E MG   PSEL C GIPA+LEGKNVV G L  PERALAYLLPLIQNLKRD K  G 
Sbjct: 121 AEAAEGMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGV 180

Query: 181 RSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIG 240
           RSKHPRAFVMC T +LS+E+F MAK+ SNY+QLKT +DNG G+LELQ  ASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGQLELQNGASDVSIGLLIG 240

Query: 241 TPDEISELIEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSV-----RNCNKKCQS 300
           TP+E+SELIEDGSVV DEI YLV DELD+MFDLGFGPNIKKILTSV     R+CN+KCQS
Sbjct: 241 TPNEVSELIEDGSVVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 IVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVV 358
           +VVTSTLIKM+HEQ SSLV+SL+  D GEIAAM+LEIEEEEAFHLMESPD LK KLAD V
Sbjct: 301 VVVTSTLIKMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

[Close]

BLAST of CSPI06G04560 vs. NCBI nr
Match: XP_022990794.1 (DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita maxima])

HSP 1 Score: 471.9 bits (1213), Expect = 5.0e-129
Identity = 255/370 (68.92%), Postives = 293/370 (79.19%), Query Frame = 0


Query: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60
           MGSRRKA+LE SH  N L  PTKRS F N  +S NAFLAS++ SS+FSR+S      EN+
Sbjct: 1   MGSRRKALLELSHYLNSLSCPTKRSSFHNPVISLNAFLASRYFSSSFSRTS----ETEND 60

Query: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSS--------NGGEKAMTGFRDLGLCNEL 120
           +P +++R++ LLEKFR RKLKG S IS++S SS        NGGEK MTGF++LGL NE+
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 GEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGT 180
            EA E MG   PSEL C GIPA+LEGKNVV G L  PERAL YLLPLIQNLKRD K  G 
Sbjct: 121 AEAAEGMGFFVPSELLCVGIPALLEGKNVVLGSLYGPERALTYLLPLIQNLKRDAKSNGV 180

Query: 181 RSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIG 240
           RSKHPRAFVMC T +LS+E+F MAK+ SNY+QLKT +DNG G+LELQ  ASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGKLELQNGASDVSIGLLIG 240

Query: 241 TPDEISELIEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSV-----RNCNKKCQS 300
           TP+E+SELIEDGS+V DEI YLV DELD+MFDLGFGPNIKKILTSV     R+CN+KCQS
Sbjct: 241 TPNEVSELIEDGSMVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 IVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVV 358
           +VVTSTLIKM+H+Q SSLV+SL+  D GEIAAM+LEIEEEEAFHLMESPD LK KLAD V
Sbjct: 301 VVVTSTLIKMLHKQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

[Close]

BLAST of CSPI06G04560 vs. TAIR 10
Match: AT4G09730.1 (RH39 )

HSP 1 Score: 160.6 bits (405), Expect = 2.3e-39
Identity = 95/278 (34.17%), Postives = 164/278 (58.99%), Query Frame = 0


Query: 35  NAFLASQFCSSTFSRSSTDGTPVENEQPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSN 94
           +AF      ++T S  +T+    + +Q +     + LLE+ RLR LK  +K  Q  PSS 
Sbjct: 39  HAFRPLYSAAATTSSPTTETNVTDPDQLKH----TILLERLRLRHLKESAKPPQQRPSSV 98

Query: 95  GG-----------EKAMTGFRDLGLCNELGEAVEKMGVLAPSELDCAGIPAVLEGKNVVF 154
            G           +K +  F++LGL  E+  A++++ +  P+E+ C GIPAV+E K+VV 
Sbjct: 99  VGVEEESSIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVL 158

Query: 155 GYLDEPERALAYLLPLIQNLKRDEKRYG--TRSKHPRAFVMCPTAQLSEELFCMAKYFSN 214
           G      + LAYLLP++Q ++ DE   G  T+ + PR  V+CPT +LSE+++ +AK  S+
Sbjct: 159 GSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISH 218

Query: 215 YRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISELIEDGSVVLDEINYLVFDELDS 274
           + + ++   +G   +  Q+ + + +I +++GTP  I + IE+G++V  +I YLV DE D+
Sbjct: 219 HARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADT 278

Query: 275 MFDLGFGPNIKKILT-----SVRNCNKKCQSIVVTSTL 295
           MFD GFGP I+K L      +++  ++  Q+++VT+T+
Sbjct: 279 MFDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATM 312

[Close]

BLAST of CSPI06G04560 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 5.6e-17
Identity = 46/177 (25.99%), Postives = 87/177 (49.15%), Query Frame = 0


Query: 103 FRDLGLCNELGEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQN 162
           F D G  +++  A++K     P+ + C  +P VL G++V+        +  A++LP+I +
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289

Query: 163 LKRDEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSA 222
           +    +    R + P   +  PT +L+ ++F  AK FS    L+     G      Q   
Sbjct: 290 IMDQPEL--QRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKE 349

Query: 223 SDVSIGLLIGTPDEISELIEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVR 280
                 +++ TP  + ++++  ++ +   +YLV DE D MFDLGF P ++ I+  +R
Sbjct: 350 LKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIR 404

[Close]

BLAST of CSPI06G04560 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 85.5 bits (210), Expect = 9.5e-17
Identity = 67/252 (26.59%), Postives = 115/252 (45.63%), Query Frame = 0


Query: 44  SSTFSRSSTDG------------TPVEN----EQPRQSNRDSTLLEKFRLRKLKGLSKIS 103
           S T S+   DG            TP E     E P  +    T +E++  RKL+ ++   
Sbjct: 34  SHTSSKKDNDGNESPRKLDLDGLTPFEKNFYVESPAVAAMTDTEVEEY--RKLREITVEG 93

