CSPI06G01340 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G01340
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	AAI domain-containing protein
Location	Chr6: 958818 .. 959666 (-)
RNA-Seq Expression	CSPI06G01340
Synteny	CSPI06G01340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCCAATTACTTGTTGTGGTAGTATAAAATCGTGGTTTAGGAAGCCATAATAATTCATCATAAATTAGATAAAAAAAAGAAACAAGGATCGATCAAGATAAGAATTGAGATGGATTATTCAAGATCATCAAAATACAACTGGGTCATGGTATTTTTGGTTGCAGTAATGTTGATAGGTGGTACAGAATGTGGTCATGTTCACTCAAAAGGTGAATGTGCACCATCAACACCTGATAGAGAAGCATTTAAAATGATGCCATGTATGGGAGCTTCAAAGGATGTTGATTATCCAGTTTCTCAAAGATGTTGTGATCAAGTCAAGAAATTAGGGCAAAGTACAAGCTGTCTTTGTGCTGTTATGTTGTCTAAAACAGCTGAATTGGTGGGATCAAAGCCTGACATTGCGATCACTATTCCTAAGCGTTGTAACATTGTTGATCGCCCTGTTGGTTACAACTGTGGAGGTTTGTATTTCTAATAGTTCTCTCTATATATACCATTTTATATGTTCCTTCTTGGTGTATATGTAAGATTGCATTTTGATTGAGCCTTGTAATTTTGGATTTTGGTGCAGGTTACGTATTACCTTGATGAAAGAAGGAAAGGGAAGGAGTTAAAGGTGCATTCATCTCTGAGCACCATTATGTTGGAAGTCTAAAAGGGTGGGAAAATTTGGTGTTTCTTGTAAATCTATAGTGACATTCAGTCACTTAATTAAGTAATGAATAAAAATATGGTGTTTGTTGTTCATAAAAACACAAAATAGGCTTGCTTTCCCTTTTAATATCAAATTAAAATAATATAATTTAAGACATTAAAATAAGAACAACAACAACATCAAAAGTTCC

mRNA sequence

ATCCCAATTACTTGTTGTGGTAGTATAAAATCGTGGTTTAGGAAGCCATAATAATTCATCATAAATTAGATAAAAAAAAGAAACAAGGATCGATCAAGATAAGAATTGAGATGGATTATTCAAGATCATCAAAATACAACTGGGTCATGGTATTTTTGGTTGCAGTAATGTTGATAGGTGGTACAGAATGTGGTCATGTTCACTCAAAAGGTGAATGTGCACCATCAACACCTGATAGAGAAGCATTTAAAATGATGCCATGTATGGGAGCTTCAAAGGATGTTGATTATCCAGTTTCTCAAAGATGTTGTGATCAAGTCAAGAAATTAGGGCAAAGTACAAGCTGTCTTTGTGCTGTTATGTTGTCTAAAACAGCTGAATTGGTGGGATCAAAGCCTGACATTGCGATCACTATTCCTAAGCGTTGTAACATTGTTGATCGCCCTGTTGGTTACAACTGTGGAGGTTACGTATTACCTTGATGAAAGAAGGAAAGGGAAGGAGTTAAAGGTGCATTCATCTCTGAGCACCATTATGTTGGAAGTCTAAAAGGGTGGGAAAATTTGGTGTTTCTTGTAAATCTATAGTGACATTCAGTCACTTAATTAAGTAATGAATAAAAATATGGTGTTTGTTGTTCATAAAAACACAAAATAGGCTTGCTTTCCCTTTTAATATCAAATTAAAATAATATAATTTAAGACATTAAAATAAGAACAACAACAACATCAAAAGTTCC

Coding sequence (CDS)

ATGGATTATTCAAGATCATCAAAATACAACTGGGTCATGGTATTTTTGGTTGCAGTAATGTTGATAGGTGGTACAGAATGTGGTCATGTTCACTCAAAAGGTGAATGTGCACCATCAACACCTGATAGAGAAGCATTTAAAATGATGCCATGTATGGGAGCTTCAAAGGATGTTGATTATCCAGTTTCTCAAAGATGTTGTGATCAAGTCAAGAAATTAGGGCAAAGTACAAGCTGTCTTTGTGCTGTTATGTTGTCTAAAACAGCTGAATTGGTGGGATCAAAGCCTGACATTGCGATCACTATTCCTAAGCGTTGTAACATTGTTGATCGCCCTGTTGGTTACAACTGTGGAGGTTACGTATTACCTTGA

