CSPI05G30390 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G30390
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Abhydrolase_3 domain-containing protein
Location	Chr5: 28341382 .. 28341567 (-)
RNA-Seq Expression	CSPI05G30390
Synteny	CSPI05G30390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGACTTTGGAAGAAACAGATTGGTATTGGAAAGCATTTTTGCCAAATGGGTCAAGCAGAAACCACCCGACAGCTCACGTGTTCGGAGCCAGTGGTGTTCGAGACATATCGAGCGCAGCGTTTCCACCGACGCTTTTGATCGTGGGAGGACGAGACCCTTTACGAGATTGGGAGAGTGGTTGA

mRNA sequence

ATGTTGACTTTGGAAGAAACAGATTGGTATTGGAAAGCATTTTTGCCAAATGGGTCAAGCAGAAACCACCCGACAGCTCACGTGTTCGGAGCCAGTGGTGTTCGAGACATATCGAGCGCAGCGTTTCCACCGACGCTTTTGATCGTGGGAGGACGAGACCCTTTACGAGATTGGGAGAGTGGTTGA

Coding sequence (CDS)

ATGTTGACTTTGGAAGAAACAGATTGGTATTGGAAAGCATTTTTGCCAAATGGGTCAAGCAGAAACCACCCGACAGCTCACGTGTTCGGAGCCAGTGGTGTTCGAGACATATCGAGCGCAGCGTTTCCACCGACGCTTTTGATCGTGGGAGGACGAGACCCTTTACGAGATTGGGAGAGTGGTTGA

Protein sequence

MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWESG*

Homology

[Close]

BLAST of CSPI05G30390 vs. ExPASy Swiss-Prot
Match: Q9MAA7 (Gibberellin receptor GID1A OS=Arabidopsis thaliana OX=3702 GN=GID1A PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-10
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 2   LTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           +T+ + DWYWKAFLP G  R HP  + F   G + +   +FP +L++V G D +RDW+
Sbjct: 239 VTVRDRDWYWKAFLPEGEDREHPACNPFSPRG-KSLEGVSFPKSLVVVAGLDLIRDWQ 295

[Close]

BLAST of CSPI05G30390 vs. ExPASy Swiss-Prot
Match: Q9LYC1 (Gibberellin receptor GID1B OS=Arabidopsis thaliana OX=3702 GN=GID1B PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.2e-10
Identity = 23/58 (39.66%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 2   LTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           +T+++ DWYW+A+LP G  R+HP  + FG  G + +    FP +L++V G D ++DW+
Sbjct: 239 VTIQDRDWYWRAYLPEGEDRDHPACNPFGPRG-QSLKGVNFPKSLVVVAGLDLVQDWQ 295

[Close]

BLAST of CSPI05G30390 vs. ExPASy Swiss-Prot
Match: Q940G6 (Gibberellin receptor GID1C OS=Arabidopsis thaliana OX=3702 GN=GID1C PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-09
Identity = 23/58 (39.66%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 2   LTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           +T+ + DWYW+AFLP G  R HP    FG    + +   +FP +L++V G D ++DW+
Sbjct: 237 VTVRDRDWYWRAFLPEGEDREHPACSPFGPRS-KSLEGLSFPKSLVVVAGLDLIQDWQ 293

[Close]

BLAST of CSPI05G30390 vs. ExPASy Swiss-Prot
Match: Q6L545 (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica OX=39947 GN=GID1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.6e-07
Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 2   LTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRD 54
           +TL++ DWYWKA+LP  + R+HP  + FG +G R +    F  +L+IV G D
Sbjct: 246 VTLQDRDWYWKAYLPEDADRDHPACNPFGPNG-RRLGGLPFAKSLIIVSGLD 296

[Close]

