CSPI06G04440 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G04440
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	cleavage stimulating factor 64
Location	Chr6: 4074124 .. 4083540 (-)
RNA-Seq Expression	CSPI06G04440
Synteny	CSPI06G04440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAACAATATTAAGAGTTGCAGAAAGAGGGGCGACCTCTAAAATTAAATCTGGTTGGAATAGGATCTTCTCCGAACGTTTCATTCATTCATTCTTCTTCTTCTTCTTCTTCTTCGCCGTCGCCGTTGTTTTCATCGGAATCTTCAATTTCTTTATTCGTTTTCTTCCATAATCTTTGTTCTTCAATACGAACCATCACTCACTTACCAACTCTATTGATCTGCGGTCCTTTTCCGGACAGCTTCTCTGCAGTTTTTTTTTTTAGCTGCAGTGCATCAGTGGTAGCCGGATTAGTTTAATAACTATGCTGAGGAGGAAGAAGATGAAGCACTGCTTCAGCTTCTTCTTCTTCTTCTGTTGATTCATGGCCTCCACTCAGCACCGCTGTGTTTTCGGTATGTTCTGTATTTCTCCTTCGGTTGATTCTCTGATTTTGCGTTTTGATTTGATGGGGAGCTGTTTTTTTATGTTGAAGAATGGTGGATTTTTGTTTTATGTATTGTCGCTTCTTATTTTGCTTTCAATTGCTCCTGGCTTTTATTAATCTGGGTCACGATTGAATTTTTGTGTTTGTGCCTTATTCTGTTGTTCAATTTTGCTTTCAGTTGGGAATATACCTTATGATGCTACTGAAGAGCAGCTTATAGAAATCTGCCAAGAAGTTGGGCCCGTAGTGTCGTTCAGGTCCGTGTTCTCGGCTCTTTTTTTTCTTTCTTTTTTCTGGGAAATGAACCCTAAAATTGATATTGGATTGACATTTACGATTTAGAATGAGATTGATAGCTTTGAAGCCGTAAAGTTGATTTCTTTTTCTTAATTATTATTTTTAAAGCCTCCTTGAACTTTCTGTAGTTTCCTTGCCTTATATTTAGCCTCCTTCTATGTTCTGTTTTGGACCTTTGGTGGTTTACTATGTCTTTCTCTAATGGGGAAAGATGAGTGGCTATGCAATGCTAGAATAGAATCCTTTCTTTTTGCTAGGTTTTGTCTACTGCCAGCCCATTACCAAGCCAAGGGCTGAGCATTCTGTTCTCAATTGTTTTCTATAGGTCAGTCATACGCATATAGTCTTGTTAATTCTATTTCGTGGCTGATAAATTGGCTATCTCTGGTCTTATTGATTGGGGGTTGTAGTGGAATGCCAGTGTATATTTTGATTAAAATTGTAGCGTGGTGTTAGTGTTATATCTTATTACATCTTTTTAATAAATGTAAGACGTTTTGGTTCGGTCACGGTATAGTGTACATGAAAAGAGGTCTTTATCTAATCTGTAAACAATGAACTACAACTAACACACTACTTTTGGAATTTGAGCACAGTATTGGAAGCTGTAACTTTTAATTAACTGCAGTAAGCTGGGGCATGTTCTGTGCTTTGGGATATTTGGGGAGAGAGGAATGATAGGGTTTTTAGAGGTAGGAAAAGGGACCCTTGTGAGGTTTGGTGCTTAGCTAGATTTCATGTGTACCTTTGGGCTTCAGTGTTGAAGCTCTTTTGTAAATGTTCTCTTGGAAATATTTTACTTAATCGGAGCCCCTTTCTTTAGTTGGGGTGTTTTGGTGGACTTTTATTTTTATACGCCCTTGTGTTTTCTCAATGAAGTTAGTTGCTTTATCAAAAAAATTAAAATTAAAATTAAATAACTGCAATAAGCTATTCTTGAAAATCACCATCTTCTGAGTTTCCAATCCAAAAACACGAAAGAAAAAGAAAACAAACTAAGTGCAGGACATCAATTATGAGAACCCATTTTCCCTAACATCTGAGTCTCTTAGGAATTTAAATATTGTATTAATTTATCATTTCAGCTACCGTTTTCCCATACATTTCAAAGTTAAAATTAACAGTTCCTTCGTTTTTTAGATTAGTTATTGACAGAGAAACTGGAAAACCTAAAGGCTATGGGTTTTGTGAGTACAAGGATGAAGAAACAGCTTTGAGTGCTCGTCGTAATTTACAAGGTTATGAAATTAATGGTCGACAATTACGAGTTGATTTTGCTGAGAATGACAAGGGTGCAGACAGAAATAGAGAACAGGTGAAATATTTAACCTCTTGCAATCTGGCTCATTGACTATTTTTGTCCATTCAGCTAGTTACATTGGGTTTTTGGTATTATTTTCAATAAAATACTTTTTAAATATTATTGACTTTATCATACAAAAACTTAGATTATAATGCTGGCATATTTCAAAGCGTGTACTGTAAATATTAAATTGATTTAATTTTTCAGACCTTGGAGGCTTCTTTTATTACTCTGCTTATTGTAATTTTCAACCAGTAGTTCAAGAAACAAGTTCGCAGGAGGTTGTTTTGTAGTCTTTACCCTGATATTTTTGTTTTTCATGTTTAAAATGGATTCAAATATATATTTTCGATTGCTTTATATTAACCTTCTTAATGCCTAGGTTAGATCTGAATTTTATTATATGTACATGTATATAAAAGACTGGTATTGCTCTGACTAACATAGTATTAACAAGAACAAAAATATTTGAGAAGATTAATAGACTCTTCTGTAGTTATGATCTTGGTTTGTTTTTATTAGATTGGAACCCCTTTTTGTAGTTACTTTTTGGGCTCCCTCTTGCTATTGGTATTTGTTAGCCTCTTTTGTTTGCCCTTCTATTCCTTTCATTTTTCTGCTCGATGAGAGTTTAATTTCTTACAAATATATTGGTACTTGTGAACTTTTTTATGATAGGATTTTTTTGAAATGTTGGCAATGTTCTTTGAGAAGAAAAGGATACAATTTTTTTATCTGAAACTGAAAGTTCTACAGAGGATTTCATTGCTTATTTCTATTTTCTTTTATTATTTCTATTTTTTTATCGGAAAGGTTCTTTTGGTAAGTATACCTCTGAGTTAAAAACTGAAATTAAAAAATCCATCTAGAATTCATAAATCCAAAGGAAATATTCCAAAAATAAAATACTCAACTCAGTCTTCAGCTGCATTTTTTTTTTCCTTCAATCATCATCATACTCATTTGCAATCAAATGACTTGTCAACTTGCTGAAACTATGCATTTGAAATCAGAGTATTTAAATAAATAAAAAATTTCCTTTTATGTGCTCTTCCACCAATACACCTTGACTACATATAGCATGTTAATTACGGTTTGATTTGAAGAATTCTTCTTCTCTCTTTCAGGGTCGTGGAGGACCTGGATTGGTTGCAAATGCTGGTTAGTTTTCTCTATCTTAAATGTTTTCTTGCCTTCTGGTTTTTGTGTTAACATGAAAGTTGCTAAATGAACAATTAGGTGGCCCAACACCCCATGGGGAATCCAGTCAACATCAACCAATTGGTCTTCACATAGCTATCACTGCTGCTGCTGTCATGGCGGGAGCCCTTGGTGGTGCACAAGCAGCTTCTAATCAGAATAATTTACAGAGTGCAACAATGCCCAACGATCCGTTAACTTTACATCTGGCTAAACTTTCTAGGAGTCAGCTTACTGAAGTTATGTCAGGGCTAAAGGTAACCTTTTGAGTATGTTCCCTCCTCTCTCCTTAGTTTCCTGAATGGCTCCTGTTGATTGGTACATTGTTTGGACTTAGGCAATGGCTACACAAAACAAGGATTTGGCTCGACAGCTATTGCTGGCAAGACCACAACTATCAAAAGCTCTTTTCCAGGTACCTACTTACCTTTCCTCCTTTAAGCATAGAGAAGATCCTCCATATCTAGCGTGTTTTACTTCTTCTCTTTTTTCCTTTCCTTTTCTGTATAATATTATTTTCATAATTACTACTAGTTATATTGATGAAATTCTGCCTTATGTTACTCTTATGATCTTGTTGTCTATGTGCGTCAACCTTCTAAACATTGTTATGCAATGTATTTCTTCATTATCTCTTAGTCTAGTAGTTACTGGAGAAAAACAAGAAAAAGTATTTAGAGCAAGTCATGACATGAATAAAATATGAGATTGAAGGTAGCTGGTTGAACCCAATTGGTTTTGTAGGTGTCAAGGGAACCAAAGTAGATCATTACTATACATGTTAATTATTGTTTCATCTAGCTTGCCATTCATCCTCGATTCCTCATGCATGATGTTGAGAATGTGTATATGCACATATATAAAGTACTCACTCCTATTTTTCACGCATTTAAGTTCAATAGGTTTATTGCACTTCATTACGAATTGCATCTTTTTTAAGAAACCGAGCTTCACTAAGAAGAATTAGAACAACTTACGTCCTGTAGATCACAAATTATATCGTTGAGATAAGAAACATTGTTTTACTTCTGGCATTTTCGATGAACAAAAATGATATTTCTAGAAGTGTCAACTCTTAATTCTTTTTATAGAGACAGACTAACCGAAGCACTTGTTAAGTTAGGAAGAAAAGAAGGTTTTGATGGGAATTAATGAAAGTGTTCTTGCCTCTATCATTAGCTAGGGTGGTCTTCAGTTATGATGTTTCAGTCACCTTTCAATGGTCCCTTAATTATGTTGATGTATTTCACTCGTTGCTAGCATGGTTCATATGTTAAAAAAATTAAAAGTCTAATTGCATAAGAAACACACATTTGTAGAACATTTCAGTCACACACTCTTCTTTTAGCAGATGCTCATAACTAGAGGACCCTCTCTTTCCCCTTAAATTAAGAGAATTGTGCAAAGACATAATTTTATGAACTTTTCTTATGTAAAGCTACTAGAACAGTAATATGCGAAATGCACACCTGGAACCTTCTCATCAGGTTTAAGTCAAAGCTACTCTTTTATCGTTAATTTTCTAGCTTTTATGGCTCAAAGCATCTTTAGGTCCTAATATCAGAACCGATTTTTGTGTTAAATTTTGATTGAAAACCTATGTTGTGAGAATCAAAATAGTTCTTTGTTTAGACGGAAAAAGGGAGAGAGAAGACTTCAAATAAATATTTGGGAAAGAAGAGACATGCAATATTTATATTTTTAGTTGTACCATATTAGTTATTTCTTTGATAACTTTCTTGCTTCTCACAATTTTATGGACTATATCTCTTCTTGTATGCAATATCAGCTAAACATTCTTTTTTCTCCTCTTTTCTGTAATTTTGTTTGCAGTCACAGATAATGCTTGGCATGGTCACTCCACAAGTGGTATTTCTCTTCACTGCTTATACTGTTACTATTATTATCATCATTACTATTATAATTATTTGTGTGTGTTTTATAGCTGTTAAGATTTTCTCATGCCAAATTCTCCTTCTTTGATTGCTGCAGTTACAGAAGCCTAATTTACAGCAATCTGCTACTCATCCTCAGCTTCCTTTGCATGAGAGTCAGCAGGGTCAGCCATCATCTCTTCAAATTCAACCAGGCCTGCCCCCTCTTGCACCTAACAGGATGCAAACTGGTTTTGTACCTAAAAAAGAAACACAATCGTCTCTCATGCCCCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCATCCCAACGACCTTCACTTCAATCTCAAATTCAGCCATCACACACTTTACAAGGCTCTTTGACTGGAATACCTGGAGGCTCATCACTTCCTTCCATAAGTTTGCAGGGAAATATATCTATTAGGCAACAGGTTCAGGCGCCCTCCTCCTCCTCTTTAAAGCAGCACATGCGTCCTCCTCTTCAGCAATATTTGGGGCATGGTGGAGCTTTAATTCCTGGCCATAACACTCATATTACTAATCCAGAAGCTAAACCATCTCTTTTGCCTCACCCTTCCTTATCAGATGCAGACTTTCAGGTTCTACTTTATGTTTTTTTTATAGTTTAATATATAAATGTCTTTGAACTAGAACATAGATGTCAATCCTATTTTTTCTTTTCCCAAATCTTTAATAGGAAGGGCTTTCTCCCCTCTGTATTTTACTTGGAGAGCAGGTAAGGCCACTATAGCAAAAGTTGCTTTCCAACCATGAAGTTTACCTTTGATAGAATGACAAGTTAAAGCTTGATTCAATACAAATGTGGAGGGGAAACTATAATGCAACTAACTTTTATGTTAATGTTTTGCTGACTGTTATTGGAGAAAATTGAAATGTTCTTAATTTATTTCTCATGTGTATGTGTCGACTTAATGAGGAACACTTTATGATCAATAAATGAGGCGTTGTTTATATGGCTATATGCGTACTTTTATCAGTTCTTTTTTCCTTTTTGAGAATAAACAAAATTTTCATTCGTGTATGTAAAAACAAAAGGACAAACCACCAAACCATAGAAGTAAAAATGCCAAAAATTACAAGAGTCAAACCACAAGGAACCACTAAAGATAAAAAACCTGACCATCAGACGGGCAAAACAAGTACAGCTGCCCAAATGACAGAACTCTGGAAAAGAGATCCAAAACAACTCCAGCTAGATGATAAAGAAGTTTCTCTACTTCAAATCTACTAACTGCCATCAAGAGTGTTATTTATTTATAATAATATCAAGAAATGTAACTTTTCATTGAAAATAAGATAGACTGATGGTCAAAGGAGTTGGAGAGAGTAATTGAAAACACAACCATACTCAAACAAGGAGCCTGCTACTAGCTTGAAAAATTTAATAAGATCTAGTAATATCTTGAAAGTCTTTGGAGCTTGCTCCCCTTGGTTCGGAAGTCTTTTTTTCTTTTCCTTTCTTTTCATTTTCTGTCATCTTGTTTCTGACTTGCTCTTCATAACAGCCTGGCCCCTCCACAGCGTATAGTACACCTCAGATAGTGGGCAGTGATGTTGATAAGTCTTCTCCAGTTCCTCTTGGTGTTGATGGTAAAAGAACTATGCTTCATGGCTTTTCAGGAACAACTAATCGCCCAGTAAAGCAAATAAAATTAGAGGATGGAAAAGGCAGCTCTTTCTTAGCCGGAGGTCTAAGTACATCAATAGGTACCAATGGATCCGGGCAACTTGGAATTGCCTCAGATCCCAATGTGACGGGAACCCAACTCTCTGAGAAACCAACTTCATTGGTACGTGATTTATTATCCGAAAATCTTTACTCACTTTCTTGTTCATGGTAATTTTGTTGCATTGGTAGGATTTAACCTTAGCTGCGACTTCAAATTTTCTATCTGATTTTGGTCTTTGTAGTTATCTATCTCATTCTGAATTTGATTTTTTTTATAGTTTTCAGTGCTCATGTCATGTAGAAGAGTTGTGTATAAAAGGTTAGAGTAGTATTTTCAAGTGTGTTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTACGAAGTATAAAAGGTTAGAGTAGTATTTTCAAGTGTGTTTTTGAGAAATTAGACTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAAGAAGTATAAAAGGTTAGAGTAGTATTTTCAAGTGTGTTTTTGAGGCATGTAGAATGAGCTTGAGTTTGAGATGCCTTTTTATTGTAGCGCTTTTAAGTGACATACTACTTATTTTGGTTGGTAACGTTTATTAACAATTTGGTTTTTGGTTTTTAGTTTTCAAAGTTAAGTCTACAAACAACCCTCTCGCTCCTTTTTTTTTTTTTTGCATTTTTATCTACTTTTTATCCATGTTTTAAAAAACAAAGCTAATTTTTTAAAACTAAAAGAATTTCTAAAAAGCTGTTTCTGGAATATTCAACTCTTGTACTCTACAAAAAATGCATGATGTCAGTAAGAAAATGTGAGGAAATAAACTTAATTTTCAAAAAACAAAAACAAAAGAAACAAAAGACGTAATTGTTACCAAATGGAGTCTTAAACGTTTTAGAATTTTCAAAATCGCTTTTGAACAAAATACTCTGGAAGTCTGTCTCGCTAAAAGTCAGATTGAACTTGATCAATCCAAGGTTTAAATTTATATTTCCAATTTCCTTCCAGACTGTATTATCTTTATTCTGACTTTTTTCTCTAATTTCAATGCTTAGTCCTGAAAGCGTAACTTATCATAGTGAGATGAACTGTGACTATTTTCATTCATAAGATCAGCCAAAATTTTAATTGTTCAAAGCAACATAGTTCTGAATTGCATTAGTTTTATTCCAATAACATCAACATTTTCTGTTTAATTGCATTCATAGCCAAATTACGATGCTTCAAATTCTTGATCCTATAGGACATGAATTTTTTACTTCACTTGAATATGTTTATGTCTTGGAAGTTTCATTCATCACTATGACAAGATCTCCGCATTCTGATGAAGTTGATCGATATCTTCTAAATCACATGAAATAAACTACCACTCCTGTTACTTGTTTCTTCTCCAGCTTCCCCAGAACGTTGAATCTGTACTACTGCAACAAGTTTTGAATCTAACTCCCGAACAGCTTAACTCGTTGCCGCTCGAACAGAGGTTGCAAGTTATTGAGCTCCAGCATGCACTTCGCAGAGACCAAATGCGGCCATCCTAGCAAGTAAATTACCCCTGATCAACCCAACAAGTAGATTGTAAAATATTTTGCTCCAGAAAGATTCAGCCAAGTGACAGTCAAAAATACGTGTAAAATTATTGCTTGTCGAAGGGGTCCGAAGCGACGGGTCCTGCCCACAAGGTATGAGTTTTTCCATAAACAGCATTCATGTAAGGCTTACAAGTTTGTGATTATAGTGATTCCTTAATAATAACAAATCAAGATAGGGGAAAAGATCCAACAGTGGAAGAATTTTGATTTATTTTCAGGGTCTCTTTTTTTGGCCGTTACATTTGCCATTTTTGGACTTCTTTCCTTTGCTTCTGCTGTTCATTCCTTGCATGTAACATTTCATTGAGGCTTTTGGTTTTGTTTGT

