CSPI05G26230 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G26230
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr5: 25166051 .. 25172723 (-)
RNA-Seq Expression	CSPI05G26230
Synteny	CSPI05G26230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAATATCCAAAAAGAAAAAGGAAAATCTTAATTTAGGAGATTGGAAGTTCTAAGTTCGTACCTGTGATAGCTGCATGAAACAAAAGCATTAGGCAAAGGAAAGATAAAAGATAATGGATGTTCGTTCACTCTCAAACGCCACCACCACCACCTCATCCACCGTCTTTTCCTCACATCGCCGCCGCCGTCACCATTATTCTCACCCTTCTCCCGCCATAATCATCTTCTCGTTGAAGCCACCGTCTCCGCCGACGCCGTCTCGTTCAGATTCTGATGATTCTTCCAGTTCAGACCCCTCGCTCTCCGGCCGCATCCGTCGCCCCCAAACCCTAAAGACCACTTCCTCTCCTAAACGTACTACCTCCCAAGTTCCCTCTAACCCTCTCAGGAATTTGGTCGGCTCAGCCTATGTTCCTATTCTTCCTCCGCCACCACCTCCGCCACCCCCTGTTTCCCACTCGCTCTCTGAAAAGCTTTGGCTCTCGAGTAAACTCTCGCCACCACCTCCCCCGATTTCTGAGTTATTGGAGGAAGACCGAAATGAAATTGAAGAAATTGAATCCGATAATTCTTCAAGTAAGGGGCGGAGAGAAGTTCAATTCCGTCAAGAGGGTAAGATTTTTGTCGGGAACTTGCCTAATTGGATAAAGAAGCATGAGGTCCAAGAGTTTTTCCGGCAGTTTGGTCCTGTGAAGAATGTGATATTGATTAAAGGTCACAATGCTGTGGAAAGAAATGCAGGGTACGGATTCATCATATACGATGGGCTAACTGCAGACAAGTCGGCCATTAAGGCCGTTGAATTTGACGGTGTGGAATTTCACGGACGGGTTTTGACTGTGAAATTGGACGATGGGAGGAGGTTAAAGGAGAAGACGGATGAGAGGGCGAGATGGATGGAGGGAGATGACAGCGTGGAGTATCGTTCCCATTGGCATGAAGAGAGGGATAAAGCACGAAATGGCCTTCGCAAGGTTATTGAGACAGAGCCAGAGAACTGGCAGGCGGTTGTATCGGCTTTCGAGAGGATCAAGAAGGTAGTTTCTTGAATTCCTTTGAAATTTTTTTGAATTAGCGGGTTCTGAATTGTGCGAATTTTCTAATATAGACGAGAATAATTTATATGTAAATTGACTAGGATTGTTTCTCAGATTGTGCGTCTGATATTCTAGTCAATTTTTATTACCATAGTTCTGGCCAACTTGGCAAGGTTGGCTGGAACTATGGTATAGTGTGGCCACTTTAAACTGATAGTCTACAACAAATTAAGGAATACTTTTGGAATAAATTTCTAGTATTCATACGTAGTTATATCTTATAACTGAGAGTTCAAGATTTCCCATTAGTTTTGGACTTTGCCGTAAGAGTTACAAACAAGCTGTGTACTTATATATTGGTATAACAAAGTATCATCGTGCCTAGTTGAATTCATTCATTCAAACTTGTGACAATTATGATATGTTACGTTCATGAGCATGAGTGTAAGCAAGCTTTGAGTCATCTCAAATTCACCTTCTGCTGAATTTTATATACAAAAAGTAAAAAGTCTGAATTTGAGCATTTTCATATTAATTGTTTTGATATCTTTTGTTGTTTCGGGATGAAATCTACTATCATTAAGCCTTCTAGGAAAGAGTATGGTTTGATGGTGAATTACTACGCAAGGAGAGGTGATATGCACCGTGCACGTGAAACCTTTGAAAAGATGCGAGCTAGGGGAATAGAACCATCGTCTCATGTCTACACAAAGTAATAACTATTCCTATTTTCCCCCTTTTCTTTTGTCATTTGTTAATTTGATCTCAATGTTAGCTTAATATTTTTGCTTCATTTATTGACACAAAGGTCACCATTCCAGTTTTGAATGGTTAAAGTTCGATTGATTTGTACAGAAGTTTAGTTGAGTATTTTATGCTTGAAATAGATATTCTGATGGTAGCTATGTCATTGCCAAAGTATATGTACTATATTAATACAATCTAAATTTTTTTTTCAACTGTGTCGTCTTGTGATAACAGTAAGCTTTAATGATGTGCAGCCTTATTCATGCTTATGCAGTTGGCAGAGACATGGAAGAAGCACTATCTTGTGTTAGAAAAATGAAAGAAGAAGGCATAGAAATGAGCTTGGTAACTTACAGCATTCTTGTGGGTGGATTTGCCAAAACGGGAAATGCAGAGTAAGTAATTGCGTAGGTTCATAAAATTTTCGTTATATATACACATGTTCATATATACGTATATATTTCTTTTGCATTTATATATACATATACATACATATGTATATATTTCTTTTGCTTTAATTGTCAGGAAGCTGGACTACTATATTGTATGGTAGAAAGTAGAAAAAAAACCCTTAACTTGGCCCTATTGTAAAAGAACTGAGCTTTCATTCATTTGTGACTATTTAAGTTTATTATTTGTAGCTTGTAATCATGCGGTGGTCCTCTTCATTGTGAGGGTTCCACGGTAATGGTCCTTGCAAATTTGCAGAACAGCGTCAAGGGTTGCCTTTATCCAGCTGCCTTATGGTTGAGCTTATGAAGGACGCATTTTTTTTCTCTGTAATTTCTAGTCTTTTAAATTTTTTTCTCTGTTTCTATACCCATGGACATGATTCATAATTCATTTTCTCTTTGCATCTGTTTTGTCTAAATTGTATTACATTTGCATTTGTCTTGGAAGATCTGCAGATCACTGGTTTCAGGAGGCCAAAGAGAAACACTCTTCATTGAATGCAATCATTTATGGGAATATCATATATGCTTACTGGTAATTTCATGTCAATCGACTTTAATTATTATAGAAATGGCAAATGTGTTCCTTGTGTTTATGTCGTCAAGTCTGTGTTTTCTTTGATTATTTGCTACAAGGGACATACCATTATATGTACTAATTAGTTTTGGCTCCAGTCAAAGATGCAATATGGATAAAGCTGAAGCTTTGGTAAGGGAAATGGAAGAAGAAGGCATAGATGCTCCAATTGACATATATCACACCATGATGGATGGCTATACAATGATTGGTGATGAGGACAAGTGTCTGCTTGTGTTTGAAAGATTTAAGGTACAGTGCCTGTGTAAAGTTACTCTCGTTTGTTTTTTTATTAATTTTTGGGGGCTTGGTGGTGGTGGTAATGGCCGTTTTTGTTATCATTCTTTGGTGGAATATTTGTATATAATATTCGAACAAGTCAGTTCAGATGGCCTTGATTGCATTGGTCGAAAGAATTTTGGTCTCCTATATATATGAATCCCAAAGAAATTATTGAGAAAGTCAATTTCAGAAGCCGCATGGGCTGCACCACTTGGATTAAAATGATGGTGACAAGCATTTCATGGGAAAATTTTGTATTGGCTAGGAAGGTTTGAAGTGAAATATGAAAAAGAAAGAGAAGAGCACTTGTGAAGTTTAGTTAGGGCTCAGTTGTTTATATGGATCTGTACTTAGCATTCTGTATCTGGGTTAGCATGGCCTTTACTTCTTCGGTGATGAAATAATTTTGTCATTAGTGTTTACTACATCATCTTTAGACCTCTCATTTCTTCTAACTATGATGCAGGAATGTGGTTTGAATCCTTCAGTCATTACTTATGGATGTCTCATTAATCTTTACGCAAAGGTAAATTATGTTTTTTAGTCCCCTTTGTTATTTATCATATTGTCATATTGTATGGCTAAATATTTAGAAGGAAATGAAGCATAATGTTAGTTTGTACCCGTTTCCTGTTTTCTTTCCCTTCTTTCTTCCTGTGTTTGGCCTGGCCTCACCACAATTTTCTTTCAAGATGACAGTGAGTAGTCTAATAATGGACATGTTGTTTTGATTTATATCAGAAGGAAGAAAAAAAAAAACGAAAAAAGATAACATAAATAACTATTGCTATTTTCTCACGTTCATTTTTACATAGTACTACATCAGGTTACAGATTCTCTTTTATTATTATTTTTTACCCTTTTTTCATCATTCTTTCAGCTTGGGAAAGTTTCTAAAGCTTTAGAAGTTAGCAAAGAAATGGAACATGCTGGCATAAAGCACAACATGAAGACCTACTCCATGTTGATCAATGGGTTCTTGAAGTTGAAAGATTGGGCTAATGCTTTTGCTATTTTTGAAGATTTGATAAAGGATGGTATTAAGCCTGATGTAGTACTCTATAATAATATCATCACGGCATTTTGTGGGATGGGGAAGATGGATCGTGCTGTCTGTACTGTCAAGGAAATGCAGAAGCAGAGGCACAAACCCACAACTCGAACATTTATGCCCATCATACATGGTTTTGCAAGGAAAGGAGAAATCAAGAAGGCGCTGGATGTATTTGATATGATGCGGATGTCTGGATGCATTCCAACTGTGCACACCTATAATGCTCTGATTCTTGGTCTTGTTGAGAAGCGCAAGGTAATCCTCTCAAATGACTGCTATGTAACGTTCCATGCCTTGGGAGGTTTCTTTCTAACCATAGCTCCCACAGAGTTACTCTAGTAGTAGTTTTAAGCGTAGTAGTTACTCTACAGGTAATCCTGACTTTTCTTTAAATGGTGGCCCCAAAAAGTGGGGTCCTCGAAATCTTTCGCACCTCTATGGAATGCTGACTCCATCCAACTTCTCATATTCATGAAATTAATTTTAGATGGACGTTCACATTTTAATTTGCCAGATCCTAACTTCACTCGTTGTTATAATCTTTTTATAAACTTCTGGTGGAGTTTCTTACTTCCTTTCCATTTTATAGTATGATTGTTGATCCATAATTTCAGTGTAGTAGTTCAATGCTTGGGAAATTTCTCTTTTTCCAGATGGAGAAGGCTGAACAAATACTGGATGAGATGACGTTAGCTGGTGTAAGTCCAAATGAACACACATACACAACCATCATGCATGGTTATGCTTCTTTAGGCGATACAGGAAAAGCATTCGCTTACTTCACTAAACTGAGGGATGAGGGTCTGCAGCTTGATGTTTATACATATGAAGCATTGCTCAAAGCATGCTGCAAATCAGGCAGAATGCAGAGTGCATTGGCAGTCACCAAGGAAATGAGTGCTCAAAATATTCCAAGAAACACCTTCATTTATAACATTTTAATTGACGGGTATGCCATCCTAGATGTATTAGTTTCTGATTATTTTGATGTTTCACTCTTGTAATACATTGAATTAATTATCTTTTTCCATGTAGATGGGCTCGACGAGGCGACGTTTGGGAGGCAGCTGATCTAATGCAACAAATGAAACGAGAAGGGGTTCAACCTGACATCCATACATACACGTCCTTCATTAATGCTTGTTCCAAGGCTGGAGATATGCAGGTATCCTGCTAAAATAGCACATCTTTTTTAGTTTATAGAACCCGCTTAACCTGTCTTTGTTCATAGAACAAACTTATTCGTCTATTCAAAAGTTAAAACTAAGCTTTTACTGAGATAAGCGAGGATACGGATTGGACCAATATAAAAAGAACAAAAGCTCACTGCAAAAAGGACTCCAATTGGGTTTGAGGGAATGAAACAACGTGAAAATTATGAAAAGGACTCTAATTTTTGTTTTCTTATGAAATATTGGGCTGAGGAAAACAGTAAATTTTTTAAAGTTTTAGGAGTCCTTGGTAAAAGTAAAATGTGCGGTGGCCTATGCCTAGATTTTACAGCTCTAAGCATTTTGGTAACTATCCTTCCACTCATATTTAGTTAGTATTTTAGGTTCATCAAACACCATCCCTTCATCAATCCTTCCATTTAACTACTATCTTGGCATGTTTCCAATTCTAACCGGTTAACCATTTTCCAGAGAGCAACAAAAACAATTGAAGAAATGAAATCTGTAGGAGTGAAGCCTAATGTTAAAACATATACTACACTGATTAATGGTTGGGCCCGTGCCTCATTACCAGAGAAGGCACTATCATGTTTTGAAGAGATGAAGCTATCTGGGTTAAAACCAGACAGAGCTGTTTACCATTGTCTGATGACGTCGTTACTTTCGAGGGCCACTGTTGCACATGGATGCATTTACCCTGGCATTCTTTCTGTTTGTAGAGAGATGGTTGATTGTGAACTAACAGTGGATATGGGAACAGCAGTTCACTGGTCCAAGTGTTTGCTCAAAATTGAGAGAACTGGTGGGGAGATTACTGAAGCCTTGCAGAAGACCTTCCCTCCAAACTGGAATGTGTATAATAATACCCTCACTAACTCCAACATAGACTCGGACGACGAATCCGACATAAGTGACGACGAGGATGATGACATATGCCAGGAGGGAGCATCATCTAATGCTGGTGATGATGGTGAAAGCGATGGCGATGTAGTTGGCAGATCATGGTTTTGAGAGCCTGCAAATAGAATCCCACTGTTCAATGGTTAGTAGTTTGGTTTGGCCCTACTACTTTATTCACGGAGCCAACCATTTGGGTTGAAATTACATTCTTTTATGTATAGGCTTTTCAATTTGTAATAGTTCCCTATGTAAATCTATTGGGGTACTTCCTGTTTAAAAGACAGTACACTAGTGGAAGGAACGGTGAAAACTGAAAACTTAAAAAGGGCAAATCAAACTTGAGAGATTCAAAGGTTTGATTTGTTACTCAGAAGTGTAGGTTTTAACCAGTTTGACTATGTGACCGAATTGGTTATAACAAAATGGTATTGAGATTTATCTTCCTAAGC

