CSPI05G29350 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G29350
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUDP-glycosyltransferase 83A1-like
LocationChr5: 27618727 .. 27618918 (+)
RNA-Seq ExpressionCSPI05G29350
SyntenyCSPI05G29350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTCGAGCTTTTACACTCGGTCCACTCTCGTGGCAACGAAGGCAGTGCAGTTATGGAAAGAAGACGACTCTGGCCTACGTTGGGTGGACCAGCAACCGGTTGGCTCGGTTGAACGCATGCCATTTGGGAGAACCATGAGGAGATTGCCATGGGGATGGAGCTTACAGAGAGGGCATTCTTGTGGGTGG

mRNA sequence

ATGTACTCGAGCTTTTACACTCGGTCCACTCTCGTGGCAACGAAGGCAGTGCAGTTATGGAAAGAAGACGACTCTGGCCTACGTTGGGTGGACCAGCAACCGGTTGGCTCGGTTGAACGCATGCCATTTGGGAGAACCATGAGGAGATTGCCATGGGGATGGAGCTTACAGAGAGGGCATTCTTGTGGGTGG

Coding sequence (CDS)

ATGTACTCGAGCTTTTACACTCGGTCCACTCTCGTGGCAACGAAGGCAGTGCAGTTATGGAAAGAAGACGACTCTGGCCTACGTTGGGTGGACCAGCAACCGGTTGGCTCGGTTGAACGCATGCCATTTGGGAGAACCATGAGGAGATTGCCATGGGGATGGAGCTTACAGAGAGGGCATTCTTGTGGGTGG

Protein sequence

MYSSFYTRSTLVATKAVQLWKEDDSGLRWVDQQPVGSVERMPFGRTMRRLPWGWSLQRGHSCGW
Homology
[Close]
BLAST of CSPI05G29350 vs. ExPASy TrEMBL
Match: A0A6J1FFY3 (UDP-glycosyltransferase 83A1-like OS=Cucurbita moschata OX=3662 GN=LOC111445126 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.5e-05
Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 7   TRSTLVATKAVQLWKEDDSGLRWVDQQPVGSVERMPFG 45
           T   L+AT+A QLWKEDDS +RW+DQQP GSV  M FG
Sbjct: 242 TIGPLIATEAGQLWKEDDSCIRWLDQQPAGSVVYMAFG 279

[Close]
BLAST of CSPI05G29350 vs. ExPASy TrEMBL
Match: A0A6J1K0L2 (UDP-glycosyltransferase 83A1-like OS=Cucurbita maxima OX=3661 GN=LOC111489540 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.7e-04
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 7   TRSTLVATKAVQLWKEDDSGLRWVDQQPVGSVERMPFG 45
           T   L+AT+A QLWKEDDS + W+DQQP GSV  M FG
Sbjct: 278 TIGPLIATEAGQLWKEDDSCIHWLDQQPAGSVVYMGFG 315

[Close]
BLAST of CSPI05G29350 vs. ExPASy TrEMBL
Match: A0A6J1K2Q0 (UDP-glycosyltransferase 83A1-like OS=Cucurbita maxima OX=3661 GN=LOC111489539 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.7e-04
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 7   TRSTLVATKAVQLWKEDDSGLRWVDQQPVGSVERMPFG 45
           T   L+AT+A QLWKEDDS + W+DQQP GSV  M FG
Sbjct: 278 TIGPLIATEAGQLWKEDDSCIHWLDQQPAGSVVYMGFG 315

[Close]
BLAST of CSPI05G29350 vs. NCBI nr
Match: XP_038889643.1 (UDP-glycosyltransferase 83A1-like [Benincasa hispida])

HSP 1 Score: 58.5 bits (140), Expect = 2.4e-05
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0 

Query: 7   TRSTLVATKAVQLWKEDDSGLRWVDQQPVGSVERMPFGRT 47
           T   L+AT+A QLWKEDDS LRW+D+QPVGSV  M FG T
Sbjct: 236 TLGPLIATEAGQLWKEDDSCLRWLDRQPVGSVVYMAFGST 275

[Close]
BLAST of CSPI05G29350 vs. NCBI nr
Match: KAG6578540.1 (UDP-glycosyltransferase 83A1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04
Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 7   TRSTLVATKAVQLWKEDDSGLRWVDQQPVGSVERMPFG 45
           T   L+AT+A QLWKEDDS +RW+DQQP GSV  M FG
Sbjct: 242 TIGPLIATEAGQLWKEDDSCIRWLDQQPAGSVVYMAFG 279

[Close]
BLAST of CSPI05G29350 vs. NCBI nr
Match: KAG7016100.1 (UDP-glycosyltransferase 83A1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04
Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 7   TRSTLVATKAVQLWKEDDSGLRWVDQQPVGSVERMPFG 45
           T   L+AT+A QLWKEDDS +RW+DQQP GSV  M FG
Sbjct: 242 TIGPLIATEAGQLWKEDDSCIRWLDQQPAGSVVYMAFG 279

[Close]
BLAST of CSPI05G29350 vs. NCBI nr
Match: KAG6578550.1 (UDP-glycosyltransferase 83A1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04
Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 7   TRSTLVATKAVQLWKEDDSGLRWVDQQPVGSVERMPFG 45
           T   L+AT+A QLWKEDDS +RW+DQQP GSV  M FG
Sbjct: 134 TIGPLIATEAGQLWKEDDSCIRWLDQQPAGSVVYMAFG 171

[Close]
BLAST of CSPI05G29350 vs. NCBI nr
Match: XP_022939127.1 (UDP-glycosyltransferase 83A1-like [Cucurbita moschata])

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04
Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 7   TRSTLVATKAVQLWKEDDSGLRWVDQQPVGSVERMPFG 45
           T   L+AT+A QLWKEDDS +RW+DQQP GSV  M FG
Sbjct: 242 TIGPLIATEAGQLWKEDDSCIRWLDQQPAGSVVYMAFG 279

The following BLAST results are available for this feature:
BLAST of CSPI05G29350 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G29350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FFY37.5e-0565.79UDP-glycosyltransferase 83A1-like OS=Cucurbita moschata OX=3662 GN=LOC111445126 ... [more]
A0A6J1K0L23.7e-0463.16UDP-glycosyltransferase 83A1-like OS=Cucurbita maxima OX=3661 GN=LOC111489540 PE... [more]
A0A6J1K2Q03.7e-0463.16UDP-glycosyltransferase 83A1-like OS=Cucurbita maxima OX=3661 GN=LOC111489539 PE... [more]
BLAST of CSPI05G29350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038889643.12.4e-0567.50UDP-glycosyltransferase 83A1-like [Benincasa hispida][more]
KAG6578540.11.5e-0465.79UDP-glycosyltransferase 83A1, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7016100.11.5e-0465.79UDP-glycosyltransferase 83A1, partial [Cucurbita argyrosperma subsp. argyrosperm... [more]
KAG6578550.11.5e-0465.79UDP-glycosyltransferase 83A1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022939127.11.5e-0465.79UDP-glycosyltransferase 83A1-like [Cucurbita moschata][more]
BLAST of CSPI05G29350 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G29350.1CSPI05G29350.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016757 glycosyltransferase activity