mRNA sequence

GAAAACAATATTAAGAGTTGCAGAAAGAGGGGCGACCTCTAAAATTAAATCTGGTTGGAATAGGATCTTCTCCGAACGTTTCATTCATTCATTCTTCTTCTTCTTCTTCTTCTTCGCCGTCGCCGTTGTTTTCATCGGAATCTTCAATTTCTTTATTCGTTTTCTTCCATAATCTTTGTTCTTCAATACGAACCATCACTCACTTACCAACTCTATTGATCTGCGGTCCTTTTCCGGACAGCTTCTCTGCAGTTTTTTTTTTTAGCTGCAGTGCATCAGTGGTAGCCGGATTAGTTTAATAACTATGCTGAGGAGGAAGAAGATGAAGCACTGCTTCAGCTTCTTCTTCTTCTTCTGTTGATTCATGGCCTCCACTCAGCACCGCTGTGTTTTCGTTGGGAATATACCTTATGATGCTACTGAAGAGCAGCTTATAGAAATCTGCCAAGAAGTTGGGCCCGTAGTGTCGTTCAGATTAGTTATTGACAGAGAAACTGGAAAACCTAAAGGCTATGGGTTTTGTGAGTACAAGGATGAAGAAACAGCTTTGAGTGCTCGTCGTAATTTACAAGGTTATGAAATTAATGGTCGACAATTACGAGTTGATTTTGCTGAGAATGACAAGGGTGCAGACAGAAATAGAGAACAGGGTCGTGGAGGACCTGGATTGGTTGCAAATGCTGGTGGCCCAACACCCCATGGGGAATCCAGTCAACATCAACCAATTGGTCTTCACATAGCTATCACTGCTGCTGCTGTCATGGCGGGAGCCCTTGGTGGTGCACAAGCAGCTTCTAATCAGAATAATTTACAGAGTGCAACAATGCCCAACGATCCGTTAACTTTACATCTGGCTAAACTTTCTAGGAGTCAGCTTACTGAAGTTATGTCAGGGCTAAAGGCAATGGCTACACAAAACAAGGATTTGGCTCGACAGCTATTGCTGGCAAGACCACAACTATCAAAAGCTCTTTTCCAGTCACAGATAATGCTTGGCATGGTCACTCCACAAGTGTTACAGAAGCCTAATTTACAGCAATCTGCTACTCATCCTCAGCTTCCTTTGCATGAGAGTCAGCAGGGTCAGCCATCATCTCTTCAAATTCAACCAGGCCTGCCCCCTCTTGCACCTAACAGGATGCAAACTGGTTTTGTACCTAAAAAAGAAACACAATCGTCTCTCATGCCCCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCATCCCAACGACCTTCACTTCAATCTCAAATTCAGCCATCACACACTTTACAAGGCTCTTTGACTGGAATACCTGGAGGCTCATCACTTCCTTCCATAAGTTTGCAGGGAAATATATCTATTAGGCAACAGGTTCAGGCGCCCTCCTCCTCCTCTTTAAAGCAGCACATGCGTCCTCCTCTTCAGCAATATTTGGGGCATGGTGGAGCTTTAATTCCTGGCCATAACACTCATATTACTAATCCAGAAGCTAAACCATCTCTTTTGCCTCACCCTTCCTTATCAGATGCAGACTTTCAGCCTGGCCCCTCCACAGCGTATAGTACACCTCAGATAGTGGGCAGTGATGTTGATAAGTCTTCTCCAGTTCCTCTTGGTGTTGATGGTAAAAGAACTATGCTTCATGGCTTTTCAGGAACAACTAATCGCCCAGTAAAGCAAATAAAATTAGAGGATGGAAAAGGCAGCTCTTTCTTAGCCGGAGGTCTAAGTACATCAATAGGTACCAATGGATCCGGGCAACTTGGAATTGCCTCAGATCCCAATGTGACGGGAACCCAACTCTCTGAGAAACCAACTTCATTGCTTCCCCAGAACGTTGAATCTGTACTACTGCAACAAGTTTTGAATCTAACTCCCGAACAGCTTAACTCGTTGCCGCTCGAACAGAGGTTGCAAGTTATTGAGCTCCAGCATGCACTTCGCAGAGACCAAATGCGGCCATCCTAGCAAGTAAATTACCCCTGATCAACCCAACAAGTAGATTGTAAAATATTTTGCTCCAGAAAGATTCAGCCAAGTGACAGTCAAAAATACGTGTAAAATTATTGCTTGTCGAAGGGGTCCGAAGCGACGGGTCCTGCCCACAAGGTATGAGTTTTTCCATAAACAGCATTCATGTAAGGCTTACAAGTTTGTGATTATAGTGATTCCTTAATAATAACAAATCAAGATAGGGGAAAAGATCCAACAGTGGAAGAATTTTGATTTATTTTCAGGGTCTCTTTTTTTGGCCGTTACATTTGCCATTTTTGGACTTCTTTCCTTTGCTTCTGCTGTTCATTCCTTGCATGTAACATTTCATTGAGGCTTTTGGTTTTGTTTGT

Coding sequence (CDS)

ATGGCCTCCACTCAGCACCGCTGTGTTTTCGTTGGGAATATACCTTATGATGCTACTGAAGAGCAGCTTATAGAAATCTGCCAAGAAGTTGGGCCCGTAGTGTCGTTCAGATTAGTTATTGACAGAGAAACTGGAAAACCTAAAGGCTATGGGTTTTGTGAGTACAAGGATGAAGAAACAGCTTTGAGTGCTCGTCGTAATTTACAAGGTTATGAAATTAATGGTCGACAATTACGAGTTGATTTTGCTGAGAATGACAAGGGTGCAGACAGAAATAGAGAACAGGGTCGTGGAGGACCTGGATTGGTTGCAAATGCTGGTGGCCCAACACCCCATGGGGAATCCAGTCAACATCAACCAATTGGTCTTCACATAGCTATCACTGCTGCTGCTGTCATGGCGGGAGCCCTTGGTGGTGCACAAGCAGCTTCTAATCAGAATAATTTACAGAGTGCAACAATGCCCAACGATCCGTTAACTTTACATCTGGCTAAACTTTCTAGGAGTCAGCTTACTGAAGTTATGTCAGGGCTAAAGGCAATGGCTACACAAAACAAGGATTTGGCTCGACAGCTATTGCTGGCAAGACCACAACTATCAAAAGCTCTTTTCCAGTCACAGATAATGCTTGGCATGGTCACTCCACAAGTGTTACAGAAGCCTAATTTACAGCAATCTGCTACTCATCCTCAGCTTCCTTTGCATGAGAGTCAGCAGGGTCAGCCATCATCTCTTCAAATTCAACCAGGCCTGCCCCCTCTTGCACCTAACAGGATGCAAACTGGTTTTGTACCTAAAAAAGAAACACAATCGTCTCTCATGCCCCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCATCCCAACGACCTTCACTTCAATCTCAAATTCAGCCATCACACACTTTACAAGGCTCTTTGACTGGAATACCTGGAGGCTCATCACTTCCTTCCATAAGTTTGCAGGGAAATATATCTATTAGGCAACAGGTTCAGGCGCCCTCCTCCTCCTCTTTAAAGCAGCACATGCGTCCTCCTCTTCAGCAATATTTGGGGCATGGTGGAGCTTTAATTCCTGGCCATAACACTCATATTACTAATCCAGAAGCTAAACCATCTCTTTTGCCTCACCCTTCCTTATCAGATGCAGACTTTCAGCCTGGCCCCTCCACAGCGTATAGTACACCTCAGATAGTGGGCAGTGATGTTGATAAGTCTTCTCCAGTTCCTCTTGGTGTTGATGGTAAAAGAACTATGCTTCATGGCTTTTCAGGAACAACTAATCGCCCAGTAAAGCAAATAAAATTAGAGGATGGAAAAGGCAGCTCTTTCTTAGCCGGAGGTCTAAGTACATCAATAGGTACCAATGGATCCGGGCAACTTGGAATTGCCTCAGATCCCAATGTGACGGGAACCCAACTCTCTGAGAAACCAACTTCATTGCTTCCCCAGAACGTTGAATCTGTACTACTGCAACAAGTTTTGAATCTAACTCCCGAACAGCTTAACTCGTTGCCGCTCGAACAGAGGTTGCAAGTTATTGAGCTCCAGCATGCACTTCGCAGAGACCAAATGCGGCCATCCTAG

Protein sequence

MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQPIGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQGQPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSHTLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGHNTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLHGFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSLLPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS*

Homology

[Close]

BLAST of CSPI06G04440 vs. ExPASy Swiss-Prot
Match: Q9M9G6 (Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.3e-96
Identity = 243/534 (45.51%), Postives = 311/534 (58.24%), Query Frame = 0


Query: 2   ASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
           +S+Q RCVFVGNIPYDATEEQL EIC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETA
Sbjct: 4   SSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETA 63

Query: 62  LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA---------GGPTPH 121
           LSARRNLQ YEINGRQLRVDFAENDKG D+ R+Q +GGPGL +           GGP   
Sbjct: 64  LSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQSQGGPGLPSTTTVTESQKQIGGPV-- 123

Query: 122 GESSQHQPIGLHIAITAAAVMAGALGGAQAAS--NQNNLQSATMPNDPLTLHLAKLSRSQ 181
            +S+ HQP+GLH+A TAA+V+AGALGG Q  S   Q+NLQ     +DPL LHLAK+SRSQ
Sbjct: 124 -DSNMHQPVGLHLATTAASVIAGALGGPQVGSQFTQSNLQ--VPASDPLALHLAKMSRSQ 183

Query: 182 LTEVMSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHP 241
           LTE++S +K MATQNK+ ARQLL++RPQL KA+F +Q+MLG+V+PQVLQ PN+ Q+ +H 
Sbjct: 184 LTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPNIVQAPSH- 243

Query: 242 QLPLHESQQGQPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRP 301
                     Q + L  Q  LPPLA    Q                   APH    SQ P
Sbjct: 244 ----MTGSSIQDAQLSGQNLLPPLAQRSQQLS----------------RAPH----SQYP 303

Query: 302 SLQSQIQPSHTLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYL 361
             QS  QP   +   L   PG SS+       N   R QV+  ++   +Q +  P    +
Sbjct: 304 VQQSSKQPFSQIP-QLVAQPGPSSV-------NPPPRSQVKVENAPFQRQQV-VPASTNI 363

Query: 362 GHGGALIPGHNTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPL 421
           G+           + N   +PS +PH +L ++  Q G  T        G  +++  P   
Sbjct: 364 GYSS------QNSVPNNAIQPSQVPHQALPNSVMQQGGQTVSLN---FGKRINEGPP--- 423

Query: 422 GVDGKRTMLHGFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTG 481
                         + NRP K +K+ED + +S   G +S S+  N               
Sbjct: 424 ------------HQSMNRPSKMMKVEDRRTTSLPGGHVSNSMLPN--------------- 457

Query: 482 TQLSEKPTSLLPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQM 525
              ++ P + +  +V+S LLQQV+NLTPEQL  L  EQ+ +V++LQ AL++D M
Sbjct: 484 --QAQAPQTHISPDVQSTLLQQVMNLTPEQLRLLTPEQQQEVLKLQQALKQDHM 457

[Close]

BLAST of CSPI06G04440 vs. ExPASy Swiss-Prot
Match: Q8BIQ5 (Cleavage stimulation factor subunit 2 OS=Mus musculus OX=10090 GN=Cstf2 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 1.6e-33
Identity = 132/420 (31.43%), Postives = 185/420 (44.05%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQPIGLHIA 126
           NL G E +GR LRVD A ++K  +  +  G G P +       +P+GES           
Sbjct: 76  NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVI------ESPYGESI---------- 135

Query: 127 ITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKAMATQNK 186
                                   S     + ++  +A L   Q+ E+M  +K     + 
Sbjct: 136 ------------------------SPEDAPESISKAVASLPPEQMFELMKQMKLCVQNSP 195

Query: 187 DLARQLLLARPQLSKALFQSQIMLGMVTPQVLQK-------------------------- 246
             AR +LL  PQL+ AL Q+Q+++ +V P++  K                          
Sbjct: 196 QEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTNIPTLISGNPQPVHVAGPGS 255

Query: 247 -PNLQQSATHPQLPLHESQQGQ-----------------PSSLQIQ-----PGLPPLAPN 306
            PN+  +  +PQ P  +S  G                  P+ +Q+      PG   LAP 
Sbjct: 256 GPNVSMNQQNPQAPQAQSLGGMHVNGAPPMMQASMPGGVPAPVQMAAAVGGPGPGSLAPA 315

Query: 307 RM------QTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSHTLQGSLTGIPG 366
            +        G  P    +  +  Q+P A     A QR +L + +     L G     P 
Sbjct: 316 GVMQAQVGMQGAGPVPMERGQVPMQDPRA-----AMQRGALPTNVPTPRGLLGDAPNDPR 375

Query: 367 GSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGHNTHITNPEAKP 372
           G +L +++  G++  R  +  P       H  PP+    GH G   P H+     P A+P
Sbjct: 376 GGTLMTVT--GDVEPRAYLGPPP----PPHQGPPMHHVPGHEGRGPPPHDMR-GGPLAEP 383

[Close]

BLAST of CSPI06G04440 vs. ExPASy Swiss-Prot
Match: P33240 (Cleavage stimulation factor subunit 2 OS=Homo sapiens OX=9606 GN=CSTF2 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.6e-33
Identity = 143/462 (30.95%), Postives = 198/462 (42.86%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGE--SSQHQPIGLH 126
           NL G E +GR LRVD A ++K  +  +  G G P +       +P+GE  S +  P  + 
Sbjct: 76  NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVI------ESPYGETISPEDAPESIS 135

