CSPI05G29750 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G29750
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Stress-induced protein KIN2-like
Location	Chr5: 27899941 .. 27901017 (-)
RNA-Seq Expression	CSPI05G29750
Synteny	CSPI05G29750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGCCATATATCAAGTGTTTTTCAAGTTCTCATTTATTTGTTTGTGTGTTTTGAAGCTGTATTTAAAACTGTTAAAATGGCAGATAACTCTCAGAAGATGAGCTACCATGCTGGAGAGGCCAAGGGCCAAACTCAGGTTTGTTTTATTCATCTATTATGATCATCATCTTCCTTTCCTCTTCTTTTATTTACATATTTAACATCGCATAGTTCAGGATAGATTTTCATCGATAATTAGATGCAGTAACGCATTCATTAACCTTTTCTTTAACATGTTTATTGACCCCATTTTGTAAATGTAATTTGATTATCATTGTGTTGTAGTTTATCTAATTGTTACTATTTGCGTAAAAATAATGATAATCTTGTTTTTATGATTTTTTTTATCAATATCGAACAAATTATCTTCCATAGTTTGAGAATTTTTTTTACTAGTGGGTCTCACACTTTTTATCATTGGTAATATGTTCTTACATGAATATAGTGGGTCTCACATTCTTTTCAAATTTAATATGTTGAGTGTCCTTTACTTCTATTATTTTCAAATGGAATATGTTTATGGATTATTCACGATTGATGAATTAGGTTACTCATGCTGTAAATGTAACCCTAGTGAATACAGCAATATGATGGATAACATTTTATTTCACATATTTCTAGCCATCCATGATATAGCCTAGCTAAGCAATAATTCTATATTATTACAGGGTCTGGTTTGGGTTGTAGTGATGGGTAACGTTGTTAAGTTAAGTTTGTATGTGTTGATTAATGTGTAGGAGAAGATGAGCAATATGATGGATAAGGCAAGTGATGCAGCTCAATCAGCTAAAGAATCAGTACAAGAGACTGGACAACAAATGATGGCTAAGGCTCAAGGAGCTGCTGATGCTGTTAAGGATGCTGTCAACAAATGATGATCATTTCTATATCTTTTTTTTTTATTATTTCTTCATCTATTTAATGTATTTTTCCAAGCCTTTCTCTTTGTAAAAGGGAGAGAATAAATGAGTTTTTGGAATTTCAGTGTTACAAATGGGTGTTTTTTCTTGTAGTGAATGATATATAATAATAGCAAA

mRNA sequence

AGAGCCATATATCAAGTGTTTTTCAAGTTCTCATTTATTTGTTTGTGTGTTTTGAAGCTGTATTTAAAACTGTTAAAATGGCAGATAACTCTCAGAAGATGAGCTACCATGCTGGAGAGGCCAAGGGCCAAACTCAGGAGAAGATGAGCAATATGATGGATAAGGCAAGTGATGCAGCTCAATCAGCTAAAGAATCAGTACAAGAGACTGGACAACAAATGATGGCTAAGGCTCAAGGAGCTGCTGATGCTGTTAAGGATGCTGTCAACAAATGATGATCATTTCTATATCTTTTTTTTTTATTATTTCTTCATCTATTTAATGTATTTTTCCAAGCCTTTCTCTTTGTAAAAGGGAGAGAATAAATGAGTTTTTGGAATTTCAGTGTTACAAATGGGTGTTTTTTCTTGTAGTGAATGATATATAATAATAGCAAA

Coding sequence (CDS)

ATGGCAGATAACTCTCAGAAGATGAGCTACCATGCTGGAGAGGCCAAGGGCCAAACTCAGGAGAAGATGAGCAATATGATGGATAAGGCAAGTGATGCAGCTCAATCAGCTAAAGAATCAGTACAAGAGACTGGACAACAAATGATGGCTAAGGCTCAAGGAGCTGCTGATGCTGTTAAGGATGCTGTCAACAAATGA

Protein sequence

MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDAVNK*

Homology

[Close]

