CSPI05G29730 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G29730
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr5: 27894386 .. 27896353 (-)
RNA-Seq ExpressionCSPI05G29730
SyntenyCSPI05G29730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTTTCATGGCGATTACTTCGTTTACGACCTCACCTTCGCATTTCATCCAACTCTTCACATTTTCAGGTACTTTCCCATCCCAATCTTCAATCACTTCGCTCTTTATCGTCTTTGTTTCCTAAACATCCCCTTCACCATACCCCCTCGCCGCCCATTTCCGATTTTTACTTCACAAGTATCGTAAGACCCATTTACGGTACCCTTAGAACGTTTTCCTCCGAACCGGCGGCTGAACAGGAATCTGATCATGCTGTTATAGTTGACATTTTATCTAAATCTCGCGATGTGGATGAAATTAGGAAGGGTTTAGAGTCGAATGGTGTTGTTATTAGTCATGATTTGGTTTTGGAGGTATTGGGGCAGCTCGAGTCGAACCCTGATGATGCTATCCGGTTTTTTGATTGGGTGTCGGGGGATTATGGTGAGAAACTTAGCTCCAAGTCGTTTAATTTGATGCTGGGTATTTTAGGTGTTAATGGGCTTGTTAAGAAGTTTTGGGATTTGAATTGTGATATGAAGAAAAAGGGTTATGGAATGTCTAAAACTGTACGGGATAAGGTACTGGAGAAGTTTGATAAGGATGGATTGAAGAGTGAGGCTGAGAAGTTGAGAGATATGTTTGCTTCAGGATCCACTGACAAATCTCCGGATAATATTGGTTCAAACGTCAGCAGACTTATCAGGACGAATTTGTGGGGAGAGGATGTTGAACAGCAGCTGCGTGATATGAGTGTTTCGTTTTCAAGTGATATGGTTAAGATGATATTGGAGGATCTTAGCACAGACCCAGCAAAAGCATATATATTTTTCCTATGGATTGATGAGAGTGGGATGTTTAAGCATGATGAGCAAACTTATAACGCCATGGCTAGGGTGTTAGGAAGGGAAGATTGTATTGATAGATTTTGGAAAGTAGTAGATGAAATGAGGAGTCAAGGTTACAAAATGGAAATGGAGACATTTACCAAGGTGTTGGGACGATTTTGTAAAAGAAGAATGATTGAGGAAGCTGTAAATTTGTATGTCTTTGCAATGTCAGTAGGTGATAAGCCTTCGGAGGATTGTCTTACTTTTCTGTTAAAGAAAATAGCAGTAAGTGAGCAGTTTGATCTAGATCTATTCTCAAGGGCATTGAAGATATTTTCAGAGTCAGGTAATGTGTTGAAGGATTCAATGGTTTTTGCAGTTCTCAGGTCTCTGTCTAGTGTTGGTAGAACTGGAGAGTTCAATGAGGTTTTAAATGTAATGAAAGAGTATGGATATGTATGTAGTGGTGGTTTGAAGAGAAAGGTTGCATATCGACTCAGTAGGACAGGAAAAAGTGATGAAGCTAATGATTTCATGAATAACTTAGAAGCTTCTGGATGTAATCCAGACAACAAGACCTGGGCATCTTTGATTGAAGGGCATTGTGCTGCTGGAGATCTTGACAAGGCTTCTGATTGTATCCACAAAATGGTTGAGAAAGGAGGGGTCCCTTCTGCTGCATATGCTTTGGATTTAATAGTAAATGGTTACTGTCAAAAGAAACATGAAACTGATGCTAGCCATCTTCTCTTCGATCTTGTTGATAAAAGCCAGCTAAAACCACGACATTCTACTTACAAAACATTGATAAACAAGCTACTGCTCTGTGGGGAATTCAAAGATGCTTTAAAATTGTTGGGGATGATGAGAAATCATGAATTCCCACCATTTATTGAACCATTTATCTCATATGTATCCAAGTCTGGAACAGCTGATGATGGCCTTGAATTCCTAAAGGGCATGACATCGAAGAAATTTCCTTCAACGACTGTAGTTCTCCAATTATTTGAAGCATTTTTCCAAGCTGGAAGGCACGGAGATGCTCAAGACCTTCTTTTAAAATGCCCCGGTTACATTCGTAACCATGCTGATGTTTTGGATCTTTTTTGTTCCATGAAGCCTGTAGAAGCTGCTGCTTCCCCAAATCTGACTTCT

mRNA sequence

ATGAGATTTTCATGGCGATTACTTCGTTTACGACCTCACCTTCGCATTTCATCCAACTCTTCACATTTTCAGGTACTTTCCCATCCCAATCTTCAATCACTTCGCTCTTTATCGTCTTTGTTTCCTAAACATCCCCTTCACCATACCCCCTCGCCGCCCATTTCCGATTTTTACTTCACAAGTATCGTAAGACCCATTTACGGTACCCTTAGAACGTTTTCCTCCGAACCGGCGGCTGAACAGGAATCTGATCATGCTGTTATAGTTGACATTTTATCTAAATCTCGCGATGTGGATGAAATTAGGAAGGGTTTAGAGTCGAATGGTGTTGTTATTAGTCATGATTTGGTTTTGGAGGTATTGGGGCAGCTCGAGTCGAACCCTGATGATGCTATCCGGTTTTTTGATTGGGTGTCGGGGGATTATGGTGAGAAACTTAGCTCCAAGTCGTTTAATTTGATGCTGGGTATTTTAGGTGTTAATGGGCTTGTTAAGAAGTTTTGGGATTTGAATTGTGATATGAAGAAAAAGGGTTATGGAATGTCTAAAACTGTACGGGATAAGGTACTGGAGAAGTTTGATAAGGATGGATTGAAGAGTGAGGCTGAGAAGTTGAGAGATATGTTTGCTTCAGGATCCACTGACAAATCTCCGGATAATATTGGTTCAAACGTCAGCAGACTTATCAGGACGAATTTGTGGGGAGAGGATGTTGAACAGCAGCTGCGTGATATGAGTGTTTCGTTTTCAAGTGATATGGTTAAGATGATATTGGAGGATCTTAGCACAGACCCAGCAAAAGCATATATATTTTTCCTATGGATTGATGAGAGTGGGATGTTTAAGCATGATGAGCAAACTTATAACGCCATGGCTAGGGTGTTAGGAAGGGAAGATTGTATTGATAGATTTTGGAAAGTAGTAGATGAAATGAGGAGTCAAGGTTACAAAATGGAAATGGAGACATTTACCAAGGTGTTGGGACGATTTTGTAAAAGAAGAATGATTGAGGAAGCTGTAAATTTGTATGTCTTTGCAATGTCAGTAGGTGATAAGCCTTCGGAGGATTGTCTTACTTTTCTGTTAAAGAAAATAGCAGTAAGTGAGCAGTTTGATCTAGATCTATTCTCAAGGGCATTGAAGATATTTTCAGAGTCAGGTAATGTGTTGAAGGATTCAATGGTTTTTGCAGTTCTCAGGTCTCTGTCTAGTGTTGGTAGAACTGGAGAGTTCAATGAGGTTTTAAATGTAATGAAAGAGTATGGATATGTATGTAGTGGTGGTTTGAAGAGAAAGGTTGCATATCGACTCAGTAGGACAGGAAAAAGTGATGAAGCTAATGATTTCATGAATAACTTAGAAGCTTCTGGATGTAATCCAGACAACAAGACCTGGGCATCTTTGATTGAAGGGCATTGTGCTGCTGGAGATCTTGACAAGGCTTCTGATTGTATCCACAAAATGGTTGAGAAAGGAGGGGTCCCTTCTGCTGCATATGCTTTGGATTTAATAGTAAATGGTTACTGTCAAAAGAAACATGAAACTGATGCTAGCCATCTTCTCTTCGATCTTGTTGATAAAAGCCAGCTAAAACCACGACATTCTACTTACAAAACATTGATAAACAAGCTACTGCTCTGTGGGGAATTCAAAGATGCTTTAAAATTGTTGGGGATGATGAGAAATCATGAATTCCCACCATTTATTGAACCATTTATCTCATATGTATCCAAGTCTGGAACAGCTGATGATGGCCTTGAATTCCTAAAGGGCATGACATCGAAGAAATTTCCTTCAACGACTGTAGTTCTCCAATTATTTGAAGCATTTTTCCAAGCTGGAAGGCACGGAGATGCTCAAGACCTTCTTTTAAAATGCCCCGGTTACATTCGTAACCATGCTGATGTTTTGGATCTTTTTTGTTCCATGAAGCCTGTAGAAGCTGCTGCTTCCCCAAATCTGACTTCT

Coding sequence (CDS)

ATGAGATTTTCATGGCGATTACTTCGTTTACGACCTCACCTTCGCATTTCATCCAACTCTTCACATTTTCAGGTACTTTCCCATCCCAATCTTCAATCACTTCGCTCTTTATCGTCTTTGTTTCCTAAACATCCCCTTCACCATACCCCCTCGCCGCCCATTTCCGATTTTTACTTCACAAGTATCGTAAGACCCATTTACGGTACCCTTAGAACGTTTTCCTCCGAACCGGCGGCTGAACAGGAATCTGATCATGCTGTTATAGTTGACATTTTATCTAAATCTCGCGATGTGGATGAAATTAGGAAGGGTTTAGAGTCGAATGGTGTTGTTATTAGTCATGATTTGGTTTTGGAGGTATTGGGGCAGCTCGAGTCGAACCCTGATGATGCTATCCGGTTTTTTGATTGGGTGTCGGGGGATTATGGTGAGAAACTTAGCTCCAAGTCGTTTAATTTGATGCTGGGTATTTTAGGTGTTAATGGGCTTGTTAAGAAGTTTTGGGATTTGAATTGTGATATGAAGAAAAAGGGTTATGGAATGTCTAAAACTGTACGGGATAAGGTACTGGAGAAGTTTGATAAGGATGGATTGAAGAGTGAGGCTGAGAAGTTGAGAGATATGTTTGCTTCAGGATCCACTGACAAATCTCCGGATAATATTGGTTCAAACGTCAGCAGACTTATCAGGACGAATTTGTGGGGAGAGGATGTTGAACAGCAGCTGCGTGATATGAGTGTTTCGTTTTCAAGTGATATGGTTAAGATGATATTGGAGGATCTTAGCACAGACCCAGCAAAAGCATATATATTTTTCCTATGGATTGATGAGAGTGGGATGTTTAAGCATGATGAGCAAACTTATAACGCCATGGCTAGGGTGTTAGGAAGGGAAGATTGTATTGATAGATTTTGGAAAGTAGTAGATGAAATGAGGAGTCAAGGTTACAAAATGGAAATGGAGACATTTACCAAGGTGTTGGGACGATTTTGTAAAAGAAGAATGATTGAGGAAGCTGTAAATTTGTATGTCTTTGCAATGTCAGTAGGTGATAAGCCTTCGGAGGATTGTCTTACTTTTCTGTTAAAGAAAATAGCAGTAAGTGAGCAGTTTGATCTAGATCTATTCTCAAGGGCATTGAAGATATTTTCAGAGTCAGGTAATGTGTTGAAGGATTCAATGGTTTTTGCAGTTCTCAGGTCTCTGTCTAGTGTTGGTAGAACTGGAGAGTTCAATGAGGTTTTAAATGTAATGAAAGAGTATGGATATGTATGTAGTGGTGGTTTGAAGAGAAAGGTTGCATATCGACTCAGTAGGACAGGAAAAAGTGATGAAGCTAATGATTTCATGAATAACTTAGAAGCTTCTGGATGTAATCCAGACAACAAGACCTGGGCATCTTTGATTGAAGGGCATTGTGCTGCTGGAGATCTTGACAAGGCTTCTGATTGTATCCACAAAATGGTTGAGAAAGGAGGGGTCCCTTCTGCTGCATATGCTTTGGATTTAATAGTAAATGGTTACTGTCAAAAGAAACATGAAACTGATGCTAGCCATCTTCTCTTCGATCTTGTTGATAAAAGCCAGCTAAAACCACGACATTCTACTTACAAAACATTGATAAACAAGCTACTGCTCTGTGGGGAATTCAAAGATGCTTTAAAATTGTTGGGGATGATGAGAAATCATGAATTCCCACCATTTATTGAACCATTTATCTCATATGTATCCAAGTCTGGAACAGCTGATGATGGCCTTGAATTCCTAAAGGGCATGACATCGAAGAAATTTCCTTCAACGACTGTAGTTCTCCAATTATTTGAAGCATTTTTCCAAGCTGGAAGGCACGGAGATGCTCAAGACCTTCTTTTAAAATGCCCCGGTTACATTCGTAACCATGCTGATGTTTTGGATCTTTTTTGTTCCATGAAGCCTGTAGAAGCTGCTGCTTCCCCAAATCTGACTTCT

Protein sequence

MRFSWRLLRLRPHLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISDFYFTSIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDLVLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARVLGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS
Homology
[Close]
BLAST of CSPI05G29730 vs. ExPASy Swiss-Prot
Match: Q9M891 (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 1.3e-173
Identity = 330/658 (50.15%), Postives = 446/658 (67.78%), Query Frame = 0 

Query: 1   MRFSWRLLRLRPHLR----ISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60
           MR+ WR L  R +        S+ S FQV+S+    S RS SS      LH         
Sbjct: 1   MRYQWRSLLFRSYRSSPRPFLSHHSRFQVISN----STRSFSSF-----LHERFGVQQRQ 60

Query: 61  FYFTSIVRPIYGTL-RTFSSEPAAEQE-SDHAVIVDILSKSRDVDEIRKGLESNGVVISH 120
             F ++  P+  ++ R FSSE A E++     V++D+ S+    DEI K L+SN VVISH
Sbjct: 61  CLF-ALRSPLASSVSRRFSSESAIEEKLPAETVVIDVFSRLNGKDEITKELDSNDVVISH 120

Query: 121 DLVLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDM 180
           +L L VL +LES+PD A RFF W    Y +KLSSKS+N ML I GVNGLV +FW L  DM
Sbjct: 121 ELALRVLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDM 180

Query: 181 KKKGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLW 240
           KKKG+G+S  VRD+V +KF KDGL+++ E+L+++FASGS D S D + + V +++   +W
Sbjct: 181 KKKGHGVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSVDKVCNRVCKIVMKEVW 240

Query: 241 GEDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARV 300
           G DVE+QLRD+ + F SD+VKM+LE L  DP KA +FF WIDESG FKHDE+TYNAMARV
Sbjct: 241 GADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARV 300

Query: 301 LGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAM--SVGDK 360
           LG+E  +DRF  +++E+RS GY+MEMET+ +V  RFC+ +MI+EAV L+ FAM  S+ + 
Sbjct: 301 LGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNT 360

Query: 361 PSEDCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFN 420
           P+  C + LLKKI  +++ D+DLF+R LK ++ +GNV+ D M+  VL+SL SV R G+ N
Sbjct: 361 PTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSN 420

Query: 421 EVLNVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGH 480
           EVL  M E GYV SG L+  +A  LSR GK DEAN+ +N +EASG + D+K  ASL+EGH
Sbjct: 421 EVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGH 480

Query: 481 CAAGDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKP 540
           C A DL++AS+C  KM+ K GV  A YA + +V  YC      D   L  +LV ++QLKP
Sbjct: 481 CDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKP 540

Query: 541 RHSTYKTLINKLLL-----CGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLE 600
            HSTYK ++  LL+      G F++AL LL MMRNH FPPF++PF+ Y+S SGT+ +   
Sbjct: 541 WHSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFA 600

Query: 601 FLKGMTSKKFPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKP 646
           FLK +TSKKFPS ++VL++FEA  ++ RH +AQDLL   P YIR +A+VL+LF +MKP
Sbjct: 601 FLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNTMKP 648

[Close]
BLAST of CSPI05G29730 vs. ExPASy Swiss-Prot
Match: Q8LPF1 (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 4.7e-168
Identity = 325/678 (47.94%), Postives = 445/678 (65.63%), Query Frame = 0 

Query: 1   MRF-SWRLLRLRPHLR------------ISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLH 60
           MR+  WRL+ LR + R             S +S  F    HP + +L+    L P     
Sbjct: 1   MRYQQWRLMLLRSYHRSHLPYLSPCSQVTSISSRSFSSFIHPGIGALQQSEQLCPLR--- 60

Query: 61  HTPSPPISDFYFTSIVRPIYGTLRTFSSEPAAEQESD-HAVIVDILSKSRDVDEIRKGLE 120
              SP       TS    +    R+FSSEPA E++S   A ++DI S+    DEIRK LE
Sbjct: 61  ---SP------MTSSGNLVKSVGRSFSSEPAVEEKSSAEATVIDIFSRLSGEDEIRKELE 120

Query: 121 SNGVVISHDLVLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKK 180
           S+GVVIS DL L+VL +LESNPD A  FF W+     E+LSSK++N+ML ILG NGLV +
Sbjct: 121 SSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDE 180

Query: 181 FWDLNCDMKKKGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVS 240
           FW L   MKKKG+G+S  VRDKV +KF KDGL+S+  +LR +F S   D S +N+   V 
Sbjct: 181 FWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSAENVCDRVC 240

Query: 241 RLIRTNLWGEDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQ 300
           +++    WG+DVE+++RD++V F SD+VKMI+E L  +P KA +FF WIDES +FKHDE+
Sbjct: 241 KIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEK 300

Query: 301 TYNAMARVLGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFA 360
           TYNAMARVLG+E  +DRF  +V EMRS GY++E+ET+ +V  RFC+ ++I+EAV+L+  A
Sbjct: 301 TYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIA 360

Query: 361 M---SVGDKPSEDCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLS 420
           M   S  + P+  C   LLKKI  ++  D+DLFSRA+K+++++GN L DS++ +VL+SL 
Sbjct: 361 MAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLR 420

Query: 421 SVGRTGEFNEVLNVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNK 480
           SV R  + NE+L  MK  GYV SG ++  +A  LSR GK DEA++F++ +E+SG N D+K
Sbjct: 421 SVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDK 480

Query: 481 TWASLIEGHCAAGDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFD 540
             ASL+EG+C +G+LD+A  C  KMV   GV  A Y+ + +V  YC K    DA  LL  
Sbjct: 481 AMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSA 540

Query: 541 LVDKSQLKPRHSTYKTLINKLLL-----CGEFKDALKLLGMMRNHEFPPFIEPFISYVSK 600
            V K+QLKPRHSTYK+L+  LL       G F++AL LL +M++H FPPFI+PF+SY S 
Sbjct: 541 QVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSS 600

Query: 601 SGTADDGLEFLKGMTSKKFPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLD 657
           +G + + L FLK MTS  FP  +VVL++FE   ++ RH +AQDLL  CP YIRN+ DVL+
Sbjct: 601 TGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLE 660

[Close]
BLAST of CSPI05G29730 vs. ExPASy Swiss-Prot
Match: Q9STK5 (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.0e-89
Identity = 188/573 (32.81%), Postives = 309/573 (53.93%), Query Frame = 0 

Query: 71  RTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDLVLEVLGQLESNPDD 130
           RTFSS+P +        ++ ++ ++    E+ +GL    + ++H+  + VL +LE  P+ 
Sbjct: 54  RTFSSKPDS--------MLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEK 113

Query: 131 AIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYGMSKTVRDKVL 190
           A  F DWV  D G   S+  +++ML IL     +K+FW    +MK+ G+ + +     + 
Sbjct: 114 AYYFLDWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIY 173

Query: 191 EKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQQLRDMSVSFS 250
            +  K+  K++A  +   +     + +   +   VS ++    W  +VE++L++M +  S
Sbjct: 174 GELSKEKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLS 233

Query: 251 SDMVKMILEDLSTDPAKAYIFFLWIDESGM---FKHDEQTYNAMARVLGREDCIDRFWKV 310
            + V  +L++L   P KA  FF W+   G    ++H   TYNA  RVL R + +  FW V
Sbjct: 234 DNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSV 293

Query: 311 VDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTFLLKKIAV 370
           VDEM++ GY M+++T+ KV  +F K RM+ E V LY + M    KPS    + LL+ ++ 
Sbjct: 294 VDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSG 353

Query: 371 SEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKEYGYVCSG 430
           S   DLDL  R  + +  +G  L  ++   + RSL+SVGR  E  E+   M+  GY    
Sbjct: 354 SPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDN 413

Query: 431 GLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDKASDCIHK 490
               ++ + L +  + +EA   ++ +EA GC PD KTW  LI+GHC   +LDKA  C   
Sbjct: 414 ITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFAN 473

Query: 491 MVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTLINKLLLC 550
           M+EK G    +  LD++++G+        AS  L ++V  + +KP  STYK LI+KLL  
Sbjct: 474 MLEK-GFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKI 533

Query: 551 GEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPSTTVVLQLF 610
            + ++AL LL MM+   +P + E F  Y++K GT +D  +FL  ++SK  PS      + 
Sbjct: 534 KKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVI 593

Query: 611 EAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLF 641
           EAF++ GR  DA++LL  CP + + H  + +LF
Sbjct: 594 EAFYREGRLTDAKNLLFICPHHFKTHPKISELF 617

[Close]
BLAST of CSPI05G29730 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.2e-16
Identity = 95/451 (21.06%), Postives = 192/451 (42.57%), Query Frame = 0 

Query: 123 QLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYGMS 182
           +L  N   ++  F W     G + S   + +++G LG NG  K    L   MK +G    
Sbjct: 86  ELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFK 145

Query: 183 KTVRDKVLEKFDKDGLKSEAEKL----RDMFASGSTDKS----PDNIGSNVSRLIRTNLW 242
           +++   ++  +DK G   +  +L    R++++   T KS     + + S     +  N++
Sbjct: 146 ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 205

Query: 243 GEDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKH----DEQTYNA 302
            + + +++     +F   ++K        D A + +         M KH    +   Y  
Sbjct: 206 YDMLSRKIPPTLFTFGV-VMKAFCAVNEIDSALSLL-------RDMTKHGCVPNSVIYQT 265

Query: 303 MARVLGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVG 362
           +   L + + ++   ++++EM   G   + ETF  V+   CK   I EA  +    +  G
Sbjct: 266 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 325

Query: 363 DKPSEDCLTFLLKKIAVSEQFDL--DLFSRALKIFSESGNVLKDSMVF-AVLRSLSSVGR 422
             P +    +L+  +    + D   DLF R  K          + ++F  ++    + GR
Sbjct: 326 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---------PEIVIFNTLIHGFVTHGR 385

Query: 423 TGEFNEVL-NVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWA 482
             +   VL +++  YG V        + Y   + G    A + ++++   GC P+  ++ 
Sbjct: 386 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 445

Query: 483 SLIEGHCAAGDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVD 542
            L++G C  G +D+A + +++M   G  P+     + +++ +C K+H    +  +F  + 
Sbjct: 446 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV-GFNCLISAFC-KEHRIPEAVEIFREMP 505

Query: 543 KSQLKPRHSTYKTLINKLLLCGEFKDALKLL 558
           +   KP   T+ +LI+ L    E K AL LL
Sbjct: 506 RKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517

[Close]
BLAST of CSPI05G29730 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.9e-16
Identity = 76/283 (26.86%), Postives = 126/283 (44.52%), Query Frame = 0 

Query: 288 YNAMARVLGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAM 347
           YN + + L  +  I    ++ +EM  +G   E++TF  ++   CK   + +A  L    +
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453

Query: 348 SVGDKPSEDCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGR 407
           S G  P  D  TF +     S Q  ++     L +  ++G    D  V+     L+ + +
Sbjct: 454 SKGYFP--DIFTFNILIHGYSTQLKMENALEILDVMLDNG---VDPDVYTYNSLLNGLCK 513

Query: 408 TGEFNEVLNVMK---EYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKT 467
           T +F +V+   K   E G   +      +   L R  K DEA   +  ++    NPD  T
Sbjct: 514 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 573

Query: 468 WASLIEGHCAAGDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDL 527
           + +LI+G C  GDLD A     KM E   V S+    ++I++ + +K + T A  L  ++
Sbjct: 574 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 633

Query: 528 VDKSQLKPRHSTYKTLINKLLLCGEFKDALK-LLGMMRNHEFP 567
           VD+  L P   TY+ +++     G      K LL MM N   P
Sbjct: 634 VDRC-LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670

[Close]
BLAST of CSPI05G29730 vs. ExPASy TrEMBL
Match: A0A0A0KSL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643230 PE=4 SV=1)

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 655/656 (99.85%), Postives = 655/656 (99.85%), Query Frame = 0 

Query: 1   MRFSWRLLRLRPHLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISDFYFT 60
           MRFSWRLLRLRPHLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISDFYFT
Sbjct: 1   MRFSWRLLRLRPHLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISDFYFT 60

Query: 61  SIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDLVLEV 120
           SIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDLVLEV
Sbjct: 61  SIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDLVLEV 120

Query: 121 LGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYG 180
           LGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYG
Sbjct: 121 LGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYG 180

Query: 181 MSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQ 240
           MSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQ
Sbjct: 181 MSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQ 240

Query: 241 QLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARVLGREDC 300
           QLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMA VLGREDC
Sbjct: 241 QLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMATVLGREDC 300

Query: 301 IDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTF 360
           IDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTF
Sbjct: 301 IDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTF 360

Query: 361 LLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKE 420
           LLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKE
Sbjct: 361 LLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKE 420

Query: 421 YGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDK 480
           YGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDK
Sbjct: 421 YGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDK 480

Query: 481 ASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTL 540
           ASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTL
Sbjct: 481 ASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTL 540

Query: 541 INKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPST 600
           INKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPST
Sbjct: 541 INKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPST 600

Query: 601 TVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS 657
           TVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS
Sbjct: 601 TVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS 656

[Close]
BLAST of CSPI05G29730 vs. ExPASy TrEMBL
Match: A0A5A7TD41 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002110 PE=4 SV=1)

HSP 1 Score: 1228.0 bits (3176), Expect = 0.0e+00
Identity = 613/660 (92.88%), Postives = 632/660 (95.76%), Query Frame = 0 

Query: 1   MRFSWRLLRLRP----HLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60
           MR+SWRLLRLRP    H RISSNSSHFQVLSHPNLQSLRSLSSLFPKHP+H TPSPPISD
Sbjct: 1   MRYSWRLLRLRPYFRSHFRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPVHDTPSPPISD 60

Query: 61  FYFTSIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDL 120
           F+FTSIV PIYGTLRTFSSEPAAEQESDHAVIVDI SKSRDVDEIRKGLESNGVVISHDL
Sbjct: 61  FHFTSIVGPIYGTLRTFSSEPAAEQESDHAVIVDIFSKSRDVDEIRKGLESNGVVISHDL 120

Query: 121 VLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKK 180
           VLEVLGQLESNPD AIRFFDWVSGDYGEKLSSKSFNLMLGILGVNG VK+FWDLNCDMKK
Sbjct: 121 VLEVLGQLESNPDGAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGFVKEFWDLNCDMKK 180

Query: 181 KGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGE 240
           KGYG+SKTVRDKVLEKFDKDGLKS+AEKLRD+FASGS DKSP+ IGS VSRL+R NLWGE
Sbjct: 181 KGYGISKTVRDKVLEKFDKDGLKSDAEKLRDVFASGSVDKSPEKIGSTVSRLVRKNLWGE 240

Query: 241 DVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARVLG 300
           DVEQQLRDMSVSFSSDMVKMILEDL TDPAKAYIFFLWI E+GMFKHDEQTYNAMARVLG
Sbjct: 241 DVEQQLRDMSVSFSSDMVKMILEDLKTDPAKAYIFFLWIGETGMFKHDEQTYNAMARVLG 300

Query: 301 REDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSED 360
           REDCIDRFWKVVDEM++QGYKMEMETF KVLGRFCKRRMIEEAVNLYVFAM+VG+KPSED
Sbjct: 301 REDCIDRFWKVVDEMKNQGYKMEMETFAKVLGRFCKRRMIEEAVNLYVFAMTVGNKPSED 360

Query: 361 CLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLN 420
           CLTFLLKKIAVSE FDLDLFSRALKIFSESGNVLKDSMVFAVL+SLSSVGRTGEFNEVLN
Sbjct: 361 CLTFLLKKIAVSEHFDLDLFSRALKIFSESGNVLKDSMVFAVLKSLSSVGRTGEFNEVLN 420

Query: 421 VMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480
           VM EYGYV SGGLKRK+AYRLSR GKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG
Sbjct: 421 VMIEYGYVFSGGLKRKIAYRLSRKGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480

Query: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHST 540
           DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYC+KK ETDASHLLFDLVDK+QLKPRHST
Sbjct: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCRKKRETDASHLLFDLVDKNQLKPRHST 540

Query: 541 YKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKK 600
           YKTLINKLLLCGEFKDALKLLG+MRNHEFPPFIEPFISYVSKSGTADD LEFLKGMTSKK
Sbjct: 541 YKTLINKLLLCGEFKDALKLLGLMRNHEFPPFIEPFISYVSKSGTADDALEFLKGMTSKK 600

Query: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS 657
           FPSTTVVLQLFEAFFQAGRHGDAQDLL  CP YIRNHADVLDLFCSMKPVEAAAS NL S
Sbjct: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLSNCPRYIRNHADVLDLFCSMKPVEAAASANLAS 660

[Close]
BLAST of CSPI05G29730 vs. ExPASy TrEMBL
Match: A0A1S3C9Q1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103498583 PE=4 SV=1)

HSP 1 Score: 1223.4 bits (3164), Expect = 0.0e+00
Identity = 612/660 (92.73%), Postives = 629/660 (95.30%), Query Frame = 0 

Query: 1   MRFSWRLLRLRP----HLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60
           MR+SWRLLRLRP    H RISSNSSH QVLSHPNLQSLRSLSSLFPKHP+H TPSPPISD
Sbjct: 1   MRYSWRLLRLRPHFRSHFRISSNSSHCQVLSHPNLQSLRSLSSLFPKHPVHDTPSPPISD 60

Query: 61  FYFTSIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDL 120
           F+FTSIV PIYGTLRTFSSEPAAEQESDHAVIVDI SKSRDVDEIRKGLESNGVVISHDL
Sbjct: 61  FHFTSIVGPIYGTLRTFSSEPAAEQESDHAVIVDIFSKSRDVDEIRKGLESNGVVISHDL 120

Query: 121 VLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKK 180
           VLEVLGQLESNPD AIRFFDWVSGDYGEKLSSKSFN MLGILGVNG VK+FWDLNCDMKK
Sbjct: 121 VLEVLGQLESNPDGAIRFFDWVSGDYGEKLSSKSFNSMLGILGVNGFVKEFWDLNCDMKK 180

Query: 181 KGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGE 240
           KGYG+SKTVRDKVLEKFDKDGLKS+AEKLRD+FASGS DKSP+ IGS VSRL+R NLWGE
Sbjct: 181 KGYGISKTVRDKVLEKFDKDGLKSDAEKLRDVFASGSVDKSPEKIGSTVSRLVRKNLWGE 240

Query: 241 DVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARVLG 300
           DVEQQLRDMSVSFSSDMVKMILEDL TDPAKAYIFFLWI ESGMFKHDEQTYNAMARVLG
Sbjct: 241 DVEQQLRDMSVSFSSDMVKMILEDLKTDPAKAYIFFLWIGESGMFKHDEQTYNAMARVLG 300

Query: 301 REDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSED 360
           REDCIDRFWKVVDEM+SQGYKMEMETF KVLGRFCKRRMIEEAVNLYVFAM+VG+KPSED
Sbjct: 301 REDCIDRFWKVVDEMKSQGYKMEMETFAKVLGRFCKRRMIEEAVNLYVFAMTVGNKPSED 360

Query: 361 CLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLN 420
           CLTFLLKKIAVSE FDLDLFSRALKIFSESGNVLKDSMVFAVL+SLSSVGRTGEFNEVLN
Sbjct: 361 CLTFLLKKIAVSEHFDLDLFSRALKIFSESGNVLKDSMVFAVLKSLSSVGRTGEFNEVLN 420

Query: 421 VMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480
           VM EYGYV SGGLKRK+AYRLSR GKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG
Sbjct: 421 VMIEYGYVFSGGLKRKIAYRLSRKGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480

Query: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHST 540
           DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYC+KK ETDASHLLFDLVDK+QLKPRHST
Sbjct: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCRKKRETDASHLLFDLVDKNQLKPRHST 540

Query: 541 YKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKK 600
           YKTLINKLLLCGEFKDALKLLG+MRNHEFPPFIEPFISYVSKSGTADD LEFLKGMTSKK
Sbjct: 541 YKTLINKLLLCGEFKDALKLLGLMRNHEFPPFIEPFISYVSKSGTADDALEFLKGMTSKK 600

Query: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS 657
           FPSTTVVLQLFEAFFQAGRHGDAQDLL  CP YIRNHADVLDLFCSMKPVEAA S NL S
Sbjct: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLSNCPRYIRNHADVLDLFCSMKPVEAAVSANLAS 660

[Close]
BLAST of CSPI05G29730 vs. ExPASy TrEMBL
Match: A0A6J1JYT4 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111489108 PE=4 SV=1)

HSP 1 Score: 1074.7 bits (2778), Expect = 2.4e-310
Identity = 543/661 (82.15%), Postives = 589/661 (89.11%), Query Frame = 0 

Query: 1   MRFSWRLLRLRPH----LRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60
           MR+SWRLLRLR H    LR+SSN+SHFQV S PNLQ++R LSSL PKHP+H T SPPISD
Sbjct: 1   MRYSWRLLRLRAHFRSQLRVSSNASHFQVHSDPNLQTIRFLSSLLPKHPVHGTASPPISD 60

Query: 61  FYFTSIVRPIYGTLRTFSSEPAAEQ-ESDHAVIVDILSKSRDVDEIRKGLESNGVVISHD 120
             FTSIV+  YGT RTFSSE   EQ ES+HAV+ DI SKSRDVDEIRK LE NG+VISHD
Sbjct: 61  SQFTSIVKYRYGTPRTFSSESVIEQKESNHAVVFDIFSKSRDVDEIRKDLELNGIVISHD 120

Query: 121 LVLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMK 180
           LVLEVLG+LESNPD AIRFF+WVSG+YGEKLSSKS+NLMLGILGVN  VK+FWDLNCDMK
Sbjct: 121 LVLEVLGKLESNPDSAIRFFNWVSGEYGEKLSSKSYNLMLGILGVNDHVKEFWDLNCDMK 180

Query: 181 KKGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWG 240
           KKGYG+SKTVRDKVLEKF+KDGL+SEAEKLRD+FASGSTDKSP+ IGS V +L+R N+WG
Sbjct: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSTDKSPEKIGSIVCKLVRNNVWG 240

Query: 241 EDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARVL 300
           +DVEQQLRDM+VSFSSDMVKMILE+L TDPAKA+IFF WI+ESGMFKHDEQTYNAMARVL
Sbjct: 241 DDVEQQLRDMNVSFSSDMVKMILENLCTDPAKAFIFFRWIEESGMFKHDEQTYNAMARVL 300

Query: 301 GREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSE 360
           GREDCIDRFWKVVDEMRS GY+ME+ETF KVLGRFCKRRMIEEAVNLYVFAM+ G+KPS 
Sbjct: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSV 360

Query: 361 DCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVL 420
           DCLTFLLKKIAVS+  DLDLFSR LK+F+E+GNVL DSMVFAVL+SLS+VGR GE+ EVL
Sbjct: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKVFTETGNVLTDSMVFAVLKSLSAVGRIGEYTEVL 420

Query: 421 NVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAA 480
           NVMKEYGY  SG LKRKVAYRLSRTGKSDEANDFMN LEASGCNPDNKTWASLIEG CAA
Sbjct: 421 NVMKEYGYEFSGSLKRKVAYRLSRTGKSDEANDFMNGLEASGCNPDNKTWASLIEGLCAA 480

Query: 481 GDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHS 540
           GDL  ASDCIHKMV+KG V SA YALDLIVN YCQKK ETDASHLL +LVD  QLKPRHS
Sbjct: 481 GDLAMASDCIHKMVDKGDVSSAGYALDLIVNAYCQKKRETDASHLLSELVDGKQLKPRHS 540

Query: 541 TYKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSK 600
           TYK LINKLL  GEFK+ALKLLGMMRNHEFPPFIEPFISYVSKSGTADD + FLK MTSK
Sbjct: 541 TYKALINKLLQRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKAMTSK 600

Query: 601 KFPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLT 657
           +FPST+V L LFEAFFQAGRHGDAQD L KCP  IRNHADVL+LF SMKPVEAAASPNL 
Sbjct: 601 RFPSTSVFLHLFEAFFQAGRHGDAQDFLSKCPSDIRNHADVLNLFYSMKPVEAAASPNLA 660

[Close]
BLAST of CSPI05G29730 vs. ExPASy TrEMBL
Match: A0A6J1FJW5 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111444701 PE=4 SV=1)

HSP 1 Score: 1064.7 bits (2752), Expect = 1.6e-307
Identity = 542/661 (82.00%), Postives = 583/661 (88.20%), Query Frame = 0 

Query: 1   MRFSWRLLRLRPH----LRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60
           MR+SWRLLRLR H    LRISSN+SHFQV S PNLQSLR LSSL PKHP+H T SPPISD
Sbjct: 1   MRYSWRLLRLRAHFRSQLRISSNASHFQVHSDPNLQSLRFLSSLLPKHPVHGTASPPISD 60

Query: 61  FYFTSIVRPIYGTLRTFSSEPAAEQ-ESDHAVIVDILSKSRDVDEIRKGLESNGVVISHD 120
              TSIV+  YGT RTFSSE   EQ ESDHAV+ DI SKSRDVDEIRK LESNG+VISHD
Sbjct: 61  SQCTSIVKSRYGTPRTFSSESVIEQKESDHAVVFDIFSKSRDVDEIRKDLESNGIVISHD 120

Query: 121 LVLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMK 180
           LVLEVLG+LESNPD AIRFF+WVSGDYGEKLSSKS+NLMLGILGVN  V +FWDLNCDMK
Sbjct: 121 LVLEVLGKLESNPDSAIRFFNWVSGDYGEKLSSKSYNLMLGILGVNDHVGEFWDLNCDMK 180

Query: 181 KKGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWG 240
           KKGYG+SKTVRDKVLEKF+KDGL+SEAEKLRD+FASGSTDKSP+ IGS V +L+R N+WG
Sbjct: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSTDKSPEKIGSIVCKLVRNNVWG 240

Query: 241 EDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARVL 300
           +DVEQQL DM+VSFSSDMVKMILE+L TDPAKA+IFF WI ESGMFKHDEQTYNAMARVL
Sbjct: 241 DDVEQQLCDMNVSFSSDMVKMILENLCTDPAKAFIFFRWIGESGMFKHDEQTYNAMARVL 300

Query: 301 GREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSE 360
           GREDCIDRFWKVVDEMRS GY+M +ETF KVLGRFCKRRMIEEAVNLYVFAM+ G+KPS 
Sbjct: 301 GREDCIDRFWKVVDEMRSHGYEMGVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSV 360

Query: 361 DCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVL 420
           DCLTFLLKKIAVS+  DLDLFSR LK+F+E+GNVL DSMV AVL+SLS+VGR GE+ EVL
Sbjct: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKVFTETGNVLTDSMVSAVLKSLSTVGRIGEYTEVL 420

Query: 421 NVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAA 480
           NVMKEYGY  SG LKRKVAYRLSRTGKSDEANDFMN LEASGCNPDNKTWASLIEG CAA
Sbjct: 421 NVMKEYGYEFSGSLKRKVAYRLSRTGKSDEANDFMNGLEASGCNPDNKTWASLIEGLCAA 480

Query: 481 GDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHS 540
           GDL  ASDCIHKMVEKG V +A YALDLI+N YCQK+ ETDASHLL DLVD  QLKP HS
Sbjct: 481 GDLAMASDCIHKMVEKGDVSNAGYALDLIINAYCQKRRETDASHLLSDLVDGKQLKPWHS 540

Query: 541 TYKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSK 600
           TYK LINKLL  GEFK+ALKLLGMMRNHEFPPFIEPFISYVSKSGTADD + FLK MTSK
Sbjct: 541 TYKALINKLLQRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKAMTSK 600

Query: 601 KFPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLT 657
           +FPST+V L LFEAFFQAGRHGDAQD L KCP  IRNHADVL+LF SMKPVEAAASPNL 
Sbjct: 601 RFPSTSVFLHLFEAFFQAGRHGDAQDFLSKCPSDIRNHADVLNLFYSMKPVEAAASPNLA 660

[Close]
BLAST of CSPI05G29730 vs. NCBI nr
Match: XP_004141599.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial [Cucumis sativus] >KGN52543.1 hypothetical protein Csa_007944 [Cucumis sativus])

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 655/656 (99.85%), Postives = 655/656 (99.85%), Query Frame = 0 

Query: 1   MRFSWRLLRLRPHLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISDFYFT 60
           MRFSWRLLRLRPHLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISDFYFT
Sbjct: 1   MRFSWRLLRLRPHLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISDFYFT 60

Query: 61  SIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDLVLEV 120
           SIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDLVLEV
Sbjct: 61  SIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDLVLEV 120

Query: 121 LGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYG 180
           LGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYG
Sbjct: 121 LGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYG 180

Query: 181 MSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQ 240
           MSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQ
Sbjct: 181 MSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQ 240

Query: 241 QLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARVLGREDC 300
           QLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMA VLGREDC
Sbjct: 241 QLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMATVLGREDC 300

Query: 301 IDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTF 360
           IDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTF
Sbjct: 301 IDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTF 360

Query: 361 LLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKE 420
           LLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKE
Sbjct: 361 LLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKE 420

Query: 421 YGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDK 480
           YGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDK
Sbjct: 421 YGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDK 480

Query: 481 ASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTL 540
           ASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTL
Sbjct: 481 ASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTL 540

Query: 541 INKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPST 600
           INKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPST
Sbjct: 541 INKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPST 600

Query: 601 TVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS 657
           TVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS
Sbjct: 601 TVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS 656

[Close]
BLAST of CSPI05G29730 vs. NCBI nr
Match: KAA0039407.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00594.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1228.0 bits (3176), Expect = 0.0e+00
Identity = 613/660 (92.88%), Postives = 632/660 (95.76%), Query Frame = 0 

Query: 1   MRFSWRLLRLRP----HLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60
           MR+SWRLLRLRP    H RISSNSSHFQVLSHPNLQSLRSLSSLFPKHP+H TPSPPISD
Sbjct: 1   MRYSWRLLRLRPYFRSHFRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPVHDTPSPPISD 60

Query: 61  FYFTSIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDL 120
           F+FTSIV PIYGTLRTFSSEPAAEQESDHAVIVDI SKSRDVDEIRKGLESNGVVISHDL
Sbjct: 61  FHFTSIVGPIYGTLRTFSSEPAAEQESDHAVIVDIFSKSRDVDEIRKGLESNGVVISHDL 120

Query: 121 VLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKK 180
           VLEVLGQLESNPD AIRFFDWVSGDYGEKLSSKSFNLMLGILGVNG VK+FWDLNCDMKK
Sbjct: 121 VLEVLGQLESNPDGAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGFVKEFWDLNCDMKK 180

Query: 181 KGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGE 240
           KGYG+SKTVRDKVLEKFDKDGLKS+AEKLRD+FASGS DKSP+ IGS VSRL+R NLWGE
Sbjct: 181 KGYGISKTVRDKVLEKFDKDGLKSDAEKLRDVFASGSVDKSPEKIGSTVSRLVRKNLWGE 240

Query: 241 DVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARVLG 300
           DVEQQLRDMSVSFSSDMVKMILEDL TDPAKAYIFFLWI E+GMFKHDEQTYNAMARVLG
Sbjct: 241 DVEQQLRDMSVSFSSDMVKMILEDLKTDPAKAYIFFLWIGETGMFKHDEQTYNAMARVLG 300

Query: 301 REDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSED 360
           REDCIDRFWKVVDEM++QGYKMEMETF KVLGRFCKRRMIEEAVNLYVFAM+VG+KPSED
Sbjct: 301 REDCIDRFWKVVDEMKNQGYKMEMETFAKVLGRFCKRRMIEEAVNLYVFAMTVGNKPSED 360

Query: 361 CLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLN 420
           CLTFLLKKIAVSE FDLDLFSRALKIFSESGNVLKDSMVFAVL+SLSSVGRTGEFNEVLN
Sbjct: 361 CLTFLLKKIAVSEHFDLDLFSRALKIFSESGNVLKDSMVFAVLKSLSSVGRTGEFNEVLN 420

Query: 421 VMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480
           VM EYGYV SGGLKRK+AYRLSR GKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG
Sbjct: 421 VMIEYGYVFSGGLKRKIAYRLSRKGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480

Query: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHST 540
           DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYC+KK ETDASHLLFDLVDK+QLKPRHST
Sbjct: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCRKKRETDASHLLFDLVDKNQLKPRHST 540

Query: 541 YKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKK 600
           YKTLINKLLLCGEFKDALKLLG+MRNHEFPPFIEPFISYVSKSGTADD LEFLKGMTSKK
Sbjct: 541 YKTLINKLLLCGEFKDALKLLGLMRNHEFPPFIEPFISYVSKSGTADDALEFLKGMTSKK 600

Query: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS 657
           FPSTTVVLQLFEAFFQAGRHGDAQDLL  CP YIRNHADVLDLFCSMKPVEAAAS NL S
Sbjct: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLSNCPRYIRNHADVLDLFCSMKPVEAAASANLAS 660

[Close]
BLAST of CSPI05G29730 vs. NCBI nr
Match: XP_008459452.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1223.4 bits (3164), Expect = 0.0e+00
Identity = 612/660 (92.73%), Postives = 629/660 (95.30%), Query Frame = 0 

Query: 1   MRFSWRLLRLRP----HLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60
           MR+SWRLLRLRP    H RISSNSSH QVLSHPNLQSLRSLSSLFPKHP+H TPSPPISD
Sbjct: 1   MRYSWRLLRLRPHFRSHFRISSNSSHCQVLSHPNLQSLRSLSSLFPKHPVHDTPSPPISD 60

Query: 61  FYFTSIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDL 120
           F+FTSIV PIYGTLRTFSSEPAAEQESDHAVIVDI SKSRDVDEIRKGLESNGVVISHDL
Sbjct: 61  FHFTSIVGPIYGTLRTFSSEPAAEQESDHAVIVDIFSKSRDVDEIRKGLESNGVVISHDL 120

Query: 121 VLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKK 180
           VLEVLGQLESNPD AIRFFDWVSGDYGEKLSSKSFN MLGILGVNG VK+FWDLNCDMKK
Sbjct: 121 VLEVLGQLESNPDGAIRFFDWVSGDYGEKLSSKSFNSMLGILGVNGFVKEFWDLNCDMKK 180

Query: 181 KGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGE 240
           KGYG+SKTVRDKVLEKFDKDGLKS+AEKLRD+FASGS DKSP+ IGS VSRL+R NLWGE
Sbjct: 181 KGYGISKTVRDKVLEKFDKDGLKSDAEKLRDVFASGSVDKSPEKIGSTVSRLVRKNLWGE 240

Query: 241 DVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARVLG 300
           DVEQQLRDMSVSFSSDMVKMILEDL TDPAKAYIFFLWI ESGMFKHDEQTYNAMARVLG
Sbjct: 241 DVEQQLRDMSVSFSSDMVKMILEDLKTDPAKAYIFFLWIGESGMFKHDEQTYNAMARVLG 300

Query: 301 REDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSED 360
           REDCIDRFWKVVDEM+SQGYKMEMETF KVLGRFCKRRMIEEAVNLYVFAM+VG+KPSED
Sbjct: 301 REDCIDRFWKVVDEMKSQGYKMEMETFAKVLGRFCKRRMIEEAVNLYVFAMTVGNKPSED 360

Query: 361 CLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLN 420
           CLTFLLKKIAVSE FDLDLFSRALKIFSESGNVLKDSMVFAVL+SLSSVGRTGEFNEVLN
Sbjct: 361 CLTFLLKKIAVSEHFDLDLFSRALKIFSESGNVLKDSMVFAVLKSLSSVGRTGEFNEVLN 420

Query: 421 VMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480
           VM EYGYV SGGLKRK+AYRLSR GKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG
Sbjct: 421 VMIEYGYVFSGGLKRKIAYRLSRKGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480

Query: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHST 540
           DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYC+KK ETDASHLLFDLVDK+QLKPRHST
Sbjct: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCRKKRETDASHLLFDLVDKNQLKPRHST 540

Query: 541 YKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKK 600
           YKTLINKLLLCGEFKDALKLLG+MRNHEFPPFIEPFISYVSKSGTADD LEFLKGMTSKK
Sbjct: 541 YKTLINKLLLCGEFKDALKLLGLMRNHEFPPFIEPFISYVSKSGTADDALEFLKGMTSKK 600

Query: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS 657
           FPSTTVVLQLFEAFFQAGRHGDAQDLL  CP YIRNHADVLDLFCSMKPVEAA S NL S
Sbjct: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLSNCPRYIRNHADVLDLFCSMKPVEAAVSANLAS 660

[Close]
BLAST of CSPI05G29730 vs. NCBI nr
Match: XP_038890460.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 1126.7 bits (2913), Expect = 0.0e+00
Identity = 567/660 (85.91%), Postives = 601/660 (91.06%), Query Frame = 0 

Query: 1   MRFSWRLLRLRPH----LRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60
           MR SWRLLRLR H    LRISSNSSHFQVLSHPNLQSLRSLSSLFPKHP+HHT SPPISD
Sbjct: 1   MRHSWRLLRLRAHFRSQLRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPVHHTASPPISD 60

Query: 61  FYFTSIVRPIYGTLRTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDL 120
            +F SIV+PIYGT RTFSSEPAAEQESD  V+VDI SKSRDVDEIRKGLE NG VISH L
Sbjct: 61  SHFKSIVKPIYGTPRTFSSEPAAEQESDRTVVVDIFSKSRDVDEIRKGLELNGTVISHGL 120

Query: 121 VLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKK 180
           VLEVLG+LESNPD AIRFFDWVSGDYGEKLSSKS+NLMLGILGVNGLVK+FWDLNC+MKK
Sbjct: 121 VLEVLGKLESNPDCAIRFFDWVSGDYGEKLSSKSYNLMLGILGVNGLVKEFWDLNCNMKK 180

Query: 181 KGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGE 240
           KGYG+SKTVRDKVLEKF+KDGL+SEAEKLRD+FASGS D+SP+ IG  V RLIR N+WGE
Sbjct: 181 KGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSIDRSPEKIGLIVYRLIRKNVWGE 240

Query: 241 DVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARVLG 300
           DVEQQLRDMSVSFSSDMV+MILEDL T+P KA IFF WIDESGMFKHD+QTYNAMARVLG
Sbjct: 241 DVEQQLRDMSVSFSSDMVQMILEDLCTEPTKALIFFRWIDESGMFKHDKQTYNAMARVLG 300

Query: 301 REDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSED 360
           REDCIDRFWKV DEMRS GY+M++ETF KVLGRFCKRRMIEEAVNLYVFAM+ G+KPS D
Sbjct: 301 REDCIDRFWKVADEMRSHGYEMDVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSAD 360

Query: 361 CLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLN 420
           CLTFLLKKIAVS+  DLDLFSR LKIFSE+GNVL DSMVFAVL+SL+SVGR GEFNEV N
Sbjct: 361 CLTFLLKKIAVSKHLDLDLFSRTLKIFSETGNVLTDSMVFAVLKSLTSVGRIGEFNEVFN 420

Query: 421 VMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAG 480
           VMKEYGYV SGGLKRKVAYRLSRTGKSDEANDFMN+LEASGCNPDNKTWASLIEGHCAAG
Sbjct: 421 VMKEYGYVSSGGLKRKVAYRLSRTGKSDEANDFMNSLEASGCNPDNKTWASLIEGHCAAG 480

Query: 481 DLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHST 540
           DL KASDCIHKMVEKGGV SA YALDLIVNGYCQKK ETDASHLL +LVD+ QLKPRHST
Sbjct: 481 DLAKASDCIHKMVEKGGVSSAGYALDLIVNGYCQKKLETDASHLLVNLVDEKQLKPRHST 540

Query: 541 YKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKK 600
           YKTLINKLLL G+FK+ALKLLGMMRNHEFPPFIEPFISYVSK GTADD + FLKGMTSKK
Sbjct: 541 YKTLINKLLLRGKFKEALKLLGMMRNHEFPPFIEPFISYVSKFGTADDAIGFLKGMTSKK 600

Query: 601 FPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLTS 657
           FPST+VVL LFEAFFQAGRHGDAQD L KCPGYIRNHADVLDLF SMKPVEA     L S
Sbjct: 601 FPSTSVVLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLDLFYSMKPVEAPPPQKLAS 660

[Close]
BLAST of CSPI05G29730 vs. NCBI nr
Match: XP_022992918.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucurbita maxima] >XP_022992919.1 pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1074.7 bits (2778), Expect = 5.0e-310
Identity = 543/661 (82.15%), Postives = 589/661 (89.11%), Query Frame = 0 

Query: 1   MRFSWRLLRLRPH----LRISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60
           MR+SWRLLRLR H    LR+SSN+SHFQV S PNLQ++R LSSL PKHP+H T SPPISD
Sbjct: 1   MRYSWRLLRLRAHFRSQLRVSSNASHFQVHSDPNLQTIRFLSSLLPKHPVHGTASPPISD 60

Query: 61  FYFTSIVRPIYGTLRTFSSEPAAEQ-ESDHAVIVDILSKSRDVDEIRKGLESNGVVISHD 120
             FTSIV+  YGT RTFSSE   EQ ES+HAV+ DI SKSRDVDEIRK LE NG+VISHD
Sbjct: 61  SQFTSIVKYRYGTPRTFSSESVIEQKESNHAVVFDIFSKSRDVDEIRKDLELNGIVISHD 120

Query: 121 LVLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMK 180
           LVLEVLG+LESNPD AIRFF+WVSG+YGEKLSSKS+NLMLGILGVN  VK+FWDLNCDMK
Sbjct: 121 LVLEVLGKLESNPDSAIRFFNWVSGEYGEKLSSKSYNLMLGILGVNDHVKEFWDLNCDMK 180

Query: 181 KKGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWG 240
           KKGYG+SKTVRDKVLEKF+KDGL+SEAEKLRD+FASGSTDKSP+ IGS V +L+R N+WG
Sbjct: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSTDKSPEKIGSIVCKLVRNNVWG 240

Query: 241 EDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARVL 300
           +DVEQQLRDM+VSFSSDMVKMILE+L TDPAKA+IFF WI+ESGMFKHDEQTYNAMARVL
Sbjct: 241 DDVEQQLRDMNVSFSSDMVKMILENLCTDPAKAFIFFRWIEESGMFKHDEQTYNAMARVL 300

Query: 301 GREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSE 360
           GREDCIDRFWKVVDEMRS GY+ME+ETF KVLGRFCKRRMIEEAVNLYVFAM+ G+KPS 
Sbjct: 301 GREDCIDRFWKVVDEMRSHGYEMEVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSV 360

Query: 361 DCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVL 420
           DCLTFLLKKIAVS+  DLDLFSR LK+F+E+GNVL DSMVFAVL+SLS+VGR GE+ EVL
Sbjct: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKVFTETGNVLTDSMVFAVLKSLSAVGRIGEYTEVL 420

Query: 421 NVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAA 480
           NVMKEYGY  SG LKRKVAYRLSRTGKSDEANDFMN LEASGCNPDNKTWASLIEG CAA
Sbjct: 421 NVMKEYGYEFSGSLKRKVAYRLSRTGKSDEANDFMNGLEASGCNPDNKTWASLIEGLCAA 480

Query: 481 GDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHS 540
           GDL  ASDCIHKMV+KG V SA YALDLIVN YCQKK ETDASHLL +LVD  QLKPRHS
Sbjct: 481 GDLAMASDCIHKMVDKGDVSSAGYALDLIVNAYCQKKRETDASHLLSELVDGKQLKPRHS 540

Query: 541 TYKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSK 600
           TYK LINKLL  GEFK+ALKLLGMMRNHEFPPFIEPFISYVSKSGTADD + FLK MTSK
Sbjct: 541 TYKALINKLLQRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKAMTSK 600

Query: 601 KFPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVEAAASPNLT 657
           +FPST+V L LFEAFFQAGRHGDAQD L KCP  IRNHADVL+LF SMKPVEAAASPNL 
Sbjct: 601 RFPSTSVFLHLFEAFFQAGRHGDAQDFLSKCPSDIRNHADVLNLFYSMKPVEAAASPNLA 660

[Close]
BLAST of CSPI05G29730 vs. TAIR 10
Match: AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 611.3 bits (1575), Expect = 9.1e-175
Identity = 330/658 (50.15%), Postives = 446/658 (67.78%), Query Frame = 0 

Query: 1   MRFSWRLLRLRPHLR----ISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLHHTPSPPISD 60
           MR+ WR L  R +        S+ S FQV+S+    S RS SS      LH         
Sbjct: 1   MRYQWRSLLFRSYRSSPRPFLSHHSRFQVISN----STRSFSSF-----LHERFGVQQRQ 60

Query: 61  FYFTSIVRPIYGTL-RTFSSEPAAEQE-SDHAVIVDILSKSRDVDEIRKGLESNGVVISH 120
             F ++  P+  ++ R FSSE A E++     V++D+ S+    DEI K L+SN VVISH
Sbjct: 61  CLF-ALRSPLASSVSRRFSSESAIEEKLPAETVVIDVFSRLNGKDEITKELDSNDVVISH 120

Query: 121 DLVLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDM 180
           +L L VL +LES+PD A RFF W    Y +KLSSKS+N ML I GVNGLV +FW L  DM
Sbjct: 121 ELALRVLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDM 180

Query: 181 KKKGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLW 240
           KKKG+G+S  VRD+V +KF KDGL+++ E+L+++FASGS D S D + + V +++   +W
Sbjct: 181 KKKGHGVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSVDKVCNRVCKIVMKEVW 240

Query: 241 GEDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMARV 300
           G DVE+QLRD+ + F SD+VKM+LE L  DP KA +FF WIDESG FKHDE+TYNAMARV
Sbjct: 241 GADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARV 300

Query: 301 LGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAM--SVGDK 360
           LG+E  +DRF  +++E+RS GY+MEMET+ +V  RFC+ +MI+EAV L+ FAM  S+ + 
Sbjct: 301 LGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNT 360

Query: 361 PSEDCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFN 420
           P+  C + LLKKI  +++ D+DLF+R LK ++ +GNV+ D M+  VL+SL SV R G+ N
Sbjct: 361 PTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSN 420

Query: 421 EVLNVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGH 480
           EVL  M E GYV SG L+  +A  LSR GK DEAN+ +N +EASG + D+K  ASL+EGH
Sbjct: 421 EVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGH 480

Query: 481 CAAGDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKP 540
           C A DL++AS+C  KM+ K GV  A YA + +V  YC      D   L  +LV ++QLKP
Sbjct: 481 CDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKP 540

Query: 541 RHSTYKTLINKLLL-----CGEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLE 600
            HSTYK ++  LL+      G F++AL LL MMRNH FPPF++PF+ Y+S SGT+ +   
Sbjct: 541 WHSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFA 600

Query: 601 FLKGMTSKKFPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKP 646
           FLK +TSKKFPS ++VL++FEA  ++ RH +AQDLL   P YIR +A+VL+LF +MKP
Sbjct: 601 FLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNTMKP 648

[Close]
BLAST of CSPI05G29730 vs. TAIR 10
Match: AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 592.8 bits (1527), Expect = 3.3e-169
Identity = 325/678 (47.94%), Postives = 445/678 (65.63%), Query Frame = 0 

Query: 1   MRF-SWRLLRLRPHLR------------ISSNSSHFQVLSHPNLQSLRSLSSLFPKHPLH 60
           MR+  WRL+ LR + R             S +S  F    HP + +L+    L P     
Sbjct: 1   MRYQQWRLMLLRSYHRSHLPYLSPCSQVTSISSRSFSSFIHPGIGALQQSEQLCPLR--- 60

Query: 61  HTPSPPISDFYFTSIVRPIYGTLRTFSSEPAAEQESD-HAVIVDILSKSRDVDEIRKGLE 120
              SP       TS    +    R+FSSEPA E++S   A ++DI S+    DEIRK LE
Sbjct: 61  ---SP------MTSSGNLVKSVGRSFSSEPAVEEKSSAEATVIDIFSRLSGEDEIRKELE 120

Query: 121 SNGVVISHDLVLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKK 180
           S+GVVIS DL L+VL +LESNPD A  FF W+     E+LSSK++N+ML ILG NGLV +
Sbjct: 121 SSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDE 180

Query: 181 FWDLNCDMKKKGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVS 240
           FW L   MKKKG+G+S  VRDKV +KF KDGL+S+  +LR +F S   D S +N+   V 
Sbjct: 181 FWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSAENVCDRVC 240

Query: 241 RLIRTNLWGEDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQ 300
           +++    WG+DVE+++RD++V F SD+VKMI+E L  +P KA +FF WIDES +FKHDE+
Sbjct: 241 KIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEK 300

Query: 301 TYNAMARVLGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFA 360
           TYNAMARVLG+E  +DRF  +V EMRS GY++E+ET+ +V  RFC+ ++I+EAV+L+  A
Sbjct: 301 TYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIA 360

Query: 361 M---SVGDKPSEDCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLS 420
           M   S  + P+  C   LLKKI  ++  D+DLFSRA+K+++++GN L DS++ +VL+SL 
Sbjct: 361 MAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLR 420

Query: 421 SVGRTGEFNEVLNVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNK 480
           SV R  + NE+L  MK  GYV SG ++  +A  LSR GK DEA++F++ +E+SG N D+K
Sbjct: 421 SVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDK 480

Query: 481 TWASLIEGHCAAGDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFD 540
             ASL+EG+C +G+LD+A  C  KMV   GV  A Y+ + +V  YC K    DA  LL  
Sbjct: 481 AMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSA 540

Query: 541 LVDKSQLKPRHSTYKTLINKLLL-----CGEFKDALKLLGMMRNHEFPPFIEPFISYVSK 600
            V K+QLKPRHSTYK+L+  LL       G F++AL LL +M++H FPPFI+PF+SY S 
Sbjct: 541 QVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSS 600

Query: 601 SGTADDGLEFLKGMTSKKFPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVLD 657
           +G + + L FLK MTS  FP  +VVL++FE   ++ RH +AQDLL  CP YIRN+ DVL+
Sbjct: 601 TGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLE 660

[Close]
BLAST of CSPI05G29730 vs. TAIR 10
Match: AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 331.6 bits (849), Expect = 1.4e-90
Identity = 188/573 (32.81%), Postives = 309/573 (53.93%), Query Frame = 0 

Query: 71  RTFSSEPAAEQESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDLVLEVLGQLESNPDD 130
           RTFSS+P +        ++ ++ ++    E+ +GL    + ++H+  + VL +LE  P+ 
Sbjct: 54  RTFSSKPDS--------MLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEK 113

Query: 131 AIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYGMSKTVRDKVL 190
           A  F DWV  D G   S+  +++ML IL     +K+FW    +MK+ G+ + +     + 
Sbjct: 114 AYYFLDWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIY 173

Query: 191 EKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQQLRDMSVSFS 250
            +  K+  K++A  +   +     + +   +   VS ++    W  +VE++L++M +  S
Sbjct: 174 GELSKEKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLS 233

Query: 251 SDMVKMILEDLSTDPAKAYIFFLWIDESGM---FKHDEQTYNAMARVLGREDCIDRFWKV 310
            + V  +L++L   P KA  FF W+   G    ++H   TYNA  RVL R + +  FW V
Sbjct: 234 DNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSV 293

Query: 311 VDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTFLLKKIAV 370
           VDEM++ GY M+++T+ KV  +F K RM+ E V LY + M    KPS    + LL+ ++ 
Sbjct: 294 VDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSG 353

Query: 371 SEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKEYGYVCSG 430
           S   DLDL  R  + +  +G  L  ++   + RSL+SVGR  E  E+   M+  GY    
Sbjct: 354 SPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDN 413

Query: 431 GLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDKASDCIHK 490
               ++ + L +  + +EA   ++ +EA GC PD KTW  LI+GHC   +LDKA  C   
Sbjct: 414 ITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFAN 473

Query: 491 MVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTLINKLLLC 550
           M+EK G    +  LD++++G+        AS  L ++V  + +KP  STYK LI+KLL  
Sbjct: 474 MLEK-GFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKI 533

Query: 551 GEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPSTTVVLQLF 610
            + ++AL LL MM+   +P + E F  Y++K GT +D  +FL  ++SK  PS      + 
Sbjct: 534 KKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVI 593

Query: 611 EAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLF 641
           EAF++ GR  DA++LL  CP + + H  + +LF
Sbjct: 594 EAFYREGRLTDAKNLLFICPHHFKTHPKISELF 617

[Close]
BLAST of CSPI05G29730 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-17
Identity = 95/451 (21.06%), Postives = 192/451 (42.57%), Query Frame = 0 

Query: 123 QLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYGMS 182
           +L  N   ++  F W     G + S   + +++G LG NG  K    L   MK +G    
Sbjct: 86  ELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFK 145

Query: 183 KTVRDKVLEKFDKDGLKSEAEKL----RDMFASGSTDKS----PDNIGSNVSRLIRTNLW 242
           +++   ++  +DK G   +  +L    R++++   T KS     + + S     +  N++
Sbjct: 146 ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 205

Query: 243 GEDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKH----DEQTYNA 302
            + + +++     +F   ++K        D A + +         M KH    +   Y  
Sbjct: 206 YDMLSRKIPPTLFTFGV-VMKAFCAVNEIDSALSLL-------RDMTKHGCVPNSVIYQT 265

Query: 303 MARVLGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVG 362
           +   L + + ++   ++++EM   G   + ETF  V+   CK   I EA  +    +  G
Sbjct: 266 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 325

Query: 363 DKPSEDCLTFLLKKIAVSEQFDL--DLFSRALKIFSESGNVLKDSMVF-AVLRSLSSVGR 422
             P +    +L+  +    + D   DLF R  K          + ++F  ++    + GR
Sbjct: 326 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---------PEIVIFNTLIHGFVTHGR 385

Query: 423 TGEFNEVL-NVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWA 482
             +   VL +++  YG V        + Y   + G    A + ++++   GC P+  ++ 
Sbjct: 386 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 445

Query: 483 SLIEGHCAAGDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVD 542
            L++G C  G +D+A + +++M   G  P+     + +++ +C K+H    +  +F  + 
Sbjct: 446 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV-GFNCLISAFC-KEHRIPEAVEIFREMP 505

Query: 543 KSQLKPRHSTYKTLINKLLLCGEFKDALKLL 558
           +   KP   T+ +LI+ L    E K AL LL
Sbjct: 506 RKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517

[Close]
BLAST of CSPI05G29730 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-17
Identity = 76/283 (26.86%), Postives = 126/283 (44.52%), Query Frame = 0 

Query: 288 YNAMARVLGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAM 347
           YN + + L  +  I    ++ +EM  +G   E++TF  ++   CK   + +A  L    +
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453

Query: 348 SVGDKPSEDCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGR 407
           S G  P  D  TF +     S Q  ++     L +  ++G    D  V+     L+ + +
Sbjct: 454 SKGYFP--DIFTFNILIHGYSTQLKMENALEILDVMLDNG---VDPDVYTYNSLLNGLCK 513

Query: 408 TGEFNEVLNVMK---EYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKT 467
           T +F +V+   K   E G   +      +   L R  K DEA   +  ++    NPD  T
Sbjct: 514 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 573

Query: 468 WASLIEGHCAAGDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDL 527
           + +LI+G C  GDLD A     KM E   V S+    ++I++ + +K + T A  L  ++
Sbjct: 574 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 633

Query: 528 VDKSQLKPRHSTYKTLINKLLLCGEFKDALK-LLGMMRNHEFP 567
           VD+  L P   TY+ +++     G      K LL MM N   P
Sbjct: 634 VDRC-LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670

The following BLAST results are available for this feature:
BLAST of CSPI05G29730 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M8911.3e-17350.15Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop... [more]
Q8LPF14.7e-16847.94Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... [more]
Q9STK52.0e-8932.81Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop... [more]
Q9FMF62.2e-1621.06Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
Q9CA582.9e-1626.86Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... [more]
BLAST of CSPI05G29730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSL30.0e+0099.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643230 PE=4 SV=1[more]
A0A5A7TD410.0e+0092.88Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C9Q10.0e+0092.73pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cuc... [more]
A0A6J1JYT42.4e-31082.15pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cuc... [more]
A0A6J1FJW51.6e-30782.00pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cuc... [more]
BLAST of CSPI05G29730 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141599.10.0e+0099.85pentatricopeptide repeat-containing protein At3g02490, mitochondrial [Cucumis sa... [more]
KAA0039407.10.0e+0092.88pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00594... [more]
XP_008459452.10.0e+0092.73PREDICTED: pentatricopeptide repeat-containing protein At3g02490, mitochondrial-... [more]
XP_038890460.10.0e+0085.91pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Benin... [more]
XP_022992918.15.0e-31082.15pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucur... [more]
BLAST of CSPI05G29730 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G02490.19.1e-17550.15Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G15980.13.3e-16947.94Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G48250.11.4e-9032.81Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G64320.11.6e-1721.06Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G74580.12.1e-1726.86Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 238..375
e-value: 1.4E-14
score: 55.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 376..642
e-value: 3.5E-23
score: 84.5
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 457..488
e-value: 9.1E-7
score: 28.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 535..563
e-value: 0.012
score: 15.8
coord: 287..315
e-value: 0.05
score: 13.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 536..567
e-value: 0.0017
score: 16.4
coord: 287..317
e-value: 4.2E-5
score: 21.5
coord: 464..496
e-value: 5.1E-7
score: 27.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 533..567
score: 9.371969
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 284..318
score: 9.865228
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 461..495
score: 11.32308
IPR044578Pentatricopeptide repeat-containing protein BIR6-likePANTHERPTHR47003OS01G0970900 PROTEINcoord: 10..652
NoneNo IPR availablePANTHERPTHR47003:SF3BNAC09G41880D PROTEINcoord: 10..652

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G29730.1CSPI05G29730.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008380 RNA splicing
molecular_function GO:0005515 protein binding