mRNA sequence

TGAAAATATCCAAAAAGAAAAAGGAAAATCTTAATTTAGGAGATTGGAAGTTCTAAGTTCGTACCTGTGATAGCTGCATGAAACAAAAGCATTAGGCAAAGGAAAGATAAAAGATAATGGATGTTCGTTCACTCTCAAACGCCACCACCACCACCTCATCCACCGTCTTTTCCTCACATCGCCGCCGCCGTCACCATTATTCTCACCCTTCTCCCGCCATAATCATCTTCTCGTTGAAGCCACCGTCTCCGCCGACGCCGTCTCGTTCAGATTCTGATGATTCTTCCAGTTCAGACCCCTCGCTCTCCGGCCGCATCCGTCGCCCCCAAACCCTAAAGACCACTTCCTCTCCTAAACGTACTACCTCCCAAGTTCCCTCTAACCCTCTCAGGAATTTGGTCGGCTCAGCCTATGTTCCTATTCTTCCTCCGCCACCACCTCCGCCACCCCCTGTTTCCCACTCGCTCTCTGAAAAGCTTTGGCTCTCGAGTAAACTCTCGCCACCACCTCCCCCGATTTCTGAGTTATTGGAGGAAGACCGAAATGAAATTGAAGAAATTGAATCCGATAATTCTTCAAGTAAGGGGCGGAGAGAAGTTCAATTCCGTCAAGAGGGTAAGATTTTTGTCGGGAACTTGCCTAATTGGATAAAGAAGCATGAGGTCCAAGAGTTTTTCCGGCAGTTTGGTCCTGTGAAGAATGTGATATTGATTAAAGGTCACAATGCTGTGGAAAGAAATGCAGGGTACGGATTCATCATATACGATGGGCTAACTGCAGACAAGTCGGCCATTAAGGCCGTTGAATTTGACGGTGTGGAATTTCACGGACGGGTTTTGACTGTGAAATTGGACGATGGGAGGAGGTTAAAGGAGAAGACGGATGAGAGGGCGAGATGGATGGAGGGAGATGACAGCGTGGAGTATCGTTCCCATTGGCATGAAGAGAGGGATAAAGCACGAAATGGCCTTCGCAAGGTTATTGAGACAGAGCCAGAGAACTGGCAGGCGGTTGTATCGGCTTTCGAGAGGATCAAGAAGCCTTCTAGGAAAGAGTATGGTTTGATGGTGAATTACTACGCAAGGAGAGGTGATATGCACCGTGCACGTGAAACCTTTGAAAAGATGCGAGCTAGGGGAATAGAACCATCGTCTCATGTCTACACAAACCTTATTCATGCTTATGCAGTTGGCAGAGACATGGAAGAAGCACTATCTTGTGTTAGAAAAATGAAAGAAGAAGGCATAGAAATGAGCTTGGTAACTTACAGCATTCTTGTGGGTGGATTTGCCAAAACGGGAAATGCAGAATCTGCAGATCACTGGTTTCAGGAGGCCAAAGAGAAACACTCTTCATTGAATGCAATCATTTATGGGAATATCATATATGCTTACTGTCAAAGATGCAATATGGATAAAGCTGAAGCTTTGGTAAGGGAAATGGAAGAAGAAGGCATAGATGCTCCAATTGACATATATCACACCATGATGGATGGCTATACAATGATTGGTGATGAGGACAAGTGTCTGCTTGTGTTTGAAAGATTTAAGGAATGTGGTTTGAATCCTTCAGTCATTACTTATGGATGTCTCATTAATCTTTACGCAAAGCTTGGGAAAGTTTCTAAAGCTTTAGAAGTTAGCAAAGAAATGGAACATGCTGGCATAAAGCACAACATGAAGACCTACTCCATGTTGATCAATGGGTTCTTGAAGTTGAAAGATTGGGCTAATGCTTTTGCTATTTTTGAAGATTTGATAAAGGATGGTATTAAGCCTGATGTAGTACTCTATAATAATATCATCACGGCATTTTGTGGGATGGGGAAGATGGATCGTGCTGTCTGTACTGTCAAGGAAATGCAGAAGCAGAGGCACAAACCCACAACTCGAACATTTATGCCCATCATACATGGTTTTGCAAGGAAAGGAGAAATCAAGAAGGCGCTGGATGTATTTGATATGATGCGGATGTCTGGATGCATTCCAACTGTGCACACCTATAATGCTCTGATTCTTGGTCTTGTTGAGAAGCGCAAGATGGAGAAGGCTGAACAAATACTGGATGAGATGACGTTAGCTGGTGTAAGTCCAAATGAACACACATACACAACCATCATGCATGGTTATGCTTCTTTAGGCGATACAGGAAAAGCATTCGCTTACTTCACTAAACTGAGGGATGAGGGTCTGCAGCTTGATGTTTATACATATGAAGCATTGCTCAAAGCATGCTGCAAATCAGGCAGAATGCAGAGTGCATTGGCAGTCACCAAGGAAATGAGTGCTCAAAATATTCCAAGAAACACCTTCATTTATAACATTTTAATTGACGGATGGGCTCGACGAGGCGACGTTTGGGAGGCAGCTGATCTAATGCAACAAATGAAACGAGAAGGGGTTCAACCTGACATCCATACATACACGTCCTTCATTAATGCTTGTTCCAAGGCTGGAGATATGCAGAGAGCAACAAAAACAATTGAAGAAATGAAATCTGTAGGAGTGAAGCCTAATGTTAAAACATATACTACACTGATTAATGGTTGGGCCCGTGCCTCATTACCAGAGAAGGCACTATCATGTTTTGAAGAGATGAAGCTATCTGGGTTAAAACCAGACAGAGCTGTTTACCATTGTCTGATGACGTCGTTACTTTCGAGGGCCACTGTTGCACATGGATGCATTTACCCTGGCATTCTTTCTGTTTGTAGAGAGATGGTTGATTGTGAACTAACAGTGGATATGGGAACAGCAGTTCACTGGTCCAAGTGTTTGCTCAAAATTGAGAGAACTGGTGGGGAGATTACTGAAGCCTTGCAGAAGACCTTCCCTCCAAACTGGAATGTGTATAATAATACCCTCACTAACTCCAACATAGACTCGGACGACGAATCCGACATAAGTGACGACGAGGATGATGACATATGCCAGGAGGGAGCATCATCTAATGCTGGTGATGATGGTGAAAGCGATGGCGATGTAGTTGGCAGATCATGGTTTTGAGAGCCTGCAAATAGAATCCCACTGTTCAATGGTTAGTAGTTTGGTTTGGCCCTACTACTTTATTCACGGAGCCAACCATTTGGGTTGAAATTACATTCTTTTATGTATAGGCTTTTCAATTTGTAATAGTTCCCTATGTAAATCTATTGGGGTACTTCCTGTTTAAAAGACAGTACACTAGTGGAAGGAACGGTGAAAACTGAAAACTTAAAAAGGGCAAATCAAACTTGAGAGATTCAAAGGTTTGATTTGTTACTCAGAAGTGTAGGTTTTAACCAGTTTGACTATGTGACCGAATTGGTTATAACAAAATGGTATTGAGATTTATCTTCCTAAGC

Coding sequence (CDS)