BLAST of CSPI05G29750 vs. ExPASy TrEMBL
Match: A0A0A0KXN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.7e-24
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60
          MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60

Query: 61 DAVNK 66
          DAVNK
Sbjct: 61 DAVNK 65

[Close]

BLAST of CSPI05G29750 vs. ExPASy TrEMBL
Match: A0A5A7TD88 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G002080 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20
Identity = 59/65 (90.77%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60
          MADNSQKMSY+AGEAKGQTQEK+SNMMDKAS+AA+SAKES QETGQQMMAKA+GAADAVK
Sbjct: 1  MADNSQKMSYNAGEAKGQTQEKVSNMMDKASNAAESAKESAQETGQQMMAKAEGAADAVK 60

Query: 61 DAVNK 66
          DAVNK
Sbjct: 61 DAVNK 65

[Close]

BLAST of CSPI05G29750 vs. ExPASy TrEMBL
Match: A0A5D3BLF3 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002100 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20
Identity = 59/65 (90.77%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60
          MADNSQKMSY+AGEAKGQTQEK SNMMDKAS+AA+SAKES+QE+GQQMMAKAQGAADAVK
Sbjct: 1  MADNSQKMSYNAGEAKGQTQEKASNMMDKASNAAESAKESIQESGQQMMAKAQGAADAVK 60

Query: 61 DAVNK 66
          DAVNK
Sbjct: 61 DAVNK 65

[Close]

BLAST of CSPI05G29750 vs. ExPASy TrEMBL
Match: A0A1S3CAQ3 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498581 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.9e-20
Identity = 58/65 (89.23%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60
          MADNSQKMSY+AGEAKGQTQEK+SNMMDKAS+AA+SAKES QETGQQ+MAKA+GAADAVK
Sbjct: 1  MADNSQKMSYNAGEAKGQTQEKVSNMMDKASNAAESAKESAQETGQQIMAKAEGAADAVK 60

Query: 61 DAVNK 66
          DAVNK
Sbjct: 61 DAVNK 65

[Close]

BLAST of CSPI05G29750 vs. ExPASy TrEMBL
Match: A0A5D3BPC0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002090 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.8e-20
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 3  DNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDA 62
          DNSQKMSYHAGEAKGQTQEK+SNMMDKAS+AAQS KESVQE GQQMMAKAQGA DAVKDA
Sbjct: 2  DNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKDA 61

Query: 63 VNK 66
          VNK
Sbjct: 62 VNK 64

[Close]

BLAST of CSPI05G29750 vs. NCBI nr
Match: XP_004141485.1 (late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical protein Csa_008504 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 2.0e-23
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60
          MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60

Query: 61 DAVNK 66
          DAVNK
Sbjct: 61 DAVNK 65

[Close]

BLAST of CSPI05G29750 vs. NCBI nr
Match: KAA0039405.1 (stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 2.1e-20
Identity = 59/65 (90.77%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60
          MADNSQKMSY+AGEAKGQTQEK+SNMMDKAS+AA+SAKES QETGQQMMAKA+GAADAVK
Sbjct: 1  MADNSQKMSYNAGEAKGQTQEKVSNMMDKASNAAESAKESAQETGQQMMAKAEGAADAVK 60

Query: 61 DAVNK 66
          DAVNK
Sbjct: 61 DAVNK 65

[Close]

BLAST of CSPI05G29750 vs. NCBI nr
Match: TYK00593.1 (stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 2.1e-20
Identity = 59/65 (90.77%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60
          MADNSQKMSY+AGEAKGQTQEK SNMMDKAS+AA+SAKES+QE+GQQMMAKAQGAADAVK
Sbjct: 1  MADNSQKMSYNAGEAKGQTQEKASNMMDKASNAAESAKESIQESGQQMMAKAQGAADAVK 60

Query: 61 DAVNK 66
          DAVNK
Sbjct: 61 DAVNK 65

[Close]

BLAST of CSPI05G29750 vs. NCBI nr
Match: XP_008459450.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 107.1 bits (266), Expect = 6.0e-20
Identity = 58/65 (89.23%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60
          MADNSQKMSY+AGEAKGQTQEK+SNMMDKAS+AA+SAKES QETGQQ+MAKA+GAADAVK
Sbjct: 1  MADNSQKMSYNAGEAKGQTQEKVSNMMDKASNAAESAKESAQETGQQIMAKAEGAADAVK 60

Query: 61 DAVNK 66
          DAVNK
Sbjct: 61 DAVNK 65

[Close]

BLAST of CSPI05G29750 vs. NCBI nr
Match: XP_008459449.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039404.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa] >TYK00592.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 7.9e-20
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 3  DNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDA 62
          DNSQKMSYHAGEAKGQTQEK+SNMMDKAS+AAQS KESVQE GQQMMAKAQGA DAVKDA
Sbjct: 2  DNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKDA 61

Query: 63 VNK 66
          VNK
Sbjct: 62 VNK 64

[Close]

BLAST of CSPI05G29750 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-15
Identity = 41/61 (67.21%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60
          M++NSQ MS++AG+AKGQTQEK SN++DKAS+AAQSAKES+QE GQQ+  KAQGA++ +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of CSPI05G29750 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 79.0 bits (193), Expect = 1.6e-15
Identity = 43/62 (69.35%), Postives = 54/62 (87.10%), Query Frame = 0


Query: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60
          M+ NSQ +S+ AG+AKGQTQEK S MMDKAS+AAQSAKES++ETGQQ+  KAQGA ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DA 63
          +A
Sbjct: 61 NA 62

[Close]

BLAST of CSPI05G29750 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 73.2 bits (178), Expect = 9.0e-14
Identity = 40/59 (67.80%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 3  DNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKD 62
          DN Q  SY AG+A GQT+EK   MMDKA DAA SA++S+Q+TGQQM  KAQGAAD VKD
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKD 60

[Close]

BLAST of CSPI05G29750 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 41.6 bits (96), Expect = 2.9e-04
Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 0


Query: 6  QKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDAVNK 65
          Q+ SY AGE +G+ QEK    M    D  Q+AK+  QET Q    KA   A + KD  ++
Sbjct: 5  QEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKDKTSQ 64

[Close]

BLAST of CSPI05G29750 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 41.6 bits (96), Expect = 2.9e-04
Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 0


Query: 6  QKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDAVNK 65
          Q+ SY AGE +G+ QEK    M    D  Q+AK+  QET Q    KA   A + KD  ++
Sbjct: 5  QEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKDKTSQ 64

The following BLAST results are available for this feature:

BLAST of CSPI05G29750 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G29750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXN2	9.7e-24	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1	[more]
A0A5A7TD88	1.0e-20	90.77	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3BLF3	1.0e-20	90.77	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CAQ3	2.9e-20	89.23	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498581 PE=4 SV...	[more]
A0A5D3BPC0	3.8e-20	92.06	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of CSPI05G29750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141485.1	2.0e-23	100.00	late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical...	[more]
KAA0039405.1	2.1e-20	90.77	stress-induced protein KIN2-like [Cucumis melo var. makuwa]	[more]
TYK00593.1	2.1e-20	90.77	stress-induced protein KIN2-like [Cucumis melo var. makuwa]	[more]
XP_008459450.1	6.0e-20	89.23	PREDICTED: stress-induced protein KIN2-like [Cucumis melo]	[more]
XP_008459449.1	7.9e-20	92.06	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039404.1 stress-...	[more]

BLAST of CSPI05G29750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53820.1	1.3e-15	67.21	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G38760.1	1.6e-15	69.35	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	9.0e-14	67.80	Late embryogenesis abundant protein (LEA) family protein	[more]
AT1G52690.1	2.9e-04	40.00	Late embryogenesis abundant protein (LEA) family protein	[more]
AT1G52690.2	2.9e-04	40.00	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.1430		coord: 2..46 e-value: 8.8E-6 score: 27.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	PANTHER	PTHR34191:SF4	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 3..65
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 3..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G29750.1	CSPI05G29750.1	mRNA