Query: 127 IAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKAMATQ 186
            A+                                    A L   Q+ E+M  +K     
Sbjct: 136 KAV------------------------------------ASLPPEQMFELMKQMKLCVQN 195

Query: 187 NKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQS------ATHPQLPLHESQ 246
           +   AR +LL  PQL+ AL Q+Q+++ +V P++  K   +Q+      A +PQ P+H + 
Sbjct: 196 SPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTNIPTLIAGNPQ-PVHGAG 255

Query: 247 QGQPSSLQIQP-----------------GLPPLAPNRMQTGFVPKKETQSSLMPQNP--L 306
            G  S++ +                   G PPL    MQ G     +  +++    P  L
Sbjct: 256 PGSGSNVSMNQQNPQAPQAQSLGGMHVNGAPPLMQASMQGGVPAPGQMPAAVTGPGPGSL 315

Query: 307 AP--------------------------HQFSASQRPSLQSQIQPSHTLQGSLTGIPGGS 366
           AP                             +A QR SL + +     L G     P G 
Sbjct: 316 APGGGMQAQVGMPGSGPVSMERGQVPMQDPRAAMQRGSLPANVPTPRGLLGDAPNDPRGG 375

Query: 367 SLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGHNTHITNPEAKPSL 416
           +L  +S+ G +  R  +  P       H  PP+    GH     P H       E +   
Sbjct: 376 TL--LSVTGEVEPRGYLGPP-------HQGPPMHHVPGHESRGPPPH-------ELRGGP 413

[Close]

BLAST of CSPI06G04440 vs. ExPASy Swiss-Prot
Match: Q5RDA3 (Cleavage stimulation factor subunit 2 OS=Pongo abelii OX=9601 GN=CSTF2 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.6e-33
Identity = 143/462 (30.95%), Postives = 198/462 (42.86%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGE--SSQHQPIGLH 126
           NL G E +GR LRVD A ++K  +  +  G G P +       +P+GE  S +  P  + 
Sbjct: 76  NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVI------ESPYGETISPEDAPESIS 135

Query: 127 IAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKAMATQ 186
            A+                                    A L   Q+ E+M  +K     
Sbjct: 136 KAV------------------------------------ASLPPEQMFELMKQMKLCVQN 195

Query: 187 NKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQS------ATHPQLPLHESQ 246
           +   AR +LL  PQL+ AL Q+Q+++ +V P++  K   +Q+      A +PQ P+H + 
Sbjct: 196 SPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTNIPTLIAGNPQ-PVHGAG 255

Query: 247 QGQPSSLQIQP-----------------GLPPLAPNRMQTGFVPKKETQSSLMPQNP--L 306
            G  S++ +                   G PPL    MQ G     +  +++    P  L
Sbjct: 256 PGSGSNVSMNQQNPQAPQAQSLGGMHVNGAPPLMQASMQGGVPAPGQIPAAVTGPGPGSL 315

Query: 307 AP--------------------------HQFSASQRPSLQSQIQPSHTLQGSLTGIPGGS 366
           AP                             +A QR SL + +     L G     P G 
Sbjct: 316 APGGGMQAQVGMPGSGPVSMERGQVPMQDPRAAMQRGSLPANVPTPRGLLGDAPNDPRGG 375

Query: 367 SLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGHNTHITNPEAKPSL 416
           +L  +S+ G +  R  +  P       H  PP+    GH     P H       E +   
Sbjct: 376 TL--LSVTGEVEPRGYLGPP-------HQGPPMHHVPGHESRGPPPH-------ELRGGP 413

[Close]

BLAST of CSPI06G04440 vs. ExPASy Swiss-Prot
Match: Q8HXM1 (Cleavage stimulation factor subunit 2 OS=Bos taurus OX=9913 GN=CSTF2 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.0e-32
Identity = 140/468 (29.91%), Postives = 196/468 (41.88%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGE--SSQHQPIGLH 126
           NL G E +GR LRVD A ++K  +  +  G G P +       +P+GE  S +  P  + 
Sbjct: 76  NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVI------ESPYGETISPEDAPESIS 135

Query: 127 IAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKAMATQ 186
            A+                                    A L   Q+ E+M  +K     
Sbjct: 136 KAV------------------------------------ASLPPEQMFELMKQMKLCVQN 195

Query: 187 NKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQS------ATHPQLPLHESQ 246
           +   AR +LL  PQL+ AL Q+Q+++ +V P++  K   +Q+      A +PQ  +H + 
Sbjct: 196 SPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTNIPTLIAGNPQ-TVHSAG 255

Query: 247 QGQPSSLQIQP-----------------GLPPLAPNRMQTGFVPKKETQSSLMPQNP--L 306
            G  SS+ +                   G PPL    +Q G     +  +++    P  L
Sbjct: 256 PGSGSSVSMNQQNPQTPQAQTLSGMHVNGAPPLMQASLQAGVAAPGQIPATVTGPGPGSL 315

Query: 307 AP--------------------------HQFSASQRPSLQSQIQPSHTLQGSLTGIPGGS 366
           AP                             +A QR  L + +     L G     P G 
Sbjct: 316 APAGGMQAQVGMPGSGPVSMERGQVPMQDPRAAMQRGPLPANVPTPRGLLGDAPNDPRGG 375

Query: 367 SLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGHNTHITNPEAKPSL 422
           +L  +S+ G +  R  +  P       H  PP+    GH     P H          P  
Sbjct: 376 TL--LSVTGEVEPRGYLGPP-------HQGPPMHHVPGHDSRGPPPHEM-----RGGPLT 419

[Close]

BLAST of CSPI06G04440 vs. ExPASy TrEMBL
Match: A0A0A0KCI7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G052670 PE=4 SV=1)

HSP 1 Score: 1010.7 bits (2612), Expect = 2.2e-291
Identity = 525/527 (99.62%), Postives = 526/527 (99.81%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGE+SQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH
Sbjct: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGH 360
           TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPP QQYLGHGGALIPGH
Sbjct: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420
           NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH
Sbjct: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420

Query: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480
           GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL
Sbjct: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480

Query: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 528
           LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS
Sbjct: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 527

[Close]

BLAST of CSPI06G04440 vs. ExPASy TrEMBL
Match: A0A5D3BZN4 (Cleavage stimulating factor 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00590 PE=4 SV=1)

HSP 1 Score: 983.0 bits (2540), Expect = 4.8e-283
Identity = 509/527 (96.58%), Postives = 517/527 (98.10%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHG+SSQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGDSSQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQN LQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNTLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHE QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHEIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSS+QIQPGLPPLAPNRMQTGF+PKKETQ SL PQNPLAPHQFSAS RPSLQSQIQPSH
Sbjct: 241 QPSSVQIQPGLPPLAPNRMQTGFLPKKETQLSLTPQNPLAPHQFSASLRPSLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGH 360
           TLQG+LTGIPGGSSLPSI+LQGNISIRQQVQAP+SSSLKQHMRPP QQYLGHGGALIPGH
Sbjct: 301 TLQGALTGIPGGSSLPSINLQGNISIRQQVQAPTSSSLKQHMRPPPQQYLGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420
           N HITNPEAKPSLLPHPS+SD DFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH
Sbjct: 361 NAHITNPEAKPSLLPHPSISDVDFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420

Query: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480
           GFSGTTNRPVKQIKLEDGKGS F AGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL
Sbjct: 421 GFSGTTNRPVKQIKLEDGKGSPFSAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480

Query: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 528
           LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS
Sbjct: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 527

[Close]

BLAST of CSPI06G04440 vs. ExPASy TrEMBL
Match: A0A1S3C3F6 (cleavage stimulating factor 64 OS=Cucumis melo OX=3656 GN=LOC103496563 PE=4 SV=1)

HSP 1 Score: 983.0 bits (2540), Expect = 4.8e-283
Identity = 509/527 (96.58%), Postives = 517/527 (98.10%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHG+SSQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGDSSQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQN LQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNTLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHE QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHEIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSS+QIQPGLPPLAPNRMQTGF+PKKETQ SL PQNPLAPHQFSAS RPSLQSQIQPSH
Sbjct: 241 QPSSVQIQPGLPPLAPNRMQTGFLPKKETQLSLTPQNPLAPHQFSASLRPSLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGH 360
           TLQG+LTGIPGGSSLPSI+LQGNISIRQQVQAP+SSSLKQHMRPP QQYLGHGGALIPGH
Sbjct: 301 TLQGALTGIPGGSSLPSINLQGNISIRQQVQAPTSSSLKQHMRPPPQQYLGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420
           N HITNPEAKPSLLPHPS+SD DFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH
Sbjct: 361 NAHITNPEAKPSLLPHPSISDVDFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420

