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CSPI06G01920 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGTGACTTTGAAATAATAATAAAGGAAAAAGTGAAAGATATTTGCTGAGAAAGTGGGTCATGTTAACGACAAAAGAGGGGAGTGGATACCGAAAGTGCAATGTGGGGGACAGAATTCAGAAAATGGCCATATCCCCAAAAGAAAAAAGAAAAAGCTCAGCTAAGTAAAAATTGATGATATTTCCACACAACATTCTATTCTTCCTCAATCAAGAATCTCACCTTTTTGAGCTGAAAATTGCATCCAACAATCCACCAAATGAAGAATCCAATTCCTTCGTCTTACTTTTTTCCTCTATCAACATACATAAATTCTTTACTTAACCAAAACACTTCCTTTTGTTGAAGGATAAGAAATACCATTTTATTTCCTCAACACTCTTCAGATTTTTGCACTTGAAATCAGGAATTGATCAGTCACAGAATGGCTAATGCAAGTATTTCTAAGAGAGAAAATTCTTGGAATTTGATTTCTAACGGGTTCTAATGGGTGTTGTTGTTTTTCTGGCCATAGGTGGTGGAATTGAAGGTCTTTTTGCATTGTGAGGAGTGTATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGGTTTGTGTTTTCAATGTCTTCGTCAGAGCCTCCTATGGTTAAGTAATTCATTTGGGGTTTATTTTCCTTTCTTTTCTTCTCCATTTGCAGATATAGAAACATATAATGTAGATATGGAGATGAACAAAGTGATTGTTACAGGCAATGTCACTAACGAAGAAGTTATCAAAGTTCTTCAGAAAATTAGAAAAACTGCAATTCCATGGCAAGATGATGAACTCAACAACATTAATTACTAGAGAAATTTGGCGATTATCAAGATTAGAGAAGAGAATAAGAATTTGAATTCTGATGTTGTTAGTGATGGATGGATCTACTTTGTTGAGAATTTTGAAACTCTTTTTTATTTTATCATAATCGAAAGTAAAGACTTGGTTCAAATTTACAAGAACTAAACACAGATTCATCAGAGTTAATTTGTAACAGATCAAGTTCTAGACTCTGTACATTAAAAAAAAAAAAAAAAGGAAATGAAAAACCCTAGATCAACAACAATTCAAACTGTTTCTGGAGTTCTGATGAAGAAACGTACTCGATTGAGCGCGTGAAATCTATCTCGGTTGGTGAATCGTTCTCGGACTCACTTTCACGTTCACAATCTTGGGAGCCTTTTGAGCATACTTAGGAACCTCCGCTCCAGACCGAG GTGTGACTTTGAAATAATAATAAAGGAAAAAGTGAAAGATATTTGCTGAGAAAGTGGGTCATGTTAACGACAAAAGAGGGGAGTGGATACCGAAAGTGCAATGTGGGGGACAGAATTCAGAAAATGGCCATATCCCCAAAAGAAAAAAGAAAAAGCTCAGCTAAGTAAAAATTGATGATATTTCCACACAACATTCTATTCTTCCTCAATCAAGAATCTCACCTTTTTGAGCTGAAAATTGCATCCAACAATCCACCAAATGAAGAATCCAATTCCTTCGTCTTACTTTTTTCCTCTATCAACATACATAAATTCTTTACTTAACCAAAACACTTCCTTTTGTTGAAGGATAAGAAATACCATTTTATTTCCTCAACACTCTTCAGATTTTTGCACTTGAAATCAGGAATTGATCAGTCACAGAATGGCTAATGTGGTGGAATTGAAGGTCTTTTTGCATTGTGAGGAGTGTATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAAACATATAATGTAGATATGGAGATGAACAAAGTGATTGTTACAGGCAATGTCACTAACGAAGAAGTTATCAAAGTTCTTCAGAAAATTAGAAAAACTGCAATTCCATGGCAAGATGATGAACTCAACAACATTAATTACTAGAGAAATTTGGCGATTATCAAGATTAGAGAAGAGAATAAGAATTTGAATTCTGATGTTGTTAGTGATGGATGGATCTACTTTGTTGAGAATTTTGAAACTCTTTTTTATTTTATCATAATCGAAAGTAAAGACTTGGTTCAAATTTACAAGAACTAAACACAGATTCATCAGAGTTAATTTGTAACAGATCAAGTTCTAGACTCTGTACATTAAAAAAAAAAAAAAAAGGAAATGAAAAACCCTAGATCAACAACAATTCAAACTGTTTCTGGAGTTCTGATGAAGAAACGTACTCGATTGAGCGCGTGAAATCTATCTCGGTTGGTGAATCGTTCTCGGACTCACTTTCACGTTCACAATCTTGGGAGCCTTTTGAGCATACTTAGGAACCTCCGCTCCAGACCGAG ATGGCTAATGTGGTGGAATTGAAGGTCTTTTTGCATTGTGAGGAGTGTATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAAACATATAATGTAGATATGGAGATGAACAAAGTGATTGTTACAGGCAATGTCACTAACGAAGAAGTTATCAAAGTTCTTCAGAAAATTAGAAAAACTGCAATTCCATGGCAAGATGATGAACTCAACAACATTAATTACTAG MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKTAIPWQDDELNNINY* Homology
BLAST of CSPI06G01920 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-07 Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of CSPI06G01920 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.5e-07 Identity = 26/65 (40.00%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CSPI06G01920 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 2.3e-05 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0
BLAST of CSPI06G01920 vs. ExPASy Swiss-Prot
Match: Q9SJL2 (Heavy metal-associated isoprenylated plant protein 5 OS=Arabidopsis thaliana OX=3702 GN=HIPP05 PE=1 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 3.0e-05 Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of CSPI06G01920 vs. ExPASy Swiss-Prot
Match: Q9M8K5 (Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX=3702 GN=HIPP32 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 3.9e-05 Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 0
BLAST of CSPI06G01920 vs. ExPASy TrEMBL
Match: A0A0A0K8N1 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013360 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.5e-34 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of CSPI06G01920 vs. ExPASy TrEMBL
Match: A0A1S3C423 (superoxide dismutase 1 copper chaperone OS=Cucumis melo OX=3656 GN=LOC103496596 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 3.0e-32 Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of CSPI06G01920 vs. ExPASy TrEMBL
Match: A0A5D3C2A2 (Superoxide dismutase 1 copper chaperone OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001360 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.2e-30 Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of CSPI06G01920 vs. ExPASy TrEMBL
Match: A0A6J1BV52 (copper transport protein ATX1 OS=Momordica charantia OX=3673 GN=LOC111006024 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.2e-25 Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CSPI06G01920 vs. ExPASy TrEMBL
Match: A0A2C9VMM9 (HMA domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_07G136400 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 5.7e-23 Identity = 57/74 (77.03%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of CSPI06G01920 vs. NCBI nr
Match: XP_004138408.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucumis sativus]) HSP 1 Score: 154.1 bits (388), Expect = 5.1e-34 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of CSPI06G01920 vs. NCBI nr
Match: KAE8646572.1 (hypothetical protein Csa_004951, partial [Cucumis sativus]) HSP 1 Score: 147.9 bits (372), Expect = 3.6e-32 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CSPI06G01920 vs. NCBI nr
Match: XP_008456748.1 (PREDICTED: superoxide dismutase 1 copper chaperone [Cucumis melo]) HSP 1 Score: 147.1 bits (370), Expect = 6.2e-32 Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of CSPI06G01920 vs. NCBI nr
Match: KAA0052042.1 (superoxide dismutase 1 copper chaperone [Cucumis melo var. makuwa] >TYK04519.1 superoxide dismutase 1 copper chaperone [Cucumis melo var. makuwa]) HSP 1 Score: 141.0 bits (354), Expect = 4.4e-30 Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of CSPI06G01920 vs. NCBI nr
Match: XP_038884077.1 (copper transport protein ATX1 [Benincasa hispida]) HSP 1 Score: 141.0 bits (354), Expect = 4.4e-30 Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 0
BLAST of CSPI06G01920 vs. TAIR 10
Match: AT5G05365.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 107.1 bits (266), Expect = 6.6e-24 Identity = 51/70 (72.86%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of CSPI06G01920 vs. TAIR 10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 56.6 bits (135), Expect = 1.0e-08 Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of CSPI06G01920 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 1.8e-08 Identity = 26/65 (40.00%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CSPI06G01920 vs. TAIR 10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 50.8 bits (120), Expect = 5.6e-07 Identity = 23/62 (37.10%), Postives = 39/62 (62.90%), Query Frame = 0
BLAST of CSPI06G01920 vs. TAIR 10
Match: AT5G19090.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 49.3 bits (116), Expect = 1.6e-06 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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