Query: 104 QDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLD 163
           +D P      K +  FRD+G  + + E V+K G   P+ +   G P  ++G++++     
Sbjct: 94  KDIP------KPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAET 153

Query: 164 EPERALAYLLPLIQNLKRDEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLKT 223
              + L+YLLP I ++             P   V+ PT +L+ ++   A  F +  ++KT
Sbjct: 154 GSGKTLSYLLPAIVHVNAQPML--AHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKT 213

Query: 224 PRDNGCGELELQKSASDVSIGLLIGTPDEISELIEDGSVVLDEINYLVFDELDSMFDLGF 280
               G      Q       + ++I TP  + +++E  +  L  + YLV DE D M D+GF
Sbjct: 214 TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGF 273

[Close]

BLAST of CSPI06G04560 vs. TAIR 10
Match: AT5G14610.2 (DEAD box RNA helicase family protein )

HSP 1 Score: 85.5 bits (210), Expect = 9.5e-17
Identity = 62/258 (24.03%), Postives = 120/258 (46.51%), Query Frame = 0


Query: 100 MTGFRDLGLCNELGEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPL 159
           +  F   GL NEL   V   G  APS +     P  ++ +++V        + L YL+P 
Sbjct: 160 LMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPG 219

Query: 160 IQNLKR--DEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELE 219
             +L+R  ++ R G     P   V+ PT +L+ ++   A  F    ++      G     
Sbjct: 220 FMHLQRIHNDSRMG-----PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKG 279

Query: 220 LQKSASDVSIGLLIGTPDEISELIEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTS 279
            Q    +  + +++ TP  +++++E   + L +++YLV DE D M D+GF P I+KI+  
Sbjct: 280 PQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNE 339

Query: 280 VRNCNKKCQSIVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPD 339
           V     K Q+++ T+T  K + +  + L+ +    + G +  +V      +   ++ +P 
Sbjct: 340 VPT---KRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVL-APM 399

Query: 340 ALKSKLADVVESLRPSTQ 356
              S+L  ++ S  P ++
Sbjct: 400 EKHSRLEQILRSQEPGSK 408

[Close]

BLAST of CSPI06G04560 vs. TAIR 10
Match: AT2G42520.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 4.7e-16
Identity = 57/242 (23.55%), Postives = 112/242 (46.28%), Query Frame = 0


Query: 44  SSTFSRSSTDGTPVENE----QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKA 103
           S  + R   +  P EN+    +P  + +D+T++               +D P    G+  
Sbjct: 105 SGGWDRREREVNPFENDDSEPEPAFTEQDNTVIN----------FDAYEDIPIETSGDNV 164

Query: 104 ---MTGFRDLGLCNELGEAVEKMGVLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYL 163
              +  F ++ L   L   + +   + P+ +    IP +LEG++++        +  A+ 
Sbjct: 165 PPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFC 224

Query: 164 LPLIQNLKRD---EKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGC 223
            P+I  + +D   ++  G+R+ +P A ++ PT +L+ ++   AK FS    +K     G 
Sbjct: 225 FPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGG 284

Query: 224 GELELQKSASDVSIGLLIGTPDEISELIEDGSVVLDEINYLVFDELDSMFDLGFGPNIKK 276
             +  Q    +  + +L+ TP  +++L+E   V +  I +L  DE D M D+GF P I+K
Sbjct: 285 TPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRK 336

The following BLAST results are available for this feature:

BLAST of CSPI06G04560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5VRY0	3.9e-39	34.48	DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q56X76	3.3e-38	34.17	DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 P...	[more]
Q8TDD1	4.1e-17	26.32	ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2	[more]
Q4HZ42	9.2e-17	29.38	ATP-dependent RNA helicase DBP10 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS ...	[more]
A1CHL3	9.2e-17	26.50	Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus clavatus (stra...	[more]

BLAST of CSPI06G04560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB87	2.7e-197	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052790 PE=4 SV=1	[more]
A0A5A7SLY8	3.0e-180	92.16	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C4L0	3.0e-180	92.16	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A6J1H541	8.4e-130	69.19	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JT03	2.4e-129	68.92	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CSPI06G04560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141005.1	5.7e-197	100.00	DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >KGN46104.1 hypothetica...	[more]
XP_008456722.1	6.3e-180	92.16	PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis melo] >KAA003162...	[more]
XP_038886391.1	2.7e-146	76.88	DEAD-box ATP-dependent RNA helicase 39-like [Benincasa hispida]	[more]
XP_022959642.1	1.7e-129	69.19	DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita moschata]	[more]
XP_022990794.1	5.0e-129	68.92	DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita maxima]	[more]

BLAST of CSPI06G04560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09730.1	2.3e-39	34.17	RH39	[more]
AT2G47330.1	5.6e-17	25.99	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G55150.1	9.5e-17	26.59	DEA(D/H)-box RNA helicase family protein	[more]
AT5G14610.2	9.5e-17	24.03	DEAD box RNA helicase family protein	[more]
AT2G42520.1	4.7e-16	23.55	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 92..310 e-value: 1.2E-32 score: 115.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 98..299
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 153..295 e-value: 2.2E-19 score: 69.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..66
None	No IPR available	PANTHER	PTHR47960	DEAD-BOX ATP-DEPENDENT RNA HELICASE 50	coord: 94..351
None	No IPR available	PANTHER	PTHR47960:SF6	DEAD-BOX ATP-DEPENDENT RNA HELICASE 39-LIKE	coord: 94..351
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 132..312 score: 14.954275
IPR036053	PABC (PABP) domain	SUPERFAMILY	63570	PABC (PABP) domain	coord: 305..354

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G04560.1	CSPI06G04560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902775	mitochondrial large ribosomal subunit assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding