CSPI05G18650 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G18650
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	squamous cell carcinoma antigen recognized by T-cells 3
Location	Chr5: 19739922 .. 19741588 (-)
RNA-Seq Expression	CSPI05G18650
Synteny	CSPI05G18650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAAAAATAAATTTCCATAAAAATGAAATCGTAGTCCTCGGCAGTGTTCAGTTGTAGTCCTCGGCAGGAGCAGACTGTTTTCTTGGGGAACTTTCTCTTTGAAGTCCGACGCCATGGATGAACCCATTTCATCCAAAGCCGAAACTCCACTTCCAACTAACTCAGACCAAGGATACTCGGTAAATGGAGACGAACCCATGCCCGACCTTCCTCAGAACCCCGCCGATTCTTCTTCCTCCGACTCTGATTCTGAAGACGACGAATCCAACCAAAACCTTCACCTCCAGTCCCTTCAATCTCAGCTCTCCTCCAATCCCTCCGACTACGATGCTCACGTTCAAGTAATTTTCCTCTTCTTTCTTTAATGCCTTTCTTCCCCATCATTTCTTCACCCATTTCTGCACTTCTAACTTCTAATTTGATTTTGACGCCCTTTCCTGGTTCTTCTACTCTGTCTTTACCATTCCCACTACTTCAGTACATAAAGATTTTGAGGAAAGTTGGTGACATCGACAACCTCAGGAAAGCAAGGGAAGCAATGAGTGAGATATTTCCATTGACCCCTTCAATGTGGCAGGAATGGGCCGAGGACGAAGCATCTATTAGCACTGGGTAATCTCGTCCATTTGTTTCCTCTCTTGGCTGTTATACTGTTGCTCCCTAAATTCATTTCTGTTGTGCCATTCTTAGCATCTTCTGGGTTGGATTTGTTCCTAAGAGAACTGTTAATTTCGAAGTACTAACAAGCTCTTGAAATTTTATAAAAAAGAAAAGTGGATATTGGATTTCTCTTAATCCTTCTCTTGTTGGCAGTTGGCTATTTAACACTGGTTAATTCTGCTCTCAATGCTTTTGCAGACCCGAGGCTCTTGCTGCAATTGAGAGACTATATGAGCGAGGGGTGTTTGATTATCTGGTTTGTATTGTCGTGTCATTTGGAGATTAGCCCTTGGTTTTACGAGGCATGTTACATGTTAGACTGAAGAATGTTAGCATATTACCAATTTTACTTTTGCTGCAAGCATCAATAGTTTCTCCACATATGTCCTTTTATTCTTGAACGTAATGTGAGTTTTGAGACCTCATAGTATAAATCCATAAACTTCATCTATTGTCGAATTTAACCAATTGGATCTTGGGCTTTTACGTCCAAACATTTGTTGTTTTCTTATTTAATTTTATTTTTATTTTCAACAGCTAATTAGTTTCTTTGGGAATAAATATGGTTGTCTTTGAAATTCAGTTTTCTGCCCGAGTTTCTACTTCTAATGCATATAAGGAATCCTTTTAGAGGACAATGGTTTGCTTTGTAATTATGGCTGTTTTATTGAGAATAACGATATTTTGAACTTTGAAGTTGTAGAGGGTGTCATGATGTTTTCATTTTTTGTCTTGTTGATCATGATTACATGAGATGGTTAACTTTTCACTATGTTATGCAGTCAGTTTCTCTTTGGCTTGACTACTTAAATTTCATTCGAGAATATGATCCATTGGTGCAAGATTGTGCAACTTCTGGAATTAAAAAGGTTAGAGATTTATTTGAACGTGCTCTCACAGCCGCTGGTTTGCATTTCACTGAGGCTGAAAAATTATGGGAAGCATATAGAGATTTGGAGAAATCCATATATCAAACCATTGCTGAAACTGATGCTCAGGTTTAA