Protein sequence

MDYSRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDYPVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGYVLP*

Homology

[Close]

BLAST of CSPI06G01340 vs. ExPASy TrEMBL
Match: A0A0A0K8F0 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008840 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.3e-66
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MDYSRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDY 60
           MD SRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDY
Sbjct: 1   MDCSRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDY 60

Query: 61  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGY 120
           PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGY
Sbjct: 61  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGY 120

Query: 121 VLP 124
           VLP
Sbjct: 121 VLP 123

[Close]

BLAST of CSPI06G01340 vs. ExPASy TrEMBL
Match: A0A1S3B414 (uncharacterized protein LOC103485536 OS=Cucumis melo OX=3656 GN=LOC103485536 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 4.7e-64
Identity = 117/123 (95.12%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MDYSRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDY 60
           MDYSRSSKYNWVMVFLVAVML+ GTECGHV SKGECAPSTPDREAFKMMPCMGASKD DY
Sbjct: 3   MDYSRSSKYNWVMVFLVAVMLMVGTECGHVQSKGECAPSTPDREAFKMMPCMGASKDADY 62

Query: 61  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGY 120
           PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKP+IAITIPKRCNIVDRPVGYNCGGY
Sbjct: 63  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPEIAITIPKRCNIVDRPVGYNCGGY 122

Query: 121 VLP 124
           +LP
Sbjct: 123 ILP 125

[Close]

BLAST of CSPI06G01340 vs. ExPASy TrEMBL
Match: A0A5A7TJ62 (LTP_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001170 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.7e-61
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MDYSRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDY 60
           MDYSRSSKYNWVMVFLVAVML+ GTECGHV SKGECAPSTPDREAFKMMPCMGASKD DY
Sbjct: 3   MDYSRSSKYNWVMVFLVAVMLMVGTECGHVQSKGECAPSTPDREAFKMMPCMGASKDADY 62

Query: 61  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGG 120
           PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKP+IAITIPKRCNIVDRPVGYNCGG
Sbjct: 63  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPEIAITIPKRCNIVDRPVGYNCGG 121

[Close]

BLAST of CSPI06G01340 vs. ExPASy TrEMBL
Match: A0A6J1BYT2 (uncharacterized protein LOC111006702 OS=Momordica charantia OX=3673 GN=LOC111006702 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.3e-41
Identity = 77/112 (68.75%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 12  VMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDYPVSQRCCDQVK 71
           +   L   +L     CG+V    ECAPS+P+REA+KM+PCM ASKD  YPVSQ+CCDQV+
Sbjct: 8   ICFLLFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVR 67

Query: 72  KLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGYVLP 124
           KLGQSTSCLCAVMLSKTA++VGSKP++AITIPKRC+I +RPVGYNCGGY+LP
Sbjct: 68  KLGQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGGYILP 119

[Close]

BLAST of CSPI06G01340 vs. ExPASy TrEMBL
Match: A0A6J1HD74 (uncharacterized protein LOC111463057 OS=Cucurbita moschata OX=3662 GN=LOC111463057 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 80/116 (68.97%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 8   KYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDYPVSQRCC 67
           KY  +++FL A+ L+      +   +GECAPS P+REAFKMMPC+ ASKD  YPVS RCC
Sbjct: 6   KYTSLLLFL-ALFLVTARSDYYGQQRGECAPSNPEREAFKMMPCLSASKDPYYPVSHRCC 65

Query: 68  DQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGYVLP 124
           DQV+KLGQSTSCLCAVMLS TA +VG+KP+IAITIPKRCNI +RPVGYNCGGY LP
Sbjct: 66  DQVRKLGQSTSCLCAVMLSNTAAMVGAKPEIAITIPKRCNIAERPVGYNCGGYELP 120

[Close]

BLAST of CSPI06G01340 vs. NCBI nr
Match: XP_004138444.1 (uncharacterized protein LOC101209106 [Cucumis sativus] >KGN45753.1 hypothetical protein Csa_005699 [Cucumis sativus])

HSP 1 Score: 261.2 bits (666), Expect = 4.7e-66
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MDYSRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDY 60
           MD SRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDY
Sbjct: 1   MDCSRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDY 60

Query: 61  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGY 120
           PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGY
Sbjct: 61  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGY 120

Query: 121 VLP 124
           VLP
Sbjct: 121 VLP 123

[Close]

BLAST of CSPI06G01340 vs. NCBI nr
Match: XP_008441410.1 (PREDICTED: uncharacterized protein LOC103485536 [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 9.8e-64
Identity = 117/123 (95.12%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MDYSRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDY 60
           MDYSRSSKYNWVMVFLVAVML+ GTECGHV SKGECAPSTPDREAFKMMPCMGASKD DY
Sbjct: 3   MDYSRSSKYNWVMVFLVAVMLMVGTECGHVQSKGECAPSTPDREAFKMMPCMGASKDADY 62

Query: 61  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGY 120
           PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKP+IAITIPKRCNIVDRPVGYNCGGY
Sbjct: 63  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPEIAITIPKRCNIVDRPVGYNCGGY 122

Query: 121 VLP 124
           +LP
Sbjct: 123 ILP 125

[Close]

BLAST of CSPI06G01340 vs. NCBI nr
Match: KAA0041465.1 (LTP_2 domain-containing protein [Cucumis melo var. makuwa] >TYK24340.1 LTP_2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.0 bits (624), Expect = 3.5e-61
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MDYSRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDY 60
           MDYSRSSKYNWVMVFLVAVML+ GTECGHV SKGECAPSTPDREAFKMMPCMGASKD DY
Sbjct: 3   MDYSRSSKYNWVMVFLVAVMLMVGTECGHVQSKGECAPSTPDREAFKMMPCMGASKDADY 62

Query: 61  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGG 120
           PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKP+IAITIPKRCNIVDRPVGYNCGG
Sbjct: 63  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPEIAITIPKRCNIVDRPVGYNCGG 121

[Close]

BLAST of CSPI06G01340 vs. NCBI nr
Match: XP_038886380.1 (uncharacterized protein LOC120076581 [Benincasa hispida])

HSP 1 Score: 210.3 bits (534), Expect = 9.5e-51
Identity = 98/123 (79.67%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MDYSRSSKYNWVMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDY 60
           M+ SR SKY+WV++F+   M I GT+ GHV S+GECAPS P+REAFKMMPCMGASKD +Y
Sbjct: 1   MECSR-SKYSWVVLFI--AMFIVGTKSGHVQSRGECAPSNPEREAFKMMPCMGASKDENY 60

Query: 61  PVSQRCCDQVKKLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGY 120
           PVSQRCCDQV+KLGQSTSCLCAVMLSKTAELVGSKP+IAITIPKRCNI++RPVGYNCGGY
Sbjct: 61  PVSQRCCDQVRKLGQSTSCLCAVMLSKTAELVGSKPEIAITIPKRCNILERPVGYNCGGY 120

Query: 121 VLP 124
           +LP
Sbjct: 121 ILP 120

[Close]

BLAST of CSPI06G01340 vs. NCBI nr
Match: XP_022134464.1 (uncharacterized protein LOC111006702 [Momordica charantia])

HSP 1 Score: 177.2 bits (448), Expect = 8.9e-41
Identity = 77/112 (68.75%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 12  VMVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDYPVSQRCCDQVK 71
           +   L   +L     CG+V    ECAPS+P+REA+KM+PCM ASKD  YPVSQ+CCDQV+
Sbjct: 8   ICFLLFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVR 67

Query: 72  KLGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGYVLP 124
           KLGQSTSCLCAVMLSKTA++VGSKP++AITIPKRC+I +RPVGYNCGGY+LP
Sbjct: 68  KLGQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGGYILP 119

[Close]

BLAST of CSPI06G01340 vs. TAIR 10
Match: AT5G05960.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 30  VHSKGECAPSTPDREAFKMMPCMGASKDVDYPVSQRCCDQVKKLGQSTSCLCAVMLSKTA 89
           V+  GEC  + PDREA K+ PC  A++D    VS  CC +VK++GQ+  CLCAVMLS TA
Sbjct: 23  VYGAGECGRNPPDREAIKLAPCAMAAQDTSAKVSAICCARVKQMGQNPKCLCAVMLSSTA 82

Query: 90  ELVGSKPDIAITIPKRCNIVDRPVGYNCGGYVLP 124
              G+KP+I++TIPKRCNI +RPVGY CG Y LP
Sbjct: 83  RSSGAKPEISMTIPKRCNIANRPVGYKCGAYTLP 116

[Close]

BLAST of CSPI06G01340 vs. TAIR 10
Match: AT3G53980.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-27
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 13  MVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDYPVSQRCCDQVKK 72
           +  L  ++LIG      V   GEC  S+PD EA K+ PC GA++D +  V   CC Q+K+
Sbjct: 8   LCILGLILLIGTV----VDGAGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQIKR 67

Query: 73  LGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGYVLP 124
             Q+  CLCA++LS TA+  G  P++A+TIPKRCN  +RPVGY CG Y LP
Sbjct: 68  FSQNPKCLCAILLSDTAKASGVDPEVALTIPKRCNFANRPVGYKCGAYTLP 114

[Close]

BLAST of CSPI06G01340 vs. TAIR 10
Match: AT3G53980.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-27
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 13  MVFLVAVMLIGGTECGHVHSKGECAPSTPDREAFKMMPCMGASKDVDYPVSQRCCDQVKK 72
           +  L  ++LIG      V   GEC  S+PD EA K+ PC GA++D +  V   CC Q+K+
Sbjct: 8   LCILGLILLIGTV----VDGAGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQIKR 67

Query: 73  LGQSTSCLCAVMLSKTAELVGSKPDIAITIPKRCNIVDRPVGYNCGGYVLP 124
             Q+  CLCA++LS TA+  G  P++A+TIPKRCN  +RPVGY CG Y LP
Sbjct: 68  FSQNPKCLCAILLSDTAKASGVDPEVALTIPKRCNFANRPVGYKCGAYTLP 114

[Close]

BLAST of CSPI06G01340 vs. TAIR 10
Match: AT2G37870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 6.2e-16
Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 30  VHSKGECAPSTPDREAFKMMPCMGASKDVDYPVSQRCCDQVKKLGQST-SCLCAVMLSKT 89
           V + GEC     ++ A  + PC+ A+K+    V   CC +V  L ++   CLCAVMLS  
Sbjct: 21  VEAAGECGRMPINQAAASLSPCLPATKNPRGKVPPVCCAKVGALIRTNPRCLCAVMLSPL 80

Query: 90  AELVGSKPDIAITIPKRCNIVDRPVGYNCGGYVLP 124
           A+  G  P IAI +PKRCNI +RP G  CG Y++P
Sbjct: 81  AKKAGINPGIAIGVPKRCNIRNRPAGKRCGRYIVP 115

The following BLAST results are available for this feature:

BLAST of CSPI06G01340 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G01340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8F0	2.3e-66	99.19	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008840 PE=4 SV...	[more]
A0A1S3B414	4.7e-64	95.12	uncharacterized protein LOC103485536 OS=Cucumis melo OX=3656 GN=LOC103485536 PE=...	[more]
A0A5A7TJ62	1.7e-61	95.80	LTP_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1BYT2	4.3e-41	68.75	uncharacterized protein LOC111006702 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1HD74	1.1e-39	68.97	uncharacterized protein LOC111463057 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]

BLAST of CSPI06G01340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138444.1	4.7e-66	99.19	uncharacterized protein LOC101209106 [Cucumis sativus] >KGN45753.1 hypothetical ...	[more]
XP_008441410.1	9.8e-64	95.12	PREDICTED: uncharacterized protein LOC103485536 [Cucumis melo]	[more]
KAA0041465.1	3.5e-61	95.80	LTP_2 domain-containing protein [Cucumis melo var. makuwa] >TYK24340.1 LTP_2 dom...	[more]
XP_038886380.1	9.5e-51	79.67	uncharacterized protein LOC120076581 [Benincasa hispida]	[more]
XP_022134464.1	8.9e-41	68.75	uncharacterized protein LOC111006702 [Momordica charantia]	[more]

BLAST of CSPI06G01340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05960.1	1.1e-28	57.45	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G53980.1	2.7e-27	47.75	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G53980.2	2.7e-27	47.75	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G37870.1	6.2e-16	43.16	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 36..117 e-value: 3.0E-4 score: 30.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 36..116 e-value: 1.6E-10 score: 41.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 42..113 e-value: 2.0E-11 score: 45.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 45..111
None	No IPR available	PANTHER	PTHR33122:SF66	LIPID TRANSFER PROTEIN	coord: 8..123
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 48..108 e-value: 3.5064E-7 score: 42.4139
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	LIPID BINDING PROTEIN-RELATED	coord: 8..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G01340.1	CSPI06G01340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
cellular_component	GO:0016020	membrane
molecular_function	GO:0005504	fatty acid binding