BLAST of CSPI05G30390 vs. ExPASy Swiss-Prot
Match: Q9LT10 (Probable carboxylesterase 18 OS=Arabidopsis thaliana OX=3702 GN=CXE18 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.7e-07
Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 1   MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           +++ + TDW WKA    G +R+H   +V G + V DIS   +P T+++V G DPL+DW+
Sbjct: 226 LVSPDRTDWCWKAM---GLNRDHEAVNVGGPNAV-DISGLDYPETMVVVAGFDPLKDWQ 280

[Close]

BLAST of CSPI05G30390 vs. ExPASy TrEMBL
Match: A0A5D3BQZ2 (Putative carboxylesterase 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001390 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 9.7e-26
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1   MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           MLTLEETDW WKAFLPNGSSRNHP AHVFGASGVRDISSA FPPTLLIVGGRDPLRDWE
Sbjct: 229 MLTLEETDWSWKAFLPNGSSRNHPAAHVFGASGVRDISSATFPPTLLIVGGRDPLRDWE 287

[Close]

BLAST of CSPI05G30390 vs. ExPASy TrEMBL
Match: A0A1S3CBK4 (probable carboxylesterase 18 OS=Cucumis melo OX=3656 GN=LOC103498629 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-24
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 2   LTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           LTLEETDW WKAFLPNGSSRNHP AHVFGASGVRD SSA FPPTLLIVGGRDPLRDWE
Sbjct: 231 LTLEETDWSWKAFLPNGSSRNHPAAHVFGASGVRDTSSATFPPTLLIVGGRDPLRDWE 288

[Close]

BLAST of CSPI05G30390 vs. ExPASy TrEMBL
Match: A0A6J1I994 (probable carboxylesterase 18 OS=Cucurbita maxima OX=3661 GN=LOC111472693 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.2e-17
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 1   MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDW 59
           ML+LE+ DWYWKAFLP+GS+RNHP AHVFGA G  D+    FP TLLIVGGRD LRDW
Sbjct: 221 MLSLEQADWYWKAFLPDGSNRNHPAAHVFGA-GAGDLPGEKFPTTLLIVGGRDQLRDW 277

[Close]

BLAST of CSPI05G30390 vs. ExPASy TrEMBL
Match: A0A6J1EW52 (probable carboxylesterase 18 OS=Cucurbita moschata OX=3662 GN=LOC111436652 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-16
Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 1   MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDW 59
           ML+LE+ DWYWKAFLP+GS+RNHP AHVFG    RD+ +  FP TLLIVGGRD LRDW
Sbjct: 221 MLSLEQADWYWKAFLPDGSNRNHPAAHVFGPD-ARDLPAENFPTTLLIVGGRDQLRDW 277

[Close]

BLAST of CSPI05G30390 vs. ExPASy TrEMBL
Match: A0A6J1DXC5 (probable carboxylesterase 18 OS=Momordica charantia OX=3673 GN=LOC111023986 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.0e-15
Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 1   MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDW 59
           M+ LE+ DWYWKAFLPNGS+RNHP AHVFG     DIS   FP  LLIVGG D LRDW
Sbjct: 227 MVNLEQADWYWKAFLPNGSNRNHPAAHVFGPD-AGDISGVKFPAXLLIVGGHDQLRDW 283

[Close]

BLAST of CSPI05G30390 vs. NCBI nr
Match: KAA0039346.1 (putative carboxylesterase 18 [Cucumis melo var. makuwa] >TYK00529.1 putative carboxylesterase 18 [Cucumis melo var. makuwa])

HSP 1 Score: 125.2 bits (313), Expect = 2.0e-25
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 1   MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           MLTLEETDW WKAFLPNGSSRNHP AHVFGASGVRDISSA FPPTLLIVGGRDPLRDWE
Sbjct: 229 MLTLEETDWSWKAFLPNGSSRNHPAAHVFGASGVRDISSATFPPTLLIVGGRDPLRDWE 287

[Close]

BLAST of CSPI05G30390 vs. NCBI nr
Match: XP_008459513.1 (PREDICTED: probable carboxylesterase 18 [Cucumis melo])

HSP 1 Score: 121.3 bits (303), Expect = 2.9e-24
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 2   LTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           LTLEETDW WKAFLPNGSSRNHP AHVFGASGVRD SSA FPPTLLIVGGRDPLRDWE
Sbjct: 231 LTLEETDWSWKAFLPNGSSRNHPAAHVFGASGVRDTSSATFPPTLLIVGGRDPLRDWE 288

[Close]

BLAST of CSPI05G30390 vs. NCBI nr
Match: KAE8648977.1 (hypothetical protein Csa_007840 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 4.3e-20
Identity = 51/57 (89.47%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 1   MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRD 58
           MLTLEETD  WKA LPNGSSRNHP AHVFGA  VRDISSAAFPPTLLIVGGRDPLRD
Sbjct: 204 MLTLEETDRSWKAILPNGSSRNHPAAHVFGADCVRDISSAAFPPTLLIVGGRDPLRD 260

[Close]

BLAST of CSPI05G30390 vs. NCBI nr
Match: XP_038889726.1 (probable carboxylesterase 18 [Benincasa hispida])

HSP 1 Score: 101.3 bits (251), Expect = 3.1e-18
Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 1   MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           MLTL++TDW WKAFLPNGSSRNHP AHVFGA GV D+SS  FP TLLIVGGRD L+DW+
Sbjct: 223 MLTLQQTDWSWKAFLPNGSSRNHPAAHVFGA-GVGDMSSIVFPATLLIVGGRDLLQDWQ 280

[Close]

BLAST of CSPI05G30390 vs. NCBI nr
Match: XP_022974072.1 (probable carboxylesterase 18 [Cucurbita maxima])

HSP 1 Score: 95.5 bits (236), Expect = 1.7e-16
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 1   MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDW 59
           ML+LE+ DWYWKAFLP+GS+RNHP AHVFGA G  D+    FP TLLIVGGRD LRDW
Sbjct: 221 MLSLEQADWYWKAFLPDGSNRNHPAAHVFGA-GAGDLPGEKFPTTLLIVGGRDQLRDW 277

[Close]

BLAST of CSPI05G30390 vs. TAIR 10
Match: AT3G05120.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 7.9e-12
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 2   LTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           +T+ + DWYWKAFLP G  R HP  + F   G + +   +FP +L++V G D +RDW+
Sbjct: 239 VTVRDRDWYWKAFLPEGEDREHPACNPFSPRG-KSLEGVSFPKSLVVVAGLDLIRDWQ 295

[Close]

BLAST of CSPI05G30390 vs. TAIR 10
Match: AT3G63010.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 3.0e-11
Identity = 23/58 (39.66%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 2   LTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           +T+++ DWYW+A+LP G  R+HP  + FG  G + +    FP +L++V G D ++DW+
Sbjct: 239 VTIQDRDWYWRAYLPEGEDRDHPACNPFGPRG-QSLKGVNFPKSLVVVAGLDLVQDWQ 295

[Close]

BLAST of CSPI05G30390 vs. TAIR 10
Match: AT5G27320.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-10
Identity = 23/58 (39.66%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 2   LTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           +T+ + DWYW+AFLP G  R HP    FG    + +   +FP +L++V G D ++DW+
Sbjct: 237 VTVRDRDWYWRAFLPEGEDREHPACSPFGPRS-KSLEGLSFPKSLVVVAGLDLIQDWQ 293

[Close]

BLAST of CSPI05G30390 vs. TAIR 10
Match: AT5G23530.1 (carboxyesterase 18 )

HSP 1 Score: 54.3 bits (129), Expect = 4.1e-08
Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 1   MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRDWE 60
           +++ + TDW WKA    G +R+H   +V G + V DIS   +P T+++V G DPL+DW+
Sbjct: 226 LVSPDRTDWCWKAM---GLNRDHEAVNVGGPNAV-DISGLDYPETMVVVAGFDPLKDWQ 280

[Close]

