CSPI05G26850 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G26850
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Translation initiation factor IF-2, putative isoform 1
Location	Chr5: 25605299 .. 25608465 (-)
RNA-Seq Expression	CSPI05G26850
Synteny	CSPI05G26850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCGAACTTCAATTAATTTCACTGTGCGCTACATTAATTTTGGGTTTGAAAGTTTTTTGTATTGTTTTCATTGACGAAAATTCAGTGACCAAGTGTGGATTCCTCTCAGAATGCTGCAACGTTAGTAGTTCAGTAAAGTCAAGAAGAAAGACTTGTTGATGATAATGGCAAGAAGAAAGGCAAAGAAAACAGTTAAGAAGTCCAGCCCTTCATCTGGACGAGACGCAAAAGATGAAGCAGCGAATAAGTTAAAGACTGACTCCGACGAAGATGGTATGTTGATATTCGTAGTGATTTCAATCCTTTTTCCCCAAGCCGGAATTTCATTTTAGGAAATTTGTCTTGTTTCTCTTCACGTGTTTAGTTGAACGGCATGCTGCTGCAATCCGTGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGTATTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAAGAGAAACTTCCAAGCTTGTCCATTTCGATAAGAGGCGAACAAGGTGAAATTGAAGTACGATGGAAGGATACAGAGGATGAATTACACACCAATCCAGCGGATGGAGTAGATATACATGCTTCTCTTCTTCATCGCCTTTCCACAGCTTATCCTTACTGCTCTGCCGGAATGCGATCGTTTAATGGATTTGAATTTTCCAGTAAATCAGGTATCTGTAGATTTTGATTGTGGTGCTTTAAATTGTTTGGTAAGTACTCCCTTGTGTGACGTTTCTGCTGCAACTCACCTTCTTTTCTTTCCTGGTGGCAGTGAAAACAAATCCTTTCAATGCTGAGAACCTGCAAATTCCGAACTTTGTAAGCAATTTTACTTTTAAGATATCTCAGTGTTGATTTTTCACAATCTTTATAACATAACACGTATTGATTTTGAGGTGAAACATAATTTGTACATGATCTGGTATGAAACATCATAAATTATTAATTTAGTATTAAAGTCCATAAAGTCTAGACGGATATTTATTTAAAAAAGAAGGATTTGATCCACGAATAGTAAACATGAAGAGGCACTACCTCGACGAACATGCTGATGATCCACATTGGAAAAATTGAAGATACGTCATAATCTTTATAAGAGAACATGAATTACTACATGCAAAACTAATTTTTGTAATTGTTGTACGATAGGATCTTCTTTTCTTCTCCATTTAATCATATCGATGAACGGTTACTGTTTCCTATATATAAAAATGATAGATTAATCCTTTCATTTTTCCATTAGATGGATACCCATGTTTATCTAGCAGGTATTGACTGATATATTTATTGACAATTCTTGATGTTTAGGTTTTGGAGGAGCCCTCGGATAATATGACGCTTGGCATGCCAGATATTCTCCAGACTCCTGGCGTTCGTATCTTCATGGTTCTAGCACCTCACTTATTGCATTAGCCTTCTTATGTTATCTATTATTGCCATTTTTCAACATTTGGTAATGTCTCTGGCCCAAATTATCTAGGCAGATAGGCACCGCGGTTAAAGGAATAGAATTATAGTAGTGGTAGGGTGTCTGCAGTCAATTATTGATGTTTTAATAATTAAGGGTATCTAAGTTAATCCATGTCTATAAACTAATTATAGACAATTATCAAGCCTTTATTAGCTCAATCTTCAGCTTCAATAATTTTGGATACTGGACGTCTTGGTAATAAGTTGGGATCTTGTTGCTCATCATGGATTTGGGCTTTGGGTTAATAAGGTCCTATGTAATTGGTGTAAACAACACTAGTTCAACACATAGTTGTCACCTCATCTATCAAGGATTTGATATCCTATGAGTTCTTTTGACAAACCAAAGTGGGGTCAAATATGGTTGTTTTGTGAGGATAATTGAGGCTCACAGGTTAATCCCACGAAGACACTTGCTCTTCGTGTACTTGTTGGTAAATCGGGAATGAACTTTGTTACTAGTATTGGTTTAAACTTTATTATAAAAGTAATATTGGTTGGTTTTACGGTAGGATAAAATAGAAGTTTAGAAAAGTTGTATTATAGTTTTTCCTCTCGCTCTCTCTTTAGTGTTCATTTTGGATTTGATTATTTCTACTTTAGTTTTCAATGGAAATGTTCCTATGGATGTCAGTACCATCTACTGATCAAAGTTATCAACTTGAAGGGAAAAATTAATTGCAGCTTTTAAAGCTGCAAAAAAAGTTATTGGGTGGCAGTACTCCATCATTTATCATTAAGCATGTCATAAATAATCACTGCAGTGTAGAGGGAATGATGGAAGTGCTGGTTTCATTTCAAGTCATAATTATCATTATAATTACGGATTAGAATCATTTATTGACGGATGGAGATATAGAAAAAGCTAGGAAAACTTTCGACCCCATGGAAAGAAGCTGGACGATAATTCCAAGTACAAAGATCAGCATGGCTATAACTAAACAATGTGTGAAATTTACATTTAGTAAAATCTCAGCCTTGTTTGAGAAATTGTCTGAATGGAACTTTCTGAAGGCTATTTTTGCCTCTATTTAGTGTATTCTACAATAATCTAACTAGTTATCATTTCATAGATAAGTAACCAAAGATTTGTCTTTTGGGATGACACCGAAAACCCGAAGACTGCCGAAGCCAGGCGAGATGCTTGTGTCTATCCATGGATCCCCACTTGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGGTATATTCATCTAAGCTCATATCTAGAAATGCAGTGCAGTATATTTTGAAACTTTCAATTAGAAATGTGATCGAGTAAGCTTAATAAGTTGGTGGGTAATGGGTATAAATCATGATTCTACAATTTTTCTAATGGATAAATTAATAATGTGCAGAATCAGAAGAGGGTTGATCGGTTGATTCAAGGTCACTTGACCGATTGTCAATAAAACCGAAACTTCAGATGCGTTTATCCCCGACTGTCATTCTACCCTTTCTTTCATAAGAAGGTTGAGTCAAGGACTCTTAAGGTTTGTTTGGTTCATGATCCATAAACAAATTAGTAAATACAACTCTAGAAACCACAGAAATGTGGGATGATAGAGAAAGTGAAAATGGAAAGATGCAGCTTGAAAATTAGGACAACTCTGGTGTGGTTTAGAGTGAAAATGGAAGAAATATGGTTTGGTTTGGGCCTC

