CSPI05G26150 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCCGTAAATTGTGTTCTCCAAACATAGAATCGGGTGCAGCGGAATATTTTTCCATTTGGTCTTCTCCTTCGTCCTCTGAACGATCCAAGAAAAAGAGATATCAACAAAGAGATTCTCATCGCGATCTTCTCGCTGTAACCAAATTCTCATTTTGGAGGGTTTTTCTTCCGAATTCCGGCGTCGTTTCTCTTCTTTCTAAGTTAATCAACGTCGAATTCCTCCATTTTTTTGTTCTTTTTTGCAGCGAAGGAATAGGGAGAAGAACAGAAAGATGAAGAGGGTTTTTGGTGTCAAGAAAGACAAAGAACCGCCGCCTTCTATTCAAGATGCCTCCGATAGGGTAAACCGTTATAATTTTTGACATCTAGGGTTTTGGTTTTGGTTTTAATCGATTTGTTTCAATTGGGGTTGAGCGTGTTCTGTTTTTCAGATTAATAAAAGGGGTGAATCAGTTGATGATAAGATAAAGAAGCTTGATGTTGAACTCAGTAGATATAAGGAGCAGATCAAGAAAACGAGGCCTGGTCCAGCTCAAGAAGCTGTTAAAGCTCGAGCAATGAGAGTTCTAAAGCAAAAACGAATGTATGTTCCGTGCTACATGAGCATATGATTAACCTTCATATTCTTTCACTTAAAAAGTAGTTTGGCTTGGAGATCTACCACAAGCCTGTATGTCAACTTTGTTCGTGTTTTAAGGCATATATGTTTACTTAAACATGTTTCCTTGGGACTGGTCCTCTGCCTAACATTGGCCTATAATAGATTACTATGAACTTCTGTTTTTCCCTGTGCTTTTGTTGTACTTTTACCTTTTCGTAGTTAACTGTTAGGTTCCCGGGAATCCATTGTCTCCCTTTTCCAGAATTCCTTAAACTTTGATTCACTTGACCATAATTTAACTAATCTTGTTTATGGAATAAAGCTTGTAGATTTAATTGCTTGCTATCAAACTGAACGGGAAAGTTGTCTGACTAAAATTGGATTGGGATTATTTTGTTCTAAACTTAAAATTGTTCACCATGCTATGTATGGTTACTTTCTCTTGTTTACTATCAGAATGGTTATTAAGATATTTCTTTTGCTTCTGAACAGGTATGAAGGACAACGTGACATGCTTTACAATCAGACATTTAACTTAGATCAAGTTGCATTTGCCTCGGAGGGCATAAAAGATGCTCAGCAAACGGTAACATCTGCTGAATATTTTTGTGATAATTGGTCTTCTCATTTTTCAGCCATCCAAAAAAGTAATAATAATTAATAATAAAATGTGAGTCTTCCATGGCAGATTTGGACTTAAAGATTTAATGTTAGATCAAGGAAATCATAGGTTTGGAAAGGGGAAATAACTTACTTACGTACTTAATAATTGTTTTACTAGATATCGCGTGTATTAGTTTGTGTTTATTACGTGAGTCAGATGACCAAGAAATCTGGGTTGCGGTAATTCCTATTAATCCATCAGTTAATTCTTGCCAAAAATTTGTTTTCTTGGTACAAGTACAGAGTTCAGGGCAGTTCAGGTGGAGCTTTGTCTGTCTAATTGGAACCTGCTGCCTACCTCGTGAGAGAACGAGGTAGGGGACAAACATCTGTCATTAGGAAGGCATTTCTTGAAGTTCAATAAAATTCTATCTAGATTCTCTCTTATGGTTCTTCTTAATATCAGTTAGCTCGGATTGTGGATTGATATCCTGTTTTTATTTATCTATTTAATCAAATAGGAGAGTCACTTTATCTGTCAAACTAACGTTGGTTTTGTATTTTCCAGATGTCGGCCTTGAAATCCGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGAATACAAGACATAGATGTCAGTAGCAATCAACTCTTTTTATCATCCCTAGTTTTATTTTGGCATTTGTTGAGAGGTTTTGTATTGCCTGCAGAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTACCTGACGACATTGATGAGGATGAACTTTTGGGTGGTAAGAATACTGTATTTTGGCTCAATGTCGATGAAATATATGGTACCCTAGTTATCTTACATCGTGCCTACGTTTTGGATTATAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTGATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCTATAGGGCATGCAGCAGTTCCTGCTGGCAGAAACAATGCGCAGGTAATGGTCGTTGAAAAACAGGATCAATTTCTGAGTGAATAGTCACGAACTTGTTCGTTTAAAAGACGATTGTGAAATGCATATTACTTAGATTTACAGGATGCATGCTAATGCCAACACCCTTTTTTTTCTTTCTTGAGAAAATCACTACGTAGTTCACAACATGAACTGCATATGCATCCATTAACATGAAGTTACACATCTGTCGTCTGTTCAAGAGAATGTCAGGATCCATCTATTCTAAATTACATAGTGTTATTGGTTGATATGGTCTAATTTTACCTTTGCTCCTTCGGCTCTTTTACATGCATTGAGTTCTTTTTCCCCCCTTAATTGTACAGGCCGAGGATGAATTGGGTTTACCCGCTGTTCCTCACGCATCCCTTCGAGGCTAGAAGTTGCATTTGTCTCATCTGGACCATCTTTACCGGGAGGCCAAAAATTGGAGTGAATCTTTGTATACATATTTGTGCAGAGCTTATATTGATTCATATATAAATGGATAATCAATTCATCGTTTGATTATTTACTCCATCATGTATTTGATAACAACCTGCATTTGGAATTGTTCCTCCAGGCAGTCTGAAGTCTTTGGCTCAAACTATATATATATAGGCACATTCTTGGTATCATTTTTTTGTGTTGACAGTTCATAACTTATAGTTTATAGTTTATATGCCAGATAATATGTAGGCAC