CSPI05G19590 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G19590
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	H15 domain-containing protein
Location	Chr5: 20851380 .. 20852061 (+)
RNA-Seq Expression	CSPI05G19590
Synteny	CSPI05G19590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTTCTCAATCCCAACACTCTTCCATTCGTCCGCCGCCCGATAATCCCTCGTCTTCCTCTTCTAACGCACCGCATTCTGATCTCCGTCATTCACTCATAGCGGGGAGGTTCAGAGATGCCCTCTTCTCCGCCGTCGCTCTCAAATATTCAACCAATAATGGCACCGCCCACTCTTTGCCCTTCCACTCCGATCAGTTCAAGTCTGTTATCGACTGCCGCATTCATGAGAACTTTCCCTCCTTTCGAACTCCTACACATCGTCCTTATGCCTCGGTAACTTTCTTTCATATTGCTTGTCTTTTCTGTCGATTAAGATTTTAAAGTTTATTTGTACTTTATACTTTTTGTTTTTATGGATTTGACATTGGGAGGAAATTTGGTGGTCGTTATGGTTGGAATTGAAGCAATGGTTGTTGATGAATTGACATTTTTGGGAATGTAGATGATACTGAGAGCAATAGCTGAAGTTGGAGGGGAAGATGGGTTGAGTGAGGAGTCAATATCAGAGTTTATCGTGAATGAGTATGAGGACTTGCCATGGGCACACTCAGCGTATTTGCGTCGCCATTTGGGGAAGCTCTGTGAAAATGGGGAGCTAGTGAAATTAAAATGTGGGAGGTATAACTTGAAGATGGAGGATAAGGGAATAAAGAGGAAGAAAGGGAGGAGAAAATAA

mRNA sequence

ATGGAGATTTCTCAATCCCAACACTCTTCCATTCGTCCGCCGCCCGATAATCCCTCGTCTTCCTCTTCTAACGCACCGCATTCTGATCTCCGTCATTCACTCATAGCGGGGAGGTTCAGAGATGCCCTCTTCTCCGCCGTCGCTCTCAAATATTCAACCAATAATGGCACCGCCCACTCTTTGCCCTTCCACTCCGATCAGTTCAAGTCTGTTATCGACTGCCGCATTCATGAGAACTTTCCCTCCTTTCGAACTCCTACACATCGTCCTTATGCCTCGATGATACTGAGAGCAATAGCTGAAGTTGGAGGGGAAGATGGGTTGAGTGAGGAGTCAATATCAGAGTTTATCGTGAATGAGTATGAGGACTTGCCATGGGCACACTCAGCGTATTTGCGTCGCCATTTGGGGAAGCTCTGTGAAAATGGGGAGCTAGTGAAATTAAAATGTGGGAGGTATAACTTGAAGATGGAGGATAAGGGAATAAAGAGGAAGAAAGGGAGGAGAAAATAA

Coding sequence (CDS)

ATGGAGATTTCTCAATCCCAACACTCTTCCATTCGTCCGCCGCCCGATAATCCCTCGTCTTCCTCTTCTAACGCACCGCATTCTGATCTCCGTCATTCACTCATAGCGGGGAGGTTCAGAGATGCCCTCTTCTCCGCCGTCGCTCTCAAATATTCAACCAATAATGGCACCGCCCACTCTTTGCCCTTCCACTCCGATCAGTTCAAGTCTGTTATCGACTGCCGCATTCATGAGAACTTTCCCTCCTTTCGAACTCCTACACATCGTCCTTATGCCTCGATGATACTGAGAGCAATAGCTGAAGTTGGAGGGGAAGATGGGTTGAGTGAGGAGTCAATATCAGAGTTTATCGTGAATGAGTATGAGGACTTGCCATGGGCACACTCAGCGTATTTGCGTCGCCATTTGGGGAAGCTCTGTGAAAATGGGGAGCTAGTGAAATTAAAATGTGGGAGGTATAACTTGAAGATGGAGGATAAGGGAATAAAGAGGAAGAAAGGGAGGAGAAAATAA

Protein sequence

MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK*

Homology

[Close]

BLAST of CSPI05G19590 vs. ExPASy Swiss-Prot
Match: Q9FYS5 (HMG-Y-related protein A OS=Zea mays OX=4577 GN=HMGIY2 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 90  PYASMILRAIAEVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENGELVKLK 149
           PY  MIL AI  +  + G ++ +IS++I  +Y  LP AH++ L  HL ++ E+GELV LK
Sbjct: 14  PYPEMILAAIEGLDDKSGSNKSAISKYIEGKYGSLPPAHASLLTAHLARMKESGELVFLK 73

Query: 150 CGRYNLKMEDKGIKRKKGR 169
              +     D   KR +GR
Sbjct: 74  NNYFRAGAPDAPPKRGRGR 92

[Close]

BLAST of CSPI05G19590 vs. ExPASy TrEMBL
Match: A0A0A0KPL0 (H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G570430 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.4e-79
Identity = 151/170 (88.82%), Postives = 157/170 (92.35%), Query Frame = 0


Query: 1   MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHS 60
           MEISQSQ SSI PPPDN +SSSS  PHSD RHSLIAGRFRDALFSAVA KYS NNGTAHS
Sbjct: 1   MEISQSQLSSIHPPPDNLTSSSSKPPHSDHRHSLIAGRFRDALFSAVAAKYSINNGTAHS 60

Query: 61  LPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNE 120
           LPF SDQFKSVIDCRIHENFPSFRTPTH PYASMILRAIAEVG EDGLSEESIS FI+NE
Sbjct: 61  LPFRSDQFKSVIDCRIHENFPSFRTPTHLPYASMILRAIAEVGEEDGLSEESISGFIMNE 120

Query: 121 YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK 171
           Y+DLPWAHSAYLRRHLGKLCENGE+VKLKCGRYN K+EDKG+KRKKGRRK
Sbjct: 121 YKDLPWAHSAYLRRHLGKLCENGEIVKLKCGRYNFKVEDKGVKRKKGRRK 170

[Close]

BLAST of CSPI05G19590 vs. ExPASy TrEMBL
Match: A0A5D3E3L6 (Transcription regulatory protein SNF2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00270 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.2e-75
Identity = 150/170 (88.24%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 1   MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHS 60
           MEIS SQ SSIRPPP+N SS SSNAPHSD RHSLIAGR RDALFSAVA KYST NGTAHS
Sbjct: 1   MEISPSQLSSIRPPPENLSSPSSNAPHSDHRHSLIAGRLRDALFSAVAAKYST-NGTAHS 60

Query: 61  LPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNE 120
           LPF SDQFKSVIDCR+ ENFPSF+TPTH PYASMI RAIAEVG EDGLSEESISEFIVNE
Sbjct: 61  LPFLSDQFKSVIDCRLRENFPSFQTPTHLPYASMIQRAIAEVGEEDGLSEESISEFIVNE 120

Query: 121 YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK 171
           YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYN K+EDKG+KRKK RRK
Sbjct: 121 YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNFKVEDKGVKRKKRRRK 169

[Close]

BLAST of CSPI05G19590 vs. ExPASy TrEMBL
Match: A0A6J1K0W5 (uncharacterized protein LOC111489634 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489634 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.7e-62
Identity = 127/170 (74.71%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHS 60
           ME SQ   S+I  PP+N    SS  PHSD R+SLIAGRFRDALFSA A KY+T NG+AHS
Sbjct: 18  MENSQPHLSTIPTPPENSPPPSSVTPHSDHRYSLIAGRFRDALFSAAAAKYAT-NGSAHS 77

Query: 61  LPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNE 120
           LPF S+QFKSVI+C +HENFPSFRTPTH PYASMI +AIAEVG EDGLSEE ISEFIVNE
Sbjct: 78  LPFPSEQFKSVIECCLHENFPSFRTPTHLPYASMIQKAIAEVGEEDGLSEELISEFIVNE 137