mRNA sequence

CTGCGAACTTCAATTAATTTCACTGTGCGCTACATTAATTTTGGGTTTGAAAGTTTTTTGTATTGTTTTCATTGACGAAAATTCAGTGACCAAGTGTGGATTCCTCTCAGAATGCTGCAACGTTAGTAGTTCAGTAAAGTCAAGAAGAAAGACTTGTTGATGATAATGGCAAGAAGAAAGGCAAAGAAAACAGTTAAGAAGTCCAGCCCTTCATCTGGACGAGACGCAAAAGATGAAGCAGCGAATAAGTTAAAGACTGACTCCGACGAAGATGTTGAACGGCATGCTGCTGCAATCCGTGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGTATTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAAGAGAAACTTCCAAGCTTGTCCATTTCGATAAGAGGCGAACAAGGTGAAATTGAAGTACGATGGAAGGATACAGAGGATGAATTACACACCAATCCAGCGGATGGAGTAGATATACATGCTTCTCTTCTTCATCGCCTTTCCACAGCTTATCCTTACTGCTCTGCCGGAATGCGATCGTTTAATGGATTTGAATTTTCCAGTAAATCAGTGAAAACAAATCCTTTCAATGCTGAGAACCTGCAAATTCCGAACTTTGTTTTGGAGGAGCCCTCGGATAATATGACGCTTGGCATGCCAGATATTCTCCAGACTCCTGGCGTTCGTATCTTCATGATAAGTAACCAAAGATTTGTCTTTTGGGATGACACCGAAAACCCGAAGACTGCCGAAGCCAGGCGAGATGCTTGTGTCTATCCATGGATCCCCACTTGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGAATCAGAAGAGGGTTGATCGGTTGATTCAAGGTCACTTGACCGATTGTCAATAAAACCGAAACTTCAGATGCGTTTATCCCCGACTGTCATTCTACCCTTTCTTTCATAAGAAGGTTGAGTCAAGGACTCTTAAGGTTTGTTTGGTTCATGATCCATAAACAAATTAGTAAATACAACTCTAGAAACCACAGAAATGTGGGATGATAGAGAAAGTGAAAATGGAAAGATGCAGCTTGAAAATTAGGACAACTCTGGTGTGGTTTAGAGTGAAAATGGAAGAAATATGGTTTGGTTTGGGCCTC