mRNA sequence

ATTTTAAAAATAAATTTCCATAAAAATGAAATCGTAGTCCTCGGCAGTGTTCAGTTGTAGTCCTCGGCAGGAGCAGACTGTTTTCTTGGGGAACTTTCTCTTTGAAGTCCGACGCCATGGATGAACCCATTTCATCCAAAGCCGAAACTCCACTTCCAACTAACTCAGACCAAGGATACTCGGTAAATGGAGACGAACCCATGCCCGACCTTCCTCAGAACCCCGCCGATTCTTCTTCCTCCGACTCTGATTCTGAAGACGACGAATCCAACCAAAACCTTCACCTCCAGTCCCTTCAATCTCAGCTCTCCTCCAATCCCTCCGACTACGATGCTCACGTTCAATACATAAAGATTTTGAGGAAAGTTGGTGACATCGACAACCTCAGGAAAGCAAGGGAAGCAATGAGTGAGATATTTCCATTGACCCCTTCAATGTGGCAGGAATGGGCCGAGGACGAAGCATCTATTAGCACTGGACCCGAGGCTCTTGCTGCAATTGAGAGACTATATGAGCGAGGGGTGTTTGATTATCTGTCAGTTTCTCTTTGGCTTGACTACTTAAATTTCATTCGAGAATATGATCCATTGGTGCAAGATTGTGCAACTTCTGGAATTAAAAAGGTTAGAGATTTATTTGAACGTGCTCTCACAGCCGCTGGTTTGCATTTCACTGAGGCTGAAAAATTATGGGAAGCATATAGAGATTTGGAGAAATCCATATATCAAACCATTGCTGAAACTGATGCTCAGGTTTAA

Coding sequence (CDS)

ATGGATGAACCCATTTCATCCAAAGCCGAAACTCCACTTCCAACTAACTCAGACCAAGGATACTCGGTAAATGGAGACGAACCCATGCCCGACCTTCCTCAGAACCCCGCCGATTCTTCTTCCTCCGACTCTGATTCTGAAGACGACGAATCCAACCAAAACCTTCACCTCCAGTCCCTTCAATCTCAGCTCTCCTCCAATCCCTCCGACTACGATGCTCACGTTCAATACATAAAGATTTTGAGGAAAGTTGGTGACATCGACAACCTCAGGAAAGCAAGGGAAGCAATGAGTGAGATATTTCCATTGACCCCTTCAATGTGGCAGGAATGGGCCGAGGACGAAGCATCTATTAGCACTGGACCCGAGGCTCTTGCTGCAATTGAGAGACTATATGAGCGAGGGGTGTTTGATTATCTGTCAGTTTCTCTTTGGCTTGACTACTTAAATTTCATTCGAGAATATGATCCATTGGTGCAAGATTGTGCAACTTCTGGAATTAAAAAGGTTAGAGATTTATTTGAACGTGCTCTCACAGCCGCTGGTTTGCATTTCACTGAGGCTGAAAAATTATGGGAAGCATATAGAGATTTGGAGAAATCCATATATCAAACCATTGCTGAAACTGATGCTCAGGTTTAA

Protein sequence

MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSLQSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQV*

Homology

[Close]

BLAST of CSPI05G18650 vs. ExPASy Swiss-Prot
Match: B3DJT0 (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Danio rerio OX=7955 GN=sart3 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30
Identity = 67/164 (40.85%), Postives = 98/164 (59.76%), Query Frame = 0


Query: 43  DSDSEDDESNQNLHLQSLQSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFP 102
           + D+ +DE      +Q L+ QLS N  DY+ HV  IK+LR+ G +  LRKAR+ MSE+FP
Sbjct: 46  EEDTSEDERENEAEIQRLEEQLSINAFDYNCHVDLIKLLRQEGKLHRLRKARQKMSELFP 105

