CSPI06G01430 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G01430
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-CH-type domain-containing protein
Location	Chr6: 1024955 .. 1028240 (-)
RNA-Seq Expression	CSPI06G01430
Synteny	CSPI06G01430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGATTTATATTTCCCTTCCAACAATGATTTGGATGATCACGTTTTCTACTTTTTCTTTTTGAGTGAAGAAAAAAGAAAAGGAAAAAGAAGAAGTTGAATGATGCTCTCTGCATTATGCAGTCCAAAAATTGTCTCCAAAATCTTTCGTCGTCTTCTTCCTCTCTGCAACAACTCTGTTTTTTGCTGCACATCGCCACTGACACCCCAACAAAGCCGCTGAAACAGGGGACACCCACCACTCTTTCTTCTTCTACTTCTCACTCCATTACTCATTAATCATCACACCCTAAATCAAGTTTTTTCCTTCATGGGTCTCCTTTCTCTCTCCCCCCATTCTTCCTTTTCGCCTCACATACCCATTACATGAGGATTCTCTTTCTGGGTCTTTGCGATGACGACCGTCCAAGCCTCCCACGTTGTCGCAATGGATGTAGAACAACACCAACAACGCCCTCGCACTGACTCCGATGATGTGCGGCGGTGTTCGGTCCACTCCAGGGCTGACATTCTGGAGGAAGATGGGGTGGCGGCGGCGGCGGCGGTGGAGAAAAGAAGGGCATCCTCTGTGTCGGAGTGCTCTGTTGAGATGGATCTCGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAAGGATTGCAGGATTTGTCATCTGAGTTTGGACGCTTCTAATCATGAATCTGGAATCCCTATTGAGCTGGGTTGTTCTTGTAAAGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATGTAAGTTTTTTCAAATTGAATGACACCTAATGTTTCTTGCTTTCAAGTTCACTTCTTGTCTTCATTTACTTTTCAATTCCTTGGATATAATTATTGATACCACTATAAACATACCTGGAATCTGGAATACCAACCTTGTTTTCTTCGATTTAATCTTGTAGTTCAAATTTCCCTATTCCTCATGGTGTTTTTGTTTTTATTTTAGCGTTCCCTTTTCTCTTTTCTGACTACTCTTGAAGTTTGTCTTCTACTTAAAAGTTGTGGACCTGTGGTTGACTTCTGTTACTCTTGGTGTTTTAGTAATGTTAAAGAATTTGGGTTGTATTTGTGTTTGATCCTGTCAAGATAGCCTTCTTTGACTAAAAAGGACTAATTCCTGACCTTGTGTCTGCAAAACAGCTTAATCCAAATGCTAAAGAATTGAGACTATGTATTCATTTTTATTTTTGCTTCTGCCTTATGAAATAGTGGTGCCGTTATAAATCCTCGGCCTTTTTTAGGATCCACGTATTCGTTTCCTGTTAAAGATCAAAGCCAAAACACAATGTGTTTCTTTGTAAAAGAAGTTGGATTTTGCATTGGACGATATGAAACCGATTGGAGGTGTTTCTTGATTTAGAACTTTTGCCTTCTGTCTTGTAGAAAAGGCTTATTTCTTTAGCCTATAATTTGCTTGCTTTAGTTGGATGTAATATTTGATTAGAGCACATTTTCTTAGCAGAGTTCAAATGTTTGAATATTCTTTTTTCAACATATTGTGTCCTTTTTGTTTTTGCCTTTCTGGTCAACTTTAGTGTGAAGTTTGAAACAGTGGAAAAAAAATTCATAACCTTTGCTGCATATTCTTTATTACTTCATTGCATGATGTTGTTATCTACAAAAATATATGGAATCAACATTTATTCCTAAAAAGACCAATCAGTGAGATTCTTTGTTTCTTTTTAACCATTCCTTTATCAGTTCGAACTGTCCTACAGAAGATGTTACAAAAATTAATACAGACATTATTTATGATACAATATAGAAAGGTTTTGTTTTGAGTTTTAAACATCTTTCTTCGAGGTTTAACCTATATTTACATCTCCACAAGTTCCATGATCGGCATAGCTGTCAATATTCATGTCATCCTTTGTTCAGAATGATTTATACTTGTATGCACAAAGATAGAGTTTCAGTTTGAGGTTGATTGTTATTTCATTTCACCACTCTCAAATCACCATTCAAGACTGTGAAGCTAGTTTGGCTGTCGAATAATTCACGGTATCGAACATGTGAGATACAATATTTGTATGTGATTATTTCCTCATTCATTATACTGCAACCTGGAGTAAGTATGGCTATATGAAACCTCTTTCCATTTTCAAGTTTGTTGATTGATTAAAGCTTATTACATACAGATGACGGTCAAAAGGGTGTGTAGACTGTAAGAAGCTAAAAAACTATCTTCACTCTATCTTCTGCATAAATTGAACATATTTTTCCCATGATGAATACAGTGAGCATATTGAAAGAATTGAATCGTAATAGTTTGGTTTGTGAAGAACTTTATTCCATTTGACCCTGCTATGAACCATATATAGTTTGGCCAGGAAAACTTTTCACTATTAGAGAGTGCTGTATAACTAGAAAACTTGTTTGTGATTCATGTTATTCTATTAGCTGACTATGGTGTATAAAGAAATTTGAAAGTTATGTTATCTGGAATATAAGACGAGGGAAAAAGCAAATACTGTTCAAACTTGGAAAAGCTCAACAACCTTGCACTGATCCATTTGTAATTTGTTACAGCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGGTACTTATGAAGCCGATTCAACAGAGCAACGCAATGAACCAAACGAAGCAACAACAGCAACTGCTACAGCTGCTATCGTGATGCCACCACACTCTACAGAGGCACGAAACTTCTGGCAAGGCCACAGGTTCCTGAACTTCTTACTCGCCTGCATGGTTTTTGCCTTCGTCATATCATGGCTATTTCACTTCAAAATACCCTCATAATTATGGAAAAGAAAACTATATTTGAAAAGTAGCATCAAAGGCTTGTCGAAAATCTTCATCGTCCTCTCTTCATTCTGCAATGCCTTCACTGAAACAAGCTCGAAAGATCAACTAGATTGCACGGTTACCGGCTTGGGATTGTGATTACAAATATTCTGTTAATATATATTAGTATTAGAGAACCTTGGAGGAAGAGTTTGGCTTTTGTAACATGTAAGATGTATAATGAAATTGTTTGTTAGTTTATATTGTATTATTGGGCTCAGCCTAGCTGGATTGGCCATCTCAATTGTTCGTGCTGTTTGTCTCTTGTCGTTTCATTGTGGATAATTCTCTGTTGAGATTCCGACATGTAGTTCCTTCTATAACAACAAAATCGGATTTGGGTCTCCAAATAATGTATGTTAAGAAAAAAAGGCAGAAATGTTTGATCAAATCAAATATCATATAAAATATTTTG