ATGGATGTTCGTTCACTCTCAAACGCCACCACCACCACCTCATCCACCGTCTTTTCCTCACATCGCCGCCGCCGTCACCATTATTCTCACCCTTCTCCCGCCATAATCATCTTCTCGTTGAAGCCACCGTCTCCGCCGACGCCGTCTCGTTCAGATTCTGATGATTCTTCCAGTTCAGACCCCTCGCTCTCCGGCCGCATCCGTCGCCCCCAAACCCTAAAGACCACTTCCTCTCCTAAACGTACTACCTCCCAAGTTCCCTCTAACCCTCTCAGGAATTTGGTCGGCTCAGCCTATGTTCCTATTCTTCCTCCGCCACCACCTCCGCCACCCCCTGTTTCCCACTCGCTCTCTGAAAAGCTTTGGCTCTCGAGTAAACTCTCGCCACCACCTCCCCCGATTTCTGAGTTATTGGAGGAAGACCGAAATGAAATTGAAGAAATTGAATCCGATAATTCTTCAAGTAAGGGGCGGAGAGAAGTTCAATTCCGTCAAGAGGGTAAGATTTTTGTCGGGAACTTGCCTAATTGGATAAAGAAGCATGAGGTCCAAGAGTTTTTCCGGCAGTTTGGTCCTGTGAAGAATGTGATATTGATTAAAGGTCACAATGCTGTGGAAAGAAATGCAGGGTACGGATTCATCATATACGATGGGCTAACTGCAGACAAGTCGGCCATTAAGGCCGTTGAATTTGACGGTGTGGAATTTCACGGACGGGTTTTGACTGTGAAATTGGACGATGGGAGGAGGTTAAAGGAGAAGACGGATGAGAGGGCGAGATGGATGGAGGGAGATGACAGCGTGGAGTATCGTTCCCATTGGCATGAAGAGAGGGATAAAGCACGAAATGGCCTTCGCAAGGTTATTGAGACAGAGCCAGAGAACTGGCAGGCGGTTGTATCGGCTTTCGAGAGGATCAAGAAGCCTTCTAGGAAAGAGTATGGTTTGATGGTGAATTACTACGCAAGGAGAGGTGATATGCACCGTGCACGTGAAACCTTTGAAAAGATGCGAGCTAGGGGAATAGAACCATCGTCTCATGTCTACACAAACCTTATTCATGCTTATGCAGTTGGCAGAGACATGGAAGAAGCACTATCTTGTGTTAGAAAAATGAAAGAAGAAGGCATAGAAATGAGCTTGGTAACTTACAGCATTCTTGTGGGTGGATTTGCCAAAACGGGAAATGCAGAATCTGCAGATCACTGGTTTCAGGAGGCCAAAGAGAAACACTCTTCATTGAATGCAATCATTTATGGGAATATCATATATGCTTACTGTCAAAGATGCAATATGGATAAAGCTGAAGCTTTGGTAAGGGAAATGGAAGAAGAAGGCATAGATGCTCCAATTGACATATATCACACCATGATGGATGGCTATACAATGATTGGTGATGAGGACAAGTGTCTGCTTGTGTTTGAAAGATTTAAGGAATGTGGTTTGAATCCTTCAGTCATTACTTATGGATGTCTCATTAATCTTTACGCAAAGCTTGGGAAAGTTTCTAAAGCTTTAGAAGTTAGCAAAGAAATGGAACATGCTGGCATAAAGCACAACATGAAGACCTACTCCATGTTGATCAATGGGTTCTTGAAGTTGAAAGATTGGGCTAATGCTTTTGCTATTTTTGAAGATTTGATAAAGGATGGTATTAAGCCTGATGTAGTACTCTATAATAATATCATCACGGCATTTTGTGGGATGGGGAAGATGGATCGTGCTGTCTGTACTGTCAAGGAAATGCAGAAGCAGAGGCACAAACCCACAACTCGAACATTTATGCCCATCATACATGGTTTTGCAAGGAAAGGAGAAATCAAGAAGGCGCTGGATGTATTTGATATGATGCGGATGTCTGGATGCATTCCAACTGTGCACACCTATAATGCTCTGATTCTTGGTCTTGTTGAGAAGCGCAAGATGGAGAAGGCTGAACAAATACTGGATGAGATGACGTTAGCTGGTGTAAGTCCAAATGAACACACATACACAACCATCATGCATGGTTATGCTTCTTTAGGCGATACAGGAAAAGCATTCGCTTACTTCACTAAACTGAGGGATGAGGGTCTGCAGCTTGATGTTTATACATATGAAGCATTGCTCAAAGCATGCTGCAAATCAGGCAGAATGCAGAGTGCATTGGCAGTCACCAAGGAAATGAGTGCTCAAAATATTCCAAGAAACACCTTCATTTATAACATTTTAATTGACGGATGGGCTCGACGAGGCGACGTTTGGGAGGCAGCTGATCTAATGCAACAAATGAAACGAGAAGGGGTTCAACCTGACATCCATACATACACGTCCTTCATTAATGCTTGTTCCAAGGCTGGAGATATGCAGAGAGCAACAAAAACAATTGAAGAAATGAAATCTGTAGGAGTGAAGCCTAATGTTAAAACATATACTACACTGATTAATGGTTGGGCCCGTGCCTCATTACCAGAGAAGGCACTATCATGTTTTGAAGAGATGAAGCTATCTGGGTTAAAACCAGACAGAGCTGTTTACCATTGTCTGATGACGTCGTTACTTTCGAGGGCCACTGTTGCACATGGATGCATTTACCCTGGCATTCTTTCTGTTTGTAGAGAGATGGTTGATTGTGAACTAACAGTGGATATGGGAACAGCAGTTCACTGGTCCAAGTGTTTGCTCAAAATTGAGAGAACTGGTGGGGAGATTACTGAAGCCTTGCAGAAGACCTTCCCTCCAAACTGGAATGTGTATAATAATACCCTCACTAACTCCAACATAGACTCGGACGACGAATCCGACATAAGTGACGACGAGGATGATGACATATGCCAGGAGGGAGCATCATCTAATGCTGGTGATGATGGTGAAAGCGATGGCGATGTAGTTGGCAGATCATGGTTTTGA

Protein sequence

MDVRSLSNATTTTSSTVFSSHRRRRHHYSHPSPAIIIFSLKPPSPPTPSRSDSDDSSSSDPSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSEKLWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIKKHEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHGRVLTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVVSAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEIKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITEALQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESDGDVVGRSWF*

Homology

[Close]

BLAST of CSPI05G26230 vs. ExPASy Swiss-Prot
Match: Q0WMY5 (Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPR4 PE=1 SV=1)

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 624/945 (66.03%), Postives = 755/945 (79.89%), Query Frame = 0


Query: 30  HPSPAIIIFSLK--PPSPPTPSRSDSDDSSSSDPSLSGRIRRPQTLKTTSSPKRTTSQVP 89
           H   A I FSLK  PP PP P  S  D            +RRP+    +SS   + S +P
Sbjct: 25  HSPVASISFSLKQPPPQPPEPPESPPD------------LRRPEKSIGSSSSSSSPSPIP 84

Query: 90  S-------NPLRNLVGSAYVPILPPPPPPPPPVS--HSLSEKLWLSSKLS-PPPPPISEL 149
           S       NPL+ L   + V  L          S   SL+ KL LSSKLS PPPPP    
Sbjct: 85  SPKTPLKINPLKGLTNRSSVSPLVQSEVSSKVSSFGSSLASKLRLSSKLSPPPPPPPPPP 144

Query: 150 LEEDRNEIEEIESDNSSSKGRR---EVQFRQEGKIFVGNLPNWIKKHEVQEFFRQFGPVK 209
           +EE     +E  SD    +      + +FRQEGKIFVGNLP WIKK E +EFFRQFGP++
Sbjct: 145 VEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIFVGNLPTWIKKPEFEEFFRQFGPIE 204

Query: 210 NVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHGRVLTVKLDDGRRLKEK 269
           NVILIKGH+ VE+NAG+GFIIY    A+KSA+KAVEFDGVEFHGR+LTVKLDDG+RLK K
Sbjct: 205 NVILIKGHHEVEKNAGFGFIIY---AAEKSAMKAVEFDGVEFHGRILTVKLDDGKRLKTK 264

Query: 270 TDERARWM---EGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVVSAFERIKKPSR 329
            ++R RW+   E D  +  +S WH+ER+ +R  L+++++T  +NWQAV+SAFE+I KPSR
Sbjct: 265 AEQRVRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSR 324

Query: 330 KEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRK 389
            E+GLMV +Y RRGDMHRARETFE+MRARGI P+S +YT+LIHAYAVGRDM+EALSCVRK
Sbjct: 325 TEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRK 384

Query: 390 MKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCN 449
           MKEEGIEMSLVTYS++VGGF+K G+AE+AD+WF EAK  H +LNA IYG IIYA+CQ CN
Sbjct: 385 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 444

Query: 450 MDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKECGLNPSVITYGC 509
           M++AEALVREMEEEGIDAPI IYHTMMDGYTM+ DE K L+VF+R KECG  P+V+TYGC
Sbjct: 445 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 504

Query: 510 LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 569
           LINLY K+GK+SKALEVS+ M+  G+KHN+KTYSM+INGF+KLKDWANAFA+FED++K+G
Sbjct: 505 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 564

Query: 570 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEIKKAL 629
           +KPDV+LYNNII+AFCGMG MDRA+ TVKEMQK RH+PTTRTFMPIIHG+A+ G+++++L
Sbjct: 565 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 624

Query: 630 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGY 689
           +VFDMMR  GC+PTVHT+N LI GLVEKR+MEKA +ILDEMTLAGVS NEHTYT IM GY
Sbjct: 625 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 684

Query: 690 ASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 749
           AS+GDTGKAF YFT+L++EGL +D++TYEALLKACCKSGRMQSALAVTKEMSA+NIPRN+
Sbjct: 685 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 744

Query: 750 FIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEE 809
           F+YNILIDGWARRGDVWEAADL+QQMK+EGV+PDIHTYTSFI+ACSKAGDM RAT+TIEE
Sbjct: 745 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 804

Query: 810 MKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRAT 869
           M+++GVKPN+KTYTTLI GWARASLPEKALSC+EEMK  G+KPD+AVYHCL+TSLLSRA+
Sbjct: 805 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 864

Query: 870 VAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITEALQKTFPPNWNV 929
           +A   IY G++++C+EMV+  L VDMGTAVHWSKCL KIE +GGE+TE LQKTFPP+W+ 
Sbjct: 865 IAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETLQKTFPPDWSS 924

Query: 930 YNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESDGDV 957
           ++    + +   D  SD+  DEDD           G+DGE D DV
Sbjct: 925 HH----HHHGFLDQVSDVDSDEDD---------VDGEDGEDDEDV 941

[Close]

BLAST of CSPI05G26230 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 3.4e-66
Identity = 136/496 (27.42%), Postives = 246/496 (49.60%), Query Frame = 0


Query: 314 YGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
           Y + +N + RR  +  A     KM   G EP     ++L++ Y   + + +A++ V +M 
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 374 EEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433
           E G +    T++ L+ G      A  A     +  ++    + + YG ++   C+R ++D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKECGLNPSVITYGCLI 493
            A +L+++ME+  I+A + IY+T++DG       D  L +F      G+ P V TY  LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300

Query: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553
           +     G+ S A  +  +M    I  N+ T+S LI+ F+K      A  +++++IK  I 
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 554 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEIKKALDV 613
           PD+  Y+++I  FC   ++D A    + M  +   P   T+  +I GF +   +++ +++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420

Query: 614 FDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYAS 673
           F  M   G +    TY  LI G  + R  + A+ +  +M   GV PN  TY  ++ G   
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480

Query: 674 LGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 733
            G   KA   F  L+   ++ D+YTY  +++  CK+G+++    +   +S + +  N   
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540

Query: 734 YNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 793
           YN +I G+ R+G   EA  L+++MK +G  P+  TY + I A  + GD + + + I+EM+
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600

Query: 794 SVGVKPNVKTYTTLIN 810
           S G   +  T   + N
Sbjct: 601 SCGFAGDASTIGLVTN 616

[Close]

BLAST of CSPI05G26230 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 246.5 bits (628), Expect = 1.2e-63
Identity = 137/496 (27.62%), Postives = 248/496 (50.00%), Query Frame = 0


Query: 314 YGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
           Y +++N + RR  +  A     KM   G EP     ++L++ Y  G+ + EA++ V +M 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177

Query: 374 EEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433
               + + VT++ L+ G      A  A         +    +   YG ++   C+R ++D
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237

Query: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKECGLNPSVITYGCLI 493
            A +L+++ME+  I+A + IY T++D      + +  L +F      G+ P+V+TY  LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297

Query: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553
                 G+ S A  +  +M    I  N+ T+S LI+ F+K      A  +++++IK  I 
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 554 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEIKKALDV 613
           PD+  Y+++I  FC   ++D A    + M  +   P   T+  +I GF +   +++ +++
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 614 FDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYAS 673
           F  M   G +    TYN LI GL +    + A++I  +M   GV P+  TY+ ++ G   
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 674 LGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 733
            G   KA   F  L+   ++ D+YTY  +++  CK+G+++    +   +S + +  N  I
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537

Query: 734 YNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 793
           Y  +I G+ R+G   EA  L ++MK +G  P+  TY + I A  + GD   + + I+EM+
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597

Query: 794 SVGVKPNVKTYTTLIN 810
           S G   +  T + +IN
Sbjct: 598 SCGFVGDASTISMVIN 613

[Close]

BLAST of CSPI05G26230 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.6e-63
Identity = 152/544 (27.94%), Postives = 263/544 (48.35%), Query Frame = 0


Query: 326 DMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYS 385
           D+ RA+E    M A G + +   Y  LI      + + EA+   + +  + ++  +VTY 
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301

Query: 386 ILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEE 445
            LV G  K    E       E      S +     +++    +R  +++A  LV+ + + 
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361

Query: 446 GIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKA 505
           G+   + +Y+ ++D         +  L+F+R  + GL P+ +TY  LI+++ + GK+  A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421

Query: 506 LEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITA 565
           L    EM   G+K ++  Y+ LING  K  D + A     ++I   ++P VV Y +++  
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481

Query: 566 FCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEIKKALDVFDMMRMSGCIPT 625
           +C  GK+++A+    EM  +   P+  TF  ++ G  R G I+ A+ +F+ M      P 
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541