Query: 121 YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK 171
           Y+DLPWAH A+LRRHLGKLCE+GELVK KCG+YN K+E K +KRKK RRK
Sbjct: 138 YKDLPWAHPAFLRRHLGKLCESGELVKSKCGKYNFKVEGKEVKRKKRRRK 186

[Close]

BLAST of CSPI05G19590 vs. ExPASy TrEMBL
Match: A0A6J1FEI4 (uncharacterized protein LOC111444998 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444998 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.3e-61
Identity = 125/170 (73.53%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHS 60
           ME SQ   S+I  PP+N    SS  PHSD R+SLIAGRFRDALFSA A KY+T NG+AHS
Sbjct: 1   MENSQPHLSTIPTPPENSPPPSSVTPHSDHRYSLIAGRFRDALFSAAAAKYAT-NGSAHS 60

Query: 61  LPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNE 120
           LPF S+QFKSVI+C +H+NFPSFRTPTH PYASMI +AIAE+G EDGLSEE ISEFIVNE
Sbjct: 61  LPFPSEQFKSVIECCLHQNFPSFRTPTHLPYASMIQKAIAEMGEEDGLSEELISEFIVNE 120

Query: 121 YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK 171
           Y+DLPWAH A+LRRHLGKLCE+GELVK KCG+YN K+E K +KRKK RRK
Sbjct: 121 YKDLPWAHPAFLRRHLGKLCESGELVKSKCGKYNFKVEGKEVKRKKRRRK 169

[Close]

BLAST of CSPI05G19590 vs. ExPASy TrEMBL
Match: A0A6J1DFJ3 (uncharacterized protein LOC111020032 OS=Momordica charantia OX=3673 GN=LOC111020032 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.9e-49
Identity = 104/157 (66.24%), Postives = 124/157 (78.98%), Query Frame = 0


Query: 14  PPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHSLPFHSDQFKSVID 73
           P    +S  S    SD RHSL++ + RD LFSA+  KY+T +G+  SLPF S++ KS ++
Sbjct: 40  PMKRVNSVVSRPDVSDQRHSLVSRKLRDDLFSAITTKYAT-DGSNPSLPFPSEKLKSDVE 99

Query: 74  CRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNEYEDLPWAHSAYLR 133
            R+HE  PSF TPTH PYASMI RAIAEVG EDGLSEESIS+FIVNEYEDLPWAH+A LR
Sbjct: 100 RRLHEYLPSFHTPTHLPYASMIQRAIAEVGEEDGLSEESISDFIVNEYEDLPWAHAALLR 159

Query: 134 RHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK 171
           RHLGKLCE+GELVK KCGRYN ++EDKG+KRK+ RRK
Sbjct: 160 RHLGKLCESGELVKSKCGRYNFEVEDKGVKRKRRRRK 195

[Close]

BLAST of CSPI05G19590 vs. NCBI nr
Match: KAE8648608.1 (hypothetical protein Csa_009414 [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 1.9e-78
Identity = 151/170 (88.82%), Postives = 157/170 (92.35%), Query Frame = 0


Query: 1   MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHS 60
           MEISQSQ SSI PPPDN +SSSS  PHSD RHSLIAGRFRDALFSAVA KYS NNGTAHS
Sbjct: 1   MEISQSQLSSIHPPPDNLTSSSSKPPHSDHRHSLIAGRFRDALFSAVAAKYSINNGTAHS 60

Query: 61  LPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNE 120
           LPF SDQFKSVIDCRIHENFPSFRTPTH PYASMILRAIAEVG EDGLSEESIS FI+NE
Sbjct: 61  LPFRSDQFKSVIDCRIHENFPSFRTPTHLPYASMILRAIAEVGEEDGLSEESISGFIMNE 120

Query: 121 YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK 171
           Y+DLPWAHSAYLRRHLGKLCENGE+VKLKCGRYN K+EDKG+KRKKGRRK
Sbjct: 121 YKDLPWAHSAYLRRHLGKLCENGEIVKLKCGRYNFKVEDKGVKRKKGRRK 170

[Close]