Query: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480
           GFSGTTNRPVKQIKLEDGKGS F AGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL
Sbjct: 421 GFSGTTNRPVKQIKLEDGKGSPFSAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480

Query: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 528
           LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS
Sbjct: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 527

[Close]

BLAST of CSPI06G04440 vs. ExPASy TrEMBL
Match: A0A6J1K017 (cleavage stimulating factor 64-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489426 PE=4 SV=1)

HSP 1 Score: 888.6 bits (2295), Expect = 1.2e-254
Identity = 464/527 (88.05%), Postives = 482/527 (91.46%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQE GPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEAGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQG GGPGLVAN+GGPT  GES QHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGHGGPGLVANSGGPTALGESGQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAA+MAGALGGAQAASNQN LQ+AT+ NDPLTLHLAKLSRSQLTEVMSGLK 
Sbjct: 121 IGLHIAITAAAIMAGALGGAQAASNQNILQNATISNDPLTLHLAKLSRSQLTEVMSGLKV 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLA QLLLARPQLSKALFQSQIMLGMVTPQVLQKPNL+Q +THPQLP HE QQG
Sbjct: 181 MATQNKDLAHQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPSHEIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QP SLQIQ GLPPLAPNRMQTGFVPKKETQ SL PQNP APHQ SASQ P  QSQIQPSH
Sbjct: 241 QPPSLQIQQGLPPLAPNRMQTGFVPKKETQMSLTPQNPSAPHQSSASQWPPFQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGH 360
            LQG+LTGIPGGSSLPSISLQGNIS+RQQ+Q P SSSLKQH+ PP QQY GHG ALIPGH
Sbjct: 301 VLQGTLTGIPGGSSLPSISLQGNISVRQQIQVPISSSLKQHIHPPSQQYSGHGQALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420
           N HI +PEAKPSLLPHPSLSDADFQPGPSTA ST QIVGSD+DKSS VPLGVDGKR MLH
Sbjct: 361 NAHIADPEAKPSLLPHPSLSDADFQPGPSTANSTSQIVGSDIDKSSLVPLGVDGKRNMLH 420

Query: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480
           GFSGTT+RPVKQIKLEDGKG  F  GGLS SIGTNGSGQLGIASDPN+ GT +SEKPTS+
Sbjct: 421 GFSGTTDRPVKQIKLEDGKGIPFSPGGLSASIGTNGSGQLGIASDPNLAGTHISEKPTSV 480

Query: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 528
           LP N ESVLLQQVL+LTPEQLNSLPLEQR QVIELQ ALRRDQMRPS
Sbjct: 481 LPHNAESVLLQQVLSLTPEQLNSLPLEQRRQVIELQQALRRDQMRPS 527

[Close]

BLAST of CSPI06G04440 vs. ExPASy TrEMBL
Match: A0A6J1HJJ0 (cleavage stimulating factor 64 OS=Cucurbita moschata OX=3662 GN=LOC111464146 PE=4 SV=1)

HSP 1 Score: 876.7 bits (2264), Expect = 4.9e-251
Identity = 457/527 (86.72%), Postives = 479/527 (90.89%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLV NAGGPT HGESSQ QP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNAGGPTAHGESSQLQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQN LQS TMPNDPLTLHLAKLSRSQLTEVMSGLK 
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEVMSGLKV 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQ PNL+Q +THPQLPLH+ QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           Q SSLQIQPGLPPLAPNRMQTGFVPKKETQ S+ PQNPLAPHQFSASQRP LQSQIQP+ 
Sbjct: 241 QSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPAL 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGH 360
            L G+LTGIPGGS LPS+SL G++S+RQQVQ P+S+SLKQHMRPP QQY GHGGA+IPGH
Sbjct: 301 ALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420
           N  I NPEAKPSLLP PSL DADFQPG S AY   QIVGSD DKSS V LGVDGKR + H
Sbjct: 361 NAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVDGKRKIPH 420

Query: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480
           GFSGTTNRPVKQIKLEDGKGS F  GGLS S+G NG+ QLGIASDPN+ G Q+SEKPTS+
Sbjct: 421 GFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSM 480

Query: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 528
           LP +VES LLQQVLNLTPEQLNSLPLEQR QVI+LQ ALRRDQMRPS
Sbjct: 481 LPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 527

[Close]

BLAST of CSPI06G04440 vs. NCBI nr
Match: XP_004141001.1 (cleavage stimulating factor 64 [Cucumis sativus])

HSP 1 Score: 1010.7 bits (2612), Expect = 4.4e-291
Identity = 525/527 (99.62%), Postives = 526/527 (99.81%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGE+SQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH
Sbjct: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGH 360
           TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPP QQYLGHGGALIPGH
Sbjct: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420
           NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH
Sbjct: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420

Query: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480
           GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL
Sbjct: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480

Query: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 528
           LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS
Sbjct: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 527

[Close]

BLAST of CSPI06G04440 vs. NCBI nr
Match: XP_008456694.1 (PREDICTED: cleavage stimulating factor 64 [Cucumis melo] >KAA0031656.1 cleavage stimulating factor 64 [Cucumis melo var. makuwa] >TYK04454.1 cleavage stimulating factor 64 [Cucumis melo var. makuwa])

HSP 1 Score: 983.0 bits (2540), Expect = 9.9e-283
Identity = 509/527 (96.58%), Postives = 517/527 (98.10%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHG+SSQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGDSSQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQN LQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNTLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHE QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHEIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSS+QIQPGLPPLAPNRMQTGF+PKKETQ SL PQNPLAPHQFSAS RPSLQSQIQPSH
Sbjct: 241 QPSSVQIQPGLPPLAPNRMQTGFLPKKETQLSLTPQNPLAPHQFSASLRPSLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGH 360
           TLQG+LTGIPGGSSLPSI+LQGNISIRQQVQAP+SSSLKQHMRPP QQYLGHGGALIPGH
Sbjct: 301 TLQGALTGIPGGSSLPSINLQGNISIRQQVQAPTSSSLKQHMRPPPQQYLGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420
           N HITNPEAKPSLLPHPS+SD DFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH
Sbjct: 361 NAHITNPEAKPSLLPHPSISDVDFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420

Query: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480
           GFSGTTNRPVKQIKLEDGKGS F AGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL
Sbjct: 421 GFSGTTNRPVKQIKLEDGKGSPFSAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480

Query: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 528
           LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS
Sbjct: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 527

[Close]

BLAST of CSPI06G04440 vs. NCBI nr
Match: XP_038885247.1 (LOW QUALITY PROTEIN: cleavage stimulating factor 64 [Benincasa hispida])

HSP 1 Score: 925.6 bits (2391), Expect = 1.9e-265
Identity = 485/527 (92.03%), Postives = 497/527 (94.31%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQE GPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEXGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTP GESSQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPQGESSQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAG+LGGAQAAS+QN LQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGSLGGAQAASSQNTLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNL Q +TH +LPLHE QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLWQPSTHTRLPLHEIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSSLQIQPGLPPLAPNRMQTGFVPKKETQ SL PQNPLAPHQFSAS RP LQSQIQPSH
Sbjct: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQLSLTPQNPLAPHQFSAS-RPPLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGH 360
            LQGSLTGIPGGSSLPSISLQGNIS+RQQVQ P+SSSLKQHMRPP QQY GHGGALIPGH
Sbjct: 301 ALQGSLTGIPGGSSLPSISLQGNISVRQQVQVPTSSSLKQHMRPP-QQYSGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420
           N HI NPEAKPSLLPHPSLSDADFQPGPSTAY    IVGSDVDKSS VPLGVDGKR +LH
Sbjct: 361 NAHIANPEAKPSLLPHPSLSDADFQPGPSTAYGASPIVGSDVDKSSQVPLGVDGKRNVLH 420