Query: 626 VHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFT 685
             TYN +I G  E+  M KA + L EMT  G+ P+ ++Y  ++HG    G   +A  +  
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601

Query: 686 KLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRG 745
            L     +L+   Y  LL   C+ G+++ AL+V +EM  + +  +   Y +LIDG  +  
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661

Query: 746 DVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYT 805
           D      L+++M   G++PD   YTS I+A SK GD + A    + M + G  PN  TYT
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721

Query: 806 TLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSL------LSRATVAHGCIYP 864
            +ING  +A    +A     +M+     P++  Y C +  L      + +A   H  I  
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK 781

[Close]

BLAST of CSPI05G26230 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 246.1 bits (627), Expect = 1.6e-63
Identity = 136/496 (27.42%), Postives = 247/496 (49.80%), Query Frame = 0


Query: 314 YGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
           Y +++N + RR  +  A     KM   G EP+    ++L++ Y   + + EA++ V +M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 374 EEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433
             G + + VT++ L+ G      A  A         K    + + YG ++   C+R + D
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKECGLNPSVITYGCLI 493
            A  L+ +ME+  ++  + IY+T++DG       D  L +F+  +  G+ P+V+TY  LI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553
           +     G+ S A  +  +M    I  ++ T+S LI+ F+K      A  ++++++K  I 
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 554 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEIKKALDV 613
           P +V Y+++I  FC   ++D A    + M  +   P   T+  +I GF +   +++ ++V
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418

Query: 614 FDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYAS 673
           F  M   G +    TYN LI GL +    + A++I  EM   GV PN  TY T++ G   
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478

Query: 674 LGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 733
            G   KA   F  L+   ++  +YTY  +++  CK+G+++    +   +S + +  +   
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538

Query: 734 YNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 793
           YN +I G+ R+G   EA  L ++MK +G  P+   Y + I A  + GD + + + I+EM+
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598

Query: 794 SVGVKPNVKTYTTLIN 810
           S G   +  T   + N
Sbjct: 599 SCGFAGDASTIGLVTN 614

[Close]

BLAST of CSPI05G26230 vs. ExPASy TrEMBL
Match: A0A5D3CFW5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001920 PE=3 SV=1)

HSP 1 Score: 1871.3 bits (4846), Expect = 0.0e+00
Identity = 931/963 (96.68%), Postives = 950/963 (98.65%), Query Frame = 0


Query: 1   MDVRSLSNATTTTSSTVFSSHRRR-RHHYSHPSPAIIIFSLKPPSPPTPSRSDSDDSSSS 60
           MDVRSLSNATTTTSSTVFSSHRRR  HHYSHP PA+I+FSLKPPSPPTP RSDSDDSSSS
Sbjct: 1   MDVRSLSNATTTTSSTVFSSHRRRHHHHYSHPPPAVILFSLKPPSPPTPPRSDSDDSSSS 60

Query: 61  DPSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE 120
            PSLSGRIRRPQTLKTTSSPKRT+SQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE
Sbjct: 61  SPSLSGRIRRPQTLKTTSSPKRTSSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE 120

Query: 121 KLWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIK 180
           KLWLSSKLSPPPPPISELLEED+NEIEEIE++NSSSKGRREVQFRQEGK+FVGNLPNWIK
Sbjct: 121 KLWLSSKLSPPPPPISELLEEDQNEIEEIETENSSSKGRREVQFRQEGKVFVGNLPNWIK 180

Query: 181 KHEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHGR 240
           KHEVQEFFRQFGPVKNVILIKGHNA ERNAGYGFIIYDG TA KSAIKAVEFDGVEFHGR
Sbjct: 181 KHEVQEFFRQFGPVKNVILIKGHNATERNAGYGFIIYDGPTAAKSAIKAVEFDGVEFHGR 240

Query: 241 VLTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAV 300
           VLTVKLDDGRRLKEKT+ERARWMEGDDSVEYRSHWHEERDKARNG RKVIETEPENWQAV
Sbjct: 241 VLTVKLDDGRRLKEKTNERARWMEGDDSVEYRSHWHEERDKARNGFRKVIETEPENWQAV 300

Query: 301 VSAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVG 360
           VSAF+RIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVG
Sbjct: 301 VSAFDRIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVG 360

Query: 361 RDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIY 420
           RDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAK GNAESADHWFQEAKEKHSS+NAIIY
Sbjct: 361 RDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAESADHWFQEAKEKHSSMNAIIY 420

Query: 421 GNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKE 480
           GNIIYAYCQRCNMD+AEALVREMEEEGIDAPIDIYHTMMDGYTM+GDE+KCLLVFERFKE
Sbjct: 421 GNIIYAYCQRCNMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKE 480

Query: 481 CGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN 540
           CGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKT+SMLINGFLKLKDWAN
Sbjct: 481 CGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTFSMLINGFLKLKDWAN 540

Query: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIH 600
           AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIH
Sbjct: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIH 600

Query: 601 GFARKGEIKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSP 660
           GFARKGE+KKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSP
Sbjct: 601 GFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSP 660

Query: 661 NEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVT 720
           NEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGL LDVYTYEALLKACCKSGRMQSALAVT
Sbjct: 661 NEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLGLDVYTYEALLKACCKSGRMQSALAVT 720

Query: 721 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKA 780
           KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKA
Sbjct: 721 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKA 780

Query: 781 GDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVY 840
           GDMQRATKTIEEMKSVGVKPNVKTYTTLI+GWARASLPEKALSCFEEMKLSGLKPD+AVY
Sbjct: 781 GDMQRATKTIEEMKSVGVKPNVKTYTTLIHGWARASLPEKALSCFEEMKLSGLKPDKAVY 840

Query: 841 HCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITE 900
           HCLMTSLLSRATVA GCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITE
Sbjct: 841 HCLMTSLLSRATVAQGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITE 900

Query: 901 ALQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESDGDVVGR 960
           ALQKTFPPNWN+YNNTLT+SNIDSDDESDISDDEDDDICQ GASSNAGDDGESDGDVVGR
Sbjct: 901 ALQKTFPPNWNLYNNTLTSSNIDSDDESDISDDEDDDICQGGASSNAGDDGESDGDVVGR 960

Query: 961 SWF 963
           SWF
Sbjct: 961 SWF 963

[Close]

BLAST of CSPI05G26230 vs. ExPASy TrEMBL
Match: A0A0A0KTE3 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G613570 PE=3 SV=1)

HSP 1 Score: 1868.6 bits (4839), Expect = 0.0e+00
Identity = 935/962 (97.19%), Postives = 941/962 (97.82%), Query Frame = 0


Query: 1   MDVRSLSNATTTTSSTVFSSHRRRRHHYSHPSPAIIIFSLKPPSPPTPSRSDSDDSSSSD 60
           MDVRSLSNATTTTSSTVFSSHRRRRHHY+HPSPAII+FSLKPPSPPTPSRSDSDDSSSSD
Sbjct: 1   MDVRSLSNATTTTSSTVFSSHRRRRHHYAHPSPAIILFSLKPPSPPTPSRSDSDDSSSSD 60

Query: 61  PSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSEK 120
           PSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSEK
Sbjct: 61  PSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSEK 120

Query: 121 LWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIKK 180
           LWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIKK
Sbjct: 121 LWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIKK 180

Query: 181 HEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHGRV 240
           HEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHGRV
Sbjct: 181 HEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHGRV 240

Query: 241 LTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVV 300
           LTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVV
Sbjct: 241 LTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVV 300

Query: 301 SAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGR 360
           SAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYT          
Sbjct: 301 SAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYT---------- 360

Query: 361 DMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYG 420
                    +KMKEEGIEMSLVTYSILV GFAKTGNAESADHWFQEAKEKHSSLNAIIYG
Sbjct: 361 ---------KKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYG 420

Query: 421 NIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKEC 480
           NIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTM+GDEDKCLLVFERFKEC
Sbjct: 421 NIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKEC 480

Query: 481 GLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANA 540
           GLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANA
Sbjct: 481 GLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANA 540

Query: 541 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHG 600
           FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHG
Sbjct: 541 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHG 600

Query: 601 FARKGEIKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPN 660
           FARKGE+KKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPN
Sbjct: 601 FARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPN 660

Query: 661 EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 720
           EHTYTTIMHGYASLGDTGKAF YFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK
Sbjct: 661 EHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 720

Query: 721 EMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAG 780
           EMSAQNIPRNTFIYNILIDGWARRGD+WEAADLMQQMKREGVQPDIHTYTSFINACSKAG
Sbjct: 721 EMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAG 780

Query: 781 DMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYH 840
           DMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYH
Sbjct: 781 DMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYH 840

Query: 841 CLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITEA 900
           CLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITEA
Sbjct: 841 CLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITEA 900

Query: 901 LQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESDGDVVGRS 960
           LQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESDGDVVGRS
Sbjct: 901 LQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESDGDVVGRS 943

Query: 961 WF 963
           WF
Sbjct: 961 WF 943

[Close]

BLAST of CSPI05G26230 vs. ExPASy TrEMBL
Match: A0A1S3BFB6 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489379 PE=3 SV=1)

HSP 1 Score: 1861.7 bits (4821), Expect = 0.0e+00
Identity = 930/969 (95.98%), Postives = 949/969 (97.94%), Query Frame = 0


Query: 1   MDVRSLSNATTTTSSTVFSSHRRR-RHHYSHPSPAIIIFSLKPPSPPTPSRSDSDDSSSS 60
           MDVRSLSNATTTTSSTVFSSHRRR  HHYSHP PA+I+FSLKPPSPPTP RSDSDDSSSS
Sbjct: 14  MDVRSLSNATTTTSSTVFSSHRRRHHHHYSHPPPAVILFSLKPPSPPTPPRSDSDDSSSS 73

Query: 61  DPSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE 120
            PSLSGRIRRPQTLKTTSSPKRT+SQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE
Sbjct: 74  SPSLSGRIRRPQTLKTTSSPKRTSSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE 133

Query: 121 KLWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIK 180
           KLWLSSKLSPPPPPISELLEED+NEIEEIE++NSSSKGRREVQFRQEGK+FVGNLPNWIK
Sbjct: 134 KLWLSSKLSPPPPPISELLEEDQNEIEEIETENSSSKGRREVQFRQEGKVFVGNLPNWIK 193

Query: 181 KHEVQEFFRQFGPVKNVILIKGHNAVERNAG------YGFIIYDGLTADKSAIKAVEFDG 240
           KHEVQEFFRQFGPVKNVILIKGHNA ERNAG       GFIIYDG TA KSAIKAVEFDG
Sbjct: 194 KHEVQEFFRQFGPVKNVILIKGHNATERNAGXXXXXXXGFIIYDGPTAAKSAIKAVEFDG 253

Query: 241 VEFHGRVLTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEP 300
           VEFHGRVLTVKLDDGRRLKEKT+ERARWMEGDDSVEYRSHWHEERDKARNG RKVIETEP
Sbjct: 254 VEFHGRVLTVKLDDGRRLKEKTNERARWMEGDDSVEYRSHWHEERDKARNGFRKVIETEP 313

Query: 301 ENWQAVVSAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLI 360
           ENWQAVVSAF+RIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLI
Sbjct: 314 ENWQAVVSAFDRIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLI 373

Query: 361 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSS 420
           HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAK GNAESADHWFQEAKEKHSS
Sbjct: 374 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAESADHWFQEAKEKHSS 433

Query: 421 LNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLV 480
           +NAIIYGNIIYAYCQRCNMD+AEALVREMEEEGIDAPIDIYHTMMDGYTM+GDE+KCLLV
Sbjct: 434 MNAIIYGNIIYAYCQRCNMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLV 493

Query: 481 FERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLK 540
           FERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKT+SMLINGFLK
Sbjct: 494 FERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTFSMLINGFLK 553

Query: 541 LKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT 600
           LKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT
Sbjct: 554 LKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT 613

Query: 601 FMPIIHGFARKGEIKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 660
           FMPIIHGFARKGE+KKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT
Sbjct: 614 FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 673

