CSPI05G26820 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G26820
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 25595215 .. 25595550 (+)
RNA-Seq ExpressionCSPI05G26820
SyntenyCSPI05G26820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATTTTGGAAAAGGAAGGCTTTGAGATGTGTAGTAATATTAAGTAGTTAATTTGATATATGAGGGGTGAGATGGAAAAATGAGGATTGTGTTGGGTTGGTATTTATAGATATTAGATATATATGTGTTTGTTTGAATGGGGTTGGTGTAGGGGGCCGGCCATGGGCGGCCGGCTGTGGGGTGCCGAATGGGGGCTGAAGGATACAAGAGGATGGGTGTGGTTGGGGACTTTGACAGCTTGTGGAGAAAAGCCAGCGCAATATGGCAAATGCTTAGAAACTTTCATGTGGAGATGTTTACAATGGCAATATATATTGTTTAGAGCTAGCTAA

mRNA sequence

ATGGCCATTTTGGAAAAGGAAGGCTTTGAGATGTGTAGTAATATTAAGGGGCCGGCCATGGGCGGCCGGCTGTGGGGTGCCGAATGGGGGCTGAAGGATACAAGAGGATGGGTGTGGTTGGGGACTTTGACAGCTTGTGGAGAAAAGCCAGCGCAATATGGCAAATGCTTAGAAACTTTCATGTGGAGATGTTTACAATGGCAATATATATTGTTTAGAGCTAGCTAA

Coding sequence (CDS)

ATGGCCATTTTGGAAAAGGAAGGCTTTGAGATGTGTAGTAATATTAAGGGGCCGGCCATGGGCGGCCGGCTGTGGGGTGCCGAATGGGGGCTGAAGGATACAAGAGGATGGGTGTGGTTGGGGACTTTGACAGCTTGTGGAGAAAAGCCAGCGCAATATGGCAAATGCTTAGAAACTTTCATGTGGAGATGTTTACAATGGCAATATATATTGTTTAGAGCTAGCTAA

Protein sequence

MAILEKEGFEMCSNIKGPAMGGRLWGAEWGLKDTRGWVWLGTLTACGEKPAQYGKCLETFMWRCLQWQYILFRAS*
Homology
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BLAST of CSPI05G26820 vs. ExPASy TrEMBL
Match: A0A0A0KR21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157350 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.2e-39
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MAILEKEGFEMCSNIKGPAMGGRLWGAEWGLKDTRGWVWLGTLTACGEKPAQYGKCLETF 60
          MAILEKEGFEMCS+IKGPAMGGRLWGAEWGLKDTRGWVWLGTLTACGEKPAQYGKCLETF
Sbjct: 1  MAILEKEGFEMCSSIKGPAMGGRLWGAEWGLKDTRGWVWLGTLTACGEKPAQYGKCLETF 60

Query: 61 MWRCLQWQYILFRAS 76
          MWRCLQWQYILFRAS
Sbjct: 61 MWRCLQWQYILFRAS 75

The following BLAST results are available for this feature:
BLAST of CSPI05G26820 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G26820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR213.2e-3998.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157350 PE=4 SV=1[more]
BLAST of CSPI05G26820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI05G26820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G26820.1CSPI05G26820.1mRNA