Query: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480
           GFSGTTNRPVKQIKLEDGKGS F AGGLS S+GTNGSGQLGI+SDPN+ GTQ SEKPTSL
Sbjct: 421 GFSGTTNRPVKQIKLEDGKGSPFSAGGLSASLGTNGSGQLGISSDPNLAGTQHSEKPTSL 480

Query: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 528
           LP NVESVLLQQVLNLTPEQLN LPLEQRLQV+ELQHALRRDQMRPS
Sbjct: 481 LPHNVESVLLQQVLNLTPEQLNLLPLEQRLQVVELQHALRRDQMRPS 525

[Close]

BLAST of CSPI06G04440 vs. NCBI nr
Match: XP_022993389.1 (cleavage stimulating factor 64-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 888.6 bits (2295), Expect = 2.6e-254
Identity = 464/527 (88.05%), Postives = 482/527 (91.46%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQE GPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEAGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQG GGPGLVAN+GGPT  GES QHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGHGGPGLVANSGGPTALGESGQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAA+MAGALGGAQAASNQN LQ+AT+ NDPLTLHLAKLSRSQLTEVMSGLK 
Sbjct: 121 IGLHIAITAAAIMAGALGGAQAASNQNILQNATISNDPLTLHLAKLSRSQLTEVMSGLKV 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLA QLLLARPQLSKALFQSQIMLGMVTPQVLQKPNL+Q +THPQLP HE QQG
Sbjct: 181 MATQNKDLAHQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPSHEIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QP SLQIQ GLPPLAPNRMQTGFVPKKETQ SL PQNP APHQ SASQ P  QSQIQPSH
Sbjct: 241 QPPSLQIQQGLPPLAPNRMQTGFVPKKETQMSLTPQNPSAPHQSSASQWPPFQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGH 360
            LQG+LTGIPGGSSLPSISLQGNIS+RQQ+Q P SSSLKQH+ PP QQY GHG ALIPGH
Sbjct: 301 VLQGTLTGIPGGSSLPSISLQGNISVRQQIQVPISSSLKQHIHPPSQQYSGHGQALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420
           N HI +PEAKPSLLPHPSLSDADFQPGPSTA ST QIVGSD+DKSS VPLGVDGKR MLH
Sbjct: 361 NAHIADPEAKPSLLPHPSLSDADFQPGPSTANSTSQIVGSDIDKSSLVPLGVDGKRNMLH 420

Query: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480
           GFSGTT+RPVKQIKLEDGKG  F  GGLS SIGTNGSGQLGIASDPN+ GT +SEKPTS+
Sbjct: 421 GFSGTTDRPVKQIKLEDGKGIPFSPGGLSASIGTNGSGQLGIASDPNLAGTHISEKPTSV 480

Query: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 528
           LP N ESVLLQQVL+LTPEQLNSLPLEQR QVIELQ ALRRDQMRPS
Sbjct: 481 LPHNAESVLLQQVLSLTPEQLNSLPLEQRRQVIELQQALRRDQMRPS 527

[Close]

BLAST of CSPI06G04440 vs. NCBI nr
Match: XP_023550987.1 (cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 881.3 bits (2276), Expect = 4.1e-252
Identity = 459/527 (87.10%), Postives = 480/527 (91.08%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGESSQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLV NAGGPT HGESSQ QP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNAGGPTAHGESSQLQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQN LQS TMPNDPLTLHLAKLSRSQLTE MSGLK 
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEAMSGLKV 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQ PNL+Q +THPQLPLH+ QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           Q SSLQIQPGLPPLAPNRMQTGFVPKKETQ SL PQNPLAPHQFSASQRP LQSQIQPS 
Sbjct: 241 QSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSLTPQNPLAPHQFSASQRPPLQSQIQPSL 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYLGHGGALIPGH 360
            LQG+LTGIPGGS LPS+SL G++S+RQQVQ P+S+SLKQHMRPP QQY GHGGA+IPGH
Sbjct: 301 ALQGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPLGVDGKRTMLH 420
           N  I NPEAKPSLLP PSL DADFQPG S AY   QIVGSD D+SS VPLGVDGKR + H
Sbjct: 361 NAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADRSSQVPLGVDGKRKIPH 420

Query: 421 GFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKPTSL 480
           GFSGTTNRPVK IKLEDGKGS F AGGLS S+G NG+ QLGIASDPN+ G Q+SEKPTS+
Sbjct: 421 GFSGTTNRPVKHIKLEDGKGSPFSAGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSM 480

Query: 481 LPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQMRPS 528
           LP +VES LLQQVLNLTPEQLNSLPLEQR QVI+LQ ALRRDQMRPS
Sbjct: 481 LPHDVESALLQQVLNLTPEQLNSLPLEQRQQVIQLQQALRRDQMRPS 527

[Close]

BLAST of CSPI06G04440 vs. TAIR 10
Match: AT1G71800.1 (cleavage stimulating factor 64 )

HSP 1 Score: 355.1 bits (910), Expect = 9.5e-98
Identity = 243/534 (45.51%), Postives = 311/534 (58.24%), Query Frame = 0


Query: 2   ASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
           +S+Q RCVFVGNIPYDATEEQL EIC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETA
Sbjct: 4   SSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETA 63

Query: 62  LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA---------GGPTPH 121
           LSARRNLQ YEINGRQLRVDFAENDKG D+ R+Q +GGPGL +           GGP   
Sbjct: 64  LSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQSQGGPGLPSTTTVTESQKQIGGPV-- 123

Query: 122 GESSQHQPIGLHIAITAAAVMAGALGGAQAAS--NQNNLQSATMPNDPLTLHLAKLSRSQ 181
            +S+ HQP+GLH+A TAA+V+AGALGG Q  S   Q+NLQ     +DPL LHLAK+SRSQ
Sbjct: 124 -DSNMHQPVGLHLATTAASVIAGALGGPQVGSQFTQSNLQ--VPASDPLALHLAKMSRSQ 183

Query: 182 LTEVMSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHP 241
           LTE++S +K MATQNK+ ARQLL++RPQL KA+F +Q+MLG+V+PQVLQ PN+ Q+ +H 
Sbjct: 184 LTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPNIVQAPSH- 243

Query: 242 QLPLHESQQGQPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRP 301
                     Q + L  Q  LPPLA    Q                   APH    SQ P
Sbjct: 244 ----MTGSSIQDAQLSGQNLLPPLAQRSQQLS----------------RAPH----SQYP 303

Query: 302 SLQSQIQPSHTLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPLQQYL 361
             QS  QP   +   L   PG SS+       N   R QV+  ++   +Q +  P    +
Sbjct: 304 VQQSSKQPFSQIP-QLVAQPGPSSV-------NPPPRSQVKVENAPFQRQQV-VPASTNI 363

Query: 362 GHGGALIPGHNTHITNPEAKPSLLPHPSLSDADFQPGPSTAYSTPQIVGSDVDKSSPVPL 421
           G+           + N   +PS +PH +L ++  Q G  T        G  +++  P   
Sbjct: 364 GYSS------QNSVPNNAIQPSQVPHQALPNSVMQQGGQTVSLN---FGKRINEGPP--- 423

Query: 422 GVDGKRTMLHGFSGTTNRPVKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTG 481
                         + NRP K +K+ED + +S   G +S S+  N               
Sbjct: 424 ------------HQSMNRPSKMMKVEDRRTTSLPGGHVSNSMLPN--------------- 457

Query: 482 TQLSEKPTSLLPQNVESVLLQQVLNLTPEQLNSLPLEQRLQVIELQHALRRDQM 525
              ++ P + +  +V+S LLQQV+NLTPEQL  L  EQ+ +V++LQ AL++D M
Sbjct: 484 --QAQAPQTHISPDVQSTLLQQVMNLTPEQLRLLTPEQQQEVLKLQQALKQDHM 457

[Close]

BLAST of CSPI06G04440 vs. TAIR 10
Match: AT1G73840.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 83.2 bits (204), Expect = 6.9e-16
Identity = 122/393 (31.04%), Postives = 170/393 (43.26%), Query Frame = 0