Query: 661 LAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQ 720
           LAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGL LDVYTYEALLKACCKSGRMQ
Sbjct: 674 LAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLGLDVYTYEALLKACCKSGRMQ 733

Query: 721 SALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFI 780
           SALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFI
Sbjct: 734 SALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFI 793

Query: 781 NACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLK 840
           NACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLI+GWARASLPEKALSCFEEMKLSGLK
Sbjct: 794 NACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLIHGWARASLPEKALSCFEEMKLSGLK 853

Query: 841 PDRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERT 900
           PD+AVYHCLMTSLLSRATVA GCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERT
Sbjct: 854 PDKAVYHCLMTSLLSRATVAQGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERT 913

Query: 901 GGEITEALQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESD 960
           GGEITEALQKTFPPNWN+YNNTLT+SNIDSDDESDISDDEDDDICQ GASSNAGDDGESD
Sbjct: 914 GGEITEALQKTFPPNWNLYNNTLTSSNIDSDDESDISDDEDDDICQGGASSNAGDDGESD 973

Query: 961 GDVVGRSWF 963
           GDVVGRSWF
Sbjct: 974 GDVVGRSWF 982

[Close]

BLAST of CSPI05G26230 vs. ExPASy TrEMBL
Match: A0A6J1D9Q6 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018664 PE=4 SV=1)

HSP 1 Score: 1724.5 bits (4465), Expect = 0.0e+00
Identity = 871/974 (89.43%), Postives = 916/974 (94.05%), Query Frame = 0


Query: 1   MDVRSLSNATTTTSSTVFSS---HRRRRHHYSHPSPAIIIFSLKPPSPP---TPS-RSDS 60
           MD RSLSN TTTTSS  FS+   HRRR  H+SHPS A+IIFSLKPP PP   +PS RSDS
Sbjct: 1   MDARSLSNTTTTTSSACFSAVLPHRRR--HHSHPSSAVIIFSLKPPLPPPHHSPSPRSDS 60

Query: 61  DDSSSSDPSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPP- 120
           DDSSSS PSLSGRIRRPQTLKTTSSPKRTTS+VPSNPL+NLVGSAYVP+LPPPPPPPPP 
Sbjct: 61  DDSSSSTPSLSGRIRRPQTLKTTSSPKRTTSKVPSNPLKNLVGSAYVPVLPPPPPPPPPP 120

Query: 121 ---VSHSLSEKLWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKI 180
              VS+SLS KLWLSSKLSPPPPP SE  +ED NE+EEI ++NSSSKGR E++ RQEGKI
Sbjct: 121 PPHVSYSLSNKLWLSSKLSPPPPPTSEASDEDENEVEEIVTENSSSKGRGEIELRQEGKI 180

Query: 181 FVGNLPNWIKKHEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAV 240
           FVGNLP+WIKKHE+QEFFRQFGPVKNVILIKGH+A ERNAGYGF+IYDGLTA KSA+KAV
Sbjct: 181 FVGNLPSWIKKHELQEFFRQFGPVKNVILIKGHDATERNAGYGFVIYDGLTAAKSAMKAV 240

Query: 241 EFDGVEFHGRVLTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVI 300
           EFDGVEFHGRVLTVKLDDGRRLKEKT+ERARWMEGDDSVEYRS WHEERDKARNG RKVI
Sbjct: 241 EFDGVEFHGRVLTVKLDDGRRLKEKTEERARWMEGDDSVEYRSQWHEERDKARNGFRKVI 300

Query: 301 ETEPENWQAVVSAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVY 360
           ETEPENWQAVV AFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEP+SHVY
Sbjct: 301 ETEPENWQAVVWAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPTSHVY 360

Query: 361 TNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKE 420
           TNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAK  NAESADHWFQEAKE
Sbjct: 361 TNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMRNAESADHWFQEAKE 420

Query: 421 KHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDK 480
           KHSSLNAIIYGNIIYAYCQ CNM++AEALVR+MEEEGIDAPIDIYHTMMDGYTMIGDEDK
Sbjct: 421 KHSSLNAIIYGNIIYAYCQTCNMERAEALVRQMEEEGIDAPIDIYHTMMDGYTMIGDEDK 480

Query: 481 CLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLIN 540
           CLLVFERFKECGLNPSVITYGCLINLY KLGKV+KALEVSKEMEHAGIKHNMKTYSMLIN
Sbjct: 481 CLLVFERFKECGLNPSVITYGCLINLYTKLGKVAKALEVSKEMEHAGIKHNMKTYSMLIN 540

Query: 541 GFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKP 600
           GFLKLKDWANAFAIFEDLI+DGIKPDVVLYNNIITAFCGMGKMDRA+CTVKEMQKQRH+P
Sbjct: 541 GFLKLKDWANAFAIFEDLIRDGIKPDVVLYNNIITAFCGMGKMDRAICTVKEMQKQRHRP 600

Query: 601 TTRTFMPIIHGFARKGEIKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL 660
           TTRTFMPIIHGFARKGE++KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKA +IL
Sbjct: 601 TTRTFMPIIHGFARKGEMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEIL 660

Query: 661 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKS 720
           DEMTL+GVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLR EGL+LDVYTYEALLKACCKS
Sbjct: 661 DEMTLSGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRSEGLELDVYTYEALLKACCKS 720

Query: 721 GRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTY 780
           GRMQSALAVTKEMSAQ IPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTY
Sbjct: 721 GRMQSALAVTKEMSAQKIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTY 780

Query: 781 TSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKL 840
           TSFINACSKAGDMQRATKTIEEM+SVGVKPNVKTYTTLI+GWARASLPE ALSCFEEMKL
Sbjct: 781 TSFINACSKAGDMQRATKTIEEMRSVGVKPNVKTYTTLIHGWARASLPENALSCFEEMKL 840

Query: 841 SGLKPDRAVYHCLMTSLLSRATV-AHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLL 900
           SGLKPD+AVYHCLMTSLLSRATV A G IYPGILSVCREMVD  LTVDMGTAVHWSKCL 
Sbjct: 841 SGLKPDKAVYHCLMTSLLSRATVAAEGSIYPGILSVCREMVDSGLTVDMGTAVHWSKCLR 900

Query: 901 KIERTGGEITEALQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGD 960
           KIERTGGEITEALQKTFPPNWN Y+N LT+S++D++DESD+SD  DDDIC  G  SNA +
Sbjct: 901 KIERTGGEITEALQKTFPPNWNSYDNALTSSSVDAEDESDVSD--DDDIC-HGGVSNADE 960

Query: 961 DGESDGDVVGRSWF 963
           D E+D DVVGRSWF
Sbjct: 961 DDENDDDVVGRSWF 969

[Close]

BLAST of CSPI05G26230 vs. ExPASy TrEMBL
Match: A0A6J1FZV7 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449427 PE=3 SV=1)

HSP 1 Score: 1684.5 bits (4361), Expect = 0.0e+00
Identity = 851/967 (88.00%), Postives = 901/967 (93.17%), Query Frame = 0


Query: 1   MDVRSLSNATTTTSSTVFSSHRRRRHHYSHPSPAIIIFSLK-PPSPPTPSRSDSDDSSSS 60
           MDVRSLSNAT+TTSS VF    RRRHH+SHPS A+I+ SLK PP PP PSRSDSDDSS S
Sbjct: 1   MDVRSLSNATSTTSSAVFPP-PRRRHHHSHPSSALIVISLKRPPPPPPPSRSDSDDSSGS 60

Query: 61  DPSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPI--LPPPPPPPPPVSHSL 120
             S+SGRIRRPQ LKT+SSPKRTTS+VPSNPL+NLVGSA VP+  LPPPPPPP PVSHSL
Sbjct: 61  TASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANVPVLPLPPPPPPPLPVSHSL 120

Query: 121 SEKLWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNW 180
            +KLWLSSKLSPPPPPI+E+ EED +E EEIE+++SSS+GRREVQFRQEGKIFVGNLPNW
Sbjct: 121 GDKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNW 180

Query: 181 IKKHEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFH 240
           IKKHEVQ+FFRQFGPV NVILIKGH+  +RNAGYGF+IYDG TA KSA+KAVEFDGVEFH
Sbjct: 181 IKKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAAKSAMKAVEFDGVEFH 240

Query: 241 GRVLTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQ 300
           GRVL+VKLDDGRRLKEK  ERA+WMEGDDSVE+RS WHEERDKAR G R VIETEPE+WQ
Sbjct: 241 GRVLSVKLDDGRRLKEKAYERAKWMEGDDSVEFRSQWHEERDKARKGFRMVIETEPEDWQ 300

Query: 301 AVVSAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYA 360
           AVVSAFERIKKPSRKEY LMVNYYARRGDMHRARETFEKMRARGIEP++HVYTNLIHAYA
Sbjct: 301 AVVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTTHVYTNLIHAYA 360

Query: 361 VGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAI 420
           VGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAK GNAE+ADHWFQEAKEKH SLNAI
Sbjct: 361 VGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH-SLNAI 420

Query: 421 IYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERF 480
           IYGNIIYAYCQ CNMD+AEALVR+MEEEGIDAPIDIYHTMMDGYTM+GDE KCLLVFERF
Sbjct: 421 IYGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERF 480

Query: 481 KECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDW 540
           KECGLNPSVITYGCLINLY KLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDW
Sbjct: 481 KECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDW 540

Query: 541 ANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPI 600
           ANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH+PTTRTFMPI
Sbjct: 541 ANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPI 600

Query: 601 IHGFARKGEIKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGV 660
           IHGFAR+G+++KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKA +ILDEMTLAGV
Sbjct: 601 IHGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGV 660

Query: 661 SPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALA 720
           +PNEHTYTTIMHGYASLGDTGKAF YFTKLRDEGL+LDVYTYEALLKACCKSGRMQSALA
Sbjct: 661 NPNEHTYTTIMHGYASLGDTGKAFVYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALA 720

Query: 721 VTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACS 780
           VTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADL+QQMK+EGVQPDIHTYTSFINACS
Sbjct: 721 VTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACS 780

Query: 781 KAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRA 840
           KAGDMQRATKTI EMKS GVKPN+KTYTTLI+GWARASLPEKALSCF EMKLSGLKPD+A
Sbjct: 781 KAGDMQRATKTIVEMKSAGVKPNIKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKA 840

Query: 841 VYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEI 900
           VYHCLMTSLLSRATVA G IYPGILSVC+EMVD  LTVDMGTAVHWSKCL KIERTGGEI
Sbjct: 841 VYHCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEI 900

Query: 901 TEALQKTFPPNWNVYNNTLTNSNIDSDDESDISDD--EDDDICQEGASSNAGDDGESDGD 960
           TEALQKTFPPNWN YNN   +S++DSDDE  ISDD  EDDDICQE   S+A DD     D
Sbjct: 901 TEALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEV-SDARDD-----D 959

Query: 961 VVGRSWF 963
           VVGRSWF
Sbjct: 961 VVGRSWF 959

[Close]

BLAST of CSPI05G26230 vs. NCBI nr
Match: XP_004135367.2 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic [Cucumis sativus] >KAE8648815.1 hypothetical protein Csa_007917 [Cucumis sativus])

HSP 1 Score: 1919.1 bits (4970), Expect = 0.0e+00
Identity = 955/962 (99.27%), Postives = 960/962 (99.79%), Query Frame = 0


Query: 1   MDVRSLSNATTTTSSTVFSSHRRRRHHYSHPSPAIIIFSLKPPSPPTPSRSDSDDSSSSD 60
           MDVRSLSNATTTTSSTVFSSHRRRRHHY+HPSPAII+FSLKPPSPPTPSRSDSDDSSSSD
Sbjct: 1   MDVRSLSNATTTTSSTVFSSHRRRRHHYAHPSPAIILFSLKPPSPPTPSRSDSDDSSSSD 60

Query: 61  PSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSEK 120
           PSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSEK
Sbjct: 61  PSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSEK 120

Query: 121 LWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIKK 180
           LWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIKK
Sbjct: 121 LWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIKK 180