Coding sequence (CDS)

ATGATAATGGCAAGAAGAAAGGCAAAGAAAACAGTTAAGAAGTCCAGCCCTTCATCTGGACGAGACGCAAAAGATGAAGCAGCGAATAAGTTAAAGACTGACTCCGACGAAGATGTTGAACGGCATGCTGCTGCAATCCGTGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGTATTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAAGAGAAACTTCCAAGCTTGTCCATTTCGATAAGAGGCGAACAAGGTGAAATTGAAGTACGATGGAAGGATACAGAGGATGAATTACACACCAATCCAGCGGATGGAGTAGATATACATGCTTCTCTTCTTCATCGCCTTTCCACAGCTTATCCTTACTGCTCTGCCGGAATGCGATCGTTTAATGGATTTGAATTTTCCAGTAAATCAGTGAAAACAAATCCTTTCAATGCTGAGAACCTGCAAATTCCGAACTTTGTTTTGGAGGAGCCCTCGGATAATATGACGCTTGGCATGCCAGATATTCTCCAGACTCCTGGCGTTCGTATCTTCATGATAAGTAACCAAAGATTTGTCTTTTGGGATGACACCGAAAACCCGAAGACTGCCGAAGCCAGGCGAGATGCTTGTGTCTATCCATGGATCCCCACTTGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGA

Protein sequence

MIMARRKAKKTVKKSSPSSGRDAKDEAANKLKTDSDEDVERHAAAIRAIRDVEIERLITVLRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPADGVDIHASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMTLGMPDILQTPGVRIFMISNQRFVFWDDTENPKTAEARRDACVYPWIPTWCLQGRQHGSNP*

Homology

[Close]

BLAST of CSPI05G26850 vs. ExPASy TrEMBL
Match: A0A0A0KRH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622550 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.8e-98
Identity = 189/194 (97.42%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MIMARRKAKKTVKKSSPSSGRDAKDEAANKLKTDSDEDVERHAAAIRAIRDVEIERLITV 60
           MIMARRKAKKTVKKSSPSSGRDAKDEA NKLKTDSDEDVERHAAAIRAIRDVEIERLITV
Sbjct: 1   MIMARRKAKKTVKKSSPSSGRDAKDEAVNKLKTDSDEDVERHAAAIRAIRDVEIERLITV 60

Query: 61  LRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPADGVDI 120
           LRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRG+QGEIEVRWKDTEDELHTNPADGVDI
Sbjct: 61  LRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGKQGEIEVRWKDTEDELHTNPADGVDI 120

Query: 121 HASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMTLGM 180
           HASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSD+MTLGM
Sbjct: 121 HASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDDMTLGM 180

Query: 181 PDILQTPGVRIFMV 195
           PDI+QTPGVRIFM+
Sbjct: 181 PDIVQTPGVRIFMI 194

[Close]

BLAST of CSPI05G26850 vs. ExPASy TrEMBL
Match: A0A5A7SXV4 (Translation initiation factor IF-2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002410 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 8.7e-92
Identity = 178/187 (95.19%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 3   MARRKAKKTVKKSSPSSGRDAKDEAANKLKTDSDEDVERHAAAIRAIRDVEIERLITVLR 62
           MARRKAKKTVKKSSPSSGR AKDEAA+K+KT SDEDVERHAAAIRAIRDVEIERLIT LR
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTHSDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 63  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPADGVDIHA 122
           LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRG+QGEIEV+WKDTEDELHTNPADGVDIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPADGVDIHA 120

Query: 123 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMTLGMPD 182
           SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNM LGMPD
Sbjct: 121 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMVLGMPD 180

Query: 183 ILQTPGV 190
           ILQTPG+
Sbjct: 181 ILQTPGI 187

[Close]

BLAST of CSPI05G26850 vs. ExPASy TrEMBL
Match: A0A1S4DWB9 (uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 8.7e-92
Identity = 178/187 (95.19%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 3   MARRKAKKTVKKSSPSSGRDAKDEAANKLKTDSDEDVERHAAAIRAIRDVEIERLITVLR 62
           MARRKAKKTVKKSSPSSGR AKDEAA+K+KT SDEDVERHAAAIRAIRDVEIERLIT LR
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTHSDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 63  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPADGVDIHA 122
           LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRG+QGEIEV+WKDTEDELHTNPADGVDIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPADGVDIHA 120

Query: 123 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMTLGMPD 182
           SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNM LGMPD
Sbjct: 121 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMVLGMPD 180

Query: 183 ILQTPGV 190
           ILQTPG+
Sbjct: 181 ILQTPGI 187

[Close]

BLAST of CSPI05G26850 vs. ExPASy TrEMBL
Match: A0A6J1GFT3 (uncharacterized protein LOC111453776 OS=Cucurbita moschata OX=3662 GN=LOC111453776 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.0e-83
Identity = 167/193 (86.53%), Postives = 177/193 (91.71%), Query Frame = 0


Query: 3   MARRKAKKTVKKSSPSSGRDAKDEAANKLKTD------SDEDVERHAAAIRAIRDVEIER 62
           MARRKAKK+VKKSSPS  R+AKD +AN+LK++      SDEDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPIREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 63  LITVLRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPAD 122
           LIT LRLLRSYFNKEQLQTPLLQFFEEKLPSLSIS RGEQGEIEV+WKDTEDELHTNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 123 GVDIHASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNM 182
           G+DIHASLLHRLSTAYP CSAGMRSFNGFEFSSKSVKTNPFN ENLQIPNF LEEPSDNM
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 183 TLGMPDILQTPGV 190
            LGMPD+L+TPGV
Sbjct: 181 VLGMPDLLRTPGV 193

[Close]

BLAST of CSPI05G26850 vs. ExPASy TrEMBL
Match: A0A6J1ILD3 (uncharacterized protein LOC111478496 OS=Cucurbita maxima OX=3661 GN=LOC111478496 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.7e-83
Identity = 166/192 (86.46%), Postives = 176/192 (91.67%), Query Frame = 0


Query: 3   MARRKAKKTVKKSSPSSGRDAKDEAANKLKTD------SDEDVERHAAAIRAIRDVEIER 62
           MARRKAKK+VKKSSPS  R+AKD +AN+LK++      SDEDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 63  LITVLRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPAD 122
           LIT LRLLRSYFNKEQLQTPLLQFF EKLPSLSIS RGEQGEIEV+WKDTEDELHTNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFVEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 123 GVDIHASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNM 182
           G+DIHASLLHRLSTAYP CSAG+RSFNGFEFSSKSVKTNPFN ENLQIPNFVLEEPSDNM
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGIRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNM 180

Query: 183 TLGMPDILQTPG 189
            LGMPD+LQTPG
Sbjct: 181 VLGMPDLLQTPG 192

[Close]

BLAST of CSPI05G26850 vs. NCBI nr
Match: XP_031741813.1 (uncharacterized protein LOC101204054 [Cucumis sativus] >KGN52240.1 hypothetical protein Csa_007879 [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 5.8e-98
Identity = 189/194 (97.42%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MIMARRKAKKTVKKSSPSSGRDAKDEAANKLKTDSDEDVERHAAAIRAIRDVEIERLITV 60
           MIMARRKAKKTVKKSSPSSGRDAKDEA NKLKTDSDEDVERHAAAIRAIRDVEIERLITV
Sbjct: 1   MIMARRKAKKTVKKSSPSSGRDAKDEAVNKLKTDSDEDVERHAAAIRAIRDVEIERLITV 60

Query: 61  LRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPADGVDI 120
           LRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRG+QGEIEVRWKDTEDELHTNPADGVDI
Sbjct: 61  LRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGKQGEIEVRWKDTEDELHTNPADGVDI 120

Query: 121 HASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMTLGM 180
           HASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSD+MTLGM
Sbjct: 121 HASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDDMTLGM 180

Query: 181 PDILQTPGVRIFMV 195
           PDI+QTPGVRIFM+
Sbjct: 181 PDIVQTPGVRIFMI 194

[Close]

BLAST of CSPI05G26850 vs. NCBI nr
Match: KAA0034696.1 (Translation initiation factor IF-2, putative isoform 1 [Cucumis melo var. makuwa] >TYK09247.1 Translation initiation factor IF-2, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-91
Identity = 178/187 (95.19%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 3   MARRKAKKTVKKSSPSSGRDAKDEAANKLKTDSDEDVERHAAAIRAIRDVEIERLITVLR 62
           MARRKAKKTVKKSSPSSGR AKDEAA+K+KT SDEDVERHAAAIRAIRDVEIERLIT LR
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTHSDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 63  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPADGVDIHA 122
           LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRG+QGEIEV+WKDTEDELHTNPADGVDIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPADGVDIHA 120

Query: 123 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMTLGMPD 182
           SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNM LGMPD
Sbjct: 121 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMVLGMPD 180

Query: 183 ILQTPGV 190
           ILQTPG+
Sbjct: 181 ILQTPGI 187

[Close]

BLAST of CSPI05G26850 vs. NCBI nr
Match: XP_016900279.1 (PREDICTED: uncharacterized protein LOC103489436 [Cucumis melo])

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-91
Identity = 178/187 (95.19%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 3   MARRKAKKTVKKSSPSSGRDAKDEAANKLKTDSDEDVERHAAAIRAIRDVEIERLITVLR 62
           MARRKAKKTVKKSSPSSGR AKDEAA+K+KT SDEDVERHAAAIRAIRDVEIERLIT LR
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTHSDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 63  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPADGVDIHA 122
           LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRG+QGEIEV+WKDTEDELHTNPADGVDIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPADGVDIHA 120

Query: 123 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMTLGMPD 182
           SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNM LGMPD
Sbjct: 121 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMVLGMPD 180

Query: 183 ILQTPGV 190
           ILQTPG+
Sbjct: 181 ILQTPGI 187

[Close]

BLAST of CSPI05G26850 vs. NCBI nr
Match: XP_038891412.1 (uncharacterized protein LOC120080833 [Benincasa hispida] >XP_038891413.1 uncharacterized protein LOC120080833 [Benincasa hispida])

HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87
Identity = 171/187 (91.44%), Postives = 178/187 (95.19%), Query Frame = 0


Query: 3   MARRKAKKTVKKSSPSSGRDAKDEAANKLKTDSDEDVERHAAAIRAIRDVEIERLITVLR 62
           MARR+AKKTVKKSSPS GRDAKDEAAN+LK+D DEDVERHAAAIRAIRDVEIERLIT LR
Sbjct: 1   MARRRAKKTVKKSSPSPGRDAKDEAANELKSDCDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 63  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPADGVDIHA 122
           LLRSYFNKEQLQTPLLQFFEEKLP+LSIS RGEQGEIEV+WKDTEDELHTNPADG+DIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPNLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHA 120

Query: 123 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMTLGMPD 182
           SLLH LSTAYPYCSAGMRSFNGFEFSSKSVKTNPFN ENLQIPN  LEEPSDNM LGMP+
Sbjct: 121 SLLHCLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNLALEEPSDNMVLGMPE 180

Query: 183 ILQTPGV 190
           ILQTPGV
Sbjct: 181 ILQTPGV 187

[Close]