Query: 159 LTLHLAKLSRSQLTEVMSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGM-----V 218
           L  +LA +++SQL ++MS +K +  QN   AR++L+  P L+KALFQ+QIMLGM     V
Sbjct: 12  LPANLAGMTKSQLYDIMSQMKTLIDQNHQQAREILIRNPLLTKALFQAQIMLGMVQPPQV 71

Query: 219 TPQVLQKPNLQQSATHPQLPLHESQQGQPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSL 278
           TP+V  +   Q   +H  +P   + Q   SS Q   G      N MQ     +K      
Sbjct: 72  TPKVEPQAVQQPQQSHQSIPPKPNVQAHMSSFQ-GGGSVHEPANTMQPQAPIRKHPTPQP 131

Query: 279 MPQNPLAPHQFSASQRPSLQSQIQPSH-TLQGSLTGIPGGSSLPSISLQGNISIRQQVQA 338
           MP  P  P   SA+   S QSQ + SH   QG L       S P  S   N         
Sbjct: 132 MPMPP-PPPSVSAN---SAQSQPRFSHPQRQGHLNPAVTSMSHPQSSQVQNAPPPASHHP 191

Query: 339 PSSSSLKQHMRPP-----LQQYLGHGGALIPGHNTHITNPEAKPSLLPHPSLSDADFQPG 398
            S      H+  P     LQQ   H G        H+   +++P    H     A  Q G
Sbjct: 192 TSQQPPFHHLDIPASSTQLQQQPMHSGG-----GPHVAQQQSRPY---HHQYGQA--QTG 251

Query: 399 PSTAY----------STPQIVGSDVDKSSPVPLGVDG------KRTMLHG--FSGTTNRP 458
           P+T +          S P     +   +S  P    G      + T   G  + G  N  
Sbjct: 252 PNTGFQHHGAPTQHLSQPMYHSGNRPPASGGPQFPQGQPHLPSQPTYQGGGQYRGDYNNN 311

Query: 459 VKQIKLEDGKGSSFLAGGLSTSIGTNGSGQLGIASDPNVTGTQLSEKP-TSLLPQNVESV 518
                +   +G S++AG   +S  T+  G LG    P+  G      P  + +   +E  
Sbjct: 312 QLAGLMAQDRGPSWMAGQSESSNITHLPG-LGPVPPPSQVGPGGGPPPRPAPISAEMEKA 371

Query: 519 LLQQVLNLTPEQLNSLPLEQRLQVIELQHALRR 522
           LLQQV++LTPEQ+N LP EQR QV++LQ  LR+
Sbjct: 372 LLQQVMSLTPEQINLLPPEQRNQVLQLQQILRQ 388

[Close]

BLAST of CSPI06G04440 vs. TAIR 10
Match: AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-11
Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 4   TQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
           T+H+ +FVGN+ +  T E L    +E G VV  R+V D +TG+ +GYGF  Y  +    +
Sbjct: 175 TEHK-LFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMET 234

Query: 64  ARRNLQGYEINGRQLRVDFAENDK 88
           A  +L G+E+ GR +RV+ A+  K
Sbjct: 235 ALESLDGFELEGRAIRVNLAQGKK 257

[Close]

BLAST of CSPI06G04440 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-11
Identity = 36/100 (36.00%), Postives = 56/100 (56.00%), Query Frame = 0


Query: 9   VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
           +F+G + Y   E+ L E   + G VV  R+++DRETG+ +G+GF  +   E A SA + L
Sbjct: 42  LFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQAL 101

Query: 69  QGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGG 109
            G +++GR ++V++A      DR    G GG G     GG
Sbjct: 102 DGRDLHGRVVKVNYAN-----DRTSGGGFGGGGYGGGGGG 136

[Close]

BLAST of CSPI06G04440 vs. TAIR 10
Match: AT3G47120.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 67.0 bits (162), Expect = 5.1e-11
Identity = 33/98 (33.67%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 9   VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
           V+VG IP+D TE  L+ +  + G +V   L+ D+ TGK KG+ F  Y+D+ + + A  NL
Sbjct: 38  VYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97

Query: 69  QGYEINGRQLRVD----FAENDKGADRNREQGRGGPGL 103
            G  + GR ++VD    + ++++  +  R Q R   G+
Sbjct: 98  NGALVLGRTIKVDHCGAYKKHEEEDEETRRQNREARGV 135

The following BLAST results are available for this feature:

BLAST of CSPI06G04440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9G6	1.3e-96	45.51	Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV...	[more]
Q8BIQ5	1.6e-33	31.43	Cleavage stimulation factor subunit 2 OS=Mus musculus OX=10090 GN=Cstf2 PE=1 SV=...	[more]
P33240	3.6e-33	30.95	Cleavage stimulation factor subunit 2 OS=Homo sapiens OX=9606 GN=CSTF2 PE=1 SV=1	[more]
Q5RDA3	3.6e-33	30.95	Cleavage stimulation factor subunit 2 OS=Pongo abelii OX=9601 GN=CSTF2 PE=2 SV=1	[more]
Q8HXM1	1.0e-32	29.91	Cleavage stimulation factor subunit 2 OS=Bos taurus OX=9913 GN=CSTF2 PE=2 SV=1	[more]

BLAST of CSPI06G04440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCI7	2.2e-291	99.62	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G052670 PE=4 SV...	[more]
A0A5D3BZN4	4.8e-283	96.58	Cleavage stimulating factor 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C3F6	4.8e-283	96.58	cleavage stimulating factor 64 OS=Cucumis melo OX=3656 GN=LOC103496563 PE=4 SV=1	[more]
A0A6J1K017	1.2e-254	88.05	cleavage stimulating factor 64-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1HJJ0	4.9e-251	86.72	cleavage stimulating factor 64 OS=Cucurbita moschata OX=3662 GN=LOC111464146 PE=...	[more]

BLAST of CSPI06G04440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141001.1	4.4e-291	99.62	cleavage stimulating factor 64 [Cucumis sativus]	[more]
XP_008456694.1	9.9e-283	96.58	PREDICTED: cleavage stimulating factor 64 [Cucumis melo] >KAA0031656.1 cleavage ...	[more]
XP_038885247.1	1.9e-265	92.03	LOW QUALITY PROTEIN: cleavage stimulating factor 64 [Benincasa hispida]	[more]
XP_022993389.1	2.6e-254	88.05	cleavage stimulating factor 64-like isoform X1 [Cucurbita maxima]	[more]
XP_023550987.1	4.1e-252	87.10	cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI06G04440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71800.1	9.5e-98	45.51	cleavage stimulating factor 64	[more]
AT1G73840.1	6.9e-16	31.04	hydroxyproline-rich glycoprotein family protein	[more]
AT1G60000.1	1.4e-11	39.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G61030.1	1.8e-11	36.00	glycine-rich RNA-binding protein 3	[more]
AT3G47120.1	5.1e-11	33.67	RNA recognition motif (RRM)-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 8..81 e-value: 5.8E-28 score: 108.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..79 e-value: 4.3E-22 score: 77.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..85 score: 19.228996
IPR025742	Cleavage stimulation factor subunit 2, hinge domain	PFAM	PF14327	CSTF2_hinge	coord: 153..220 e-value: 5.5E-15 score: 55.6
IPR038192	Transcription termination and cleavage factor, C-terminal domain superfamily	GENE3D	1.10.20.70		coord: 483..525 e-value: 5.6E-9 score: 37.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..118 e-value: 2.9E-31 score: 110.4
IPR026896	Transcription termination and cleavage factor, C-terminal domain	PFAM	PF14304	CSTF_C	coord: 489..521 e-value: 1.1E-7 score: 31.4
None	No IPR available	GENE3D	1.25.40.630		coord: 147..221 e-value: 6.0E-8 score: 34.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..401
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 352..406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..250
None	No IPR available	PANTHER	PTHR45735	CLEAVAGE STIMULATION FACTOR SUBUNIT 2	coord: 2..522
None	No IPR available	CDD	cd12671	RRM_CSTF2_CSTF2T	coord: 9..83 e-value: 1.63049E-51 score: 168.051
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G04440.1	CSPI06G04440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042868	antisense RNA metabolic process
biological_process	GO:0048589	developmental growth
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0098789	pre-mRNA cleavage required for polyadenylation
biological_process	GO:0031124	mRNA 3'-end processing
cellular_component	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding