Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAACTCCTTTCTTTCAATGCATTCTACAAGTTTACGTAAAACATCCCCATTATCACTTCCCTAATTTCCTCATATTCTCAAATAATTAAGAACAAAAACAACCTTGATTCCTACTTCGTCCAAGCTTTTGATTTTCTCTTTATATACATTGTTATATATAATCATCAATGGCCACTACCAAGGCGGCTGGTTTGGTGATCTTGGTTTTGTTAATGCTGGATTTGGCTCTTGCTGCTAGGTTCTTCAGGGGTTATGGAGGTGGTAGTGGTGGCGGTGGAGGTGGGGGAGAAGGTTCAGGGCCTTGGTCGGGTTCGGGATATGGTTCAGGGTATGGCTCGGGTTATGGTTCGGGATATGGAGGTGAAGAAGGCTATTCTAGATATGGAGATGAAGGCCGCTATGGACCGTATGGGCCTTATAGTGGGGGTGGAGGTGGCGGTGGAGGAGGTGGTGGTGGAGGTGGCGGCAGTGCAATTGGAGCCGAGTATGGTCGTGGATTTGGGGCGGGAAGTGGGTCGGGGTACGGGTCTGGTGGTGGAGTAGGACGTGGTGGAGGAGGTGGCGGTGGCAGCGGTGGAGGAGGGGGCGGAGGTTCGGGAATTGGAAGTGGGTCAGGATATGGCTCGGGATATGGAAGTGGAGGAGGCTATGGAAGTGGTGGAGGTAGGGGTGGAGGAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGAGGAGGGGGTGGAGGAGGGGGTGGTGGAGGCGGTGGAGGAGGGATGGGCGGAGGAGGGTCTGGGTATGGTTCAGGATATGGGTCAGGGTACGGAGGAGGTGGTGATGAAGAATCACCATGAACGTAATTCGATGGTACCTACAAACGAATTTATCTTTCAAACCATTTGAAATAAAAAAGTGCAATGGCAACTTCTACTTAGAAAGATGATATTAGAATTTGATGGGTTGCGATGGTCCAAAATATAAATTCCTAGTATTACCAAATCCCCTTTCATCTAAATAAATAAATTGCTATCGACCTGTTTTTTTCATTGACGTGCAATTTAATGAATTCTATTCTCTTATTATAATTATATTT
mRNA sequence
ACCAACTCCTTTCTTTCAATGCATTCTACAAGTTTACGTAAAACATCCCCATTATCACTTCCCTAATTTCCTCATATTCTCAAATAATTAAGAACAAAAACAACCTTGATTCCTACTTCGTCCAAGCTTTTGATTTTCTCTTTATATACATTGTTATATATAATCATCAATGGCCACTACCAAGGCGGCTGGTTTGGTGATCTTGGTTTTGTTAATGCTGGATTTGGCTCTTGCTGCTAGGTTCTTCAGGGGTTATGGAGGTGGTAGTGGTGGCGGTGGAGGTGGGGGAGAAGGTTCAGGGCCTTGGTCGGGTTCGGGATATGGTTCAGGGTATGGCTCGGGTTATGGTTCGGGATATGGAGGTGAAGAAGGCTATTCTAGATATGGAGATGAAGGCCGCTATGGACCGTATGGGCCTTATAGTGGGGGTGGAGGTGGCGGTGGAGGAGGTGGTGGTGGAGGTGGCGGCAGTGCAATTGGAGCCGAGTATGGTCGTGGATTTGGGGCGGGAAGTGGGTCGGGGTACGGGTCTGGTGGTGGAGTAGGACGTGGTGGAGGAGGTGGCGGTGGCAGCGGTGGAGGAGGGGGCGGAGGTTCGGGAATTGGAAGTGGGTCAGGATATGGCTCGGGATATGGAAGTGGAGGAGGCTATGGAAGTGGTGGAGGAGGGGGTGGAGGAGGGGGTGGTGGAGGCGGTGGAGGAGGGATGGGCGGAGGAGGGTCTGGGTATGGTTCAGGATATGGGTCAGGGTACGGAGGAGGTGGTGATGAAGAATCACCATGAACGTAATTCGATGGTACCTACAAACGAATTTATCTTTCAAACCATTTGAAATAAAAAAGTGCAATGGCAACTTCTACTTAGAAAGATGATATTAGAATTTGATGGGTTGCGATGGTCCAAAATATAAATTCCTAGTATTACCAAATCCCCTTTCATCTAAATAAATAAATTGCTATCGACCTGTTTTTTTCATTGACGTGCAATTTAATGAATTCTATTCTCTTATTATAATTATATTT
Coding sequence (CDS)
ATGGCCACTACCAAGGCGGCTGGTTTGGTGATCTTGGTTTTGTTAATGCTGGATTTGGCTCTTGCTGCTAGGTTCTTCAGGGGTTATGGAGGTGGTAGTGGTGGCGGTGGAGGTGGGGGAGAAGGTTCAGGGCCTTGGTCGGGTTCGGGATATGGTTCAGGGTATGGCTCGGGTTATGGTTCGGGATATGGAGGTGAAGAAGGCTATTCTAGATATGGAGATGAAGGCCGCTATGGACCGTATGGGCCTTATAGTGGGGGTGGAGGTGGCGGTGGAGGAGGTGGTGGTGGAGGTGGCGGCAGTGCAATTGGAGCCGAGTATGGTCGTGGATTTGGGGCGGGAAGTGGGTCGGGGTACGGGTCTGGTGGTGGAGTAGGACGTGGTGGAGGAGGTGGCGGTGGCAGCGGTGGAGGAGGGGGCGGAGGTTCGGGAATTGGAAGTGGGTCAGGATATGGCTCGGGATATGGAAGTGGAGGAGGCTATGGAAGTGGTGGAGGAGGGGGTGGAGGAGGGGGTGGTGGAGGCGGTGGAGGAGGGATGGGCGGAGGAGGGTCTGGGTATGGTTCAGGATATGGGTCAGGGTACGGAGGAGGTGGTGATGAAGAATCACCATGA
Protein sequence
MATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYGSGGGVGRGGGGGGGSGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGGGGGGGGGGGGGGMGGGGSGYGSGYGSGYGGGGDEESP*
Homology
BLAST of CSPI05G26680 vs. ExPASy Swiss-Prot
Match:
P0C5C7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=GRP0.9 PE=2 SV=1)
HSP 1 Score: 47.8 bits (112), Expect = 1.8e-04
Identity = 123/201 (61.19%), Postives = 130/201 (64.68%), Query Frame = 0
Query: 1 MATTKAAGLVILVLLMLDLALAARFFRGYG-GGSGGGGGGGE-GSGPWSGSGYGSGYGSG 60
MATTK L ILVLL + + +AR GYG GG GGGGGGGE G G + GSGYGSG G G
Sbjct: 1 MATTKHLALAILVLLSIGMTTSARTLLGYGPGGGGGGGGGGEGGGGGYGGSGYGSGSGYG 60
Query: 61 YGSGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSG 120
G G GG G G YG GGGGGGGGG GGG GS G+G+G GSG
Sbjct: 61 EGGGSGGAAG----------GGYG--RGGGGGGGGGEGGGSGS--------GYGSGQGSG 120
Query: 121 YGSG-GGVGRGGGGGGGSGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGGGGGGGGGGGG 180
YG+G GG G G GGGG GG GGG G G GSGYGSGYGSG G GGG G GGGGGGGG
Sbjct: 121 YGAGVGGAGGYGSGGGGGGGQGGGAGGYGQGSGYGSGYGSGAGGAHGGGYGSGGGGGGGG 180
Query: 181 GGMGGGGSGYGSGYGSGYGGG 199
G GG GSG GSGYGSG GGG
Sbjct: 181 GQGGGSGSGSGSGYGSGSGGG 181
BLAST of CSPI05G26680 vs. ExPASy Swiss-Prot
Match:
A3C5A7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRP0.9 PE=2 SV=1)
HSP 1 Score: 47.8 bits (112), Expect = 1.8e-04
Identity = 123/201 (61.19%), Postives = 130/201 (64.68%), Query Frame = 0
Query: 1 MATTKAAGLVILVLLMLDLALAARFFRGYG-GGSGGGGGGGE-GSGPWSGSGYGSGYGSG 60
MATTK L ILVLL + + +AR GYG GG GGGGGGGE G G + GSGYGSG G G
Sbjct: 1 MATTKHLALAILVLLSIGMTTSARTLLGYGPGGGGGGGGGGEGGGGGYGGSGYGSGSGYG 60
Query: 61 YGSGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSG 120
G G GG G G YG GGGGGGGGG GGG GS G+G+G GSG
Sbjct: 61 EGGGSGGAAG----------GGYG--RGGGGGGGGGEGGGSGS--------GYGSGQGSG 120
Query: 121 YGSG-GGVGRGGGGGGGSGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGGGGGGGGGGGG 180
YG+G GG G G GGGG GG GGG G G GSGYGSGYGSG G GGG G GGGGGGGG
Sbjct: 121 YGAGVGGAGGYGSGGGGGGGQGGGAGGYGQGSGYGSGYGSGAGGAHGGGYGSGGGGGGGG 180
Query: 181 GGMGGGGSGYGSGYGSGYGGG 199
G GG GSG GSGYGSG GGG
Sbjct: 181 GQGGGSGSGSGSGYGSGSGGG 181
BLAST of CSPI05G26680 vs. ExPASy TrEMBL
Match:
A0A0A0KUV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622440 PE=4 SV=1)
HSP 1 Score: 248.8 bits (634), Expect = 1.9e-62
Identity = 200/204 (98.04%), Postives = 200/204 (98.04%), Query Frame = 0
Query: 1 MATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYG 60
MATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYG
Sbjct: 1 MATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYG 60
Query: 61 SGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYG 120
SGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYG
Sbjct: 61 SGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYG 120
Query: 121 SGGGVGRGGGGGGGSGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGGGGGGGGGGGGGGM 180
SGGGVGRGGGGGGGSGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGG GGGGGGGGGG
Sbjct: 121 SGGGVGRGGGGGGGSGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGG--- 180
Query: 181 GGGGSGYGSGYGSGYGGGGDEESP 205
GGGGSGYGSGYGSGYGGGGDEESP
Sbjct: 181 GGGGSGYGSGYGSGYGGGGDEESP 201
BLAST of CSPI05G26680 vs. ExPASy TrEMBL
Match:
A0A1S3BGF1 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103489565 PE=4 SV=1)
HSP 1 Score: 218.4 bits (555), Expect = 2.8e-53
Identity = 194/216 (89.81%), Postives = 196/216 (90.74%), Query Frame = 0
Query: 1 MATTKAAGLVILVLLMLDLALAARFFRGY----GGGSGGGGGGGEGS-GPWSGSGYGSGY 60
MATTKA G V+LVLLMLDLALAARFFRGY GGGSGGGGGGGEGS GPW GSGYGSGY
Sbjct: 1 MATTKAVGFVVLVLLMLDLALAARFFRGYGGGGGGGSGGGGGGGEGSGGPWPGSGYGSGY 60
Query: 61 GSGYGSGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGS 120
GSGYGSGYGGEEGYSRYGDEG YGPYG YSGGGGGGGGGGGGGGGSAIGAEYGRGFG G
Sbjct: 61 GSGYGSGYGGEEGYSRYGDEG-YGPYGRYSGGGGGGGGGGGGGGGSAIGAEYGRGFGMGG 120
Query: 121 GSGYGSGGGVGRGGGGGGGSGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGG-------GG 180
GSGYGSGGGVGRGGGGGGGSGGGGGGGSG+GSGSGYGSGYGSGGGYGSGGG GG
Sbjct: 121 GSGYGSGGGVGRGGGGGGGSGGGGGGGSGVGSGSGYGSGYGSGGGYGSGGGRGGGGGVGG 180
Query: 181 GGGGGGGGGGGMGGGGSGYGSGYGSGYGGGGDEESP 205
GGGGGGGGGGGM GGGSGYGSGYGSGYGGGGDEESP
Sbjct: 181 GGGGGGGGGGGM-GGGSGYGSGYGSGYGGGGDEESP 214
BLAST of CSPI05G26680 vs. ExPASy TrEMBL
Match:
A0A6J1JQB8 (putative glycine-rich cell wall structural protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111487374 PE=4 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 1.3e-39
Identity = 178/212 (83.96%), Postives = 182/212 (85.85%), Query Frame = 0
Query: 1 MATTKAAGLVILVLLMLDLALAARFFRGY----GGGSGGGGGGGEGSGPWSGSGYGSGYG 60
MAT A GLV+LVLLM DL LAARF RGY GGGSGGGGGGGEGS PWSGSGYGSGYG
Sbjct: 1 MATNGAIGLVLLVLLMADLTLAARFLRGYGGGGGGGSGGGGGGGEGSRPWSGSGYGSGYG 60
