CSPI05G30890 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAAAGAAAATAATAATAATAATAATAAGAGAAGAAGAAGAAAAAAATGTTGTAGAAAAATTGAGTTTCTTCCTCTTCGTTATCACTGCTCTGCTCTTATCTGAGTGAGCTCCATTGATGAGGTGATCAGCTTTCACACAATTTCTTCTCCTCCCTTTTTTTTTTGTTTTGTTTTGTTTATAATGCGAGTCCTTCTGACCTTAAGGCCGGCATCTTCAAACCCACCCCCATGTCTTTCTTCTCCCAATTTCTCTCCTCCTCTTGCCTCTTCTTTCCTCTTCAGTTTCAGACCCAACAAGCGCTTTCACTTCCTCAAGCCTTGTTCCTCTCTCAAGCAATCCAAGAAACCTACTCTTCAGAAGACACCCACTAGCGCCCCTCAAAGCTTTAAGTGGCTTTTTAGCGCCAAGTCCGACGATGACGATGCCGGTGAGAAAGGGAATAAAGGTGTGGATGGAGATGGAGCTGTTTTGGAAGATGACTCTGCGGTTAAGGGCACCCTTTTGGCTGGTGTGTTGCTTGTTGGGGTTATTGGTGGATTTGCATTTGCTGGATATGTGTATAGGGATCCGATTAACGCCTTCTTGAATCAGTTCTCGACCTTTATTGATGGTAATTTTATTATGGTTTATTTGCTTCTTTGTGTGTGTGTGTGTGTGTGTATTTTGAACTGGGTAATGAATTTCTTGGTGTAATGATCAATTTCATTGTGGTTCGATGAGCATTTTGCTGGGGGTGTGTTGTTCATCGCGTTTTGAAATTGGTCTGGATTATGCGTTGGTTATTGTAATGTGAGGCTGTTCTGAAATTCCTCGTGCTGATTCTGATTGTGTGTGTGTGTGGCAATCATATATTGCTCCTCCATCTTCTTCTTCTATGTCTCGTGAAATTTTGATGCAAATTAACCTCAATTTTTGCGAAAATTTGAGTTTTTTAGATTCCCCTTTTAAAAAATTTAACTCTAAAATGCCTGGAGTTAATTTGACATTCCTACTGCTATGCAAAAAAGGGGGAAAACAGCTGAACGTCTTGAATTTCCATAGTTAATAGAGTACTTATATTCTACTTTTCTCTTGTACTTTCATATTTATTCTTTTTTGGTATTAGCTTTCAGACCTTCTGTTTTAGTCCTAGGGGGTAGCGCTCCATTGTAGGTTTAAATTGTTGACCTTGTTAGTTAGACTCTCGGTTGCTTTGGTTGGGTATGAAGTGACTCAATTCCCCTCCACTTATTTAGAGCTCCCGTTTGGAGGGAATTCAAGAACTCAGTTGTTTTGGAATCCTGCTCTGGAAAGTTTTAGAAAAGGTTGTCTTCTTTGAAAAAGACTTACTTTTTCTAAAGGAGGGAGACTCTCTTGTTCAGGTTTTGACGGGGTTCCTAGTTATTTTTTCCTTATTTAGGATTTGGTCTCAGTCTGTAAGAATCTGAGAGATCGATCATTGATGAGAAACTTTTAGTGGCAAGGGGTTGATGAGGGAGAACTTAATGGTTGTGGTGGTCCTTCACTGAAGTCTGAGACTGACGCACTGCGGTGTAGAATTTTTGCAAGTAGTATTTAATGTCATAGGCCATATCCTCCTAAACATCTTGGATAACTACTTATTACTTTGACCACTGAGTTGTCTCATAGTTAAACGTGGCTCTGTTTAAACATAATGGATTAACTGATCAGTAATATGTTATCACCTCTCTACATTTGCAGCTATCTACTTTCTAATTCTAGTTCCCAAATTCTAATAATGGTGTCATTCACTTTAAAGTGCGTGTGGTACTATAGTTGTATTCCTTTGTTTTTAAGCATAAAATCATTACCAGAGAAAAAGGGATATTTTGAATAATTGAGGAGCTGCCATTTCTCTGAAGGATCTCTCTCAATGATGTAATTTTTAACGTAGAGGTTTTGATTAACAGGATATGGTCCAGCAGGATATGCTTTATTTGTAGCAGTATATGCAGGACTGGAGGTACAAATCTGTTTTATTTAATACAAATATTTTGGAAATTTACCTTCTACATTTATAGTGGTGCCCTTTGTTGTAAGGCATGGCATATTTGGGGTCGCTGTAGGGGTGACCCAGTTGGAGAACTTAATAGATTAAAACCTTTGTAGCTTTTTGTCTACTTCGACCCTTTGGGATCAAATGGTGATGGGGCTATGAACATAATGTAAGAATTGGACTTGAAGTAGACCAAAAGTACTATTAGATTTATAACATATATGCTGAAAGCCTGAAACTATGTTTTCCTGTACTAGTTCTACTTGTAGTTGTTGTACCACTTTTTGGTTGCCCATGTGGAGGTGCAAGAGATACTTCCTCCATGGTTTAGTTTTTTACTTTTGCCAACTATCGATTATGAAGTTTATGTTATGATTTCTTTCCTTCTAGATCCTTGCAATTCCCGCCATTCCATTAACAATGTCAGCTGGACTCCTCTTTGGTTCTGTAATTGGGACTGTTATAGTTTCCATCAGTGGAACGGTGAGTGTTCTGTACCAATATGCAAATAGATAGATTATCATGTGCCTCCTAGTTATTAACTTTGTATCTCTTATTAATTCAGGTTGCTGCTAGTGTTGCCTTTTTGATTGCTCGGTATTTTGCTCGTGAGCGTATTCTTAAGCTAGTAGAAGGAAACAAGAAATTTGCTGCCATTGACAAAGCCATTGGAGAAAATGGTTTCAAAGTTGTTACCCTCCTACGTTTGAGCCCATTGCTTCCATTTTCTCTAGGAAATTATTTATATGGACTCACATCTGTCAAATTTGTCCCCTATGTGTTGGGAAGGTCAGTTTTCAATTCCTCAATGAATTTCAAAATTGTACCTCTTGCCCTGTTTCATTTCTATAGTGATATCTATATTCATAAATGATTGTAGCTTTCTTTTTCTTCAATAAACTATTTTGATTCTCCTTAGTTTTATTGATACATACAGAATGCTATGAGCTGTATGAACTTCAAAACATAAACAGATTTATTTTCTTTAATGCAGCTGGCTGGGGATGCTTCCAGGAACATGGGCATATGTGAGTGCGGGTGCCTTTGGACGTGCAATTATTGTAAGTTTTCAACCCGTTGCCCCTCACTACTTAGAGATGTGATAATAACATCTTACCTCATAAATGTGTACTTGACTTGGTTCTTAAAGTGTTCGTGCTTGTGCTTTTTAGGACCGATTGCTTCTTTATTTAAAATTTCTATTAGTAAAAGGTGCATTTGACCAATTATCAGTGCTTTTTAAAGTCTTTCTAGAATGCACTTGGGGTGCATTTGGGATTGATTTTGTAGGAGTTTAAAGTGATTATGAGGAAATTTTAACTGTTTAGTGTTTGGTAAAACTGATTACAGGATAATTGAAAGGAAATCACTTTTTCAATTCAATTGGTTTCTAAAATCTATGTAGAGTAGTTTTTGAGATTGAGTTCCAAAAATATCATGCCTCTTCTAATTAACTACTAAAATTCATAGTTTATTCCTATTCTATAATACTTTTTCTCATTTAAGTTTGAAATTTACCAAAACACTTGTTTACTTCATTCTACAGCCGATATTTTAAAAAGTGCAGCTATTAGTAATTATTTCAAAAGCTACAATAACTAAGCCTTAAAGTGCTCTTTTGTGAAAGCATTTACACTTTTATTAAGAGGTAAGACAAACACATCAATGTGTTTGCTTGAACTATGATCTGGATTCTTAGTTGGGTTTTCTGTCTCTATTGTTTTGTTTCTAAGTTTTCGAGTTTCAATTTTATGGTCTGGTTTCTTTTCCACTCTTAATTTTACTTGGGGTGTTTCAGCAAGAAGAGTCTGAAGTTAGTTTGCTTGGAGGGGGAAATGGTCAGCTATGGACTTTAGGACTGGGATTGCTGGCAACAGCATTGGCTGCTGCATACGTTACACGATTAGCCAAGGTAATATATCTTATTATTGCTATGCTATACTACAGACGTAATGCAATCAAATCTTCATTTTGGAACCACGATCTAGCCAATATGGAATTAACTCATAATCATGAAATTTACTCTATCATCATCATATTACAGTTTATAGGTCCATAGCCCCAGCTTATTCACATCTCTATCTCGCCATTCTTTTACGAGGGAATGTGGTTAGAGAGTTATGTCGTGGACTTAAAAAGGGATATGAGTATTTGAGAATGTTGGGTCTAAATGTTAGGATCAAATAATATTTACATGATATTAGTGAAAAAATACACACAAATTGGATACATTAAAGATTCCATAGTTGATTGATATTGAAATTTGTTGGTTTAAACAATCATTCTTTAATTTCAGTAATTGAATGGGAGGTGGTACGGACATCAAGGATATTTTGCATAAGATCAGACCGTCATTCTATAATGATTGGTCAGGTTATATATGCAAACAAAGGTGTCCAAAATCAAAAGAGTTACTCTATAAGATTAGTCGGCATACATGCATACAAAGATGTACACAATCAAAGTGTGATTTGATTAGTTGGGATATTATATGCAAACATAGTTATGGGTGGGGTTCTTTGGTTAGATTAATGTGAAAGGGTTGTGAATGTTGTTTTAATTTATTTTTGAAAATTGCAGGATGCTATGAAGGATATTGAATAGGCATGGCACCTCGGTGAATGTAGTAGGAGGTATAAAATTAAATTCATAATTGAATTTTGAAAATTGGCAAATGCTCTGTATATTTTTTGTTTGACCAATTCAGAGAAACTTCAACCAGTTGCTGATAATGTATAATGTTTACATTAATAATCAATATAATCAATCTCTAATTGTAACTTAAACCTCTCTCTCTATCTATCTATAACATAAAAGTATATGATATGAGTTTTTGG AAAGAAAGAAAATAATAATAATAATAATAAGAGAAGAAGAAGAAAAAAATGTTGTAGAAAAATTGAGTTTCTTCCTCTTCGTTATCACTGCTCTGCTCTTATCTGAGTGAGCTCCATTGATGAGGTGATCAGCTTTCACACAATTTCTTCTCCTCCCTTTTTTTTTTGTTTTGTTTTGTTTATAATGCGAGTCCTTCTGACCTTAAGGCCGGCATCTTCAAACCCACCCCCATGTCTTTCTTCTCCCAATTTCTCTCCTCCTCTTGCCTCTTCTTTCCTCTTCAGTTTCAGACCCAACAAGCGCTTTCACTTCCTCAAGCCTTGTTCCTCTCTCAAGCAATCCAAGAAACCTACTCTTCAGAAGACACCCACTAGCGCCCCTCAAAGCTTTAAGTGGCTTTTTAGCGCCAAGTCCGACGATGACGATGCCGGTGAGAAAGGGAATAAAGGTGTGGATGGAGATGGAGCTGTTTTGGAAGATGACTCTGCGGTTAAGGGCACCCTTTTGGCTGGTGTGTTGCTTGTTGGGGTTATTGGTGGATTTGCATTTGCTGGATATGTGTATAGGGATCCGATTAACGCCTTCTTGAATCAGTTCTCGACCTTTATTGATGGATATGGTCCAGCAGGATATGCTTTATTTGTAGCAGTATATGCAGGACTGGAGATCCTTGCAATTCCCGCCATTCCATTAACAATGTCAGCTGGACTCCTCTTTGGTTCTGTAATTGGGACTGTTATAGTTTCCATCAGTGGAACGGTTGCTGCTAGTGTTGCCTTTTTGATTGCTCGGTATTTTGCTCGTGAGCGTATTCTTAAGCTAGTAGAAGGAAACAAGAAATTTGCTGCCATTGACAAAGCCATTGGAGAAAATGGTTTCAAAGTTGTTACCCTCCTACGTTTGAGCCCATTGCTTCCATTTTCTCTAGGAAATTATTTATATGGACTCACATCTGTCAAATTTGTCCCCTATGTGTTGGGAAGCTGGCTGGGGATGCTTCCAGGAACATGGGCATATGTGAGTGCGGGTGCCTTTGGACGTGCAATTATTCAAGAAGAGTCTGAAGTTAGTTTGCTTGGAGGGGGAAATGGTCAGCTATGGACTTTAGGACTGGGATTGCTGGCAACAGCATTGGCTGCTGCATACGTTACACGATTAGCCAAGGATGCTATGAAGGATATTGAATAGGCATGGCACCTCGGTGAATGTAGTAGGAGGTATAAAATTAAATTCATAATTGAATTTTGAAAATTGGCAAATGCTCTGTATATTTTTTGTTTGACCAATTCAGAGAAACTTCAACCAGTTGCTGATAATGTATAATGTTTACATTAATAATCAATATAATCAATCTCTAATTGTAACTTAAACCTCTCTCTCTATCTATCTATAACATAAAAGTATATGATATGAGTTTTTGG ATGCGAGTCCTTCTGACCTTAAGGCCGGCATCTTCAAACCCACCCCCATGTCTTTCTTCTCCCAATTTCTCTCCTCCTCTTGCCTCTTCTTTCCTCTTCAGTTTCAGACCCAACAAGCGCTTTCACTTCCTCAAGCCTTGTTCCTCTCTCAAGCAATCCAAGAAACCTACTCTTCAGAAGACACCCACTAGCGCCCCTCAAAGCTTTAAGTGGCTTTTTAGCGCCAAGTCCGACGATGACGATGCCGGTGAGAAAGGGAATAAAGGTGTGGATGGAGATGGAGCTGTTTTGGAAGATGACTCTGCGGTTAAGGGCACCCTTTTGGCTGGTGTGTTGCTTGTTGGGGTTATTGGTGGATTTGCATTTGCTGGATATGTGTATAGGGATCCGATTAACGCCTTCTTGAATCAGTTCTCGACCTTTATTGATGGATATGGTCCAGCAGGATATGCTTTATTTGTAGCAGTATATGCAGGACTGGAGATCCTTGCAATTCCCGCCATTCCATTAACAATGTCAGCTGGACTCCTCTTTGGTTCTGTAATTGGGACTGTTATAGTTTCCATCAGTGGAACGGTTGCTGCTAGTGTTGCCTTTTTGATTGCTCGGTATTTTGCTCGTGAGCGTATTCTTAAGCTAGTAGAAGGAAACAAGAAATTTGCTGCCATTGACAAAGCCATTGGAGAAAATGGTTTCAAAGTTGTTACCCTCCTACGTTTGAGCCCATTGCTTCCATTTTCTCTAGGAAATTATTTATATGGACTCACATCTGTCAAATTTGTCCCCTATGTGTTGGGAAGCTGGCTGGGGATGCTTCCAGGAACATGGGCATATGTGAGTGCGGGTGCCTTTGGACGTGCAATTATTCAAGAAGAGTCTGAAGTTAGTTTGCTTGGAGGGGGAAATGGTCAGCTATGGACTTTAGGACTGGGATTGCTGGCAACAGCATTGGCTGCTGCATACGTTACACGATTAGCCAAGGATGCTATGAAGGATATTGAATAG MRVLLTLRPASSNPPPCLSSPNFSPPLASSFLFSFRPNKRFHFLKPCSSLKQSKKPTLQKTPTSAPQSFKWLFSAKSDDDDAGEKGNKGVDGDGAVLEDDSAVKGTLLAGVLLVGVIGGFAFAGYVYRDPINAFLNQFSTFIDGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVIGTVIVSISGTVAASVAFLIARYFARERILKLVEGNKKFAAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESEVSLLGGGNGQLWTLGLGLLATALAAAYVTRLAKDAMKDIE* Homology
BLAST of CSPI05G30890 vs. ExPASy Swiss-Prot
Match: Q55909 (TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0305 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.3e-30 Identity = 78/198 (39.39%), Postives = 118/198 (59.60%), Query Frame = 0
BLAST of CSPI05G30890 vs. ExPASy Swiss-Prot
Match: P76219 (TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) OX=83333 GN=ydjX PE=3 SV=2) HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20 Identity = 56/144 (38.89%), Postives = 87/144 (60.42%), Query Frame = 0
BLAST of CSPI05G30890 vs. ExPASy Swiss-Prot
Match: P9WFS2 (TVP38/TMEM64 family membrane protein MT1538 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1538 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.8e-10 Identity = 42/130 (32.31%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of CSPI05G30890 vs. ExPASy Swiss-Prot
Match: P9WFS3 (TVP38/TMEM64 family membrane protein Rv1491c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv1491c PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.8e-10 Identity = 42/130 (32.31%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of CSPI05G30890 vs. ExPASy Swiss-Prot
Match: P67118 (TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB1528C PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.8e-10 Identity = 42/130 (32.31%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of CSPI05G30890 vs. ExPASy TrEMBL
Match: A0A0A0KST0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649300 PE=4 SV=1) HSP 1 Score: 635.6 bits (1638), Expect = 1.2e-178 Identity = 333/334 (99.70%), Postives = 333/334 (99.70%), Query Frame = 0
BLAST of CSPI05G30890 vs. ExPASy TrEMBL
Match: A0A5A7T8S8 (TVP38/TMEM64 family membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00810 PE=4 SV=1) HSP 1 Score: 621.3 bits (1601), Expect = 2.3e-174 Identity = 325/334 (97.31%), Postives = 329/334 (98.50%), Query Frame = 0
BLAST of CSPI05G30890 vs. ExPASy TrEMBL
Match: A0A1S3CB16 (TVP38/TMEM64 family membrane protein slr0305 OS=Cucumis melo OX=3656 GN=LOC103498671 PE=4 SV=1) HSP 1 Score: 621.3 bits (1601), Expect = 2.3e-174 Identity = 325/334 (97.31%), Postives = 329/334 (98.50%), Query Frame = 0
BLAST of CSPI05G30890 vs. ExPASy TrEMBL
Match: A0A6J1I7M0 (uncharacterized protein LOC111472021 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472021 PE=4 SV=1) HSP 1 Score: 588.6 bits (1516), Expect = 1.7e-164 Identity = 312/337 (92.58%), Postives = 324/337 (96.14%), Query Frame = 0
BLAST of CSPI05G30890 vs. ExPASy TrEMBL
Match: A0A6J1EBL2 (uncharacterized protein LOC111432699 OS=Cucurbita moschata OX=3662 GN=LOC111432699 PE=4 SV=1) HSP 1 Score: 585.1 bits (1507), Expect = 1.9e-163 Identity = 310/337 (91.99%), Postives = 323/337 (95.85%), Query Frame = 0
BLAST of CSPI05G30890 vs. NCBI nr
Match: XP_004141545.1 (uncharacterized protein LOC101204460 [Cucumis sativus] >KGN52660.1 hypothetical protein Csa_007947 [Cucumis sativus]) HSP 1 Score: 635.6 bits (1638), Expect = 2.5e-178 Identity = 333/334 (99.70%), Postives = 333/334 (99.70%), Query Frame = 0
BLAST of CSPI05G30890 vs. NCBI nr
Match: XP_008459587.1 (PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Cucumis melo] >KAA0039288.1 TVP38/TMEM64 family membrane protein [Cucumis melo var. makuwa] >TYK00473.1 TVP38/TMEM64 family membrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 621.3 bits (1601), Expect = 4.8e-174 Identity = 325/334 (97.31%), Postives = 329/334 (98.50%), Query Frame = 0
BLAST of CSPI05G30890 vs. NCBI nr
Match: XP_038890133.1 (TVP38/TMEM64 family membrane protein slr0305 [Benincasa hispida]) HSP 1 Score: 611.7 bits (1576), Expect = 3.8e-171 Identity = 321/334 (96.11%), Postives = 326/334 (97.60%), Query Frame = 0
BLAST of CSPI05G30890 vs. NCBI nr
Match: XP_023535509.1 (uncharacterized protein LOC111796928 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 590.1 bits (1520), Expect = 1.2e-164 Identity = 313/337 (92.88%), Postives = 325/337 (96.44%), Query Frame = 0
BLAST of CSPI05G30890 vs. NCBI nr
Match: XP_022973470.1 (uncharacterized protein LOC111472021 isoform X2 [Cucurbita maxima] >XP_022973472.1 uncharacterized protein LOC111472021 isoform X2 [Cucurbita maxima]) HSP 1 Score: 588.6 bits (1516), Expect = 3.5e-164 Identity = 312/337 (92.58%), Postives = 324/337 (96.14%), Query Frame = 0
BLAST of CSPI05G30890 vs. TAIR 10
Match: AT1G22850.1 (SNARE associated Golgi protein family ) HSP 1 Score: 441.4 bits (1134), Expect = 6.4e-124 Identity = 246/333 (73.87%), Postives = 274/333 (82.28%), Query Frame = 0
BLAST of CSPI05G30890 vs. TAIR 10
Match: AT5G19070.1 (SNARE associated Golgi protein family ) HSP 1 Score: 108.2 bits (269), Expect = 1.3e-23 Identity = 76/229 (33.19%), Postives = 120/229 (52.40%), Query Frame = 0
BLAST of CSPI05G30890 vs. TAIR 10
Match: AT1G03260.1 (SNARE associated Golgi protein family ) HSP 1 Score: 104.8 bits (260), Expect = 1.4e-22 Identity = 64/173 (36.99%), Postives = 96/173 (55.49%), Query Frame = 0
BLAST of CSPI05G30890 vs. TAIR 10
Match: AT4G22850.1 (SNARE associated Golgi protein family ) HSP 1 Score: 63.5 bits (153), Expect = 3.6e-10 Identity = 77/274 (28.10%), Postives = 120/274 (43.80%), Query Frame = 0
BLAST of CSPI05G30890 vs. TAIR 10
Match: AT2G02370.1 (SNARE associated Golgi protein family ) HSP 1 Score: 62.4 bits (150), Expect = 8.0e-10 Identity = 63/238 (26.47%), Postives = 121/238 (50.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|