BLAST of CSPI05G19590 vs. NCBI nr
Match: XP_011655461.2 (uncharacterized protein LOC105435537 isoform X1 [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 1.9e-78
Identity = 151/170 (88.82%), Postives = 157/170 (92.35%), Query Frame = 0


Query: 1   MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHS 60
           MEISQSQ SSI PPPDN +SSSS  PHSD RHSLIAGRFRDALFSAVA KYS NNGTAHS
Sbjct: 1   MEISQSQLSSIHPPPDNLTSSSSKPPHSDHRHSLIAGRFRDALFSAVAAKYSINNGTAHS 60

Query: 61  LPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNE 120
           LPF SDQFKSVIDCRIHENFPSFRTPTH PYASMILRAIAEVG EDGLSEESIS FI+NE
Sbjct: 61  LPFRSDQFKSVIDCRIHENFPSFRTPTHLPYASMILRAIAEVGEEDGLSEESISGFIMNE 120

Query: 121 YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK 171
           Y+DLPWAHSAYLRRHLGKLCENGE+VKLKCGRYN K+EDKG+KRKKGRRK
Sbjct: 121 YKDLPWAHSAYLRRHLGKLCENGEIVKLKCGRYNFKVEDKGVKRKKGRRK 170

[Close]

BLAST of CSPI05G19590 vs. NCBI nr
Match: KAA0046320.1 (transcription regulatory protein SNF2-like isoform X3 [Cucumis melo var. makuwa] >TYK30484.1 transcription regulatory protein SNF2-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 291.6 bits (745), Expect = 4.5e-75
Identity = 150/170 (88.24%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 1   MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHS 60
           MEIS SQ SSIRPPP+N SS SSNAPHSD RHSLIAGR RDALFSAVA KYST NGTAHS
Sbjct: 1   MEISPSQLSSIRPPPENLSSPSSNAPHSDHRHSLIAGRLRDALFSAVAAKYST-NGTAHS 60

Query: 61  LPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNE 120
           LPF SDQFKSVIDCR+ ENFPSF+TPTH PYASMI RAIAEVG EDGLSEESISEFIVNE
Sbjct: 61  LPFLSDQFKSVIDCRLRENFPSFQTPTHLPYASMIQRAIAEVGEEDGLSEESISEFIVNE 120

Query: 121 YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK 171
           YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYN K+EDKG+KRKK RRK
Sbjct: 121 YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNFKVEDKGVKRKKRRRK 169

[Close]

BLAST of CSPI05G19590 vs. NCBI nr
Match: XP_038907055.1 (uncharacterized protein LOC120092885 [Benincasa hispida])

HSP 1 Score: 264.2 bits (674), Expect = 7.6e-67
Identity = 135/170 (79.41%), Postives = 144/170 (84.71%), Query Frame = 0


Query: 1   MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHS 60
           ME SQ QHSSI PPP   S  SS  P SD RHSL+AGRFRDALFSAVA KYST NG+AHS
Sbjct: 1   MENSQPQHSSIPPPPGYLSPPSSMTPPSDHRHSLVAGRFRDALFSAVAAKYST-NGSAHS 60

Query: 61  LPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNE 120
            PFHS+QFKSV+DCRIHENFPSF+TPTH PYASMI RAIAE G EDGLSEESISEFIVNE
Sbjct: 61  FPFHSEQFKSVVDCRIHENFPSFQTPTHLPYASMIQRAIAEGGDEDGLSEESISEFIVNE 120

Query: 121 YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK 171
           YEDLPWAH A+LRRHLGKLCE+GELVK  CGRYN K+E  G+KRKK RRK
Sbjct: 121 YEDLPWAHPAFLRRHLGKLCESGELVKSNCGRYNFKVEGTGVKRKKRRRK 169

[Close]

BLAST of CSPI05G19590 vs. NCBI nr
Match: XP_022993719.1 (uncharacterized protein LOC111489634 isoform X1 [Cucurbita maxima])

HSP 1 Score: 247.3 bits (630), Expect = 9.7e-62
Identity = 127/170 (74.71%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MEISQSQHSSIRPPPDNPSSSSSNAPHSDLRHSLIAGRFRDALFSAVALKYSTNNGTAHS 60
           ME SQ   S+I  PP+N    SS  PHSD R+SLIAGRFRDALFSA A KY+T NG+AHS
Sbjct: 18  MENSQPHLSTIPTPPENSPPPSSVTPHSDHRYSLIAGRFRDALFSAAAAKYAT-NGSAHS 77

Query: 61  LPFHSDQFKSVIDCRIHENFPSFRTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNE 120
           LPF S+QFKSVI+C +HENFPSFRTPTH PYASMI +AIAEVG EDGLSEE ISEFIVNE
Sbjct: 78  LPFPSEQFKSVIECCLHENFPSFRTPTHLPYASMIQKAIAEVGEEDGLSEELISEFIVNE 137

Query: 121 YEDLPWAHSAYLRRHLGKLCENGELVKLKCGRYNLKMEDKGIKRKKGRRK 171
           Y+DLPWAH A+LRRHLGKLCE+GELVK KCG+YN K+E K +KRKK RRK
Sbjct: 138 YKDLPWAHPAFLRRHLGKLCESGELVKSKCGKYNFKVEGKEVKRKKRRRK 186

[Close]

BLAST of CSPI05G19590 vs. TAIR 10
Match: AT5G08780.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 84  RTPTHRPYASMILRAIAEVGGEDGLSEESISEFIVNEYEDLPWAHSAYLRRHLGKLCENG 143
           RTP H  Y++MI  AI ++  E G SE++ISEFI ++Y++LP+AH+  L  HL KL E  
Sbjct: 51  RTPDHPTYSAMIFIAIMDLNKEGGASEDAISEFIKSKYKNLPFAHTNLLSHHLAKLVEKR 110

Query: 144 ELVKLKCGR--YNLKMEDKGIKRKKGRRK 171
           E++   C    Y+L  E K +     +RK
Sbjct: 111 EIL-CDCNNDCYSLPGEKKTVASTDVQRK 138

The following BLAST results are available for this feature:

BLAST of CSPI05G19590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYS5	2.4e-07	39.24	HMG-Y-related protein A OS=Zea mays OX=4577 GN=HMGIY2 PE=1 SV=1	[more]

BLAST of CSPI05G19590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPL0	9.4e-79	88.82	H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G570430 PE=4 SV...	[more]
A0A5D3E3L6	2.2e-75	88.24	Transcription regulatory protein SNF2-like isoform X3 OS=Cucumis melo var. makuw...	[more]
A0A6J1K0W5	4.7e-62	74.71	uncharacterized protein LOC111489634 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FEI4	2.3e-61	73.53	uncharacterized protein LOC111444998 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1DFJ3	5.9e-49	66.24	uncharacterized protein LOC111020032 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of CSPI05G19590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648608.1	1.9e-78	88.82	hypothetical protein Csa_009414 [Cucumis sativus]	[more]
XP_011655461.2	1.9e-78	88.82	uncharacterized protein LOC105435537 isoform X1 [Cucumis sativus]	[more]
KAA0046320.1	4.5e-75	88.24	transcription regulatory protein SNF2-like isoform X3 [Cucumis melo var. makuwa]...	[more]
XP_038907055.1	7.6e-67	79.41	uncharacterized protein LOC120092885 [Benincasa hispida]	[more]
XP_022993719.1	9.7e-62	74.71	uncharacterized protein LOC111489634 isoform X1 [Cucurbita maxima]	[more]

BLAST of CSPI05G19590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08780.1	1.1e-10	41.57	winged-helix DNA-binding transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 85..151 e-value: 1.7E-4 score: 30.9
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 88..149 e-value: 1.7E-8 score: 34.7
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 87..157 score: 17.039909
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 84..169 e-value: 8.1E-14 score: 53.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR11467:SF109	BNAC09G47260D PROTEIN	coord: 50..165
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 50..165
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 84..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G19590.1	CSPI05G19590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006413	translational initiation
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003743	translation initiation factor activity