Query: 61 SGYGSGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSG 120
SGYGSGY G+ GY RYGDEG YGPYG SGGGGGGGGGGGGGGGSA GA YG+GFG+GSG
Sbjct: 61 SGYGSGY-GDGGYPRYGDEG-YGPYG--SGGGGGGGGGGGGGGGSANGAGYGQGFGSGSG 120
Query: 121 SGYGSGGGVGRGGGGGGGS--GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGGGGGGGGG 180
SGYGSGGGVGRGGGGGGG GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGG GGGGGGG
Sbjct: 121 SGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGG 180
Query: 181 GGGGGMG------GGGSGYGSGYGSGYGGGGD 201
GGGGG G GGGSGYGSGYGSGYGGGGD
Sbjct: 181 GGGGGGGGGGEGMGGGSGYGSGYGSGYGGGGD 208
BLAST of CSPI05G26680 vs. ExPASy TrEMBL
Match:
A0A6J1CF67 (putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3673 GN=LOC111010186 PE=4 SV=1)
HSP 1 Score: 130.2 bits (326), Expect = 1.0e-26
Identity = 136/176 (77.27%), Postives = 146/176 (82.95%), Query Frame = 0
Query: 2 ATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGS 61
++T+A GLV+LVLLM+DL LAAR RGYGGG+GGGGGGGEG GP SGSGYGSGYGSGYGS
Sbjct: 4 SSTRAIGLVVLVLLMVDLTLAARSLRGYGGGTGGGGGGGEGFGP-SGSGYGSGYGSGYGS 63
Query: 62 GYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYGS 121
G+ G+E Y Y YGPYGPY GGGGGGGGGGGGGG A GA YGRGF GSGYGS
Sbjct: 64 GF-GDEAYEPYEP---YGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGF----GSGYGS 123
Query: 122 GGGVGRGGGGGGGS--GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGGGGGGGGGG 176
GGG+GRGGGGGGG GGGGGGGSG GSGSGYGSGYGSGGGYG+G G GGGGGGGG
Sbjct: 124 GGGIGRGGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGRGGGGGGGG 170
BLAST of CSPI05G26680 vs. ExPASy TrEMBL
Match:
A0A5J5RR49 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D04G024600v1 PE=4 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 3.9e-15
Identity = 140/214 (65.42%), Postives = 155/214 (72.43%), Query Frame = 0
Query: 1 MATTKAAGLVILVLLMLDLALAARFFR--GYGGGSGGGGGGGEGSGPWSGSGYGSGYGSG 60
M + + G + LVLL++DLA AAR F+ G GGG+GGGGGGG G G +G G GSGYGSG
Sbjct: 1 MGSCRVIGALFLVLLLVDLAFAARSFKAVGKGGGAGGGGGGGSGGGGANGLGSGSGYGSG 60
Query: 61 YGSGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSG 120
YGSG G S YG G YG GGGGGGGGGGGGGGGS+ G+ G G+G+GSGSG
Sbjct: 61 YGSGSG-----SGYGS----GAYGSGGGGGGGGGGGGGGGGGSS-GSGSGSGYGSGSGSG 120
Query: 121 YGSGGGVGRGGGGGGGSGGGGGGGSGIGSGSGY--GSGYGSGGGYGSGGGGGGGGGGGGG 180
YGSGGG+G GGGGGGG GGGGGGG G G GSGY GSGYGSG GYGSGGG GGGGGGGGG
Sbjct: 121 YGSGGGIGGGGGGGGGRGGGGGGGGGNGGGSGYGSGSGYGSGSGYGSGGGRGGGGGGGGG 180
Query: 181 GGGMGGGGSGYGSGY--------GSGYGGGGDEE 203
GGG GGGG G GSGY GSGYG GD++
Sbjct: 181 GGGGGGGGGGNGSGYGSGSGYGSGSGYGSSGDDD 204