mRNA sequence

AAAAAAGATTTATATTTCCCTTCCAACAATGATTTGGATGATCACGTTTTCTACTTTTTCTTTTTGAGTGAAGAAAAAAGAAAAGGAAAAAGAAGAAGTTGAATGATGCTCTCTGCATTATGCAGTCCAAAAATTGTCTCCAAAATCTTTCGTCGTCTTCTTCCTCTCTGCAACAACTCTGTTTTTTGCTGCACATCGCCACTGACACCCCAACAAAGCCGCTGAAACAGGGGACACCCACCACTCTTTCTTCTTCTACTTCTCACTCCATTACTCATTAATCATCACACCCTAAATCAAGTTTTTTCCTTCATGGGTCTCCTTTCTCTCTCCCCCCATTCTTCCTTTTCGCCTCACATACCCATTACATGAGGATTCTCTTTCTGGGTCTTTGCGATGACGACCGTCCAAGCCTCCCACGTTGTCGCAATGGATGTAGAACAACACCAACAACGCCCTCGCACTGACTCCGATGATGTGCGGCGGTGTTCGGTCCACTCCAGGGCTGACATTCTGGAGGAAGATGGGGTGGCGGCGGCGGCGGCGGTGGAGAAAAGAAGGGCATCCTCTGTGTCGGAGTGCTCTGTTGAGATGGATCTCGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAAGGATTGCAGGATTTGTCATCTGAGTTTGGACGCTTCTAATCATGAATCTGGAATCCCTATTGAGCTGGGTTGTTCTTGTAAAGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGGTACTTATGAAGCCGATTCAACAGAGCAACGCAATGAACCAAACGAAGCAACAACAGCAACTGCTACAGCTGCTATCGTGATGCCACCACACTCTACAGAGGCACGAAACTTCTGGCAAGGCCACAGGTTCCTGAACTTCTTACTCGCCTGCATGGTTTTTGCCTTCGTCATATCATGGCTATTTCACTTCAAAATACCCTCATAATTATGGAAAAGAAAACTATATTTGAAAAGTAGCATCAAAGGCTTGTCGAAAATCTTCATCGTCCTCTCTTCATTCTGCAATGCCTTCACTGAAACAAGCTCGAAAGATCAACTAGATTGCACGGTTACCGGCTTGGGATTGTGATTACAAATATTCTGTTAATATATATTAGTATTAGAGAACCTTGGAGGAAGAGTTTGGCTTTTGTAACATGTAAGATGTATAATGAAATTGTTTGTTAGTTTATATTGTATTATTGGGCTCAGCCTAGCTGGATTGGCCATCTCAATTGTTCGTGCTGTTTGTCTCTTGTCGTTTCATTGTGGATAATTCTCTGTTGAGATTCCGACATGTAGTTCCTTCTATAACAACAAAATCGGATTTGGGTCTCCAAATAATGTATGTTAAGAAAAAAAGGCAGAAATGTTTGATCAAATCAAATATCATATAAAATATTTTG

Coding sequence (CDS)

ATGACGACCGTCCAAGCCTCCCACGTTGTCGCAATGGATGTAGAACAACACCAACAACGCCCTCGCACTGACTCCGATGATGTGCGGCGGTGTTCGGTCCACTCCAGGGCTGACATTCTGGAGGAAGATGGGGTGGCGGCGGCGGCGGCGGTGGAGAAAAGAAGGGCATCCTCTGTGTCGGAGTGCTCTGTTGAGATGGATCTCGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAAGGATTGCAGGATTTGTCATCTGAGTTTGGACGCTTCTAATCATGAATCTGGAATCCCTATTGAGCTGGGTTGTTCTTGTAAAGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGGTACTTATGAAGCCGATTCAACAGAGCAACGCAATGAACCAAACGAAGCAACAACAGCAACTGCTACAGCTGCTATCGTGATGCCACCACACTCTACAGAGGCACGAAACTTCTGGCAAGGCCACAGGTTCCTGAACTTCTTACTCGCCTGCATGGTTTTTGCCTTCGTCATATCATGGCTATTTCACTTCAAAATACCCTCATAA

Protein sequence

MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDGVAAAAAVEKRRASSVSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS*

Homology

[Close]

BLAST of CSPI06G01430 vs. ExPASy TrEMBL
Match: A0A0A0K8G0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009420 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.0e-115
Identity = 212/215 (98.60%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDG--VAAAAAVEKRRASS 60
           MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDG  VAAAAAVEKRR SS
Sbjct: 1   MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDGVAVAAAAAVEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 214
           EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of CSPI06G01430 vs. ExPASy TrEMBL
Match: A0A1S3B429 (uncharacterized protein LOC103485546 OS=Cucumis melo OX=3656 GN=LOC103485546 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.6e-112
Identity = 205/215 (95.35%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDG--VAAAAAVEKRRASS 60
           MTTVQASHVVAM+VEQHQQ PRTDSD+VRRCSVHSRADILEE+G  VA AAA EKRR SS
Sbjct: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIE+DCRICHLSLDASNHESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 214
           EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of CSPI06G01430 vs. ExPASy TrEMBL
Match: A0A5A7TJA4 (E3 ubiquitin-protein ligase MARCH8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001630 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.7e-96
Identity = 180/207 (86.96%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 1   MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDG--VAAAAAVEKRRASS 60
           MTTVQASHVVAM+VEQHQQ PRTDSD+VRRCSVHSRADILEE+G  VA AAA EKRR SS
Sbjct: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIE+DCRICHLSLDASNHESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISW 206
           EARNFWQGH      ++ +    ++S+
Sbjct: 181 EARNFWQGHSLAGLAISIVRAVCLLSF 207