BLAST of CSPI05G26850 vs. NCBI nr
Match: KAG7034170.1 (hypothetical protein SDJN02_03897, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86
Identity = 173/198 (87.37%), Postives = 182/198 (91.92%), Query Frame = 0


Query: 3   MARRKAKKTVKKSSPSSGRDAKDEAANKLKTD------SDEDVERHAAAIRAIRDVEIER 62
           MARRKAKK+VKKSSPS  R+AKD +AN+LK++      SDEDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 63  LITVLRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPAD 122
           LIT LRLLRSYFNKEQLQTPLLQFFEEKLPSLSIS RGEQGEIEV+WKDTEDELHTNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 123 GVDIHASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNM 182
           G+DIHASLLHRLSTAYP CSAGMRSFNGFEFSSKSVKTNPFN ENLQIPNF LEEPSDNM
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 183 TLGMPDILQTPGVRIFMV 195
            LGMPD+LQTPGVRIFMV
Sbjct: 181 VLGMPDLLQTPGVRIFMV 198

[Close]

BLAST of CSPI05G26850 vs. TAIR 10
Match: AT4G39630.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-31
Identity = 82/187 (43.85%), Postives = 112/187 (59.89%), Query Frame = 0


Query: 3   MARRKAKKTVKKSSPSSGRDAKDEAANKLKTDSDEDVERHAAAIRAIRDVEIERLITVLR 62
           M +RKAK+ VK +      + +     K +   DE+VER  AAIRAIRDVEIE+++T LR
Sbjct: 1   MPKRKAKECVKLTEEDRNDEKRIRIEEKKEDFVDEEVERQIAAIRAIRDVEIEQMLTALR 60

Query: 63  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGEQGEIEVRWKDTEDELHTNPADGVDIHA 122
           LLRSYF +EQL TP+L FF+E LP LSIS   E GEIE++W+D   +      +GVD++ 
Sbjct: 61  LLRSYFTEEQLHTPVLDFFKENLPDLSISRNEETGEIELKWRDENGDSFAGNENGVDMNY 120

Query: 123 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMTLGMPD 182
           S+L RLS  +    +   S  G++    +VK N    +N Q+ N V +  S+N  L   D
Sbjct: 121 SILKRLSMRFTDLYS-RSSLGGYDLPD-NVKANLLGTDNPQLDNLVFQGTSENQMLPGHD 180

Query: 183 ILQTPGV 190
             QTPGV
Sbjct: 181 AFQTPGV 185

The following BLAST results are available for this feature:

BLAST of CSPI05G26850 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G26850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRH4	2.8e-98	97.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622550 PE=4 SV=1	[more]
A0A5A7SXV4	8.7e-92	95.19	Translation initiation factor IF-2, putative isoform 1 OS=Cucumis melo var. maku...	[more]
A0A1S4DWB9	8.7e-92	95.19	uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=...	[more]
A0A6J1GFT3	2.0e-83	86.53	uncharacterized protein LOC111453776 OS=Cucurbita moschata OX=3662 GN=LOC1114537...	[more]
A0A6J1ILD3	9.7e-83	86.46	uncharacterized protein LOC111478496 OS=Cucurbita maxima OX=3661 GN=LOC111478496...	[more]

BLAST of CSPI05G26850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741813.1	5.8e-98	97.42	uncharacterized protein LOC101204054 [Cucumis sativus] >KGN52240.1 hypothetical ...	[more]
KAA0034696.1	1.8e-91	95.19	Translation initiation factor IF-2, putative isoform 1 [Cucumis melo var. makuwa...	[more]
XP_016900279.1	1.8e-91	95.19	PREDICTED: uncharacterized protein LOC103489436 [Cucumis melo]	[more]
XP_038891412.1	1.2e-87	91.44	uncharacterized protein LOC120080833 [Benincasa hispida] >XP_038891413.1 unchara...	[more]
KAG7034170.1	1.7e-86	87.37	hypothetical protein SDJN02_03897, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CSPI05G26850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39630.1	1.7e-31	43.85	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR37248	TRANSLATION INITIATION FACTOR	coord: 3..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G26850.2	CSPI05G26850.2	mRNA
CSPI05G26850.1	CSPI05G26850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0003743	translation initiation factor activity