CSPI05G18890 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATCATTAGTCGTCTTCTCCCCCATATTCTTTTATTACGTCTCTTGCTTCCACATCTATTCCTAACACTGTTTAGGAAACTTTATCTCATCCTGTTTGGCATAGTGCAATGATTGAGGAGATGACTGTTTTAGATGATAATGGTACTTGGGATTTAGTATCTTGCTTTGCAGAAAAGAAGGCCATTGGATGTAAATGGGTGTTCGCTATCAAGGTTGATCATGATGGAGCAATGCCTTGGTTGAGTGTTGTGTTTGTCTTGTTGCGAAAGGTTATGTCCAAATCTATGAAATTGATTATTCAAATACATTTTCTCCCGACTTTTTTTTTCATGGCTGCTACCCATGATTGGCCTTTACATGAGTTTGACATACATGAGCTTGACATCAAGAATGCTTTTCTACATGGTGATCTTTAGGAGGAGGTTTATATGGAGTAGCCACCTTTGTTGCTTAGGGGGAG ATATCATTAGTCGTCTTCTCCCCCATATTCTTTTATTACGTCTCTTGCTTCCACATCTATTCCTAACACTGTTTAGGAAACTTTATCTCATCCTGTTTGGCATAGTGCAATGATTGAGGAGATGACTGTTTTAGATGATAATGGTACTTGGGATTTAGTATCTTGCTTTGCAGAAAAGAAGGCCATTGGATGTAAATGGGTGTTCGCTATCAAGGTTGATCATGATGGAGCAATGCCTTGGTTGAGTGTTGTGTTTGTCTTGTTGCGAAAGGTTATGTCCAAATCTATGAAATTGATTATTCAAATACATTTTCTCCCGACTTTTTTTTTCATGGCTGCTACCCATGATTGGCCTTTACATGAGTTTGACATACATGAGCTTGACATCAAGAATGCTTTTCTACATGGTGATCTTTAGGAGGAGGTTTATATGGAGTAGCCACCTTTGTTGCTTAGGGGGAG ATGATTGAGGAGATGACTGTTTTAGATGATAATGGTACTTGGGATTTAGTATCTTGCTTTGCAGAAAAGAAGGCCATTGGATGTAAATGGGTGTTCGCTATCAAGGTTGATCATGATGGAGCAATGCCTTGGTTGAGTGTTGTGTTTGTCTTGTTGCGAAAGGTTATGTCCAAATCTATGAAATTGATTATTCAAATACATTTTCTCCCGACTTTTTTTTTCATGGCTGCTACCCATGATTGGCCTTTACATGAGTTTGACATACATGAGCTTGACATCAAGAATGCTTTTCTACATGGTGATCTTTAG MIEEMTVLDDNGTWDLVSCFAEKKAIGCKWVFAIKVDHDGAMPWLSVVFVLLRKVMSKSMKLIIQIHFLPTFFFMAATHDWPLHEFDIHELDIKNAFLHGDL* Homology
BLAST of CSPI05G18890 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.6e-07 Identity = 35/108 (32.41%), Postives = 53/108 (49.07%), Query Frame = 0
BLAST of CSPI05G18890 vs. ExPASy TrEMBL
Match: A0A061ECC7 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Theobroma cacao OX=3641 GN=TCM_009017 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.9e-18 Identity = 55/108 (50.93%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of CSPI05G18890 vs. ExPASy TrEMBL
Match: A0A5D3E5M8 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00270 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17 Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of CSPI05G18890 vs. ExPASy TrEMBL
Match: A0A5A7T406 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00610 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.3e-16 Identity = 52/108 (48.15%), Postives = 66/108 (61.11%), Query Frame = 0
BLAST of CSPI05G18890 vs. ExPASy TrEMBL
Match: A0A061EJR6 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Theobroma cacao OX=3641 GN=TCM_020052 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.8e-16 Identity = 51/108 (47.22%), Postives = 62/108 (57.41%), Query Frame = 0
BLAST of CSPI05G18890 vs. ExPASy TrEMBL
Match: A0A6L2NF60 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Tanacetum cinerariifolium OX=118510 GN=Tci_055172 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.8e-16 Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 0
BLAST of CSPI05G18890 vs. NCBI nr
Match: EOX99943.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]) HSP 1 Score: 101.7 bits (252), Expect = 3.9e-18 Identity = 55/108 (50.93%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of CSPI05G18890 vs. NCBI nr
Match: TYK30615.1 (Copia protein [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 4.4e-17 Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of CSPI05G18890 vs. NCBI nr
Match: XP_031744754.1 (uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 5.7e-17 Identity = 55/108 (50.93%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of CSPI05G18890 vs. NCBI nr
Match: XP_031744758.1 (uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 5.7e-17 Identity = 55/108 (50.93%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of CSPI05G18890 vs. NCBI nr
Match: XP_031744753.1 (uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 5.7e-17 Identity = 55/108 (50.93%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of CSPI05G18890 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08 Identity = 34/109 (31.19%), Postives = 54/109 (49.54%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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