Query: 181 HEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHGRV 240
           HEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHGRV
Sbjct: 181 HEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHGRV 240

Query: 241 LTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVV 300
           LTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVV
Sbjct: 241 LTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVV 300

Query: 301 SAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGR 360
           SAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGR
Sbjct: 301 SAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGR 360

Query: 361 DMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYG 420
           DMEEALSCVRKMKEEGIEMSLVTYSILV GFAKTGNAESADHWFQEAKEKHSSLNAIIYG
Sbjct: 361 DMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYG 420

Query: 421 NIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKEC 480
           NIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTM+GDEDKCLLVFERFKEC
Sbjct: 421 NIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKEC 480

Query: 481 GLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANA 540
           GLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANA
Sbjct: 481 GLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANA 540

Query: 541 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHG 600
           FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHG
Sbjct: 541 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHG 600

Query: 601 FARKGEIKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPN 660
           FARKGE+KKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPN
Sbjct: 601 FARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPN 660

Query: 661 EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 720
           EHTYTTIMHGYASLGDTGKAF YFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK
Sbjct: 661 EHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 720

Query: 721 EMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAG 780
           EMSAQNIPRNTFIYNILIDGWARRGD+WEAADLMQQMKREGVQPDIHTYTSFINACSKAG
Sbjct: 721 EMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAG 780

Query: 781 DMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYH 840
           DMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYH
Sbjct: 781 DMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYH 840

Query: 841 CLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITEA 900
           CLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITEA
Sbjct: 841 CLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITEA 900

Query: 901 LQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESDGDVVGRS 960
           LQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESDGDVVGRS
Sbjct: 901 LQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESDGDVVGRS 960

Query: 961 WF 963
           WF
Sbjct: 961 WF 962

[Close]

BLAST of CSPI05G26230 vs. NCBI nr
Match: KAA0034647.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK09199.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1871.3 bits (4846), Expect = 0.0e+00
Identity = 931/963 (96.68%), Postives = 950/963 (98.65%), Query Frame = 0


Query: 1   MDVRSLSNATTTTSSTVFSSHRRR-RHHYSHPSPAIIIFSLKPPSPPTPSRSDSDDSSSS 60
           MDVRSLSNATTTTSSTVFSSHRRR  HHYSHP PA+I+FSLKPPSPPTP RSDSDDSSSS
Sbjct: 1   MDVRSLSNATTTTSSTVFSSHRRRHHHHYSHPPPAVILFSLKPPSPPTPPRSDSDDSSSS 60

Query: 61  DPSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE 120
            PSLSGRIRRPQTLKTTSSPKRT+SQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE
Sbjct: 61  SPSLSGRIRRPQTLKTTSSPKRTSSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE 120

Query: 121 KLWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIK 180
           KLWLSSKLSPPPPPISELLEED+NEIEEIE++NSSSKGRREVQFRQEGK+FVGNLPNWIK
Sbjct: 121 KLWLSSKLSPPPPPISELLEEDQNEIEEIETENSSSKGRREVQFRQEGKVFVGNLPNWIK 180

Query: 181 KHEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHGR 240
           KHEVQEFFRQFGPVKNVILIKGHNA ERNAGYGFIIYDG TA KSAIKAVEFDGVEFHGR
Sbjct: 181 KHEVQEFFRQFGPVKNVILIKGHNATERNAGYGFIIYDGPTAAKSAIKAVEFDGVEFHGR 240

Query: 241 VLTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAV 300
           VLTVKLDDGRRLKEKT+ERARWMEGDDSVEYRSHWHEERDKARNG RKVIETEPENWQAV
Sbjct: 241 VLTVKLDDGRRLKEKTNERARWMEGDDSVEYRSHWHEERDKARNGFRKVIETEPENWQAV 300

Query: 301 VSAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVG 360
           VSAF+RIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVG
Sbjct: 301 VSAFDRIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVG 360

Query: 361 RDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIY 420
           RDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAK GNAESADHWFQEAKEKHSS+NAIIY
Sbjct: 361 RDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAESADHWFQEAKEKHSSMNAIIY 420

Query: 421 GNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKE 480
           GNIIYAYCQRCNMD+AEALVREMEEEGIDAPIDIYHTMMDGYTM+GDE+KCLLVFERFKE
Sbjct: 421 GNIIYAYCQRCNMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLVFERFKE 480

Query: 481 CGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN 540
           CGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKT+SMLINGFLKLKDWAN
Sbjct: 481 CGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTFSMLINGFLKLKDWAN 540

Query: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIH 600
           AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIH
Sbjct: 541 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIH 600

Query: 601 GFARKGEIKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSP 660
           GFARKGE+KKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSP
Sbjct: 601 GFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSP 660

Query: 661 NEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVT 720
           NEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGL LDVYTYEALLKACCKSGRMQSALAVT
Sbjct: 661 NEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLGLDVYTYEALLKACCKSGRMQSALAVT 720

Query: 721 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKA 780
           KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKA
Sbjct: 721 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKA 780

Query: 781 GDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVY 840
           GDMQRATKTIEEMKSVGVKPNVKTYTTLI+GWARASLPEKALSCFEEMKLSGLKPD+AVY
Sbjct: 781 GDMQRATKTIEEMKSVGVKPNVKTYTTLIHGWARASLPEKALSCFEEMKLSGLKPDKAVY 840

Query: 841 HCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITE 900
           HCLMTSLLSRATVA GCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITE
Sbjct: 841 HCLMTSLLSRATVAQGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITE 900

Query: 901 ALQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESDGDVVGR 960
           ALQKTFPPNWN+YNNTLT+SNIDSDDESDISDDEDDDICQ GASSNAGDDGESDGDVVGR
Sbjct: 901 ALQKTFPPNWNLYNNTLTSSNIDSDDESDISDDEDDDICQGGASSNAGDDGESDGDVVGR 960

Query: 961 SWF 963
           SWF
Sbjct: 961 SWF 963

[Close]

BLAST of CSPI05G26230 vs. NCBI nr
Match: XP_008446749.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g04810, chloroplastic [Cucumis melo])

HSP 1 Score: 1861.7 bits (4821), Expect = 0.0e+00
Identity = 930/969 (95.98%), Postives = 949/969 (97.94%), Query Frame = 0


Query: 1   MDVRSLSNATTTTSSTVFSSHRRR-RHHYSHPSPAIIIFSLKPPSPPTPSRSDSDDSSSS 60
           MDVRSLSNATTTTSSTVFSSHRRR  HHYSHP PA+I+FSLKPPSPPTP RSDSDDSSSS
Sbjct: 14  MDVRSLSNATTTTSSTVFSSHRRRHHHHYSHPPPAVILFSLKPPSPPTPPRSDSDDSSSS 73

Query: 61  DPSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE 120
            PSLSGRIRRPQTLKTTSSPKRT+SQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE
Sbjct: 74  SPSLSGRIRRPQTLKTTSSPKRTSSQVPSNPLRNLVGSAYVPILPPPPPPPPPVSHSLSE 133

Query: 121 KLWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIK 180
           KLWLSSKLSPPPPPISELLEED+NEIEEIE++NSSSKGRREVQFRQEGK+FVGNLPNWIK
Sbjct: 134 KLWLSSKLSPPPPPISELLEEDQNEIEEIETENSSSKGRREVQFRQEGKVFVGNLPNWIK 193

Query: 181 KHEVQEFFRQFGPVKNVILIKGHNAVERNAG------YGFIIYDGLTADKSAIKAVEFDG 240
           KHEVQEFFRQFGPVKNVILIKGHNA ERNAG       GFIIYDG TA KSAIKAVEFDG
Sbjct: 194 KHEVQEFFRQFGPVKNVILIKGHNATERNAGXXXXXXXGFIIYDGPTAAKSAIKAVEFDG 253

Query: 241 VEFHGRVLTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEP 300
           VEFHGRVLTVKLDDGRRLKEKT+ERARWMEGDDSVEYRSHWHEERDKARNG RKVIETEP
Sbjct: 254 VEFHGRVLTVKLDDGRRLKEKTNERARWMEGDDSVEYRSHWHEERDKARNGFRKVIETEP 313

Query: 301 ENWQAVVSAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLI 360
           ENWQAVVSAF+RIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLI
Sbjct: 314 ENWQAVVSAFDRIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLI 373

Query: 361 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSS 420
           HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAK GNAESADHWFQEAKEKHSS
Sbjct: 374 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAESADHWFQEAKEKHSS 433

Query: 421 LNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLV 480
           +NAIIYGNIIYAYCQRCNMD+AEALVREMEEEGIDAPIDIYHTMMDGYTM+GDE+KCLLV
Sbjct: 434 MNAIIYGNIIYAYCQRCNMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEEKCLLV 493

Query: 481 FERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLK 540
           FERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKT+SMLINGFLK
Sbjct: 494 FERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTFSMLINGFLK 553

Query: 541 LKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT 600
           LKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT
Sbjct: 554 LKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT 613

Query: 601 FMPIIHGFARKGEIKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 660
           FMPIIHGFARKGE+KKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT
Sbjct: 614 FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 673

Query: 661 LAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQ 720
           LAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGL LDVYTYEALLKACCKSGRMQ
Sbjct: 674 LAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLGLDVYTYEALLKACCKSGRMQ 733

Query: 721 SALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFI 780
           SALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFI
Sbjct: 734 SALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFI 793

Query: 781 NACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLK 840
           NACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLI+GWARASLPEKALSCFEEMKLSGLK
Sbjct: 794 NACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLIHGWARASLPEKALSCFEEMKLSGLK 853

Query: 841 PDRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERT 900
           PD+AVYHCLMTSLLSRATVA GCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERT
Sbjct: 854 PDKAVYHCLMTSLLSRATVAQGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERT 913

Query: 901 GGEITEALQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESD 960
           GGEITEALQKTFPPNWN+YNNTLT+SNIDSDDESDISDDEDDDICQ GASSNAGDDGESD
Sbjct: 914 GGEITEALQKTFPPNWNLYNNTLTSSNIDSDDESDISDDEDDDICQGGASSNAGDDGESD 973

Query: 961 GDVVGRSWF 963
           GDVVGRSWF
Sbjct: 974 GDVVGRSWF 982

[Close]

BLAST of CSPI05G26230 vs. NCBI nr
Match: XP_022150548.1 (pentatricopeptide repeat-containing protein At5g04810, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 1724.5 bits (4465), Expect = 0.0e+00
Identity = 871/974 (89.43%), Postives = 916/974 (94.05%), Query Frame = 0


Query: 1   MDVRSLSNATTTTSSTVFSS---HRRRRHHYSHPSPAIIIFSLKPPSPP---TPS-RSDS 60
           MD RSLSN TTTTSS  FS+   HRRR  H+SHPS A+IIFSLKPP PP   +PS RSDS
Sbjct: 1   MDARSLSNTTTTTSSACFSAVLPHRRR--HHSHPSSAVIIFSLKPPLPPPHHSPSPRSDS 60

Query: 61  DDSSSSDPSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILPPPPPPPPP- 120
           DDSSSS PSLSGRIRRPQTLKTTSSPKRTTS+VPSNPL+NLVGSAYVP+LPPPPPPPPP 
Sbjct: 61  DDSSSSTPSLSGRIRRPQTLKTTSSPKRTTSKVPSNPLKNLVGSAYVPVLPPPPPPPPPP 120

Query: 121 ---VSHSLSEKLWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKI 180
              VS+SLS KLWLSSKLSPPPPP SE  +ED NE+EEI ++NSSSKGR E++ RQEGKI
Sbjct: 121 PPHVSYSLSNKLWLSSKLSPPPPPTSEASDEDENEVEEIVTENSSSKGRGEIELRQEGKI 180

Query: 181 FVGNLPNWIKKHEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAV 240
           FVGNLP+WIKKHE+QEFFRQFGPVKNVILIKGH+A ERNAGYGF+IYDGLTA KSA+KAV
Sbjct: 181 FVGNLPSWIKKHELQEFFRQFGPVKNVILIKGHDATERNAGYGFVIYDGLTAAKSAMKAV 240

Query: 241 EFDGVEFHGRVLTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVI 300
           EFDGVEFHGRVLTVKLDDGRRLKEKT+ERARWMEGDDSVEYRS WHEERDKARNG RKVI
Sbjct: 241 EFDGVEFHGRVLTVKLDDGRRLKEKTEERARWMEGDDSVEYRSQWHEERDKARNGFRKVI 300

Query: 301 ETEPENWQAVVSAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVY 360
           ETEPENWQAVV AFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEP+SHVY
Sbjct: 301 ETEPENWQAVVWAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPTSHVY 360

Query: 361 TNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKE 420
           TNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAK  NAESADHWFQEAKE
Sbjct: 361 TNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMRNAESADHWFQEAKE 420

Query: 421 KHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDK 480
           KHSSLNAIIYGNIIYAYCQ CNM++AEALVR+MEEEGIDAPIDIYHTMMDGYTMIGDEDK
Sbjct: 421 KHSSLNAIIYGNIIYAYCQTCNMERAEALVRQMEEEGIDAPIDIYHTMMDGYTMIGDEDK 480

Query: 481 CLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLIN 540
           CLLVFERFKECGLNPSVITYGCLINLY KLGKV+KALEVSKEMEHAGIKHNMKTYSMLIN
Sbjct: 481 CLLVFERFKECGLNPSVITYGCLINLYTKLGKVAKALEVSKEMEHAGIKHNMKTYSMLIN 540

Query: 541 GFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKP 600
           GFLKLKDWANAFAIFEDLI+DGIKPDVVLYNNIITAFCGMGKMDRA+CTVKEMQKQRH+P
Sbjct: 541 GFLKLKDWANAFAIFEDLIRDGIKPDVVLYNNIITAFCGMGKMDRAICTVKEMQKQRHRP 600

Query: 601 TTRTFMPIIHGFARKGEIKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL 660
           TTRTFMPIIHGFARKGE++KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKA +IL
Sbjct: 601 TTRTFMPIIHGFARKGEMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEIL 660

Query: 661 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKS 720
           DEMTL+GVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLR EGL+LDVYTYEALLKACCKS
Sbjct: 661 DEMTLSGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRSEGLELDVYTYEALLKACCKS 720

Query: 721 GRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTY 780
           GRMQSALAVTKEMSAQ IPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTY
Sbjct: 721 GRMQSALAVTKEMSAQKIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTY 780

Query: 781 TSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKL 840
           TSFINACSKAGDMQRATKTIEEM+SVGVKPNVKTYTTLI+GWARASLPE ALSCFEEMKL
Sbjct: 781 TSFINACSKAGDMQRATKTIEEMRSVGVKPNVKTYTTLIHGWARASLPENALSCFEEMKL 840

Query: 841 SGLKPDRAVYHCLMTSLLSRATV-AHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLL 900
           SGLKPD+AVYHCLMTSLLSRATV A G IYPGILSVCREMVD  LTVDMGTAVHWSKCL 
Sbjct: 841 SGLKPDKAVYHCLMTSLLSRATVAAEGSIYPGILSVCREMVDSGLTVDMGTAVHWSKCLR 900

Query: 901 KIERTGGEITEALQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGD 960
           KIERTGGEITEALQKTFPPNWN Y+N LT+S++D++DESD+SD  DDDIC  G  SNA +
Sbjct: 901 KIERTGGEITEALQKTFPPNWNSYDNALTSSSVDAEDESDVSD--DDDIC-HGGVSNADE 960

Query: 961 DGESDGDVVGRSWF 963
           D E+D DVVGRSWF
Sbjct: 961 DDENDDDVVGRSWF 969

[Close]

BLAST of CSPI05G26230 vs. NCBI nr
Match: KAG6573890.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1687.2 bits (4368), Expect = 0.0e+00
Identity = 852/966 (88.20%), Postives = 900/966 (93.17%), Query Frame = 0


Query: 1   MDVRSLSNATTTTSSTVFSSHRRRRHHYSHPSPAIIIFSLK-PPSPPTPSRSDSDDSSSS 60
           MDVRSLSNAT+TTSS VF    RRRHH+SHPS A+I+FSLK PP PP P RSDSDDSS S
Sbjct: 1   MDVRSLSNATSTTSSAVFPP-SRRRHHHSHPSSALIVFSLKRPPPPPPPPRSDSDDSSGS 60

Query: 61  DPSLSGRIRRPQTLKTTSSPKRTTSQVPSNPLRNLVGSAYVPILP-PPPPPPPPVSHSLS 120
             S+SGRIRRPQ LKT+SSPKRTTS+VPSNPL+NLVGSA  P+LP PPPPPPPPVSHSL 
Sbjct: 61  TASISGRIRRPQILKTSSSPKRTTSKVPSNPLKNLVGSANAPVLPLPPPPPPPPVSHSLG 120

Query: 121 EKLWLSSKLSPPPPPISELLEEDRNEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWI 180
           +KLWLSSKLSPPPPPI+E+ EED +E EEIE+++SSS+GRREVQFRQEGKIFVGNLPNWI
Sbjct: 121 DKLWLSSKLSPPPPPITEIPEEDESENEEIETEDSSSEGRREVQFRQEGKIFVGNLPNWI 180

Query: 181 KKHEVQEFFRQFGPVKNVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHG 240
           KKHEVQ+FFRQFGPV NVILIKGH+  +RNAGYGF+IYDG TA+KSA+KAVEFDGVEFHG
Sbjct: 181 KKHEVQQFFRQFGPVNNVILIKGHDTTKRNAGYGFVIYDGSTAEKSAMKAVEFDGVEFHG 240

Query: 241 RVLTVKLDDGRRLKEKTDERARWMEGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQA 300
           RVLTVKLDDGRRLKEK  +RA+WMEGDDSVE+RS WHEERDKAR   R VIETEPE+WQA
Sbjct: 241 RVLTVKLDDGRRLKEKAYQRAKWMEGDDSVEFRSQWHEERDKARKSFRMVIETEPEDWQA 300

Query: 301 VVSAFERIKKPSRKEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAV 360
           VVSAFERIKKPSRKEY LMVNYYARRGDMHRARETFEKMRARGIEP+SHVYTNLIHAYAV
Sbjct: 301 VVSAFERIKKPSRKEYSLMVNYYARRGDMHRARETFEKMRARGIEPTSHVYTNLIHAYAV 360

Query: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAII 420
           GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAK GNAE+ADHWFQEAKEKH SLNAII
Sbjct: 361 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKMGNAEAADHWFQEAKEKH-SLNAII 420

Query: 421 YGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFK 480
           YGNIIYAYCQ CNMD+AEALVR+MEEEGIDAPIDIYHTMMDGYTM+GDE KCLLVFERFK
Sbjct: 421 YGNIIYAYCQICNMDRAEALVRQMEEEGIDAPIDIYHTMMDGYTMVGDEKKCLLVFERFK 480

Query: 481 ECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWA 540
           ECGLNPSVITYGCLINLY KLGKVSKALEVSKEMEH GIKHNMKTYSMLINGFLKLKDWA
Sbjct: 481 ECGLNPSVITYGCLINLYTKLGKVSKALEVSKEMEHVGIKHNMKTYSMLINGFLKLKDWA 540

Query: 541 NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPII 600
           NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH+PTTRTFMPII
Sbjct: 541 NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHRPTTRTFMPII 600

Query: 601 HGFARKGEIKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVS 660
           HGFAR+G+++KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKA +ILDEMTLAGVS
Sbjct: 601 HGFARQGDMRKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAVEILDEMTLAGVS 660

Query: 661 PNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAV 720
           PNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGL+LDVYTYEALLKACCKSGRMQSALAV
Sbjct: 661 PNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLKLDVYTYEALLKACCKSGRMQSALAV 720

Query: 721 TKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSK 780
           TKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADL+QQMK+EGVQPDIHTYTSFINACSK
Sbjct: 721 TKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLIQQMKKEGVQPDIHTYTSFINACSK 780

Query: 781 AGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAV 840
           AGDMQRATKTI EMKS  VKPNVKTYTTLI+GWARASLPEKALSCF EMKLSGLKPD+AV
Sbjct: 781 AGDMQRATKTIVEMKSARVKPNVKTYTTLIHGWARASLPEKALSCFAEMKLSGLKPDKAV 840

Query: 841 YHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEIT 900
           YHCLMTSLLSRATVA G IYPGILSVC+EMVD  LTVDMGTAVHWSKCL KIERTGGEIT
Sbjct: 841 YHCLMTSLLSRATVAEGSIYPGILSVCKEMVDSGLTVDMGTAVHWSKCLRKIERTGGEIT 900

Query: 901 EALQKTFPPNWNVYNNTLTNSNIDSDDESDISDD--EDDDICQEGASSNAGDDGESDGDV 960
           EALQKTFPPNWN YNN   +S++DSDDE  ISDD  EDDDICQE   S+A DD     DV
Sbjct: 901 EALQKTFPPNWNSYNNVHMSSSLDSDDEYGISDDENEDDDICQEEV-SDARDD-----DV 958

Query: 961 VGRSWF 963
           VGRSWF
Sbjct: 961 VGRSWF 958

[Close]

BLAST of CSPI05G26230 vs. TAIR 10
Match: AT5G04810.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 624/945 (66.03%), Postives = 755/945 (79.89%), Query Frame = 0


Query: 30  HPSPAIIIFSLK--PPSPPTPSRSDSDDSSSSDPSLSGRIRRPQTLKTTSSPKRTTSQVP 89
           H   A I FSLK  PP PP P  S  D            +RRP+    +SS   + S +P
Sbjct: 25  HSPVASISFSLKQPPPQPPEPPESPPD------------LRRPEKSIGSSSSSSSPSPIP 84

Query: 90  S-------NPLRNLVGSAYVPILPPPPPPPPPVS--HSLSEKLWLSSKLS-PPPPPISEL 149
           S       NPL+ L   + V  L          S   SL+ KL LSSKLS PPPPP    
Sbjct: 85  SPKTPLKINPLKGLTNRSSVSPLVQSEVSSKVSSFGSSLASKLRLSSKLSPPPPPPPPPP 144

Query: 150 LEEDRNEIEEIESDNSSSKGRR---EVQFRQEGKIFVGNLPNWIKKHEVQEFFRQFGPVK 209
           +EE     +E  SD    +      + +FRQEGKIFVGNLP WIKK E +EFFRQFGP++
Sbjct: 145 VEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIFVGNLPTWIKKPEFEEFFRQFGPIE 204

Query: 210 NVILIKGHNAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFHGRVLTVKLDDGRRLKEK 269
           NVILIKGH+ VE+NAG+GFIIY    A+KSA+KAVEFDGVEFHGR+LTVKLDDG+RLK K
Sbjct: 205 NVILIKGHHEVEKNAGFGFIIY---AAEKSAMKAVEFDGVEFHGRILTVKLDDGKRLKTK 264

Query: 270 TDERARWM---EGDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVVSAFERIKKPSR 329
            ++R RW+   E D  +  +S WH+ER+ +R  L+++++T  +NWQAV+SAFE+I KPSR
Sbjct: 265 AEQRVRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSR 324

Query: 330 KEYGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRK 389
            E+GLMV +Y RRGDMHRARETFE+MRARGI P+S +YT+LIHAYAVGRDM+EALSCVRK
Sbjct: 325 TEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRK 384

Query: 390 MKEEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCN 449
           MKEEGIEMSLVTYS++VGGF+K G+AE+AD+WF EAK  H +LNA IYG IIYA+CQ CN
Sbjct: 385 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 444

Query: 450 MDKAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKECGLNPSVITYGC 509
           M++AEALVREMEEEGIDAPI IYHTMMDGYTM+ DE K L+VF+R KECG  P+V+TYGC
Sbjct: 445 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 504

Query: 510 LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 569
           LINLY K+GK+SKALEVS+ M+  G+KHN+KTYSM+INGF+KLKDWANAFA+FED++K+G
Sbjct: 505 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 564

Query: 570 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEIKKAL 629
           +KPDV+LYNNII+AFCGMG MDRA+ TVKEMQK RH+PTTRTFMPIIHG+A+ G+++++L
Sbjct: 565 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 624

Query: 630 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGY 689
           +VFDMMR  GC+PTVHT+N LI GLVEKR+MEKA +ILDEMTLAGVS NEHTYT IM GY
Sbjct: 625 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 684

Query: 690 ASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 749
           AS+GDTGKAF YFT+L++EGL +D++TYEALLKACCKSGRMQSALAVTKEMSA+NIPRN+
Sbjct: 685 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 744

Query: 750 FIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEE 809
           F+YNILIDGWARRGDVWEAADL+QQMK+EGV+PDIHTYTSFI+ACSKAGDM RAT+TIEE
Sbjct: 745 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 804

Query: 810 MKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRAT 869
           M+++GVKPN+KTYTTLI GWARASLPEKALSC+EEMK  G+KPD+AVYHCL+TSLLSRA+
Sbjct: 805 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 864

Query: 870 VAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGEITEALQKTFPPNWNV 929
           +A   IY G++++C+EMV+  L VDMGTAVHWSKCL KIE +GGE+TE LQKTFPP+W+ 
Sbjct: 865 IAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETLQKTFPPDWSS 924

Query: 930 YNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESDGDV 957
           ++    + +   D  SD+  DEDD           G+DGE D DV
Sbjct: 925 HH----HHHGFLDQVSDVDSDEDD---------VDGEDGEDDEDV 941

[Close]

BLAST of CSPI05G26230 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 255.0 bits (650), Expect = 2.4e-67
Identity = 136/496 (27.42%), Postives = 246/496 (49.60%), Query Frame = 0


Query: 314 YGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
           Y + +N + RR  +  A     KM   G EP     ++L++ Y   + + +A++ V +M 
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 374 EEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433
           E G +    T++ L+ G      A  A     +  ++    + + YG ++   C+R ++D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKECGLNPSVITYGCLI 493
            A +L+++ME+  I+A + IY+T++DG       D  L +F      G+ P V TY  LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300

Query: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553
           +     G+ S A  +  +M    I  N+ T+S LI+ F+K      A  +++++IK  I 
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 554 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEIKKALDV 613
           PD+  Y+++I  FC   ++D A    + M  +   P   T+  +I GF +   +++ +++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420

Query: 614 FDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYAS 673
           F  M   G +    TY  LI G  + R  + A+ +  +M   GV PN  TY  ++ G   
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480

Query: 674 LGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 733
            G   KA   F  L+   ++ D+YTY  +++  CK+G+++    +   +S + +  N   
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540

Query: 734 YNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 793
           YN +I G+ R+G   EA  L+++MK +G  P+  TY + I A  + GD + + + I+EM+
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600

Query: 794 SVGVKPNVKTYTTLIN 810
           S G   +  T   + N
Sbjct: 601 SCGFAGDASTIGLVTN 616

[Close]

BLAST of CSPI05G26230 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 246.5 bits (628), Expect = 8.6e-65
Identity = 137/496 (27.62%), Postives = 248/496 (50.00%), Query Frame = 0


Query: 314 YGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
           Y +++N + RR  +  A     KM   G EP     ++L++ Y  G+ + EA++ V +M 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177

Query: 374 EEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433
               + + VT++ L+ G      A  A         +    +   YG ++   C+R ++D
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237

Query: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKECGLNPSVITYGCLI 493
            A +L+++ME+  I+A + IY T++D      + +  L +F      G+ P+V+TY  LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297

Query: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553
                 G+ S A  +  +M    I  N+ T+S LI+ F+K      A  +++++IK  I 
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 554 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEIKKALDV 613
           PD+  Y+++I  FC   ++D A    + M  +   P   T+  +I GF +   +++ +++
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 614 FDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYAS 673
           F  M   G +    TYN LI GL +    + A++I  +M   GV P+  TY+ ++ G   
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 674 LGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 733
            G   KA   F  L+   ++ D+YTY  +++  CK+G+++    +   +S + +  N  I
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537

Query: 734 YNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 793
           Y  +I G+ R+G   EA  L ++MK +G  P+  TY + I A  + GD   + + I+EM+
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597

Query: 794 SVGVKPNVKTYTTLIN 810
           S G   +  T + +IN
Sbjct: 598 SCGFVGDASTISMVIN 613

[Close]

BLAST of CSPI05G26230 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 246.1 bits (627), Expect = 1.1e-64
Identity = 136/496 (27.42%), Postives = 247/496 (49.80%), Query Frame = 0


Query: 314 YGLMVNYYARRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
           Y +++N + RR  +  A     KM   G EP+    ++L++ Y   + + EA++ V +M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 374 EEGIEMSLVTYSILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433
             G + + VT++ L+ G      A  A         K    + + YG ++   C+R + D
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKECGLNPSVITYGCLI 493
            A  L+ +ME+  ++  + IY+T++DG       D  L +F+  +  G+ P+V+TY  LI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553
           +     G+ S A  +  +M    I  ++ T+S LI+ F+K      A  ++++++K  I 
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 554 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEIKKALDV 613
           P +V Y+++I  FC   ++D A    + M  +   P   T+  +I GF +   +++ ++V
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418

Query: 614 FDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYAS 673
           F  M   G +    TYN LI GL +    + A++I  EM   GV PN  TY T++ G   
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478

Query: 674 LGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 733
            G   KA   F  L+   ++  +YTY  +++  CK+G+++    +   +S + +  +   
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538

Query: 734 YNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 793
           YN +I G+ R+G   EA  L ++MK +G  P+   Y + I A  + GD + + + I+EM+
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598

Query: 794 SVGVKPNVKTYTTLIN 810
           S G   +  T   + N
Sbjct: 599 SCGFAGDASTIGLVTN 614

[Close]

BLAST of CSPI05G26230 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 246.1 bits (627), Expect = 1.1e-64
Identity = 152/544 (27.94%), Postives = 263/544 (48.35%), Query Frame = 0


Query: 326 DMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYS 385
           D+ RA+E    M A G + +   Y  LI      + + EA+   + +  + ++  +VTY 
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301

Query: 386 ILVGGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEE 445
            LV G  K    E       E      S +     +++    +R  +++A  LV+ + + 
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361

Query: 446 GIDAPIDIYHTMMDGYTMIGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKA 505
           G+   + +Y+ ++D         +  L+F+R  + GL P+ +TY  LI+++ + GK+  A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421

Query: 506 LEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITA 565
           L    EM   G+K ++  Y+ LING  K  D + A     ++I   ++P VV Y +++  
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481

Query: 566 FCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEIKKALDVFDMMRMSGCIPT 625
           +C  GK+++A+    EM  +   P+  TF  ++ G  R G I+ A+ +F+ M      P 
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541

Query: 626 VHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFT 685
             TYN +I G  E+  M KA + L EMT  G+ P+ ++Y  ++HG    G   +A  +  
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601

Query: 686 KLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRG 745
            L     +L+   Y  LL   C+ G+++ AL+V +EM  + +  +   Y +LIDG  +  
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661

Query: 746 DVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYT 805
           D      L+++M   G++PD   YTS I+A SK GD + A    + M + G  PN  TYT
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721

Query: 806 TLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSL------LSRATVAHGCIYP 864
            +ING  +A    +A     +M+     P++  Y C +  L      + +A   H  I  
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK 781

The following BLAST results are available for this feature:

BLAST of CSPI05G26230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WMY5	0.0e+00	66.03	Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidop...	[more]
Q9LQ16	3.4e-66	27.42	Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX...	[more]
Q9LQ14	1.2e-63	27.62	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
Q9FJE6	1.6e-63	27.94	Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th...	[more]
Q9SXD1	1.6e-63	27.42	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop...	[more]

BLAST of CSPI05G26230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFW5	0.0e+00	96.68	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KTE3	0.0e+00	97.19	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G613570 PE=3 SV...	[more]
A0A1S3BFB6	0.0e+00	95.98	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g04810, chlo...	[more]
A0A6J1D9Q6	0.0e+00	89.43	pentatricopeptide repeat-containing protein At5g04810, chloroplastic isoform X1 ...	[more]
A0A6J1FZV7	0.0e+00	88.00	pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Cucurbit...	[more]

BLAST of CSPI05G26230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135367.2	0.0e+00	99.27	pentatricopeptide repeat-containing protein At5g04810, chloroplastic [Cucumis sa...	[more]
KAA0034647.1	0.0e+00	96.68	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK09199...	[more]
XP_008446749.1	0.0e+00	95.98	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g...	[more]
XP_022150548.1	0.0e+00	89.43	pentatricopeptide repeat-containing protein At5g04810, chloroplastic isoform X1 ...	[more]
KAG6573890.1	0.0e+00	88.20	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]

BLAST of CSPI05G26230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04810.1	0.0e+00	66.03	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G62910.1	2.4e-67	27.42	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62930.1	8.6e-65	27.62	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62670.1	1.1e-64	27.42	rna processing factor 2	[more]
AT5G59900.1	1.1e-64	27.94	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 924..939
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 916..962
None	No IPR available	PANTHER	PTHR47939	MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE	coord: 1..936
None	No IPR available	PANTHER	PTHR47939:SF1	OS04G0684500 PROTEIN	coord: 1..936
None	No IPR available	CDD	cd00590	RRM_SF	coord: 169..244 e-value: 2.20503E-15 score: 69.6413
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 319..560
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 168..244 e-value: 6.8E-13 score: 58.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 169..241 e-value: 3.9E-10 score: 39.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 167..248 score: 14.965146
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 285..447 e-value: 1.0E-34 score: 122.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 760..854 e-value: 5.5E-29 score: 102.8 coord: 448..533 e-value: 5.7E-20 score: 73.4 coord: 534..637 e-value: 2.0E-29 score: 104.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 638..759 e-value: 5.1E-35 score: 123.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 418..447 e-value: 1.0E-4 score: 22.3 coord: 453..482 e-value: 0.0069 score: 16.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 543..598 e-value: 1.9E-9 score: 37.5 coord: 334..391 e-value: 1.1E-10 score: 41.4 coord: 753..809 e-value: 1.2E-15 score: 57.3 coord: 685..738 e-value: 1.4E-7 score: 31.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 484..532 e-value: 1.2E-11 score: 44.6 coord: 624..672 e-value: 1.6E-14 score: 53.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 697..730 e-value: 6.5E-6 score: 24.0 coord: 348..380 e-value: 2.6E-6 score: 25.2 coord: 382..415 e-value: 0.0014 score: 16.6 coord: 662..696 e-value: 6.2E-6 score: 24.1 coord: 523..556 e-value: 7.1E-7 score: 27.0 coord: 767..801 e-value: 1.8E-7 score: 28.9 coord: 733..766 e-value: 6.6E-7 score: 27.1 coord: 487..520 e-value: 2.0E-6 score: 25.6 coord: 627..661 e-value: 2.4E-7 score: 28.5 coord: 314..345 e-value: 1.7E-6 score: 25.9 coord: 453..485 e-value: 1.7E-4 score: 19.6 coord: 803..835 e-value: 1.0E-8 score: 32.8 coord: 557..590 e-value: 2.1E-5 score: 22.4 coord: 418..447 e-value: 5.0E-6 score: 24.4 coord: 593..625 e-value: 2.0E-7 score: 28.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 380..414 score: 8.812943
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 765..799 score: 12.41921
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 345..379 score: 10.347525
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 625..659 score: 11.542307
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 695..729 score: 11.23539
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 730..764 score: 12.649398
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 415..449 score: 10.435215
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 800..834 score: 12.386327
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 520..554 score: 11.41077
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 485..519 score: 10.676364
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 590..624 score: 11.279235
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 660..694 score: 10.237912
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 450..484 score: 8.933517
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 310..344 score: 11.180584
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 555..589 score: 11.005202
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 135..261 e-value: 7.6E-18 score: 66.9
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 162..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G26230.1	CSPI05G26230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding