CSPI05G30080 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G30080
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	HEAT repeat-containing protein 5B
Location	Chr5: 28096604 .. 28097237 (+)
RNA-Seq Expression	CSPI05G30080
Synteny	CSPI05G30080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTGCTCGCACTCTATAATGGTGAAGACTTACGTGAGAGAGAATGTGCCTCTCTCTCGTTTCGGTGTATTGGTAGCTCAGCTGGAATCCATAGTTGCCTCCGCTGCTCAACAACCACCGGAGCCCCTTCTATGCTTCGATCTTCTTTCCGATCTCATTTCCGCCATCGACGAAGAACCCAAGGTTCACCCTTTTAATTTCGCTGCATTTTCATTTTTGTTCAATTAGCATCCATCGAATATGTTCTATTGGTTTTTTACTGCCAACTTTTACATTAAGAAGATAAAGTATTGAATTATGTGATATTATGCGGATCTTTATGAGTTGGTATCGGAAATGGAATTATTATGGGCAGTCAGTTTTATTTTGACATGTTTCTGCTATTTTCATTATCGTTTCCATCTTGCATTGTCCACGGGTGGGAATATCTGTCTTCATTGGGTATCTGGCTATGAAGTTTTAATTTTCCTCCGTGCAAACGAAGGTTATAGAGTTCCCCATTATGTAATTGTTATTCAGCACCGTACTACTGGTGAGAATGAAGGAGACAGTCACAGAGAAGCACAGAGCACAGACACCTCCATGGATATCAATAACAGAAAAGGGTACAAAGATAAAAGATACATTGAGTAG

mRNA sequence

TTCCTGCTCGCACTCTATAATGGTGAAGACTTACGTGAGAGAGAATGTGCCTCTCTCTCGTTTCGGTGTATTGGTAGCTCAGCTGGAATCCATAGTTGCCTCCGCTGCTCAACAACCACCGGAGCCCCTTCTATGCTTCGATCTTCTTTCCGATCTCATTTCCGCCATCGACGAAGAACCCAAGCACCGTACTACTGGTGAGAATGAAGGAGACAGTCACAGAGAAGCACAGAGCACAGACACCTCCATGGATATCAATAACAGAAAAGGGTACAAAGATAAAAGATACATTGAGTAG

Coding sequence (CDS)

ATGGTGAAGACTTACGTGAGAGAGAATGTGCCTCTCTCTCGTTTCGGTGTATTGGTAGCTCAGCTGGAATCCATAGTTGCCTCCGCTGCTCAACAACCACCGGAGCCCCTTCTATGCTTCGATCTTCTTTCCGATCTCATTTCCGCCATCGACGAAGAACCCAAGCACCGTACTACTGGTGAGAATGAAGGAGACAGTCACAGAGAAGCACAGAGCACAGACACCTCCATGGATATCAATAACAGAAAAGGGTACAAAGATAAAAGATACATTGAGTAG

Protein sequence

MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKHRTTGENEGDSHREAQSTDTSMDINNRKGYKDKRYIE*

Homology

[Close]

BLAST of CSPI05G30080 vs. ExPASy Swiss-Prot
Match: F4HRS2 (Protein SWEETIE OS=Arabidopsis thaliana OX=3702 GN=SWEETIE PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 56
          M K    +NVPLSRFGVLVAQLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK
Sbjct: 1  MTKNIASDNVPLSRFGVLVAQLESIVASASQKNPDPLLCFEILSDLISAIDEEPK 55

[Close]

BLAST of CSPI05G30080 vs. ExPASy TrEMBL
Match: A0A0A0KUL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644560 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKHRTTG 60
          MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK RTTG
Sbjct: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKQRTTG 60

Query: 61 ENEGDSHREAQSTDTSMDINNRKGYKDKRYIE 93
          ENEGDSHREAQSTDTSMDINNRKGYKDKRYIE
Sbjct: 61 ENEGDSHREAQSTDTSMDINNRKGYKDKRYIE 92

[Close]

BLAST of CSPI05G30080 vs. ExPASy TrEMBL
Match: A0A5D3BP95 (HEAT repeat-containing protein 5B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001770 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.0e-30
Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKHRTTG 60
          MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK RTTG
Sbjct: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKQRTTG 60

Query: 61 ENEGDSHREAQSTDTSMDI 80
          E +GD HREAQST+TS+DI
Sbjct: 61 EIKGDRHREAQSTNTSVDI 79

[Close]

BLAST of CSPI05G30080 vs. ExPASy TrEMBL
Match: A0A5A7T8T6 (HEAT repeat-containing protein 5B isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001750 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 56
          MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK
Sbjct: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 55

[Close]

BLAST of CSPI05G30080 vs. ExPASy TrEMBL
Match: A0A6J1FM35 (protein SWEETIE isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445452 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 56
          MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK
Sbjct: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 55

[Close]

BLAST of CSPI05G30080 vs. ExPASy TrEMBL
Match: A0A6J1FN77 (protein SWEETIE isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445452 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 56
          MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK
Sbjct: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 55

[Close]

BLAST of CSPI05G30080 vs. NCBI nr
Match: TYK00562.1 (HEAT repeat-containing protein 5B [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 4.1e-30
Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKHRTTG 60
          MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK RTTG
Sbjct: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKQRTTG 60

Query: 61 ENEGDSHREAQSTDTSMDI 80
          E +GD HREAQST+TS+DI
Sbjct: 61 EIKGDRHREAQSTNTSVDI 79

[Close]

BLAST of CSPI05G30080 vs. NCBI nr
Match: XP_022939608.1 (protein SWEETIE isoform X1 [Cucurbita moschata])

HSP 1 Score: 108.2 bits (269), Expect = 3.8e-20
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 56
          MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK
Sbjct: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 55

[Close]

BLAST of CSPI05G30080 vs. NCBI nr
Match: XP_008459470.1 (PREDICTED: HEAT repeat-containing protein 5B isoform X2 [Cucumis melo])

HSP 1 Score: 108.2 bits (269), Expect = 3.8e-20
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 56
          MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK
Sbjct: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 55

[Close]

BLAST of CSPI05G30080 vs. NCBI nr
Match: XP_023550988.1 (protein SWEETIE isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108.2 bits (269), Expect = 3.8e-20
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 56
          MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK
Sbjct: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 55

[Close]

BLAST of CSPI05G30080 vs. NCBI nr
Match: KAG6578499.1 (Protein SWEETIE, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 108.2 bits (269), Expect = 3.8e-20
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 56
          MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK
Sbjct: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 55

[Close]

BLAST of CSPI05G30080 vs. TAIR 10
Match: AT1G67140.1 (HEAT repeat-containing protein )

HSP 1 Score: 87.0 bits (214), Expect = 8.5e-18
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 56
          M K    +NVPLSRFGVLVAQLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK
Sbjct: 1  MTKNIASDNVPLSRFGVLVAQLESIVASASQKNPDPLLCFEILSDLISAIDEEPK 55

[Close]

BLAST of CSPI05G30080 vs. TAIR 10
Match: AT1G67140.3 (HEAT repeat-containing protein )

HSP 1 Score: 87.0 bits (214), Expect = 8.5e-18
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 56
          M K    +NVPLSRFGVLVAQLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK
Sbjct: 1  MTKNIASDNVPLSRFGVLVAQLESIVASASQKNPDPLLCFEILSDLISAIDEEPK 55

[Close]

BLAST of CSPI05G30080 vs. TAIR 10
Match: AT1G67140.2 (HEAT repeat-containing protein )

HSP 1 Score: 87.0 bits (214), Expect = 8.5e-18
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 0


Query: 1  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK 56
          M K    +NVPLSRFGVLVAQLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK
Sbjct: 1  MTKNIASDNVPLSRFGVLVAQLESIVASASQKNPDPLLCFEILSDLISAIDEEPK 55

The following BLAST results are available for this feature:

BLAST of CSPI05G30080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HRS2	1.2e-16	78.18	Protein SWEETIE OS=Arabidopsis thaliana OX=3702 GN=SWEETIE PE=1 SV=2	[more]

BLAST of CSPI05G30080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUL5	1.5e-41	98.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644560 PE=4 SV=1	[more]
A0A5D3BP95	2.0e-30	92.41	HEAT repeat-containing protein 5B OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T8T6	1.8e-20	100.00	HEAT repeat-containing protein 5B isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1FM35	1.8e-20	100.00	protein SWEETIE isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445452 PE=4 SV...	[more]
A0A6J1FN77	1.8e-20	100.00	protein SWEETIE isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445452 PE=4 SV...	[more]

BLAST of CSPI05G30080 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00562.1	4.1e-30	92.41	HEAT repeat-containing protein 5B [Cucumis melo var. makuwa]	[more]
XP_022939608.1	3.8e-20	100.00	protein SWEETIE isoform X1 [Cucurbita moschata]	[more]
XP_008459470.1	3.8e-20	100.00	PREDICTED: HEAT repeat-containing protein 5B isoform X2 [Cucumis melo]	[more]
XP_023550988.1	3.8e-20	100.00	protein SWEETIE isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6578499.1	3.8e-20	100.00	Protein SWEETIE, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CSPI05G30080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67140.1	8.5e-18	78.18	HEAT repeat-containing protein	[more]
AT1G67140.3	8.5e-18	78.18	HEAT repeat-containing protein	[more]
AT1G67140.2	8.5e-18	78.18	HEAT repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..92
IPR044218	Protein SWEETIE	PANTHER	PTHR46975	PROTEIN SWEETIE	coord: 3..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G30080.1	CSPI05G30080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process