BLAST of CSPI05G26680 vs. NCBI nr
Match:
XP_031741764.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])
HSP 1 Score: 249.6 bits (636), Expect = 2.3e-62
Identity = 202/204 (99.02%), Postives = 202/204 (99.02%), Query Frame = 0
Query: 1 MATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYG 60
MATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYG
Sbjct: 1 MATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYG 60
Query: 61 SGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYG 120
SGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYG
Sbjct: 61 SGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYG 120
Query: 121 SGGGVGRGGGGGGGSGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGGGGGGGGGGGGGGM 180
SGGGVGRGGGGGGGSGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGG GGGGGGGGGGGG
Sbjct: 121 SGGGVGRGGGGGGGSGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGG- 180
Query: 181 GGGGSGYGSGYGSGYGGGGDEESP 205
GGGGSGYGSGYGSGYGGGGDEESP
Sbjct: 181 GGGGSGYGSGYGSGYGGGGDEESP 203
BLAST of CSPI05G26680 vs. NCBI nr
Match:
XP_008447018.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo])
HSP 1 Score: 218.4 bits (555), Expect = 5.8e-53
Identity = 194/216 (89.81%), Postives = 196/216 (90.74%), Query Frame = 0
Query: 1 MATTKAAGLVILVLLMLDLALAARFFRGY----GGGSGGGGGGGEGS-GPWSGSGYGSGY 60
MATTKA G V+LVLLMLDLALAARFFRGY GGGSGGGGGGGEGS GPW GSGYGSGY
Sbjct: 1 MATTKAVGFVVLVLLMLDLALAARFFRGYGGGGGGGSGGGGGGGEGSGGPWPGSGYGSGY 60
Query: 61 GSGYGSGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGS 120
GSGYGSGYGGEEGYSRYGDEG YGPYG YSGGGGGGGGGGGGGGGSAIGAEYGRGFG G
Sbjct: 61 GSGYGSGYGGEEGYSRYGDEG-YGPYGRYSGGGGGGGGGGGGGGGSAIGAEYGRGFGMGG 120
Query: 121 GSGYGSGGGVGRGGGGGGGSGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGG-------GG 180
GSGYGSGGGVGRGGGGGGGSGGGGGGGSG+GSGSGYGSGYGSGGGYGSGGG GG
Sbjct: 121 GSGYGSGGGVGRGGGGGGGSGGGGGGGSGVGSGSGYGSGYGSGGGYGSGGGRGGGGGVGG 180
Query: 181 GGGGGGGGGGGMGGGGSGYGSGYGSGYGGGGDEESP 205
GGGGGGGGGGGM GGGSGYGSGYGSGYGGGGDEESP
Sbjct: 181 GGGGGGGGGGGM-GGGSGYGSGYGSGYGGGGDEESP 214
BLAST of CSPI05G26680 vs. NCBI nr
Match:
XP_023550088.1 (glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 180.6 bits (457), Expect = 1.3e-41
Identity = 178/212 (83.96%), Postives = 182/212 (85.85%), Query Frame = 0
Query: 1 MATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYG 60
MATT A GLV+LVLLM DL LAARF RGYGGGSGGGGGGGEGS PWSGSGYGSGYGSGYG
Sbjct: 1 MATTGAIGLVLLVLLMADLTLAARFLRGYGGGSGGGGGGGEGSRPWSGSGYGSGYGSGYG 60
Query: 61 SGYGGEEGYSRYGDE--GRYGPYGPY--SGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSG 120
SGY G+ GY RYGDE G YGPYGPY GGGGGGGGGGGGGGG A GA YG GFG+GSG
Sbjct: 61 SGY-GDGGYPRYGDEGYGPYGPYGPYGSGGGGGGGGGGGGGGGGGANGAGYGHGFGSGSG 120
Query: 121 SGYGSGGGVGRGGGGGGGS--GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGGGGGGGGG 180
SGYGSGGGVGRGGGGGGG GGGGGGGSGIGSGSGYGSGYGSGGGYG+GGG GGGGGGG
Sbjct: 121 SGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGNGGGRGGGGGGG 180
Query: 181 GGGGGMG------GGGSGYGSGYGSGYGGGGD 201
GGGGG G GGGSGYGSGYGSGYGGGGD
Sbjct: 181 GGGGGGGGGGEGMGGGSGYGSGYGSGYGGGGD 211
BLAST of CSPI05G26680 vs. NCBI nr
Match:
KAG6601193.1 (hypothetical protein SDJN03_06426, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 175.6 bits (444), Expect = 4.3e-40
Identity = 177/213 (83.10%), Postives = 181/213 (84.98%), Query Frame = 0
Query: 1 MATTKAAGLVILVLLMLDLALAARFFRGY----GGGSGGGGGGGEGSGPWSGSGYGSGYG 60
MATT GLV+LVLLM DL LAARF RGY GGGSGGGGGGGEGS PWSGSGYGSGYG
Sbjct: 1 MATTGTIGLVLLVLLMADLTLAARFLRGYGGGGGGGSGGGGGGGEGSRPWSGSGYGSGYG 60
Query: 61 SGYGSGYGGEEGYSRYGDEGRYGPYGPY-SGGGGGGGGGGGGGGGSAIGAEYGRGFGAGS 120
SGYGSGY G+ GY RYGDE YGPYGPY SGGGGGGGGGGGGGGG A GA YG GFG+GS
Sbjct: 61 SGYGSGY-GDGGYPRYGDE-EYGPYGPYGSGGGGGGGGGGGGGGGGANGAGYGHGFGSGS 120
Query: 121 GSGYGSGGGVGRGGGGGGGS--GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGGGGGGGG 180
GSGYGSGGGVGRGGGGGGG GGGGGGGSGIGSGSGYGSGYGSGGGYG+GGG GGGGGG
Sbjct: 121 GSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGNGGGRGGGGGG 180
Query: 181 GGGGGGMG------GGGSGYGSGYGSGYGGGGD 201
GGGGGG G GGGSGYGSGYGSGYGGGGD
Sbjct: 181 GGGGGGGGGGGEGMGGGSGYGSGYGSGYGGGGD 211
BLAST of CSPI05G26680 vs. NCBI nr
Match:
XP_022990525.1 (putative glycine-rich cell wall structural protein 1 [Cucurbita maxima])
HSP 1 Score: 172.9 bits (437), Expect = 2.8e-39
Identity = 178/212 (83.96%), Postives = 182/212 (85.85%), Query Frame = 0
Query: 1 MATTKAAGLVILVLLMLDLALAARFFRGY----GGGSGGGGGGGEGSGPWSGSGYGSGYG 60
MAT A GLV+LVLLM DL LAARF RGY GGGSGGGGGGGEGS PWSGSGYGSGYG
Sbjct: 1 MATNGAIGLVLLVLLMADLTLAARFLRGYGGGGGGGSGGGGGGGEGSRPWSGSGYGSGYG 60
Query: 61 SGYGSGYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSG 120
SGYGSGY G+ GY RYGDEG YGPYG SGGGGGGGGGGGGGGGSA GA YG+GFG+GSG
Sbjct: 61 SGYGSGY-GDGGYPRYGDEG-YGPYG--SGGGGGGGGGGGGGGGSANGAGYGQGFGSGSG 120
Query: 121 SGYGSGGGVGRGGGGGGGS--GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGGGGGGGGG 180
SGYGSGGGVGRGGGGGGG GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGG GGGGGGG
Sbjct: 121 SGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGG 180
Query: 181 GGGGGMG------GGGSGYGSGYGSGYGGGGD 201
GGGGG G GGGSGYGSGYGSGYGGGGD
Sbjct: 181 GGGGGGGGGGEGMGGGSGYGSGYGSGYGGGGD 208
BLAST of CSPI05G26680 vs. TAIR 10
Match:
AT2G36120.1 (Glycine-rich protein family )
HSP 1 Score: 42.4 bits (98), Expect = 5.3e-04
Identity = 112/183 (61.20%), Postives = 118/183 (64.48%), Query Frame = 0
Query: 28 GYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGSGYGGEEGYSRYGDEGRYGPYGPYSGG 87
G GGG GGG GGG G GP G GYG G G G G+GYGG G G + GG
Sbjct: 83 GGGGGHGGGAGGGGGGGP--GGGYGGGSGEGGGAGYGG-------------GEAGGHGGG 142
Query: 88 GGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYGSGGGVGRGGGGGGGSGGGGGGGSGIGS 147
GGGG GGGGGGGG A G YG G GAG+G GYG GG G GGGGGGG+GGGGGGGSG G
Sbjct: 143 GGGGAGGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGGSGEGG 202
Query: 148 --GSGYGSGYGSGGGYGSGGGGGGGGGGGGGGGGMGGGGSGYG-----SGYGSGYGGGGD 204
G GYG+G G+G GYG G G GG GGGGGGGGG GGGG G G SGYG G G GG
Sbjct: 203 AHGGGYGAGGGAGEGYGGGAGAGGHGGGGGGGGGSGGGGGGGGGYAAASGYGHGGGAGGG 250
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P0C5C7 | 1.8e-04 | 61.19 | Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. indica OX=399... | [more] |
| A3C5A7 | 1.8e-04 | 61.19 | Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. japonica OX=3... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KUV7 | 1.9e-62 | 98.04 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622440 PE=4 SV=1 | [more] |
| A0A1S3BGF1 | 2.8e-53 | 89.81 | glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
| A0A6J1JQB8 | 1.3e-39 | 83.96 | putative glycine-rich cell wall structural protein 1 OS=Cucurbita maxima OX=3661... | [more] |
| A0A6J1CF67 | 1.0e-26 | 77.27 | putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3... | [more] |
| A0A5J5RR49 | 3.9e-15 | 65.42 | Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D04G024600v1 PE... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_031741764.1 | 2.3e-62 | 99.02 | glycine-rich cell wall structural protein 2 [Cucumis sativus] | [more] |
| XP_008447018.1 | 5.8e-53 | 89.81 | PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo] | [more] |
| XP_023550088.1 | 1.3e-41 | 83.96 | glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo] | [more] |
| KAG6601193.1 | 4.3e-40 | 83.10 | hypothetical protein SDJN03_06426, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022990525.1 | 2.8e-39 | 83.96 | putative glycine-rich cell wall structural protein 1 [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G36120.1 | 5.3e-04 | 61.20 | Glycine-rich protein family | [more] |
