CSPI05G29720 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G29720
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 27894124 .. 27896478 (+)
RNA-Seq ExpressionCSPI05G29720
SyntenyCSPI05G29720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATATTTAGTAATTTTGTAATGATTTATTAACAAAATAAAAACTCAACACTAGAGAAGGCTACAAAATAGAGACCCTAGATTACATAAACTCAATTCTGGAGCTTCCTTTTTGTTCTCCACAAAGAATTTAATTTAATCATGCTCCATTGGGTCAACAAATTTCGACAAACAGATGAATTATTTGAAACAAAATCTTCTAATTGATCAAATAACACAAGAAACCTCGTAAACTACATTGTAGGGAGACTTTATGTGAGTCTAAGAAGTCAGATTTGGGGAAGCAGCAGCTTCTACAGGCTTCATGGAACAAAAAAGATCCAAAACATCAGCATGGTTACGAATGTAACCGGGGCATTTTAAAAGAAGGTCTTGAGCATCTCCGTGCCTTCCAGCTTGGAAAAATGCTTCAAATAATTGGAGAACTACAGTCGTTGAAGGAAATTTCTTCGATGTCATGCCCTTTAGGAATTCAAGGCCATCATCAGCTGTTCCAGACTTGGATACATATGAGATAAATGGTTCAATAAATGGTGGGAATTCATGATTTCTCATCATCCCCAACAATTTTAAAGCATCTTTGAATTCCCCACAGAGCAGTAGCTTGTTTATCAATGTTTTGTAAGTAGAATGTCGTGGTTTTAGCTGGCTTTTATCAACAAGATCGAAGAGAAGATGGCTAGCATCAGTTTCATGTTTCTTTTGACAGTAACCATTTACTATTAAATCCAAAGCATATGCAGCAGAAGGGACCCCTCCTTTCTCAACCATTTTGTGGATACAATCAGAAGCCTTGTCAAGATCTCCAGCAGCACAATGCCCTTCAATCAAAGATGCCCAGGTCTTGTTGTCTGGATTACATCCAGAAGCTTCTAAGTTATTCATGAAATCATTAGCTTCATCACTTTTTCCTGTCCTACTGAGTCGATATGCAACCTTTCTCTTCAAACCACCACTACATACATATCCATACTCTTTCATTACATTTAAAACCTCATTGAACTCTCCAGTTCTACCAACACTAGACAGAGACCTGAGAACTGCAAAAACCATTGAATCCTTCAACACATTACCTGACTCTGAAAATATCTTCAATGCCCTTGAGAATAGATCTAGATCAAACTGCTCACTTACTGCTATTTTCTTTAACAGAAAAGTAAGACAATCCTCCGAAGGCTTATCACCTACTGACATTGCAAAGACATACAAATTTACAGCTTCCTCAATCATTCTTCTTTTACAAAATCGTCCCAACACCTTGGTAAATGTCTCCATTTCCATTTTGTAACCTTGACTCCTCATTTCATCTACTACTTTCCAAAATCTATCAATACAATCTTCCCTTCCTAACACCCTAGCCATGGCGTTATAAGTTTGCTCATCATGCTTAAACATCCCACTCTCATCAATCCATAGGAAAAATATATATGCTTTTGCTGGGTCTGTGCTAAGATCCTCCAATATCATCTTAACCATATCACTTGAAAACGAAACACTCATATCACGCAGCTGCTGTTCAACATCCTCTCCCCACAAATTCGTCCTGATAAGTCTGCTGACGTTTGAACCAATATTATCCGGAGATTTGTCAGTGGATCCTGAAGCAAACATATCTCTCAACTTCTCAGCCTCACTCTTCAATCCATCCTTATCAAACTTCTCCAGTACCTTATCCCGTACAGTTTTAGACATTCCATAACCCTTTTTCTTCATATCACAATTCAAATCCCAAAACTTCTTAACAAGCCCATTAACACCTAAAATACCCAGCATCAAATTAAACGACTTGGAGCTAAGTTTCTCACCATAATCCCCCGACACCCAATCAAAAAACCGGATAGCATCATCAGGGTTCGACTCGAGCTGCCCCAATACCTCCAAAACCAAATCATGACTAATAACAACACCATTCGACTCTAAACCCTTCCTAATTTCATCCACATCGCGAGATTTAGATAAAATGTCAACTATAACAGCATGATCAGATTCCTGTTCAGCCGCCGGTTCGGAGGAAAACGTTCTAAGGGTACCGTAAATGGGTCTTACGATACTTGTGAAGTAAAAATCGGAAATGGGCGGCGAGGGGGTATGGTGAAGGGGATGTTTAGGAAACAAAGACGATAAAGAGCGAAGTGATTGAAGATTGGGATGGGAAAGTACCTGAAAATGTGAAGAGTTGGATGAAATGCGAAGGTGAGGTCGTAAACGAAGTAATCGCCATGAAAATCTCATATTTGCGGCTTTAGGGCACAGAATTGGAAGCAGAGCAAAGGCAAAGCGAGACGAAGGGAGAGTGGGAGAAGTAGGGTTTTAGAGAAGAATAAAATTTTTGATTTATTGGAAATAAAAAATAAAAT

mRNA sequence

AATATTTAGTAATTTTGTAATGATTTATTAACAAAATAAAAACTCAACACTAGAGAAGGCTACAAAATAGAGACCCTAGATTACATAAACTCAATTCTGGAGCTTCCTTTTTGTTCTCCACAAAGAATTTAATTTAATCATGCTCCATTGGGTCAACAAATTTCGACAAACAGATGAATTATTTGAAACAAAATCTTCTAATTGATCAAATAACACAAGAAACCTCGTAAACTACATTGTAGGGAGACTTTATGTGAGTCTAAGAAGTCAGATTTGGGGAAGCAGCAGCTTCTACAGGCTTCATGGAACAAAAAAGATCCAAAACATCAGCATGGTTACGAATGTAACCGGGGCATTTTAAAAGAAGGTCTTGAGCATCTCCGTGCCTTCCAGCTTGGAAAAATGCTTCAAATAATTGGAGAACTACAGTCGTTGAAGGAAATTTCTTCGATGTCATGCCCTTTAGGAATTCAAGGCCATCATCAGCTGTTCCAGACTTGGATACATATGAGATAAATGGTTCAATAAATGGTGGGAATTCATGATTTCTCATCATCCCCAACAATTTTAAAGCATCTTTGAATTCCCCACAGAGCAGTAGCTTGTTTATCAATGTTTTGTAAGTAGAATGTCGTGGTTTTAGCTGGCTTTTATCAACAAGATCGAAGAGAAGATGGCTAGCATCAGTTTCATGTTTCTTTTGACAGTAACCATTTACTATTAAATCCAAAGCATATGCAGCAGAAGGGACCCCTCCTTTCTCAACCATTTTGTGGATACAATCAGAAGCCTTGTCAAGATCTCCAGCAGCACAATGCCCTTCAATCAAAGATGCCCAGGTCTTGTTGTCTGGATTACATCCAGAAGCTTCTAAGTTATTCATGAAATCATTAGCTTCATCACTTTTTCCTGTCCTACTGAGTCGATATGCAACCTTTCTCTTCAAACCACCACTACATACATATCCATACTCTTTCATTACATTTAAAACCTCATTGAACTCTCCAGTTCTACCAACACTAGACAGAGACCTGAGAACTGCAAAAACCATTGAATCCTTCAACACATTACCTGACTCTGAAAATATCTTCAATGCCCTTGAGAATAGATCTAGATCAAACTGCTCACTTACTGCTATTTTCTTTAACAGAAAAGTAAGACAATCCTCCGAAGGCTTATCACCTACTGACATTGCAAAGACATACAAATTTACAGCTTCCTCAATCATTCTTCTTTTACAAAATCGTCCCAACACCTTGGTAAATGTCTCCATTTCCATTTTGTAACCTTGACTCCTCATTTCATCTACTACTTTCCAAAATCTATCAATACAATCTTCCCTTCCTAACACCCTAGCCATGGCGTTATAAGTTTGCTCATCATGCTTAAACATCCCACTCTCATCAATCCATAGGAAAAATATATATGCTTTTGCTGGGTCTGTGCTAAGATCCTCCAATATCATCTTAACCATATCACTTGAAAACGAAACACTCATATCACGCAGCTGCTGTTCAACATCCTCTCCCCACAAATTCGTCCTGATAAGTCTGCTGACGTTTGAACCAATATTATCCGGAGATTTGTCAGTGGATCCTGAAGCAAACATATCTCTCAACTTCTCAGCCTCACTCTTCAATCCATCCTTATCAAACTTCTCCAGTACCTTATCCCGTACAGTTTTAGACATTCCATAACCCTTTTTCTTCATATCACAATTCAAATCCCAAAACTTCTTAACAAGCCCATTAACACCTAAAATACCCAGCATCAAATTAAACGACTTGGAGCTAAGTTTCTCACCATAATCCCCCGACACCCAATCAAAAAACCGGATAGCATCATCAGGGTTCGACTCGAGCTGCCCCAATACCTCCAAAACCAAATCATGACTAATAACAACACCATTCGACTCTAAACCCTTCCTAATTTCATCCACATCGCGAGATTTAGATAAAATGTCAACTATAACAGCATGATCAGATTCCTGTTCAGCCGCCGGTTCGGAGGAAAACGTTCTAAGGGTACCGTAAATGGGTCTTACGATACTTGTGAAGTAAAAATCGGAAATGGGCGGCGAGGGGGTATGGTGAAGGGGATGTTTAGGAAACAAAGACGATAAAGAGCGAAGTGATTGAAGATTGGGATGGGAAAGTACCTGAAAATGTGAAGAGTTGGATGAAATGCGAAGGTGAGGTCGTAAACGAAGTAATCGCCATGAAAATCTCATATTTGCGGCTTTAGGGCACAGAATTGGAAGCAGAGCAAAGGCAAAGCGAGACGAAGGGAGAGTGGGAGAAGTAGGGTTTTAGAGAAGAATAAAATTTTTGATTTATTGGAAATAAAAAATAAAAT

Coding sequence (CDS)

ATGAAATCATTAGCTTCATCACTTTTTCCTGTCCTACTGAGTCGATATGCAACCTTTCTCTTCAAACCACCACTACATACATATCCATACTCTTTCATTACATTTAAAACCTCATTGAACTCTCCAGTTCTACCAACACTAGACAGAGACCTGAGAACTGCAAAAACCATTGAATCCTTCAACACATTACCTGACTCTGAAAATATCTTCAATGCCCTTGAGAATAGATCTAGATCAAACTGCTCACTTACTGCTATTTTCTTTAACAGAAAAGTAAGACAATCCTCCGAAGGCTTATCACCTACTGACATTGCAAAGACATACAAATTTACAGCTTCCTCAATCATTCTTCTTTTACAAAATCGTCCCAACACCTTGGTAAATGTCTCCATTTCCATTTTGTAA

Protein sequence

MKSLASSLFPVLLSRYATFLFKPPLHTYPYSFITFKTSLNSPVLPTLDRDLRTAKTIESFNTLPDSENIFNALENRSRSNCSLTAIFFNRKVRQSSEGLSPTDIAKTYKFTASSIILLLQNRPNTLVNVSISIL*
Homology
[Close]
BLAST of CSPI05G29720 vs. ExPASy TrEMBL
Match: A0A0A0KUI6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643235 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.8e-64
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 1   MKSLASSLFPVLLSRYATFLFKPPLHTYPYSFITFKTSLNSPVLPTLDRDLRTAKTIESF 60
           MKSLASSLFPVLLSRYATFLFKPPLHTYPYSFITFKTSLNSPVLPTLDRDLRTAKTIESF
Sbjct: 1   MKSLASSLFPVLLSRYATFLFKPPLHTYPYSFITFKTSLNSPVLPTLDRDLRTAKTIESF 60

Query: 61  NTLPDSENIFNALENRSRSNCSLTAIFFNRKVRQSSEGLSPTDIAKTYKFTASSIILLLQ 120
           NTLPDSENIFNALENRSRSNCSLTAIFFNRKVRQSSEGLSPTDIAKTYKFTASSIILLLQ
Sbjct: 61  NTLPDSENIFNALENRSRSNCSLTAIFFNRKVRQSSEGLSPTDIAKTYKFTASSIILLLQ 120

Query: 121 NRPNTLVNVSISIL 135
           NRPNTLVNVSISIL
Sbjct: 121 NRPNTLVNVSISIL 134

The following BLAST results are available for this feature:
BLAST of CSPI05G29720 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G29720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUI61.8e-64100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643235 PE=4 SV=1[more]
BLAST of CSPI05G29720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI05G29720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G29720.1CSPI05G29720.1mRNA