CSPI06G00300 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGTCTTCATACTCGACGAAATCCACAGCTTCGTCGATGCCGTCTCCGCCCTCGCCGGCCTTGGCTACGTATTCAATCTCAAATTCTCACCAGAAATGTTCTCAATAATGGCCAACCCCACACCTTCCCCTTCTTGTACCATAGCCCTTCAACTATTTCCTCCATTCTTCAATCAACAATATTCCTGCCAACAACTTCACTACTCATGGATTTACATCAACCACTTTTTCCCCGAAATGTTCCATTTGGAACGAACCGGTTTTTCTTCGCTCACATTCTCTTTCGCAGATTCGCATCATGCCGACCTCACATTTTGCAGCCGTGATGGTTAG ATGTTCGTCTTCATACTCGACGAAATCCACAGCTTCGTCGATGCCGTCTCCGCCCTCGCCGGCCTTGGCTACGTATTCAATCTCAAATTCTCACCAGAAATGTTCTCAATAATGGCCAACCCCACACCTTCCCCTTCTTGTACCATAGCCCTTCAACTATTTCCTCCATTCTTCAATCAACAATATTCCTGCCAACAACTTCACTACTCATGGATTTACATCAACCACTTTTTCCCCGAAATGTTCCATTTGGAACGAACCGGTTTTTCTTCGCTCACATTCTCTTTCGCAGATTCGCATCATGCCGACCTCACATTTTGCAGCCGTGATGGTTAG ATGTTCGTCTTCATACTCGACGAAATCCACAGCTTCGTCGATGCCGTCTCCGCCCTCGCCGGCCTTGGCTACGTATTCAATCTCAAATTCTCACCAGAAATGTTCTCAATAATGGCCAACCCCACACCTTCCCCTTCTTGTACCATAGCCCTTCAACTATTTCCTCCATTCTTCAATCAACAATATTCCTGCCAACAACTTCACTACTCATGGATTTACATCAACCACTTTTTCCCCGAAATGTTCCATTTGGAACGAACCGGTTTTTCTTCGCTCACATTCTCTTTCGCAGATTCGCATCATGCCGACCTCACATTTTGCAGCCGTGATGGTTAG MFVFILDEIHSFVDAVSALAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINHFFPEMFHLERTGFSSLTFSFADSHHADLTFCSRDG* Homology
BLAST of CSPI06G00300 vs. ExPASy TrEMBL
Match: A0A0A0K833 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002320 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.0e-57 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CSPI06G00300 vs. ExPASy TrEMBL
Match: A0A5D3BU35 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00910 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.4e-53 Identity = 105/111 (94.59%), Postives = 107/111 (96.40%), Query Frame = 0
BLAST of CSPI06G00300 vs. ExPASy TrEMBL
Match: A0A6J1KWL1 (uncharacterized protein LOC111498888 OS=Cucurbita maxima OX=3661 GN=LOC111498888 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.9e-16 Identity = 53/96 (55.21%), Postives = 62/96 (64.58%), Query Frame = 0
BLAST of CSPI06G00300 vs. ExPASy TrEMBL
Match: A0A6J1H4N0 (uncharacterized protein LOC111460009 OS=Cucurbita moschata OX=3662 GN=LOC111460009 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 7.4e-16 Identity = 52/96 (54.17%), Postives = 61/96 (63.54%), Query Frame = 0
BLAST of CSPI06G00300 vs. ExPASy TrEMBL
Match: A0A6J1L2R2 (uncharacterized protein LOC111499308 OS=Cucurbita maxima OX=3661 GN=LOC111499308 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.9e-12 Identity = 43/111 (38.74%), Postives = 70/111 (63.06%), Query Frame = 0
BLAST of CSPI06G00300 vs. NCBI nr
Match: KGN45638.2 (hypothetical protein Csa_005465, partial [Cucumis sativus]) HSP 1 Score: 229.9 bits (585), Expect = 1.0e-56 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CSPI06G00300 vs. NCBI nr
Match: TYK02997.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 216.9 bits (551), Expect = 9.2e-53 Identity = 105/111 (94.59%), Postives = 107/111 (96.40%), Query Frame = 0
BLAST of CSPI06G00300 vs. NCBI nr
Match: WP_217833378.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 134.0 bits (336), Expect = 7.8e-28 Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0
BLAST of CSPI06G00300 vs. NCBI nr
Match: KAG6575236.1 (hypothetical protein SDJN03_25875, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 98.2 bits (243), Expect = 4.7e-17 Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of CSPI06G00300 vs. NCBI nr
Match: XP_023548336.1 (uncharacterized protein LOC111807004 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 95.5 bits (236), Expect = 3.1e-16 Identity = 53/96 (55.21%), Postives = 62/96 (64.58%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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