BLAST of CSPI05G30390 vs. TAIR 10
Match: AT5G06570.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 1.7e-06
Identity = 23/57 (40.35%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 1   MLTLEETDWYWKAFLPNGSSRNHPTAHVFGASGVRDISSAAFPPTLLIVGGRDPLRD 58
           +L+L+  D +W+  LPNG++R+H  A+ FG +    + S +  P L+IVGG + LRD
Sbjct: 220 LLSLDLLDKFWRLSLPNGATRDHHMANPFGPTS-PTLESISLEPMLVIVGGSELLRD 275

The following BLAST results are available for this feature:

BLAST of CSPI05G30390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAA7	1.1e-10	43.10	Gibberellin receptor GID1A OS=Arabidopsis thaliana OX=3702 GN=GID1A PE=1 SV=1	[more]
Q9LYC1	4.2e-10	39.66	Gibberellin receptor GID1B OS=Arabidopsis thaliana OX=3702 GN=GID1B PE=1 SV=1	[more]
Q940G6	1.6e-09	39.66	Gibberellin receptor GID1C OS=Arabidopsis thaliana OX=3702 GN=GID1C PE=1 SV=1	[more]
Q6L545	2.6e-07	44.23	Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica OX=39947 GN=GID1 PE=1 ...	[more]
Q9LT10	5.7e-07	40.68	Probable carboxylesterase 18 OS=Arabidopsis thaliana OX=3702 GN=CXE18 PE=1 SV=1	[more]

BLAST of CSPI05G30390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQZ2	9.7e-26	94.92	Putative carboxylesterase 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CBK4	1.4e-24	93.10	probable carboxylesterase 18 OS=Cucumis melo OX=3656 GN=LOC103498629 PE=4 SV=1	[more]
A0A6J1I994	8.2e-17	72.41	probable carboxylesterase 18 OS=Cucurbita maxima OX=3661 GN=LOC111472693 PE=4 SV...	[more]
A0A6J1EW52	1.8e-16	70.69	probable carboxylesterase 18 OS=Cucurbita moschata OX=3662 GN=LOC111436652 PE=4 ...	[more]
A0A6J1DXC5	2.0e-15	68.97	probable carboxylesterase 18 OS=Momordica charantia OX=3673 GN=LOC111023986 PE=4...	[more]

BLAST of CSPI05G30390 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039346.1	2.0e-25	94.92	putative carboxylesterase 18 [Cucumis melo var. makuwa] >TYK00529.1 putative car...	[more]
XP_008459513.1	2.9e-24	93.10	PREDICTED: probable carboxylesterase 18 [Cucumis melo]	[more]
KAE8648977.1	4.3e-20	89.47	hypothetical protein Csa_007840 [Cucumis sativus]	[more]
XP_038889726.1	3.1e-18	77.97	probable carboxylesterase 18 [Benincasa hispida]	[more]
XP_022974072.1	1.7e-16	72.41	probable carboxylesterase 18 [Cucurbita maxima]	[more]

BLAST of CSPI05G30390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05120.1	7.9e-12	43.10	alpha/beta-Hydrolases superfamily protein	[more]
AT3G63010.1	3.0e-11	39.66	alpha/beta-Hydrolases superfamily protein	[more]
AT5G27320.1	1.1e-10	39.66	alpha/beta-Hydrolases superfamily protein	[more]
AT5G23530.1	4.1e-08	40.68	carboxyesterase 18	[more]
AT5G06570.1	1.7e-06	40.35	alpha/beta-Hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820	alpha/beta hydrolase	coord: 1..60 e-value: 6.2E-12 score: 47.4
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 2..59
IPR013094	Alpha/beta hydrolase fold-3	PFAM	PF07859	Abhydrolase_3	coord: 2..59 e-value: 5.4E-9 score: 36.2
None	No IPR available	PANTHER	PTHR23024	ARYLACETAMIDE DEACETYLASE	coord: 1..59
None	No IPR available	PANTHER	PTHR23024:SF434	ACETYL ESTERASE	coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G30390.1	CSPI05G30390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity