![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CSPI06G01700 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTCTCCCTAGCTTAGTTTTTCTTCTCCGGCGACGACCTCCCAGAAACTCAGGGGCAGCGGGGACGACGAGCATTCGTCTTCTCCGGCAACGGTGACTGCCCAGGCCACCGTGCAACTAAAGGGTAAAAGCACAATTTTACACAGATGCTGACATCAGCAAAAGAATATACAAAGTGGTCTCATTTCATTTGAGCCCAAAATTTTGGATCAAACAATCAAATTTCCCGCGCAGCAAACCCAAACCTATGCTTCGCGCGGGAGCTGCTGGATTTCTCTCTTTCCCACAAGTTTCTCTTTCGGAGGACAATTGAACCACCTCGCGACGACTGGTTTCCTTCGGAGGTTTGTGGTTCACGTGTCGATAACTTGGATTATCTTCCTTTCGCCGGGGAATCACGGTGGCACGAGTTAGCAGCAGCATTTCTCTTCTTTTTGTCGAACCCCGGCATTTACCCTCACTTAGTGTGGCTTCAAATCGAATTACCCACAGTCCATAAGGTTCCGATCTGCAAGTTTGGACACTTTCGAACACCGACCAACTAAGACCGGAGCTCTTCAGTGGTAGGATTCCCTGAGTAACTTTGCTCTAATTTGCTTCCGAATTAGATTTAGGTGTTTGAATTAGACTACAAGTCCTTGGAATTTTTCTATTGTTATGTTTGGGTCAATTTCGAATTATTGGATTAAGGTTCAATTAATATTAATGCACTTTGAACCCTCTCGAACTCTATTGAAGTATATTACATTAGTCTTCAATCTGTGGGTATTTTTTGTTTGTGGTTCTGGACGAATTTGAGATGGTCGATTGAGGTTTACGGTTGATTTTGGATTTGAATATCTCTCTTGAACAGTCTTTCAATTATGGTTACTGTTATTTATCCGAGTTCTAGCCTCTAAACCTTGTCTTTATTGTTTAGGCTTCTAAAAGTTGACGTTTGTTCAAGGAATTGAATTTTTGGATTGAGAATGGTTGGTCGTTGATCGGGGTAAGTAGTCTCCACATACTTTCCGGAAGATTAATTTTGGTTTAATTATGTTTTGACTATTGCGATTTGAAAAATGTTTGGAAGTAGTTTTGTATGATTTGAAATTCATCGAATTTAATTTGTATGCTTTAACGGTTTTACTATTTGAAAGTATGTTTGTCATTCTGGATCAGTTGAAATAAAATCGTTTCCATTGATTTCAGAATTGAAAGTAAGTTTGTTTTGGACCTTTTGGTTTTGATATATATGATATGAAAGTTATTGAAAAGTTTGAAAGATAGATTTTTTGAAATTACATGTTACGTTTCAATTTTTTATGATTATTTTTATCAATTCAATAAGGACTATTGGATATACGAAACTTTGTTTTGGGATCGTATGCTCATGTAGCAGCCAAGTTTGGGATAGACGGTAAATGATTTGATTGAAGCTTATTTGTAGAAAGGCACTTTATTGTGGTTTGGCATTCCTTTGTATTAAATATTTCAGTAGTTGTACTGAATGCTCTGGTTGATTGTGTTGAATTGAATACTCTGGTCGATTTTTAATTGACATAATCTGATTGAACGACTAGAGGATTGGTGTTACCAACAGGTAACCACACTTGTCTGGGCAACTCCAATTATGCATATTTTCCACTCTCTTAAATGAAAGAATTGATTGATTGAAAGCTATGCTAAATGAAGTATTGATCAATTGGAAGTTTTGTCTGATTGAAAATACTGATCGATTGAATGTTTTTATTTGTTAAAACTAATGAAAATTTTGTTCTATTAAAGTCTATTTGAACTTTTTTCTAGCGGAAGTTGTAAGTTTATTTGGAAGTTTTAGTCTAAAAATTTGGTTTTGAAAGCTTTAGTTTGAAACGTTCAGTTTAGGAAAGTTAACTAATTGAAAGATATTGGCTTTGATTGTAACGAAGTTTTTATTTGAAAGCTTTTCAAGGATTTGTATTTTTGGCTTGCATGAAAGAAAATAAATTTCAAAGCTTGATGTGGCAATTCCTTATGGAACATTTTTGTTCTCGTCTTTTGCTTTTTCTAAGTGTTTGCAAATGCAGGATCAGTGGCTTGTTCTGGAAGAAGTAAAGTATTTTGGCACAAGGCACCGGAAGATTTATTTTGATAAATATTTTATTATTTTTAAATGTTTGAATTTGATAATTTATCTTAGAAATTGTTTGCAAGTAATTGCTTTTGCCGAGTAATGTAAGTTGTTATAGTCTGCATTTTGGAAAGTACAATCTGTTACACACTTACCATTTGATTTTTGAACATTGTGTTCGTTTTCTCTCCATTTTTCTTAGAATGATGCTCATCTTTCTTAAAGTAACATTCAAATTTTTAGTCAAATTTCAAAAACAAAAACAAATTTTATGAACTATTTTTTTTAGTTTTCAAAACATAGCATGAATTTTGAAAACATTGATAGAAAGTAGATTGCAAAACAAAGAAACTCATTGGTGGAAGTAGTGGATGTAAGCTTAATTTTCAAAAACGAAACGGTTGATTTCCAACTAAATATTTAATATAGAAGTACTTGGTGATGGTTGAAAATAATATATTAATTTGGAAGTTTGAGTAAATCTCTTGCAGAGGTATTGAACATTGGATTGGAGGACGTGTTGAATGCTCTCAGAAATGACAAGTTATTATGATATTGATGACATTCTTGCAGAGGAAGAGGTCAATATCTTATCCTTTTACCTAATAAAGTTTAATCAACTTGCAAAATCAATATTGAGTCTTTGTCTTGACAGCTTGTCTCAGTTGTGTTCCAAAAAGCTGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCTGTGAGTTCCAGAGATTAATAGAGGTATGTTACGAATGTTGAATAGAAAACTTATATTTTCTTATTTGGTGTAATTTCAGGTTGAATCTGGATCCAAAGTAGAGCTACCCTTTTGGCTTGCACAAGAGCTTCATCTGAGACAAGTGGCAGTTATGGCCTTACCTTCCTGTTTTAACCAAAGGTAGATAGCCACTACATTTAAGCTCTACAACCAATAATTTCAGTAACTTCGGGTGTTCTGGAATTTTTTGGAAGCTTAAGAGGAGGATTTTATTTACTATGTCCCCATTTCCTAATAGCTGACACGAAAAGATACTGATTTTTTATTCTTTTTCCTCTAATTCTGTCATTGCATAATTCATTATTATGTGTAATTGTGTTGTTTCCCATCTGGCTGGTGCATAGGTCTCATGGATTGCATTTTTTTGGTCTGCTAATTATTTGAGGATGAACTTGTGAATTGGAATCCGTAGAGTACAGACATTAGTAAGATTTGATTTGGTCATTTTTAAAGTTAATCGTGTTATTATTTTTAACTTATTTTCATTACTCCTTTCGATTGCTGATGAATTACATTTACATGGGAGACAAATGATGTTAATGGCCTTACCTTCCAATTTCATTTATCAAAACAAAAGTTATGGTTTTTTCTCCTTGATACTGTCCTGATGATCTGTTTTGGTCATGAAATTGTCGTATTCCAAACTTTTTGAGATTAGTTTATATAATCTCTTTTAGAATGCTCGCACTTGCTGCATAAGAGATCACGCCCAAAGAAAAGTTTTTTTTTTGGTGTTGTTTTCCAAACCTTCGTGTGGCTCAAATTTTCCATTTACTCACTACTTTATTACTAGTAGAAACTTCCTGCATTAGAATCTCATGATTAAAGGAACCAGTAAGACTCTGATGATGACATTTATTCTTATATATATTGAAAATATGATGATATTTGTAGCTGACCAGTGCTCTTGTTCTCTTACTAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGGTCTAGATGTCAATTCTTCTATGAATTTGGATGCAAGATTGCACCTTTGTGAGTATCCTGAGATCCAACACTTCAGGATGTAAATCATGATTCTTTTATGAGAAGAAAATTTTATATTGCTGCCTTGCCTATTAATTTAGGTGACGTCACACTTATGGCCATTGAAATTGAAAGCGTTTATGTGCCCTTTCATTTGAAATACATTTGTACTCTAATAAGCATGACTTGTTTTCACCTTTGCCAGAAGTAGCCTTCTGGAGACATGGCATTTAAAAAATCATTTCTCAAACATAACAATTAGGTTATCTGGAGATGTGACTAGTTATTTACTGCAGTCTAACTGACTTATAAAACGATCTATTTAAACTTGTTTATTAAGCATGTTGGTTGGACATCCTACCAAGGATCTTGTATTTAGGCTTGACTGTGATCTGGCTAGCATGTTACCATCTCAAGTTTTGGATCTCAATGAATATCAATCTCAATTTCATTCCATTGTATATTTAGATTGATAAATATGCACAGATTTTAAACTATCTTGTAAGTAGCGCTTGTTGCCTTGGAGTGCATGTAGGATGTCTGTTTCGTTGGGGTGTGCTGTACCAAATTGTGGTTTGTAAGATTTGTTAAGTGTACCTAAATGGAAGAGAACACAGTAGATTAAATATATCTCTCGTTTTTCTTTCAAATGTTGTTTTGTTTTATTAGTACAAACAACGGAGTACGAGGATTTGAACCTTCAAGCTCAAGAGTATAGATCAATTATAGTTGAGGTAGTTCATGGTGACTTAAAAGTGGATTATTCTAACTTCTCATTACAAACTTCATTGTCAGGGTTGGTGATAGAACAATCGGTTCTTGGCTTCTATCAACGTTCAAGAGTAGGTACAAGGAAGTTCTTACGAAGGCTCACAGTGCAGTCTTTGCTGCAAGTTCAAAATATTTGGCACTTCTGTCAAAAGAAGAAACCAAAAGTGAGATATTTGTTAGATGTTTCGTGTGTCTCTTGTTTCCACATTTAGTAATTCTCTTCAAACTCAAATCAATATAACAATCCATATTTTGTGCAGTGTATGAAGCAGCTCAATCCTCCATGACAGCCTTCAAGAAATGGAGAATGGGTGGACCTAGATTCCAGAGAGCATCCTTTCTAAGCAGGAAGAGGAAGTCAACTGAGTAGCCACTAAGTTTGTATCCCCCTTCCTGCAAAAGTAGTCAGTTTTTCCTAATTTGCTTATATTTATTTCATGAGTAATTTCGATGTTTACTTTCTTTTTTATAAATT AATTCTCCCTAGCTTAGTTTTTCTTCTCCGGCGACGACCTCCCAGAAACTCAGGGGCAGCGGGGACGACGAGCATTCGTCTTCTCCGGCAACGGTGACTGCCCAGGCCACCGTGCAACTAAAGGGTAAAAGCACAATTTTACACAGATGCTGACATCAGCAAAAGAATATACAAAGTGGTCTCATTTCATTTGAGCCCAAAATTTTGGATCAAACAATCAAATTTCCCGCGCAGCAAACCCAAACCTATGCTTCGCGCGGGAGCTGCTGGATTTCTCTCTTTCCCACAAGTTTCTCTTTCGGAGGACAATTGAACCACCTCGCGACGACTGGTTTCCTTCGGAGGTTTGTGGTTCACGTGTCGATAACTTGGATTATCTTCCTTTCGCCGGGGAATCACGGTGGCACGAGTTAGCAGCAGCATTTCTCTTCTTTTTGTCGAACCCCGGCATTTACCCTCACTTAGTGTGGCTTCAAATCGAATTACCCACAGTCCATAAGGTTCCGATCTGCAAGTTTGGACACTTTCGAACACCGACCAACTAAGACCGGAGCTCTTCAGTGGCTTCTAAAAGTTGACGTTTGTTCAAGGAATTGAATTTTTGGATTGAGAATGGTTGGTCGTTGATCGGGAGGTATTGAACATTGGATTGGAGGACGTGTTGAATGCTCTCAGAAATGACAAGTTATTATGATATTGATGACATTCTTGCAGAGGAAGAGCTTGTCTCAGTTGTGTTCCAAAAAGCTGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTTTGGCTTGCACAAGAGCTTCATCTGAGACAAGTGGCAGTTATGGCCTTACCTTCCTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGGTCTAGATGTCAATTCTTCTATGAATTTGGATGCAAGATTGCACCTTTGGTTGGTGATAGAACAATCGGTTCTTGGCTTCTATCAACGTTCAAGAGTAGGTACAAGGAAGTTCTTACGAAGGCTCACAGTGCAGTCTTTGCTGCAAGTTCAAAATATTTGGCACTTCTGTCAAAAGAAGAAACCAAAATGTATGAAGCAGCTCAATCCTCCATGACAGCCTTCAAGAAATGGAGAATGGGTGGACCTAGATTCCAGAGAGCATCCTTTCTAAGCAGGAAGAGGAAGTCAACTGAGTAGCCACTAAGTTTGTATCCCCCTTCCTGCAAAAGTAGTCAGTTTTTCCTAATTTGCTTATATTTATTTCATGAGTAATTTCGATGTTTACTTTCTTTTTTATAAATT ATGCTCTCAGAAATGACAAGTTATTATGATATTGATGACATTCTTGCAGAGGAAGAGCTTGTCTCAGTTGTGTTCCAAAAAGCTGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTTTGGCTTGCACAAGAGCTTCATCTGAGACAAGTGGCAGTTATGGCCTTACCTTCCTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGGTCTAGATGTCAATTCTTCTATGAATTTGGATGCAAGATTGCACCTTTGGTTGGTGATAGAACAATCGGTTCTTGGCTTCTATCAACGTTCAAGAGTAGGTACAAGGAAGTTCTTACGAAGGCTCACAGTGCAGTCTTTGCTGCAAGTTCAAAATATTTGGCACTTCTGTCAAAAGAAGAAACCAAAATGTATGAAGCAGCTCAATCCTCCATGACAGCCTTCAAGAAATGGAGAATGGGTGGACCTAGATTCCAGAGAGCATCCTTTCTAAGCAGGAAGAGGAAGTCAACTGAGTAG MLSEMTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE* Homology
BLAST of CSPI06G01700 vs. ExPASy Swiss-Prot
Match: Q0UPV4 (DNA replication complex GINS protein PSF3 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=PSF3 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.6e-15 Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 0
BLAST of CSPI06G01700 vs. ExPASy Swiss-Prot
Match: Q4WQ54 (DNA replication complex GINS protein psf3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=psf3 PE=3 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 8.7e-14 Identity = 46/170 (27.06%), Postives = 83/170 (48.82%), Query Frame = 0
BLAST of CSPI06G01700 vs. ExPASy Swiss-Prot
Match: Q7ZT01 (DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13 Identity = 55/196 (28.06%), Postives = 93/196 (47.45%), Query Frame = 0
BLAST of CSPI06G01700 vs. ExPASy Swiss-Prot
Match: Q9UTC3 (DNA replication complex GINS protein psf3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=psf3 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 6.9e-11 Identity = 40/117 (34.19%), Postives = 63/117 (53.85%), Query Frame = 0
BLAST of CSPI06G01700 vs. ExPASy Swiss-Prot
Match: Q54EH6 (Probable DNA replication complex GINS protein PSF3 OS=Dictyostelium discoideum OX=44689 GN=gins3 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 9.0e-11 Identity = 42/163 (25.77%), Postives = 82/163 (50.31%), Query Frame = 0
BLAST of CSPI06G01700 vs. ExPASy TrEMBL
Match: A0A0A0K8J6 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011640 PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.0e-97 Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0
BLAST of CSPI06G01700 vs. ExPASy TrEMBL
Match: A0A1S3B3H3 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103485572 PE=3 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 1.9e-96 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CSPI06G01700 vs. ExPASy TrEMBL
Match: A0A5A7UGU7 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002360 PE=3 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 1.9e-96 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CSPI06G01700 vs. ExPASy TrEMBL
Match: A0A6J1BYI2 (DNA replication complex GINS protein PSF3-like OS=Momordica charantia OX=3673 GN=LOC111006426 PE=3 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 7.7e-90 Identity = 170/185 (91.89%), Postives = 177/185 (95.68%), Query Frame = 0
BLAST of CSPI06G01700 vs. ExPASy TrEMBL
Match: A0A6J1HEE0 (DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=LOC111462725 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.0e-89 Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of CSPI06G01700 vs. NCBI nr
Match: XP_004138422.1 (DNA replication complex GINS protein PSF3 isoform X1 [Cucumis sativus] >KGN45788.1 hypothetical protein Csa_005301 [Cucumis sativus]) HSP 1 Score: 365.9 bits (938), Expect = 2.1e-97 Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0
BLAST of CSPI06G01700 vs. NCBI nr
Match: XP_008441464.1 (PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo] >XP_008441465.1 PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo]) HSP 1 Score: 361.7 bits (927), Expect = 3.9e-96 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CSPI06G01700 vs. NCBI nr
Match: KAA0055042.1 (DNA replication complex GINS protein PSF3-like [Cucumis melo var. makuwa] >TYK24435.1 DNA replication complex GINS protein PSF3-like [Cucumis melo var. makuwa]) HSP 1 Score: 361.7 bits (927), Expect = 3.9e-96 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CSPI06G01700 vs. NCBI nr
Match: XP_038885801.1 (DNA replication complex GINS protein PSF3-like [Benincasa hispida] >XP_038885802.1 DNA replication complex GINS protein PSF3-like [Benincasa hispida]) HSP 1 Score: 355.1 bits (910), Expect = 3.7e-94 Identity = 181/189 (95.77%), Postives = 185/189 (97.88%), Query Frame = 0
BLAST of CSPI06G01700 vs. NCBI nr
Match: XP_022134062.1 (DNA replication complex GINS protein PSF3-like [Momordica charantia]) HSP 1 Score: 339.7 bits (870), Expect = 1.6e-89 Identity = 170/185 (91.89%), Postives = 177/185 (95.68%), Query Frame = 0
BLAST of CSPI06G01700 vs. TAIR 10
Match: AT1G19080.1 (GINS complex protein ) HSP 1 Score: 254.6 bits (649), Expect = 6.3e-68 Identity = 125/184 (67.93%), Postives = 144/184 (78.26%), Query Frame = 0
BLAST of CSPI06G01700 vs. TAIR 10
Match: AT1G19080.2 (GINS complex protein ) HSP 1 Score: 254.6 bits (649), Expect = 6.3e-68 Identity = 125/184 (67.93%), Postives = 144/184 (78.26%), Query Frame = 0
BLAST of CSPI06G01700 vs. TAIR 10
Match: AT3G55490.1 (GINS complex protein ) HSP 1 Score: 254.6 bits (649), Expect = 6.3e-68 Identity = 125/184 (67.93%), Postives = 144/184 (78.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|