[Close]

BLAST of CSPI06G01430 vs. ExPASy TrEMBL
Match: A0A6J1FEB0 (uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC111444740 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90
Identity = 174/222 (78.38%), Postives = 188/222 (84.68%), Query Frame = 0


Query: 1   MTTVQASHVVAMDVEQHQQRPRTD---------SDDVRRCSVHSRADILEEDGVAAAAAV 60
           MTT Q SHVVAM+V + +Q  RT          S+DVR+CS  SRA+I+        AA 
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIV-------GAAA 60

Query: 61  EKRRASSVSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCK 120
           EKRR SSVSECSVEMDLECGLAEIK+HL K+E+DCRICHLSLDASN ESGIPIELGCSCK
Sbjct: 61  EKRRESSVSECSVEMDLECGLAEIKLHLTKMERDCRICHLSLDASNQESGIPIELGCSCK 120

Query: 121 DDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAI 180
           DDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVT TYE DSTEQRN+ N+ATTATA AA+
Sbjct: 121 DDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYEPDSTEQRNDSNDATTATAAAAV 180

Query: 181 VMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 214
           V+PPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of CSPI06G01430 vs. ExPASy TrEMBL
Match: A0A6J1GZN3 (uncharacterized protein LOC111458938 OS=Cucurbita moschata OX=3662 GN=LOC111458938 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.7e-90
Identity = 171/222 (77.03%), Postives = 188/222 (84.68%), Query Frame = 0


Query: 1   MTTVQASHVVAMDVEQHQQRPRTD---------SDDVRRCSVHSRADILEEDGVAAAAAV 60
           M+T++ +HVVAM+ E+ ++  R           SDDVRRCSV S A+I+       AAAV
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEIV------GAAAV 60

Query: 61  EKRRASSVSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCK 120
           EKRR SSVSECSVEMDLECGL EIKVHLAK+E+DCRICHLSLDA+NHESGIPIELGCSCK
Sbjct: 61  EKRRGSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCK 120

Query: 121 DDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAI 180
           DDLAAAHKHCAEAWFK+KGDITCEICGSIAHNVT T EADSTEQ NE N+ TTAT  AA+
Sbjct: 121 DDLAAAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAV 180

Query: 181 VMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 214
           V+PPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216

[Close]

BLAST of CSPI06G01430 vs. NCBI nr
Match: XP_004138437.1 (uncharacterized protein LOC101207404 [Cucumis sativus] >KGN45763.1 hypothetical protein Csa_004857 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 4.2e-115
Identity = 212/215 (98.60%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDG--VAAAAAVEKRRASS 60
           MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDG  VAAAAAVEKRR SS
Sbjct: 1   MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDGVAVAAAAAVEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 214
           EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of CSPI06G01430 vs. NCBI nr
Match: XP_008441426.1 (PREDICTED: uncharacterized protein LOC103485546 [Cucumis melo])

HSP 1 Score: 414.1 bits (1063), Expect = 7.5e-112
Identity = 205/215 (95.35%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDG--VAAAAAVEKRRASS 60
           MTTVQASHVVAM+VEQHQQ PRTDSD+VRRCSVHSRADILEE+G  VA AAA EKRR SS
Sbjct: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIE+DCRICHLSLDASNHESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 214
           EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of CSPI06G01430 vs. NCBI nr
Match: KAA0041505.1 (E3 ubiquitin-protein ligase MARCH8 [Cucumis melo var. makuwa] >TYK24378.1 E3 ubiquitin-protein ligase MARCH8 [Cucumis melo var. makuwa])

HSP 1 Score: 360.5 bits (924), Expect = 9.8e-96
Identity = 180/207 (86.96%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 1   MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDG--VAAAAAVEKRRASS 60
           MTTVQASHVVAM+VEQHQQ PRTDSD+VRRCSVHSRADILEE+G  VA AAA EKRR SS
Sbjct: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIE+DCRICHLSLDASNHESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISW 206
           EARNFWQGH      ++ +    ++S+
Sbjct: 181 EARNFWQGHSLAGLAISIVRAVCLLSF 207

[Close]

BLAST of CSPI06G01430 vs. NCBI nr
Match: XP_038884403.1 (uncharacterized protein LOC120075258 [Benincasa hispida])

HSP 1 Score: 359.0 bits (920), Expect = 2.8e-95
Identity = 189/227 (83.26%), Postives = 193/227 (85.02%), Query Frame = 0


Query: 1   MTTVQASHVVAMDVE----QHQQRPR------TD----SDDVRRCSVHSRADILEEDGVA 60
           MTT+Q SHV  MDVE    Q QQRPR      TD    SDDVRRCSV SRADI+EE    
Sbjct: 1   MTTIQNSHVGTMDVEQQQQQQQQRPRRVSAAATDSSPASDDVRRCSVQSRADIMEE---- 60

Query: 61  AAAAVEKRRASSVSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIEL 120
              A EKRR SSVSECSVEMDLECGLAEIKVHLAKIE+D RICHLSLDASNHESGIPIEL
Sbjct: 61  --VAAEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDFRICHLSLDASNHESGIPIEL 120

Query: 121 GCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTAT 180
           GCSCKDDLAAAHK CAEAWFKIKGDITCEICGSIAHNVTGTYE DSTEQRNE NEATTAT
Sbjct: 121 GCSCKDDLAAAHKQCAEAWFKIKGDITCEICGSIAHNVTGTYEPDSTEQRNESNEATTAT 180

Query: 181 ATAAIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 214
            TAA+VMP HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 TTAAVVMPLHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 221

[Close]

BLAST of CSPI06G01430 vs. NCBI nr
Match: KAG6602635.1 (hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 346.7 bits (888), Expect = 1.5e-91
Identity = 174/222 (78.38%), Postives = 190/222 (85.59%), Query Frame = 0


Query: 1   MTTVQASHVVAMDVEQHQQRPRTD---------SDDVRRCSVHSRADILEEDGVAAAAAV 60
           M+T++ +HVVAM+ E+ ++  R           SDDVRRCSV S A+I     V AAAAV
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEI-----VGAAAAV 60

Query: 61  EKRRASSVSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCK 120
           EKRR SSVSECSVEMDLECGL EIKVHLAK+E+DCRICHLSLDA+NHESGIPIELGCSCK
Sbjct: 61  EKRRGSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCK 120

Query: 121 DDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAI 180
           DDLAAAHKHCAEAWFK+KGDITCEICGSIAHNVTGT EADSTEQ NE N+ TTAT  AA+
Sbjct: 121 DDLAAAHKHCAEAWFKVKGDITCEICGSIAHNVTGTCEADSTEQCNESNDGTTATTVAAV 180

Query: 181 VMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 214
           V+PPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217

[Close]

BLAST of CSPI06G01430 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 3.0e-58
Identity = 107/162 (66.05%), Postives = 124/162 (76.54%), Query Frame = 0


Query: 52  EKRRASSVSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCK 111
           ++ R S+ S CSVE+DLE GL E  VHL++ E+DCRICH+SLDA+N ESG+PIELGCSCK
Sbjct: 45  DEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCRICHMSLDAANLESGVPIELGCSCK 104

Query: 112 DDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAI 171
            DLAAAHKHCAE WFKIKG+  CE+CGSIA NV G+ E +S E RNE N     T   + 
Sbjct: 105 ADLAAAHKHCAETWFKIKGNKICEVCGSIAGNVVGSVEVESEESRNEANGVENLTLRTS- 164

Query: 172 VMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 214
              P   E R+FWQGHRFLNFLLACMVFAFVISWLFHF +PS
Sbjct: 165 --GPRLVEGRSFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 203

[Close]

BLAST of CSPI06G01430 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-33
Identity = 69/133 (51.88%), Postives = 85/133 (63.91%), Query Frame = 0


Query: 83  EKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAH 142
           EKDCRICHL L++S HE G P+ LGCSCKDDL   HK CA+ WFKIKG+ TCEIC SIA 
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQ 134

Query: 143 NVTGTYEADST--EQRNEPNEATTATATAAIVMPPHSTEARNFWQGHRFLNFLLACMVFA 202
           N    ++ D+   +   E N           ++    ++ R   +G+RFLNFLL CMV A
Sbjct: 135 NF---FKVDNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLTCMVCA 194

Query: 203 FVISWLFHFKIPS 214
           FVISW FHF +PS
Sbjct: 195 FVISWFFHFNLPS 204

[Close]

BLAST of CSPI06G01430 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 8.1e-32
Identity = 80/165 (48.48%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 52  EKRRASSV-SECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSC 111
           + R+ SSV S  S E+D +          A  EKDCRICHL ++ S    G  IELGCSC
Sbjct: 56  QSRKVSSVMSPSSSEIDDDDA-------TAPPEKDCRICHLGVETS---GGGAIELGCSC 115

Query: 112 KDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYE--ADSTEQRNEPNEATTATAT 171
           KDDLA AH+ CAE WFKIKGD TCEIC S+A NV G  E    + E+R   N   TA   
Sbjct: 116 KDDLAVAHRQCAETWFKIKGDKTCEICQSVARNVGGANEMVGSTMEERELRNGEETAAGE 175

Query: 172 AAIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 214
                   +T   N WQ  R +N +LACMVF F ISW+FHF + S
Sbjct: 176 GG-----GATVVENRWQPQRVVNLVLACMVFGFFISWIFHFHVSS 205

[Close]

BLAST of CSPI06G01430 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-29
Identity = 69/159 (43.40%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 84  KDCRICHLSLDASNHES-------------------------------GIPIELGCSCKD 143
           +DCRICHL L+ +                                   G+P++LGCSCK 
Sbjct: 79  RDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKG 138

Query: 144 DLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIV 203
           DL  AH  CAE WFKIKG++TCEICG++A NV G       EQ N  + A+T +  AA  
Sbjct: 139 DLGVAHSKCAETWFKIKGNMTCEICGAMALNVAG-------EQSNPESTASTHSQAAA-G 198

Query: 204 MPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKI 212
                TE R  W G   +NFLLA MVFAFV+SWLFHFK+
Sbjct: 199 QSLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of CSPI06G01430 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-16
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 83  EKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGD 132
           EKDCRICHL L++S HE G P+ LGCSCKDDL   HK CA+ WFKIKG+
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGN 123

The following BLAST results are available for this feature:

BLAST of CSPI06G01430 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G01430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8G0	2.0e-115	98.60	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G00942...	[more]
A0A1S3B429	3.6e-112	95.35	uncharacterized protein LOC103485546 OS=Cucumis melo OX=3656 GN=LOC103485546 PE=...	[more]
A0A5A7TJA4	4.7e-96	86.96	E3 ubiquitin-protein ligase MARCH8 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1FEB0	1.0e-90	78.38	uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC1114447...	[more]
A0A6J1GZN3	1.7e-90	77.03	uncharacterized protein LOC111458938 OS=Cucurbita moschata OX=3662 GN=LOC1114589...	[more]

BLAST of CSPI06G01430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138437.1	4.2e-115	98.60	uncharacterized protein LOC101207404 [Cucumis sativus] >KGN45763.1 hypothetical ...	[more]
XP_008441426.1	7.5e-112	95.35	PREDICTED: uncharacterized protein LOC103485546 [Cucumis melo]	[more]
KAA0041505.1	9.8e-96	86.96	E3 ubiquitin-protein ligase MARCH8 [Cucumis melo var. makuwa] >TYK24378.1 E3 ubi...	[more]
XP_038884403.1	2.8e-95	83.26	uncharacterized protein LOC120075258 [Benincasa hispida]	[more]
KAG6602635.1	1.5e-91	78.38	hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI06G01430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	3.0e-58	66.05	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	1.1e-33	51.88	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	8.1e-32	48.48	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	2.2e-29	43.40	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.1	1.6e-16	69.39	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 85..138 e-value: 5.6E-17 score: 72.4
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 86..137 e-value: 8.1E-9 score: 35.5
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 78..144 score: 16.911161
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 74..147 e-value: 1.7E-13 score: 51.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 3..213
None	No IPR available	PANTHER	PTHR46214:SF30	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 3..213
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 86..138 e-value: 2.38599E-10 score: 52.3296
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 83..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G01430.1	CSPI06G01430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding