CSPI05G28990 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTCTCTCTCTCTCTCTGTCTCAAAGTAACAAAAAAGTTTGGTAGAGAGAGAAAGATTATGGTTCACCCTAAACTTTTCTCAACTCTTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGTACTCAAACTTCTTCTTCTATTTATTTTCTAATCCTTTTTTCATGTATATTTCTATATATATATATTCGTCTCCTGAGCTCACATCGTTTATTTTTAATTTTTTTTCTCAAGGATTAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCAATGTTAGAATTAGTCCATCACTCAAGGTGTGATTTTCTTTTTGAACAGTTGATAAAAGGGTATGTTTTTGTTTTAAAATTTTGGAATGATAATAATTTGATTATTGTGTTAACTTAGCAGGGAATTGATGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCTTCACCAGCTACTTAATTAATTTGTAATAGTTTTTCTTTTCTTTTTCTAATAAAAAGACCACAGCTAATAATATTGTTTAATTTCTGTGAGGTTTTTCATATCTAAGATATATTATGAATATTATTTTTCTTTTAACTAATTTATTCCAAGTGTAATTCATGCATGGTGGTGAGATAAATTGGAGGTTTTGTTGTCTTTTACTCATTGGTGAACTTCCACTCAATTTCCCTTGTATGTTAAGAAAAATAATAATGGGAGGGGACCCATTTCTTCCCTGCTCAAAGTTATTAAATACAAAAATTCAAAACTACTTGTTTAGAAAATGAACTAAAATATTTATGAAATTTAGAAGGGTG CTCTCTCTCTCTCTCTCTCTCTGTCTCAAAGTAACAAAAAAGTTTGGTAGAGAGAGAAAGATTATGGTTCACCCTAAACTTTTCTCAACTCTTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGATTAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCAATGTTAGAATTAGTCCATCACTCAAGGGAATTGATGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCTTCACCAGCTACTTAATTAATTTGTAATAGTTTTTCTTTTCTTTTTCTAATAAAAAGACCACAGCTAATAATATTGTTTAATTTCTGTGAGGTTTTTCATATCTAAGATATATTATGAATATTATTTTTCTTTTAACTAATTTATTCCAAGTGTAATTCATGCATGGTGGTGAGATAAATTGGAGGTTTTGTTGTCTTTTACTCATTGGTGAACTTCCACTCAATTTCCCTTGTATGTTAAGAAAAATAATAATGGGAGGGGACCCATTTCTTCCCTGCTCAAAGTTATTAAATACAAAAATTCAAAACTACTTGTTTAGAAAATGAACTAAAATATTTATGAAATTTAGAAGGGTG ATGGTTCACCCTAAACTTTTCTCAACTCTTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGATTAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCAATGTTAGAATTAGTCCATCACTCAAGGGAATTGATGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCTTCACCAGCTACTTAA MVHPKLFSTLLLLSCFLLLSFTHGLKVEMIESLGHGSNVRISPSLKGIDGKSRKMMIEIMDYADPGPNTNTRSGYLNPPPPPSPAT* Homology
BLAST of CSPI05G28990 vs. ExPASy TrEMBL
Match: A0A0A0KSB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636600 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 8.2e-39 Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of CSPI05G28990 vs. ExPASy TrEMBL
Match: A0A5D3CUT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00160 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 9.8e-16 Identity = 49/56 (87.50%), Postives = 50/56 (89.29%), Query Frame = 0
BLAST of CSPI05G28990 vs. ExPASy TrEMBL
Match: A0A498HG62 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037098 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.4e-07 Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of CSPI05G28990 vs. ExPASy TrEMBL
Match: A0A540L840 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_031846 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06 Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of CSPI05G28990 vs. ExPASy TrEMBL
Match: A0A540M3Y6 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_021117 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 3.2e-06 Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 0
BLAST of CSPI05G28990 vs. NCBI nr
Match: KGN52468.1 (hypothetical protein Csa_007886 [Cucumis sativus]) HSP 1 Score: 169.1 bits (427), Expect = 1.7e-38 Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of CSPI05G28990 vs. NCBI nr
Match: KAA0039487.1 (hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa] >TYK15242.1 hypothetical protein E5676_scaffold892G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 92.4 bits (228), Expect = 2.0e-15 Identity = 49/56 (87.50%), Postives = 50/56 (89.29%), Query Frame = 0
BLAST of CSPI05G28990 vs. NCBI nr
Match: XP_023527249.1 (uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 72.0 bits (175), Expect = 2.8e-09 Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 0
BLAST of CSPI05G28990 vs. NCBI nr
Match: KAG6602500.1 (hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033174.1 hypothetical protein SDJN02_07228 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 70.1 bits (170), Expect = 1.1e-08 Identity = 46/85 (54.12%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of CSPI05G28990 vs. NCBI nr
Match: XP_023527257.1 (uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 68.9 bits (167), Expect = 2.4e-08 Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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