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CSPI06G01790 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTTAATTACTCTAATCCCAACAAATCCATATATAAATACATATCCTTTGTTGTGAAAAATATGACAACATTGTTTCATTTTGGCATAATGAATGAAGAGCAAGAATGAGAGGTTGGCATGAAACTCGTTCTTCATCTTCTTGTGCAGCTTGCAAATTGTTGAAAAGAAGATGTATTCCCACTTGTATTTTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTTAGTAAGATTTTGACTGAAGTTCCTGAAGAACAGAGAGAAGATACTGTTAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTTAGAGATCCTGTTTACGGCTGCATTGGTGCTATAGCTTTGTTGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCTCTTGCTAAAGCTCGTCTCGCTCGTTACGCTAATAATAACACTTCCTCTTCTTCTTCTTCTTCTTCTTGTGTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTGAGTTTCTCTGCTGAGCAGAGTTCTTCTGATGATATCACCCAATATGGATATTTATGTGATTTCACCCATTTTCCTTATCCATTTAAAGCTTGAAACTTTGTGATCTCTCTTTCTCTCTGCCTCTATCATCAAGGTTTCTTCAAAGATTTTTCTTTTCTGTTTATGTATAATCAATCATCTGTTTATTCCCAACTCAATTCTTGTTTTTTTCAAGTATATTACTC CTCTCTTAATTACTCTAATCCCAACAAATCCATATATAAATACATATCCTTTGTTGTGAAAAATATGACAACATTGTTTCATTTTGGCATAATGAATGAAGAGCAAGAATGAGAGGTTGGCATGAAACTCGTTCTTCATCTTCTTGTGCAGCTTGCAAATTGTTGAAAAGAAGATGTATTCCCACTTGTATTTTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTTAGTAAGATTTTGACTGAAGTTCCTGAAGAACAGAGAGAAGATACTGTTAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTTAGAGATCCTGTTTACGGCTGCATTGGTGCTATAGCTTTGTTGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCTCTTGCTAAAGCTCGTCTCGCTCGTTACGCTAATAATAACACTTCCTCTTCTTCTTCTTCTTCTTCTTGTGTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTGAGTTTCTCTGCTGAGCAGAGTTCTTCTGATGATATCACCCAATATGGATATTTATGTGATTTCACCCATTTTCCTTATCCATTTAAAGCTTGAAACTTTGTGATCTCTCTTTCTCTCTGCCTCTATCATCAAGGTTTCTTCAAAGATTTTTCTTTTCTGTTTATGTATAATCAATCATCTGTTTATTCCCAACTCAATTCTTGTTTTTTTCAAGTATATTACTC ATGAGAGGTTGGCATGAAACTCGTTCTTCATCTTCTTGTGCAGCTTGCAAATTGTTGAAAAGAAGATGTATTCCCACTTGTATTTTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTTAGTAAGATTTTGACTGAAGTTCCTGAAGAACAGAGAGAAGATACTGTTAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTTAGAGATCCTGTTTACGGCTGCATTGGTGCTATAGCTTTGTTGCAGACTAAAATGGTGGAGCTTCAACATGATCTTGCTCTTGCTAAAGCTCGTCTCGCTCGTTACGCTAATAATAACACTTCCTCTTCTTCTTCTTCTTCTTCTTGTGTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTGAGTTTCTCTGCTGAGCAGAGTTCTTCTGATGATATCACCCAATATGGATATTTATGTGATTTCACCCATTTTCCTTATCCATTTAAAGCTTGA MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANNNTSSSSSSSSCVENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA* Homology
BLAST of CSPI06G01790 vs. ExPASy Swiss-Prot
Match: Q9SRL8 (LOB domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=LBD21 PE=2 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.0e-45 Identity = 95/124 (76.61%), Postives = 105/124 (84.68%), Query Frame = 0
BLAST of CSPI06G01790 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 8.1e-35 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of CSPI06G01790 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.8e-34 Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of CSPI06G01790 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3) HSP 1 Score: 146.0 bits (367), Expect = 4.0e-34 Identity = 69/108 (63.89%), Postives = 85/108 (78.70%), Query Frame = 0
BLAST of CSPI06G01790 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 3.4e-33 Identity = 72/122 (59.02%), Postives = 93/122 (76.23%), Query Frame = 0
BLAST of CSPI06G01790 vs. ExPASy TrEMBL