Query: 103 LTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDC 162
           LT  +W +W +DE  I+        +  L+ER + DY+   +WL+Y+ +      +    
Sbjct: 106 LTEEIWLDWLKDEIRITEDESDREKVYELFERAIKDYVCPEIWLEYVQY-----SIGGMG 165

Query: 163 ATSGIKKVRDLFERALTAAGLHFTEAEKLWEAYRDLEKSIYQTI 207
           A  GI++VR +FERALTA GLH T+   +WEAYR+ E  I  T+
Sbjct: 166 AQGGIERVRSIFERALTAVGLHMTKGASIWEAYREFEIVILSTV 204

[Close]

BLAST of CSPI05G18650 vs. ExPASy Swiss-Prot
Match: Q9JLI8 (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus musculus OX=10090 GN=Sart3 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26
Identity = 70/183 (38.25%), Postives = 110/183 (60.11%), Query Frame = 0


Query: 24  NGDEPMPDLPQNPADSSSSDSDSEDDESNQ--NLHLQSLQSQLSSNPSDYDAHVQYIKIL 83
           +GDE   D   + A+SS+ + + E DE  +   L ++ L+ QLS N  DY+ HV+ I++L
Sbjct: 66  DGDE--EDAMASSAESSAGEDEWEYDEEEEKNQLEIERLEEQLSINGYDYNCHVELIRLL 125

Query: 84  RKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYLS 143
           R  G++  +R AR+ MSE+FPLT  +W EW  DE S++        +  L+ER V DY+ 
Sbjct: 126 RLEGELSRVRAARQKMSELFPLTEELWLEWLHDEISMAMDGLDREHVYELFERAVKDYIC 185

Query: 144 VSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGLHFTEAEKLWEAYRDLEKS 203
            ++WL+Y  +      + Q     G++KVR +FERAL++ GLH T+   +WEAYR+ E +
Sbjct: 186 PNIWLEYGQY--SVGGIGQ---KGGLEKVRSVFERALSSVGLHMTKGLAIWEAYREFESA 241

Query: 204 IYQ 205
           I +
Sbjct: 246 IVE 241

[Close]

BLAST of CSPI05G18650 vs. ExPASy Swiss-Prot
Match: Q15020 (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo sapiens OX=9606 GN=SART3 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.5e-26
Identity = 67/170 (39.41%), Postives = 102/170 (60.00%), Query Frame = 0


Query: 37  ADSSSSDSDSEDDESNQ--NLHLQSLQSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAR 96
           A+SS  + + E DE  +   L ++ L+ QLS N  DY+ HV  I++LR  G++  +R AR
Sbjct: 76  AESSPGEYEWEYDEEEEKNQLEIERLEEQLSINVYDYNCHVDLIRLLRLEGELTKVRMAR 135

Query: 97  EAMSEIFPLTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYLSVSLWLDYLNFIRE 156
           + MSEIFPLT  +W EW  DE S++        +  L+E+ V DY+  ++WL+Y  +   
Sbjct: 136 QKMSEIFPLTEELWLEWLHDEISMAQDGLDREHVYDLFEKAVKDYICPNIWLEYGQY--S 195

Query: 157 YDPLVQDCATSGIKKVRDLFERALTAAGLHFTEAEKLWEAYRDLEKSIYQ 205
              + Q     G++KVR +FERAL++ GLH T+   LWEAYR+ E +I +
Sbjct: 196 VGGIGQ---KGGLEKVRSVFERALSSVGLHMTKGLALWEAYREFESAIVE 240

[Close]

BLAST of CSPI05G18650 vs. ExPASy Swiss-Prot
Match: Q5REG1 (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Pongo abelii OX=9601 GN=SART3 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.5e-26
Identity = 67/170 (39.41%), Postives = 102/170 (60.00%), Query Frame = 0


Query: 37  ADSSSSDSDSEDDESNQ--NLHLQSLQSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAR 96
           A+SS  + + E DE  +   L ++ L+ QLS N  DY+ HV  I++LR  G++  +R AR
Sbjct: 76  AESSPGEYEWEYDEEEEKNQLEIERLEEQLSINVYDYNCHVDLIRLLRLEGELTKVRMAR 135

