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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGTGAAATGAACCGGGGAAAATTCGGTTCGGTTTTCGCATTATTGACCGACCGACTCAAATCTAGTTTGTTTCAGCACAGACCCAGAGGGTCTATTCGTATTCATTTTCCTCCGCAGCACTGGACTTTCTTCGACTCGTCACACTCTGACACCGCGACGTCCACATCGGAGAAGCTGAGTGCTTCTGCCTCTCATTTGCTAACATCGGCACTAACTGCGTCGACTTCGGAAAAGTGACGCTCGTCGGACTCTCCCCGTTGAAAAGCTTTCTGGTTCAACCATCGGTCCCCATTGTTGTTTTGTTTGCTGATATTTCAATTTTCAGGTAATTTCATTATATTACAGAGGTATTTAAATGGACTTATTTTATTGACCCAATAATGAATTTTGTTGTTCTTGTGGTGGGGAAATCTTTGTTGGCTTTAAATTGAGTTTTTTGTTGTTAGGCCGTAGATTGTTTGTTATAGGGAAGGAAAATCAAGAATTTGGTACAAATGTTTATTTGTTTATGTCTATAATTATACTTGAGGAAGTCAGCCGCAATTTGAAAAAAAAAAGAGAGTAAAATATGGGAGGAGAGAGACAGGGGAAAGGATAGAACGTTTTTTTTTCTTCTTTTTTGTGCGGATGACCGTCATTTTGGATGGTTAATGCCGTTTTCCGTAATGAGAGCTCAGAGTGAGTGTTGGAGTGAGAAGTAGTGCGAGCACCAGGGAGGAAGAACCCTAGTCTATGAGAGCATTGTTGCATTAGATTAGTTGAAAAACGAGCTGCAGCGCAATGGAGGGATGGGGATGGAAGAAGGAAGAGTTCTAACTTGTAGGAGCACTATTGTACAAACAACTCAAGAACGAAAACTTATAAAAAACAGTATGAGTTTTCACTGCCCTTCTTCTATTTGTTGAACATGAGGTTTCATCTAAGAAATAATTGGCAATGAGAGGAGTAGCTTATTTATTTCATAAGGAGTTGAGGTCTCTTGAATTTTCTAATGTAGGATTCTCAATGTGCCTCCAAGATGGTTGTTCTTTTGGGTTCACTATTTTTTATTGGAACACAATTTCTTTTTATTAGACCAAATACTTGTTTGGGCTTTATGAACTCTAATACTATGATAACATGGGGTTTCAGCTTTAACCTAATTGGCAATAAGAAGAAGAGTAGCTCAACTATCTTATAAGGAGTGTGAAGAAGCCCCTTGAATTTTCCACGTGGGATCCTCAGCATCTCCTTCCTTTCTCAATCTGATAAAAAATCACTCTCTTCATATTGATACTGACGTATTCCCATTCTGCTTCT mRNA sequence ATGGGTGAAATGAACCGGGGAAAATTCGGTTCGGTTTTCGCATTATTGACCGACCGACTCAAATCTAGTTTGTTTCAGCACAGACCCAGAGGGTCTATTCGTATTCATTTTCCTCCGCAGCACTGGACTTTCTTCGACTCGTCACACTCTGACACCGCGACGTCCACATCGGAGAAGCTGAGTGCTTCTGCCTCTCATTTGCTAACATCGGCACTAACTGCGTCGACTTCGGAAAAGTGACGCTCGTCGGACTCTCCCCGTTGAAAAGCTTTCTGGTTCAACCATCGGTCCCCATTGTTGTTTTGTTTGCTGATATTTCAATTTTCAGCTTTAACCTAATTGGCAATAAGAAGAAGAGTAGCTCAACTATCTTATAAGGAGTGTGAAGAAGCCCCTTGAATTTTCCACGTGGGATCCTCAGCATCTCCTTCCTTTCTCAATCTGATAAAAAATCACTCTCTTCATATTGATACTGACGTATTCCCATTCTGCTTCT Coding sequence (CDS) ATGGGTGAAATGAACCGGGGAAAATTCGGTTCGGTTTTCGCATTATTGACCGACCGACTCAAATCTAGTTTGTTTCAGCACAGACCCAGAGGGTCTATTCGTATTCATTTTCCTCCGCAGCACTGGACTTTCTTCGACTCGTCACACTCTGACACCGCGACGTCCACATCGGAGAAGCTGAGTGCTTCTGCCTCTCATTTGCTAACATCGGCACTAACTGCGTCGACTTCGGAAAAGTGA Protein sequence MGEMNRGKFGSVFALLTDRLKSSLFQHRPRGSIRIHFPPQHWTFFDSSHSDTATSTSEKLSASASHLLTSALTASTSEK*
Homology
BLAST of CSPI06G01580 vs. ExPASy TrEMBL
Match: A0A0A0KAB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G011050 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 Query: 1 MGEMNRGKFGSVFALLTDRLKSSLFQHRPRGSIRIHFPPQHWTFFDSSHSDTATSTSEKL 60 MGEMNRGKFGSVFALLTDRLKSSLFQHRPRGSIRIHFPPQHWTFFDSSHSDTATSTSEKL Sbjct: 1 MGEMNRGKFGSVFALLTDRLKSSLFQHRPRGSIRIHFPPQHWTFFDSSHSDTATSTSEKL 60
Query: 61 SASASHLLTSALTASTSEK 80 SASASHLLTSALTASTSEK Sbjct: 61 SASASHLLTSALTASTSEK 79
BLAST of CSPI06G01580 vs. NCBI nr
Match: KGN45779.1 (hypothetical protein Csa_005257 [Cucumis sativus]) HSP 1 Score: 154.8 bits (390), Expect = 3.1e-34 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 Query: 1 MGEMNRGKFGSVFALLTDRLKSSLFQHRPRGSIRIHFPPQHWTFFDSSHSDTATSTSEKL 60 MGEMNRGKFGSVFALLTDRLKSSLFQHRPRGSIRIHFPPQHWTFFDSSHSDTATSTSEKL Sbjct: 1 MGEMNRGKFGSVFALLTDRLKSSLFQHRPRGSIRIHFPPQHWTFFDSSHSDTATSTSEKL 60
Query: 61 SASASHLLTSALTASTSEK 80 SASASHLLTSALTASTSEK Sbjct: 61 SASASHLLTSALTASTSEK 79
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KAB5 | 1.5e-34 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G011050 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN45779.1 | 3.1e-34 | 100.00 | hypothetical protein Csa_005257 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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