CSPI05G26080 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGACTGCGAGGCAACAGAAAAACCTTGAAGAAGAAGATGAAGAAGGGTTGGGAAGGGTTAGGAAGTTAGTAGATGAAAGATTCGTTAAGAAATCACCGCCGAAACCTTATGATCGGCCGCCAGATGGCATAAGAACGTCTGGAAACAATTCGTGGATCTTGAAGCTCGTTGATCCAGGTCAAAGGCTCATTTCCTCCGTGATCCGAAAATTTCCTCACCATTTAACGTCTCGTGTTTCGTCTCAAGGTTTGTTATGTTAAAACTTGTGTATGATTTTCCTTATGGCTCTGTAGTGGATCATTCACAGACGTTACTACTGGAGTTCGTTTTTCTGATCATCCATCTAAGAATACTTACGTACTATATTTAAGACTGTTTTTCTTTTACGAACTTTATTAGATAAGTAGCATCTGATTTTGTTATTTCCAAGAGTAATCTGCTCGTTTATTATTATTTTTTCTTTCATGCATCAGAATCAAGCCAGTCAAGAAAGGATGACAACAAGGTCGATGTAACAGTAAGTAGATGA ATGGTGACTGCGAGGCAACAGAAAAACCTTGAAGAAGAAGATGAAGAAGGGTTGGGAAGGGTTAGGAAGTTAGTAGATGAAAGATTCGTTAAGAAATCACCGCCGAAACCTTATGATCGGCCGCCAGATGGCATAAGAACGTCTGGAAACAATTCGTGGATCTTGAAGCTCGTTGATCCAGGTCAAAGGCTCATTTCCTCCGTGATCCGAAAATTTCCTCACCATTTAACGTCTCGTGTTTCGTCTCAAGAATCAAGCCAGTCAAGAAAGGATGACAACAAGGTCGATGTAACAGTAAGTAGATGA ATGGTGACTGCGAGGCAACAGAAAAACCTTGAAGAAGAAGATGAAGAAGGGTTGGGAAGGGTTAGGAAGTTAGTAGATGAAAGATTCGTTAAGAAATCACCGCCGAAACCTTATGATCGGCCGCCAGATGGCATAAGAACGTCTGGAAACAATTCGTGGATCTTGAAGCTCGTTGATCCAGGTCAAAGGCTCATTTCCTCCGTGATCCGAAAATTTCCTCACCATTTAACGTCTCGTGTTTCGTCTCAAGAATCAAGCCAGTCAAGAAAGGATGACAACAAGGTCGATGTAACAGTAAGTAGATGA MVTARQQKNLEEEDEEGLGRVRKLVDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDPGQRLISSVIRKFPHHLTSRVSSQESSQSRKDDNKVDVTVSR* Homology
BLAST of CSPI05G26080 vs. ExPASy TrEMBL
Match: A0A0A0KRB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613430 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.2e-46 Identity = 100/109 (91.74%), Postives = 101/109 (92.66%), Query Frame = 0
BLAST of CSPI05G26080 vs. ExPASy TrEMBL
Match: A0A1S3BFS9 (nuclear pore complex protein NUP1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489364 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 6.1e-33 Identity = 82/109 (75.23%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of CSPI05G26080 vs. ExPASy TrEMBL
Match: A0A5D3CFP1 (Nuclear pore complex protein NUP1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001780 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 6.1e-33 Identity = 82/109 (75.23%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of CSPI05G26080 vs. ExPASy TrEMBL
Match: A0A5A7SZK9 (Nuclear pore complex protein NUP1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G006520 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 6.1e-33 Identity = 82/109 (75.23%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of CSPI05G26080 vs. ExPASy TrEMBL
Match: A0A6J1GZB0 (nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458242 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24 Identity = 67/108 (62.04%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of CSPI05G26080 vs. NCBI nr
Match: XP_011656263.1 (nuclear pore complex protein NUP1 [Cucumis sativus] >XP_031741373.1 nuclear pore complex protein NUP1 [Cucumis sativus] >KAE8648811.1 hypothetical protein Csa_009344 [Cucumis sativus]) HSP 1 Score: 188.0 bits (476), Expect = 4.1e-44 Identity = 97/106 (91.51%), Postives = 98/106 (92.45%), Query Frame = 0
BLAST of CSPI05G26080 vs. NCBI nr
Match: XP_008446727.1 (PREDICTED: nuclear pore complex protein NUP1 isoform X1 [Cucumis melo] >XP_008446728.1 PREDICTED: nuclear pore complex protein NUP1 isoform X1 [Cucumis melo] >KAA0034635.1 nuclear pore complex protein NUP1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 1.3e-32 Identity = 82/109 (75.23%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of CSPI05G26080 vs. NCBI nr
Match: TYK09186.1 (nuclear pore complex protein NUP1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 1.3e-32 Identity = 82/109 (75.23%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of CSPI05G26080 vs. NCBI nr
Match: XP_038893389.1 (nuclear pore complex protein NUP1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 127.1 bits (318), Expect = 8.7e-26 Identity = 72/105 (68.57%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of CSPI05G26080 vs. NCBI nr
Match: XP_038893390.1 (nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 127.1 bits (318), Expect = 8.7e-26 Identity = 72/105 (68.57%), Postives = 78/105 (74.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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