Match: A0A1S3B334 (LOB domain-containing protein 21-like OS=Cucumis melo OX=3656 GN=LOC103485585 PE=3 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 8.3e-91 Identity = 170/172 (98.84%), Postives = 171/172 (99.42%), Query Frame = 0
BLAST of CSPI06G01790 vs. ExPASy TrEMBL
Match: A0A5A7UN14 (LOB domain-containing protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001800 PE=3 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 5.9e-89 Identity = 169/172 (98.26%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of CSPI06G01790 vs. ExPASy TrEMBL
Match: A0A6J1JJ75 (LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111487426 PE=3 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 4.3e-79 Identity = 159/179 (88.83%), Postives = 165/179 (92.18%), Query Frame = 0
BLAST of CSPI06G01790 vs. ExPASy TrEMBL
Match: A0A6J1GN41 (LOB domain-containing protein 21-like OS=Cucurbita moschata OX=3662 GN=LOC111456020 PE=3 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.8e-77 Identity = 152/173 (87.86%), Postives = 161/173 (93.06%), Query Frame = 0
BLAST of CSPI06G01790 vs. ExPASy TrEMBL
Match: A0A6J1JS05 (LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111489259 PE=3 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 4.0e-77 Identity = 159/183 (86.89%), Postives = 162/183 (88.52%), Query Frame = 0
BLAST of CSPI06G01790 vs. NCBI nr
Match: XP_004138415.1 (LOB domain-containing protein 21 [Cucumis sativus] >KAE8646568.1 hypothetical protein Csa_005704 [Cucumis sativus]) HSP 1 Score: 346.3 bits (887), Expect = 1.5e-91 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CSPI06G01790 vs. NCBI nr
Match: XP_008441477.1 (PREDICTED: LOB domain-containing protein 21-like [Cucumis melo]) HSP 1 Score: 342.8 bits (878), Expect = 1.7e-90 Identity = 170/172 (98.84%), Postives = 171/172 (99.42%), Query Frame = 0
BLAST of CSPI06G01790 vs. NCBI nr
Match: KAA0055025.1 (LOB domain-containing protein 21-like [Cucumis melo var. makuwa]) HSP 1 Score: 336.7 bits (862), Expect = 1.2e-88 Identity = 169/172 (98.26%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of CSPI06G01790 vs. NCBI nr
Match: XP_038885630.1 (LOB domain-containing protein 21 [Benincasa hispida]) HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81 Identity = 161/175 (92.00%), Postives = 165/175 (94.29%), Query Frame = 0
BLAST of CSPI06G01790 vs. NCBI nr
Match: XP_022990592.1 (LOB domain-containing protein 21-like [Cucurbita maxima]) HSP 1 Score: 303.9 bits (777), Expect = 8.8e-79 Identity = 159/179 (88.83%), Postives = 165/179 (92.18%), Query Frame = 0
BLAST of CSPI06G01790 vs. TAIR 10
Match: AT3G11090.1 (LOB domain-containing protein 21 ) HSP 1 Score: 184.5 bits (467), Expect = 7.2e-47 Identity = 95/124 (76.61%), Postives = 105/124 (84.68%), Query Frame = 0
BLAST of CSPI06G01790 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 148.3 bits (373), Expect = 5.8e-36 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of CSPI06G01790 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 148.3 bits (373), Expect = 5.8e-36 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of CSPI06G01790 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 148.3 bits (373), Expect = 5.8e-36 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of CSPI06G01790 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 148.3 bits (373), Expect = 5.8e-36 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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