AGCCGTAAATTGTGTTCTCCAAACATAGAATCGGGTGCAGCGGAATATTTTTCCATTTGGTCTTCTCCTTCGTCCTCTGAACGATCCAAGAAAAAGAGATATCAACAAAGAGATTCTCATCGCGATCTTCTCGCTGTAACCAAATTCTCATTTTGGAGGGTTTTTCTTCCGAATTCCGGCGTCGTTTCTCTTCTTTCTAAGTTAATCAACGTCGAATTCCTCCATTTTTTTGTTCTTTTTTGCAGCGAAGGAATAGGGAGAAGAACAGAAAGATGAAGAGGGTTTTTGGTGTCAAGAAAGACAAAGAACCGCCGCCTTCTATTCAAGATGCCTCCGATAGGATTAATAAAAGGGGTGAATCAGTTGATGATAAGATAAAGAAGCTTGATGTTGAACTCAGTAGATATAAGGAGCAGATCAAGAAAACGAGGCCTGGTCCAGCTCAAGAAGCTGTTAAAGCTCGAGCAATGAGAGTTCTAAAGCAAAAACGAATGTATGAAGGACAACGTGACATGCTTTACAATCAGACATTTAACTTAGATCAAGTTGCATTTGCCTCGGAGGGCATAAAAGATGCTCAGCAAACGATGTCGGCCTTGAAATCCGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGAATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTACCTGACGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTGATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCTATAGGGCATGCAGCAGTTCCTGCTGGCAGAAACAATGCGCAGGCCGAGGATGAATTGGGTTTACCCGCTGTTCCTCACGCATCCCTTCGAGGCTAGAAGTTGCATTTGTCTCATCTGGACCATCTTTACCGGGAGGCCAAAAATTGGAGTGAATCTTTGTATACATATTTGTGCAGAGCTTATATTGATTCATATATAAATGGATAATCAATTCATCGTTTGATTATTTACTCCATCATGTATTTGATAACAACCTGCATTTGGAATTGTTCCTCCAGGCAGTCTGAAGTCTTTGGCTCAAACTATATATATATAGGCACATTCTTGGTATCATTTTTTTGTGTTGACAGTTCATAACTTATAGTTTATAGTTTATATGCCAGATAATATGTAGGCAC ATGAAGAGGGTTTTTGGTGTCAAGAAAGACAAAGAACCGCCGCCTTCTATTCAAGATGCCTCCGATAGGATTAATAAAAGGGGTGAATCAGTTGATGATAAGATAAAGAAGCTTGATGTTGAACTCAGTAGATATAAGGAGCAGATCAAGAAAACGAGGCCTGGTCCAGCTCAAGAAGCTGTTAAAGCTCGAGCAATGAGAGTTCTAAAGCAAAAACGAATGTATGAAGGACAACGTGACATGCTTTACAATCAGACATTTAACTTAGATCAAGTTGCATTTGCCTCGGAGGGCATAAAAGATGCTCAGCAAACGATGTCGGCCTTGAAATCCGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGAATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTACCTGACGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTGATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCTATAGGGCATGCAGCAGTTCCTGCTGGCAGAAACAATGCGCAGGCCGAGGATGAATTGGGTTTACCCGCTGTTCCTCACGCATCCCTTCGAGGCTAG MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEAVKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPHASLRG* Homology
BLAST of CSPI05G26150 vs. ExPASy Swiss-Prot
Match: Q9LPN5 (Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702 GN=VPS60-1 PE=1 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 4.9e-107 Identity = 199/237 (83.97%), Postives = 221/237 (93.25%), Query Frame = 0
BLAST of CSPI05G26150 vs. ExPASy Swiss-Prot
Match: Q9FMC5 (Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702 GN=VPS60-2 PE=2 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 1.6e-105 Identity = 196/237 (82.70%), Postives = 218/237 (91.98%), Query Frame = 0
BLAST of CSPI05G26150 vs. ExPASy Swiss-Prot
Match: Q9D7S9 (Charged multivesicular body protein 5 OS=Mus musculus OX=10090 GN=Chmp5 PE=1 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.2e-43 Identity = 109/233 (46.78%), Postives = 143/233 (61.37%), Query Frame = 0
BLAST of CSPI05G26150 vs. ExPASy Swiss-Prot
Match: Q4QQV8 (Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.2e-43 Identity = 109/233 (46.78%), Postives = 143/233 (61.37%), Query Frame = 0
BLAST of CSPI05G26150 vs. ExPASy Swiss-Prot
Match: Q7T339 (Charged multivesicular body protein 5 OS=Danio rerio OX=7955 GN=chmp5 PE=2 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.9e-43 Identity = 106/231 (45.89%), Postives = 143/231 (61.90%), Query Frame = 0
BLAST of CSPI05G26150 vs. ExPASy TrEMBL
Match: A0A0A0KWL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=4 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 2.7e-124 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CSPI05G26150 vs. ExPASy TrEMBL
Match: A0A5D3CBJ0 (Charged multivesicular body protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001830 PE=4 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 2.3e-123 Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of CSPI05G26150 vs. ExPASy TrEMBL
Match: A0A1S3BFT5 (charged multivesicular body protein 5 OS=Cucumis melo OX=3656 GN=LOC103489370 PE=4 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 2.3e-123 Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of CSPI05G26150 vs. ExPASy TrEMBL
Match: A0A5A7SZW9 (Charged multivesicular body protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G006570 PE=4 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 3.4e-119 Identity = 236/262 (90.08%), Postives = 236/262 (90.08%), Query Frame = 0
BLAST of CSPI05G26150 vs. ExPASy TrEMBL
Match: A0A6J1JDD4 (vacuolar protein sorting-associated protein 60.2 OS=Cucurbita maxima OX=3661 GN=LOC111483361 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 1.7e-118 Identity = 226/237 (95.36%), Postives = 231/237 (97.47%), Query Frame = 0
BLAST of CSPI05G26150 vs. NCBI nr
Match: XP_004135046.1 (vacuolar protein sorting-associated protein 60.1 [Cucumis sativus] >XP_031741404.1 vacuolar protein sorting-associated protein 60.1 [Cucumis sativus]) HSP 1 Score: 454.5 bits (1168), Expect = 5.5e-124 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CSPI05G26150 vs. NCBI nr
Match: XP_008446740.1 (PREDICTED: charged multivesicular body protein 5 [Cucumis melo] >TYK09191.1 charged multivesicular body protein 5 [Cucumis melo var. makuwa]) HSP 1 Score: 451.4 bits (1160), Expect = 4.7e-123 Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of CSPI05G26150 vs. NCBI nr
Match: XP_038891460.1 (vacuolar protein sorting-associated protein 60.1 [Benincasa hispida]) HSP 1 Score: 444.1 bits (1141), Expect = 7.5e-121 Identity = 232/237 (97.89%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of CSPI05G26150 vs. NCBI nr
Match: KAA0034639.1 (charged multivesicular body protein 5 [Cucumis melo var. makuwa]) HSP 1 Score: 437.6 bits (1124), Expect = 7.0e-119 Identity = 236/262 (90.08%), Postives = 236/262 (90.08%), Query Frame = 0
BLAST of CSPI05G26150 vs. NCBI nr
Match: XP_023541762.1 (vacuolar protein sorting-associated protein 60.1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 435.6 bits (1119), Expect = 2.7e-118 Identity = 227/237 (95.78%), Postives = 232/237 (97.89%), Query Frame = 0
BLAST of CSPI05G26150 vs. TAIR 10
Match: AT3G10640.1 (SNF7 family protein ) HSP 1 Score: 388.7 bits (997), Expect = 3.5e-108 Identity = 199/237 (83.97%), Postives = 221/237 (93.25%), Query Frame = 0
BLAST of CSPI05G26150 vs. TAIR 10
Match: AT5G04850.1 (SNF7 family protein ) HSP 1 Score: 383.6 bits (984), Expect = 1.1e-106 Identity = 196/237 (82.70%), Postives = 218/237 (91.98%), Query Frame = 0
BLAST of CSPI05G26150 vs. TAIR 10
Match: AT5G04850.2 (SNF7 family protein ) HSP 1 Score: 365.2 bits (936), Expect = 4.1e-101 Identity = 196/274 (71.53%), Postives = 218/274 (79.56%), Query Frame = 0
BLAST of CSPI05G26150 vs. TAIR 10
Match: AT3G10640.2 (SNF7 family protein ) HSP 1 Score: 281.2 bits (718), Expect = 7.8e-76 Identity = 143/172 (83.14%), Postives = 159/172 (92.44%), Query Frame = 0
BLAST of CSPI05G26150 vs. TAIR 10
Match: AT4G29160.1 (SNF7 family protein ) HSP 1 Score: 77.4 bits (189), Expect = 1.7e-14 Identity = 71/224 (31.70%), Postives = 104/224 (46.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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