Query: 97  EAMSEIFPLTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYLSVSLWLDYLNFIRE 156
           + MSEIFPLT  +W EW  DE S++        +  L+E+ V DY+  ++WL+Y  +   
Sbjct: 136 QKMSEIFPLTEELWLEWLHDEISMAQDGLDREHVYDLFEKAVKDYICPNIWLEYGQY--S 195

Query: 157 YDPLVQDCATSGIKKVRDLFERALTAAGLHFTEAEKLWEAYRDLEKSIYQ 205
              + Q     G++KVR +FERAL++ GLH T+   LWEAYR+ E +I +
Sbjct: 196 VGGIGQ---KGGLEKVRSVFERALSSVGLHMTKGLALWEAYREFESAIVE 240

[Close]

BLAST of CSPI05G18650 vs. ExPASy Swiss-Prot
Match: Q9USY2 (Uncharacterized RNA-binding protein C1861.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1861.04c PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.0e-12
Identity = 45/177 (25.42%), Postives = 86/177 (48.59%), Query Frame = 0


Query: 43  DSDSEDDESNQNLHLQSLQSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFP 102
           D D ++    + L L  L      +P +YD+H++ I+ L+++     L +AR+    IFP
Sbjct: 15  DIDPQEQNEKKPLLLDELTKFTILHPYNYDSHIKLIEELKRLDKKKELSEARKTFQSIFP 74

Query: 103 LTPSMWQEWAEDEASISTGPEALAAIERLYERGVFDYLSVSLWLDYLNF---IREYDPLV 162
           L+  +W ++  DE       +    I+ L++  V DYLS+ +W  YL F   + +     
Sbjct: 75  LSEDLWVDYLLDECKNCRTLDDYVRIKTLFDLAVQDYLSIKIWCMYLEFTLNLMDTSSFE 134

Query: 163 QD-CATSGIKKVRD---LFERALTAAGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           Q+    +G+  + D   LFERA      HF++++ +W  Y +  ++    + E + +
Sbjct: 135 QEQSELNGVITLTDAHSLFERAYQTCKFHFSKSQCVWTLYLEFLQTFGDALFEGEEE 191

[Close]

BLAST of CSPI05G18650 vs. ExPASy TrEMBL
Match: A0A0A0KP58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G528420 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.9e-113
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL
Sbjct: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST
Sbjct: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVS WLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSFWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQV 214
           AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQV
Sbjct: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQV 213

[Close]

BLAST of CSPI05G18650 vs. ExPASy TrEMBL
Match: A0A5D3CUH2 (Squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001220 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.0e-106
Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISS AETPLPTNSDQG SVNGDEPMPDLPQNP+DSSSSDSDSEDDESNQNL L SL
Sbjct: 1   MDEPISSNAETPLPTNSDQGNSVNGDEPMPDLPQNPSDSSSSDSDSEDDESNQNLQLHSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSN SDYDAHVQYIK+LRKVGDIDNLRKAREAMSEIFPL+PSMWQEWA+DEASI+T
Sbjct: 61  QSQLSSNASDYDAHVQYIKLLRKVGDIDNLRKAREAMSEIFPLSPSMWQEWAKDEASINT 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRD EK+IYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDFEKAIYQTIAETDAQ 212

[Close]

BLAST of CSPI05G18650 vs. ExPASy TrEMBL
Match: A0A1S3CCC2 (squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499370 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.0e-106
Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISS AETPLPTNSDQG SVNGDEPMPDLPQNP+DSSSSDSDSEDDESNQNL L SL
Sbjct: 1   MDEPISSNAETPLPTNSDQGNSVNGDEPMPDLPQNPSDSSSSDSDSEDDESNQNLQLHSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSN SDYDAHVQYIK+LRKVGDIDNLRKAREAMSEIFPL+PSMWQEWA+DEASI+T
Sbjct: 61  QSQLSSNASDYDAHVQYIKLLRKVGDIDNLRKAREAMSEIFPLSPSMWQEWAKDEASINT 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRD EK+IYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDFEKAIYQTIAETDAQ 212

[Close]

BLAST of CSPI05G18650 vs. ExPASy TrEMBL
Match: A0A1S4E2W5 (squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499370 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.0e-106
Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISS AETPLPTNSDQG SVNGDEPMPDLPQNP+DSSSSDSDSEDDESNQNL L SL
Sbjct: 1   MDEPISSNAETPLPTNSDQGNSVNGDEPMPDLPQNPSDSSSSDSDSEDDESNQNLQLHSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSN SDYDAHVQYIK+LRKVGDIDNLRKAREAMSEIFPL+PSMWQEWA+DEASI+T
Sbjct: 61  QSQLSSNASDYDAHVQYIKLLRKVGDIDNLRKAREAMSEIFPLSPSMWQEWAKDEASINT 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRD EK+IYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDFEKAIYQTIAETDAQ 212

[Close]

BLAST of CSPI05G18650 vs. ExPASy TrEMBL
Match: A0A6J1FHD1 (squamous cell carcinoma antigen recognized by T-cells 3 OS=Cucurbita moschata OX=3662 GN=LOC111445777 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.8e-87
Identity = 170/208 (81.73%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 9   AETPLPTNSDQGYSVNGDEPMPDLPQNP----ADSSSSDSDSEDDESNQNLHLQSLQSQL 68
           A+ PL TNSD    VNGD+PMPDLPQNP    +DSSSSDSDSE DES+Q L LQ+LQS+L
Sbjct: 6   AQLPLSTNSDDENLVNGDDPMPDLPQNPTSPASDSSSSDSDSEVDESDQKLQLQTLQSEL 65

Query: 69  SSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASISTGPEA 128
           SSNPS+YDAHVQYIK+LRKVGDIDNLRKAREAMSE+FPLTPSMWQEWA+DEASISTGPE 
Sbjct: 66  SSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASISTGPED 125

Query: 129 LAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGLH 188
           +AAIERLYERGVFDYLSVSLW DYLNF++EYDP+V+D ATS IKK RDLFERALTAAGLH
Sbjct: 126 VAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKARDLFERALTAAGLH 185

Query: 189 FTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           FTEAEKLWEAYR+ EKSIYQ+I ETD Q
Sbjct: 186 FTEAEKLWEAYREFEKSIYQSIDETDTQ 213

[Close]

BLAST of CSPI05G18650 vs. NCBI nr
Match: XP_004142811.2 (squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [Cucumis sativus] >KAE8648565.1 hypothetical protein Csa_009024 [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL
Sbjct: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST
Sbjct: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVS WLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSFWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 212

[Close]

BLAST of CSPI05G18650 vs. NCBI nr
Match: XP_011655427.1 (squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL
Sbjct: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST
Sbjct: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVS WLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSFWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 212

[Close]

BLAST of CSPI05G18650 vs. NCBI nr
Match: XP_016902571.1 (PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 2.1e-106
Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISS AETPLPTNSDQG SVNGDEPMPDLPQNP+DSSSSDSDSEDDESNQNL L SL
Sbjct: 1   MDEPISSNAETPLPTNSDQGNSVNGDEPMPDLPQNPSDSSSSDSDSEDDESNQNLQLHSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSN SDYDAHVQYIK+LRKVGDIDNLRKAREAMSEIFPL+PSMWQEWA+DEASI+T
Sbjct: 61  QSQLSSNASDYDAHVQYIKLLRKVGDIDNLRKAREAMSEIFPLSPSMWQEWAKDEASINT 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRD EK+IYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDFEKAIYQTIAETDAQ 212

[Close]

BLAST of CSPI05G18650 vs. NCBI nr
Match: XP_008460582.1 (PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 2.1e-106
Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISS AETPLPTNSDQG SVNGDEPMPDLPQNP+DSSSSDSDSEDDESNQNL L SL
Sbjct: 1   MDEPISSNAETPLPTNSDQGNSVNGDEPMPDLPQNPSDSSSSDSDSEDDESNQNLQLHSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSN SDYDAHVQYIK+LRKVGDIDNLRKAREAMSEIFPL+PSMWQEWA+DEASI+T
Sbjct: 61  QSQLSSNASDYDAHVQYIKLLRKVGDIDNLRKAREAMSEIFPLSPSMWQEWAKDEASINT 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRD EK+IYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDFEKAIYQTIAETDAQ 212

[Close]

BLAST of CSPI05G18650 vs. NCBI nr
Match: TYK15070.1 (squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 396.0 bits (1016), Expect = 2.1e-106
Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MDEPISSKAETPLPTNSDQGYSVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSL 60
           MDEPISS AETPLPTNSDQG SVNGDEPMPDLPQNP+DSSSSDSDSEDDESNQNL L SL
Sbjct: 1   MDEPISSNAETPLPTNSDQGNSVNGDEPMPDLPQNPSDSSSSDSDSEDDESNQNLQLHSL 60

Query: 61  QSQLSSNPSDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASIST 120
           QSQLSSN SDYDAHVQYIK+LRKVGDIDNLRKAREAMSEIFPL+PSMWQEWA+DEASI+T
Sbjct: 61  QSQLSSNASDYDAHVQYIKLLRKVGDIDNLRKAREAMSEIFPLSPSMWQEWAKDEASINT 120

Query: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180
           GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA
Sbjct: 121 GPEALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTA 180

Query: 181 AGLHFTEAEKLWEAYRDLEKSIYQTIAETDAQ 213
           AGLHFTEAEKLWEAYRD EK+IYQTIAETDAQ
Sbjct: 181 AGLHFTEAEKLWEAYRDFEKAIYQTIAETDAQ 212

[Close]

BLAST of CSPI05G18650 vs. TAIR 10
Match: AT4G24270.1 (EMBRYO DEFECTIVE 140 )

HSP 1 Score: 194.5 bits (493), Expect = 8.7e-50
Identity = 103/204 (50.49%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 10  ETPLPTNSDQGY-SVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSLQSQLSSNP 69
           +T L +N+DQ     + + P    P +  DS  SDSDSE DE+  N  + +L+S+LS+NP
Sbjct: 5   DTELVSNTDQKMEDASAENPARADPPSSDDSGDSDSDSE-DEAESNQQIVTLESELSANP 64

Query: 70  SDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASISTGPEALAAI 129
            +YDA+VQYIK+LRK  +++ LR+AREAMS IFPL+PS+W EWA DEAS++   E +  I
Sbjct: 65  YNYDAYVQYIKLLRKTANLEKLRQAREAMSAIFPLSPSLWLEWARDEASLAAS-ENVPEI 124

Query: 130 ERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGLHFTEA 189
             LYERG+ DY SVSLW DYL+F+ E+DP V+   + GI K+R LFERA+ AAG H TE 
Sbjct: 125 VMLYERGLSDYQSVSLWCDYLSFMLEFDPSVRGYPSEGISKMRSLFERAIPAAGFHVTEG 184

Query: 190 EKLWEAYRDLEKSIYQTIAETDAQ 213
            ++WE YR+ E+ +  TI E D +
Sbjct: 185 NRIWEGYREFEQGVLATIDEADIE 206

[Close]

BLAST of CSPI05G18650 vs. TAIR 10
Match: AT4G24270.2 (EMBRYO DEFECTIVE 140 )

HSP 1 Score: 194.5 bits (493), Expect = 8.7e-50
Identity = 103/204 (50.49%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 10  ETPLPTNSDQGY-SVNGDEPMPDLPQNPADSSSSDSDSEDDESNQNLHLQSLQSQLSSNP 69
           +T L +N+DQ     + + P    P +  DS  SDSDSE DE+  N  + +L+S+LS+NP
Sbjct: 5   DTELVSNTDQKMEDASAENPARADPPSSDDSGDSDSDSE-DEAESNQQIVTLESELSANP 64

Query: 70  SDYDAHVQYIKILRKVGDIDNLRKAREAMSEIFPLTPSMWQEWAEDEASISTGPEALAAI 129
            +YDA+VQYIK+LRK  +++ LR+AREAMS IFPL+PS+W EWA DEAS++   E +  I
Sbjct: 65  YNYDAYVQYIKLLRKTANLEKLRQAREAMSAIFPLSPSLWLEWARDEASLAAS-ENVPEI 124

Query: 130 ERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGLHFTEA 189
             LYERG+ DY SVSLW DYL+F+ E+DP V+   + GI K+R LFERA+ AAG H TE 
Sbjct: 125 VMLYERGLSDYQSVSLWCDYLSFMLEFDPSVRGYPSEGISKMRSLFERAIPAAGFHVTEG 184

Query: 190 EKLWEAYRDLEKSIYQTIAETDAQ 213
            ++WE YR+ E+ +  TI E D +
Sbjct: 185 NRIWEGYREFEQGVLATIDEADIE 206

The following BLAST results are available for this feature:

BLAST of CSPI05G18650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3DJT0	1.1e-30	40.85	Squamous cell carcinoma antigen recognized by T-cells 3 OS=Danio rerio OX=7955 G...	[more]
Q9JLI8	1.3e-26	38.25	Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus musculus OX=10090...	[more]
Q15020	6.5e-26	39.41	Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo sapiens OX=9606 ...	[more]
Q5REG1	6.5e-26	39.41	Squamous cell carcinoma antigen recognized by T-cells 3 OS=Pongo abelii OX=9601 ...	[more]
Q9USY2	7.0e-12	25.42	Uncharacterized RNA-binding protein C1861.04c OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of CSPI05G18650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP58	1.9e-113	99.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G528420 PE=4 SV=1	[more]
A0A5D3CUH2	1.0e-106	94.34	Squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 OS=Cucumis me...	[more]
A0A1S3CCC2	1.0e-106	94.34	squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 OS=Cucumis me...	[more]
A0A1S4E2W5	1.0e-106	94.34	squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 OS=Cucumis me...	[more]
A0A6J1FHD1	1.8e-87	81.73	squamous cell carcinoma antigen recognized by T-cells 3 OS=Cucurbita moschata OX...	[more]

BLAST of CSPI05G18650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142811.2	1.2e-112	99.53	squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [Cucumis sati...	[more]
XP_011655427.1	1.2e-112	99.53	squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 [Cucumis sati...	[more]
XP_016902571.1	2.1e-106	94.34	PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 [C...	[more]
XP_008460582.1	2.1e-106	94.34	PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [C...	[more]
TYK15070.1	2.1e-106	94.34	squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [Cucumis melo...	[more]

BLAST of CSPI05G18650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24270.1	8.7e-50	50.49	EMBRYO DEFECTIVE 140	[more]
AT4G24270.2	8.7e-50	50.49	EMBRYO DEFECTIVE 140	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 85..117 e-value: 36.0 score: 11.3 coord: 165..201 e-value: 0.56 score: 19.3 coord: 123..154 e-value: 11.0 score: 15.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 61..213 e-value: 9.6E-38 score: 131.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 62..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR17204	PRE-MRNA PROCESSING PROTEIN PRP39-RELATED	coord: 24..207
None	No IPR available	PANTHER	PTHR17204:SF25	EMBRYO DEFECTIVE 140	coord: 24..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G18650.1	CSPI05G18650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding