CSPI05G18580 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G18580
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	CLP protease regulatory subunit CLPX2, mitochondrial isoform X2
Location	Chr5: 19625413 .. 19626309 (-)
RNA-Seq Expression	CSPI05G18580
Synteny	CSPI05G18580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCTATCCTAAAACAACTTAGTAAGGGAAAACACGGCCCCACACCTTCTTGTTTCCCTTCCAACTACAAACTGCCATTAGAAAATGTCATCACGCAGTCTGAGCTCACACTTCAACTTTCCCCGGCGCAGCTCATTTCTTCCATCTTCCCAATTCCCCAACCAACTTCGAAACTCATAAAATCATCGCATCAGATTACTCCCAAAAATCACTATGATTCCACGATTCAGATTCAAGAACACCCATGTCATCAAGCTTTTCACATCAATCAGAACTATCACCACCACTGACTCCCTCTTCCACCACCGCTTCTTAACTCCAGGTCCGTCTAAACCCCATGCCGCCCCCCGCTCCGCCGTATTCACCCTTTGGTTTTCCCAGAAACGCCACAGTTGGAAAGGTGCCTCCGACTATGATTACATTAGGGCTGATGTCAACTGTCCAAGGTGCTCCAAGCAAATGCCTGTCATCTTCTCCAATCGTCCCTTGTCCATTACCGGTCGGGAGACTGGCGTCTATCAAGCTCTCAATCTCTGCCCTAATTGCAAAACTGCATTCTATTTTAGACCCTTGAAGTTGGTTCCTTTGCACGGAACTTTTATTGAGATTGGTAGGGTTAAGGGCGCCAGGGACTTGGATCACGATGCCGATAATGAATCGAATCAACCCACCAAAGGAGATATTGGCGCCAATTGTGCTGATGATTTTGCCTTGCCTCCACGGCGGAATGGTAGTTGTGGCGGTAGCGATGATAACCTGGGTTCGGTGGAGAGTGATGGTGTTCAAAAGGATGAGGCCAGTTTAGGAATGCAGTTGCTAACTCCCAAGGAAATTTCTCTGGCGCTGGATAAATTCGTCGTTGGACAAGAAAAGGCCAAGAAGGTTGGTTTTGGGTGA

mRNA sequence

GAGCTATCCTAAAACAACTTAGTAAGGGAAAACACGGCCCCACACCTTCTTGTTTCCCTTCCAACTACAAACTGCCATTAGAAAATGTCATCACGCAGTCTGAGCTCACACTTCAACTTTCCCCGGCGCAGCTCATTTCTTCCATCTTCCCAATTCCCCAACCAACTTCGAAACTCATAAAATCATCGCATCAGATTACTCCCAAAAATCACTATGATTCCACGATTCAGATTCAAGAACACCCATGTCATCAAGCTTTTCACATCAATCAGAACTATCACCACCACTGACTCCCTCTTCCACCACCGCTTCTTAACTCCAGGTCCGTCTAAACCCCATGCCGCCCCCCGCTCCGCCGTATTCACCCTTTGGTTTTCCCAGAAACGCCACAGTTGGAAAGGTGCCTCCGACTATGATTACATTAGGGCTGATGTCAACTGTCCAAGGTGCTCCAAGCAAATGCCTGTCATCTTCTCCAATCGTCCCTTGTCCATTACCGGTCGGGAGACTGGCGTCTATCAAGCTCTCAATCTCTGCCCTAATTGCAAAACTGCATTCTATTTTAGACCCTTGAAGTTGGTTCCTTTGCACGGAACTTTTATTGAGATTGGTAGGGTTAAGGGCGCCAGGGACTTGGATCACGATGCCGATAATGAATCGAATCAACCCACCAAAGGAGATATTGGCGCCAATTGTGCTGATGATTTTGCCTTGCCTCCACGGCGGAATGGTAGTTGTGGCGGTAGCGATGATAACCTGGGTTCGGTGGAGAGTGATGGTGTTCAAAAGGATGAGGCCAGTTTAGGAATGCAGTTGCTAACTCCCAAGGAAATTTCTCTGGCGCTGGATAAATTCGTCGTTGGACAAGAAAAGGCCAAGAAGGTTGGTTTTGGGTGA

Coding sequence (CDS)

ATGATTCCACGATTCAGATTCAAGAACACCCATGTCATCAAGCTTTTCACATCAATCAGAACTATCACCACCACTGACTCCCTCTTCCACCACCGCTTCTTAACTCCAGGTCCGTCTAAACCCCATGCCGCCCCCCGCTCCGCCGTATTCACCCTTTGGTTTTCCCAGAAACGCCACAGTTGGAAAGGTGCCTCCGACTATGATTACATTAGGGCTGATGTCAACTGTCCAAGGTGCTCCAAGCAAATGCCTGTCATCTTCTCCAATCGTCCCTTGTCCATTACCGGTCGGGAGACTGGCGTCTATCAAGCTCTCAATCTCTGCCCTAATTGCAAAACTGCATTCTATTTTAGACCCTTGAAGTTGGTTCCTTTGCACGGAACTTTTATTGAGATTGGTAGGGTTAAGGGCGCCAGGGACTTGGATCACGATGCCGATAATGAATCGAATCAACCCACCAAAGGAGATATTGGCGCCAATTGTGCTGATGATTTTGCCTTGCCTCCACGGCGGAATGGTAGTTGTGGCGGTAGCGATGATAACCTGGGTTCGGTGGAGAGTGATGGTGTTCAAAAGGATGAGGCCAGTTTAGGAATGCAGTTGCTAACTCCCAAGGAAATTTCTCTGGCGCTGGATAAATTCGTCGTTGGACAAGAAAAGGCCAAGAAGGTTGGTTTTGGGTGA

Protein sequence

MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHSWKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPLKLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDDNLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKVGFG*

Homology

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BLAST of CSPI05G18580 vs. ExPASy Swiss-Prot
Match: F4K7F6 (CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX2 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.5e-41
Identity = 106/227 (46.70%), Postives = 131/227 (57.71%), Query Frame = 0


Query: 13  IKLFTSIRTITTTDSLFH-HRFLTPGPSKPH---AAPRSAVFTLWFSQKRHSWK------ 72
           I  F S +TIT++  L    RFL    S PH     P S       S  R  W       
Sbjct: 7   ISRFVSRKTITSSSLLSRSFRFLLSVDSPPHIPLLRPSSNTLIPSSSFSRRIWDSCSGGG 66

Query: 73  ---GASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRP 132
              G  DYD+IR+DVNCPRCS QM VIFSNRPLS+T RE G+YQA+N C  CKTAFYFRP
Sbjct: 67  GGGGGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREPGIYQAVNFCSQCKTAFYFRP 126

Query: 133 LKLVPLHGTFIEIGRVKGARDLDHDADNESNQ--PTKGDIGANCADDFALPPRRNGSCGG 192
            KL PL G+FIE+G+VKG  D DHD D++  +  P    I    +D+            G
Sbjct: 127 FKLSPLQGSFIELGKVKGTDD-DHDDDDDDQKSFPRNWKIQGLRSDE-----------DG 186

Query: 193 SDDNLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 225
            D +    ES+G  K++ S+ ++L TPKEI   LD+FV+GQEKAKKV
Sbjct: 187 EDADEEEDESNGGDKEKQSV-IKLPTPKEICQGLDEFVIGQEKAKKV 220

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BLAST of CSPI05G18580 vs. ExPASy Swiss-Prot
Match: Q66GN9 (CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX3 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.7e-19
Identity = 77/241 (31.95%), Postives = 104/241 (43.15%), Query Frame = 0


Query: 43  AAPRSAVFTLWFSQKRHSWKGASDYDY------IRADVNCPRCSKQMPVIFSNRPL---- 102
           + PR  +   + S++     G  D+        +RA+ NCPRCSKQM ++FSNR      
Sbjct: 33  SCPRRRIQERFKSEQGGGGGGGDDFPVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSN 92

Query: 103 ----------SITGRETGVYQALNLCPNCKTAFYFRPLKLVPLHGTFIEIGRVKGARDLD 162
                     S  G +T  +Q++N CP CKTA+ F P  + PL GTFIEIGRV+      
Sbjct: 93  LLQRPDDSDSSGAGDKTN-FQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTT 152

Query: 163 HDA---------DNESNQPTKG----------------DIGANCADDFALPPRR------ 222
            +A            S  P +G                  GA   +D++ PP        
Sbjct: 153 TNATTSKSTRKQQQHSKDPNQGFNYRNKLRSSFWDTLRSYGAEPPEDWSPPPPHSPLNSS 212

Query: 223 -------NGSCGGSDDN-LGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKK 225
                  N S    D + L    +D  +   A LG    TPKEI   LDKFV+GQ +AKK
Sbjct: 213 PPNTIPVNASPSAVDTSPLPDAVNDVSRWGGAGLGRDFPTPKEICKWLDKFVIGQSRAKK 272

[Close]

BLAST of CSPI05G18580 vs. ExPASy TrEMBL
Match: A0A0A0KUJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G527890 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.1e-127
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60
           MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS
Sbjct: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60

Query: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120
           WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL
Sbjct: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120

Query: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180
           KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD
Sbjct: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180

Query: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 225
           NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV
Sbjct: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 224

[Close]

BLAST of CSPI05G18580 vs. ExPASy TrEMBL
Match: A0A1S4E3L9 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X6 OS=Cucumis melo OX=3656 GN=LOC103499373 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 6.3e-123
Identity = 215/226 (95.13%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60
           MIPRFRF NTH IKLFTSIRTITTTDSLFHHRFLTP PSKPHAAPRSAVFTLW SQKRHS
Sbjct: 1   MIPRFRFNNTHFIKLFTSIRTITTTDSLFHHRFLTPVPSKPHAAPRSAVFTLWLSQKRHS 60

Query: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120
           WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL
Sbjct: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120

Query: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180
           KLVPLHGTFIEIGRVKGARDLDHDADNESNQPT+GDIGANCADDFALPPR+NGSCGG DD
Sbjct: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTRGDIGANCADDFALPPRQNGSCGGGDD 180

Query: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKVGF 227
           NLGSVES+GV KDEASLGMQLLTPKEISLALDKFVVGQEKAKK G+
Sbjct: 181 NLGSVESNGVHKDEASLGMQLLTPKEISLALDKFVVGQEKAKKAGY 226

[Close]

BLAST of CSPI05G18580 vs. ExPASy TrEMBL
Match: A0A1S3CCW5 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X7 OS=Cucumis melo OX=3656 GN=LOC103499373 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 6.3e-123
Identity = 215/226 (95.13%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60
           MIPRFRF NTH IKLFTSIRTITTTDSLFHHRFLTP PSKPHAAPRSAVFTLW SQKRHS
Sbjct: 1   MIPRFRFNNTHFIKLFTSIRTITTTDSLFHHRFLTPVPSKPHAAPRSAVFTLWLSQKRHS 60

Query: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120
           WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL
Sbjct: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120

Query: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180
           KLVPLHGTFIEIGRVKGARDLDHDADNESNQPT+GDIGANCADDFALPPR+NGSCGG DD
Sbjct: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTRGDIGANCADDFALPPRQNGSCGGGDD 180

Query: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKVGF 227
           NLGSVES+GV KDEASLGMQLLTPKEISLALDKFVVGQEKAKK G+
Sbjct: 181 NLGSVESNGVHKDEASLGMQLLTPKEISLALDKFVVGQEKAKKAGY 226

[Close]

BLAST of CSPI05G18580 vs. ExPASy TrEMBL
Match: A0A5A7UKI0 (CLP protease regulatory subunit CLPX2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001330 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.4e-122
Identity = 215/224 (95.98%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60
           MIPRFRF NTH IKLFTSIRTITTTDSLFHHRFLTP PSKPHAAPRSAVFTLW SQKRHS
Sbjct: 1   MIPRFRFNNTHFIKLFTSIRTITTTDSLFHHRFLTPVPSKPHAAPRSAVFTLWLSQKRHS 60

Query: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120
           WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL
Sbjct: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120

Query: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180
           KLVPLHGTFIEIGRVKGARDLDHDADNESNQPT+GDIGANCADDFALPPR+NGSCGG DD
Sbjct: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTRGDIGANCADDFALPPRQNGSCGGGDD 180

Query: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 225
           NLGSVES+GV KDEASLGMQLLTPKEISLALDKFVVGQEKAKKV
Sbjct: 181 NLGSVESNGVHKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 224

[Close]

BLAST of CSPI05G18580 vs. ExPASy TrEMBL
Match: A0A1S3CCC6 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X5 OS=Cucumis melo OX=3656 GN=LOC103499373 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.4e-122
Identity = 215/224 (95.98%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60
           MIPRFRF NTH IKLFTSIRTITTTDSLFHHRFLTP PSKPHAAPRSAVFTLW SQKRHS
Sbjct: 1   MIPRFRFNNTHFIKLFTSIRTITTTDSLFHHRFLTPVPSKPHAAPRSAVFTLWLSQKRHS 60

Query: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120
           WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL
Sbjct: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120

Query: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180
           KLVPLHGTFIEIGRVKGARDLDHDADNESNQPT+GDIGANCADDFALPPR+NGSCGG DD
Sbjct: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTRGDIGANCADDFALPPRQNGSCGGGDD 180

Query: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 225
           NLGSVES+GV KDEASLGMQLLTPKEISLALDKFVVGQEKAKKV
Sbjct: 181 NLGSVESNGVHKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 224

[Close]

BLAST of CSPI05G18580 vs. NCBI nr
Match: XP_031741638.1 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X3 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 2.3e-127
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60
           MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS
Sbjct: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60

Query: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120
           WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL
Sbjct: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120

Query: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180
           KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD
Sbjct: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180

Query: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 225
           NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV
Sbjct: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 224

[Close]

BLAST of CSPI05G18580 vs. NCBI nr
Match: KAE8648563.1 (hypothetical protein Csa_009257 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 2.3e-127
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60
           MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS
Sbjct: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60

Query: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120
           WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL
Sbjct: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120

Query: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180
           KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD
Sbjct: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180

Query: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 225
           NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV
Sbjct: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 224

[Close]

BLAST of CSPI05G18580 vs. NCBI nr
Match: XP_031741637.1 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 2.3e-127
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60
           MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS
Sbjct: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60

Query: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120
           WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL
Sbjct: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120

Query: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180
           KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD
Sbjct: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180

Query: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 225
           NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV
Sbjct: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 224

[Close]

BLAST of CSPI05G18580 vs. NCBI nr
Match: XP_031741639.1 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X4 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 2.3e-127
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60
           MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS
Sbjct: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60

Query: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120
           WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL
Sbjct: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120

Query: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180
           KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD
Sbjct: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180

Query: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 225
           NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV
Sbjct: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 224

[Close]

BLAST of CSPI05G18580 vs. NCBI nr
Match: XP_004142810.1 (CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 2.3e-127
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60
           MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS
Sbjct: 1   MIPRFRFKNTHVIKLFTSIRTITTTDSLFHHRFLTPGPSKPHAAPRSAVFTLWFSQKRHS 60

Query: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120
           WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL
Sbjct: 61  WKGASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRPL 120

Query: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180
           KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD
Sbjct: 121 KLVPLHGTFIEIGRVKGARDLDHDADNESNQPTKGDIGANCADDFALPPRRNGSCGGSDD 180

Query: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 225
           NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV
Sbjct: 181 NLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 224

[Close]

BLAST of CSPI05G18580 vs. TAIR 10
Match: AT5G49840.1 (ATP-dependent Clp protease )

HSP 1 Score: 169.5 bits (428), Expect = 3.2e-42
Identity = 106/227 (46.70%), Postives = 131/227 (57.71%), Query Frame = 0


Query: 13  IKLFTSIRTITTTDSLFH-HRFLTPGPSKPH---AAPRSAVFTLWFSQKRHSWK------ 72
           I  F S +TIT++  L    RFL    S PH     P S       S  R  W       
Sbjct: 7   ISRFVSRKTITSSSLLSRSFRFLLSVDSPPHIPLLRPSSNTLIPSSSFSRRIWDSCSGGG 66

Query: 73  ---GASDYDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTAFYFRP 132
              G  DYD+IR+DVNCPRCS QM VIFSNRPLS+T RE G+YQA+N C  CKTAFYFRP
Sbjct: 67  GGGGGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREPGIYQAVNFCSQCKTAFYFRP 126

Query: 133 LKLVPLHGTFIEIGRVKGARDLDHDADNESNQ--PTKGDIGANCADDFALPPRRNGSCGG 192
            KL PL G+FIE+G+VKG  D DHD D++  +  P    I    +D+            G
Sbjct: 127 FKLSPLQGSFIELGKVKGTDD-DHDDDDDDQKSFPRNWKIQGLRSDE-----------DG 186

Query: 193 SDDNLGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKV 225
            D +    ES+G  K++ S+ ++L TPKEI   LD+FV+GQEKAKKV
Sbjct: 187 EDADEEEDESNGGDKEKQSV-IKLPTPKEICQGLDEFVIGQEKAKKV 220

[Close]

BLAST of CSPI05G18580 vs. TAIR 10
Match: AT1G33360.1 (ATP-dependent Clp protease )

HSP 1 Score: 96.7 bits (239), Expect = 2.6e-20
Identity = 77/241 (31.95%), Postives = 104/241 (43.15%), Query Frame = 0


Query: 43  AAPRSAVFTLWFSQKRHSWKGASDYDY------IRADVNCPRCSKQMPVIFSNRPL---- 102
           + PR  +   + S++     G  D+        +RA+ NCPRCSKQM ++FSNR      
Sbjct: 33  SCPRRRIQERFKSEQGGGGGGGDDFPVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSN 92

Query: 103 ----------SITGRETGVYQALNLCPNCKTAFYFRPLKLVPLHGTFIEIGRVKGARDLD 162
                     S  G +T  +Q++N CP CKTA+ F P  + PL GTFIEIGRV+      
Sbjct: 93  LLQRPDDSDSSGAGDKTN-FQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTT 152

Query: 163 HDA---------DNESNQPTKG----------------DIGANCADDFALPPRR------ 222
            +A            S  P +G                  GA   +D++ PP        
Sbjct: 153 TNATTSKSTRKQQQHSKDPNQGFNYRNKLRSSFWDTLRSYGAEPPEDWSPPPPHSPLNSS 212

Query: 223 -------NGSCGGSDDN-LGSVESDGVQKDEASLGMQLLTPKEISLALDKFVVGQEKAKK 225
                  N S    D + L    +D  +   A LG    TPKEI   LDKFV+GQ +AKK
Sbjct: 213 PPNTIPVNASPSAVDTSPLPDAVNDVSRWGGAGLGRDFPTPKEICKWLDKFVIGQSRAKK 272

The following BLAST results are available for this feature:

BLAST of CSPI05G18580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K7F6	4.5e-41	46.70	CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
Q66GN9	3.7e-19	31.95	CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana OX=...	[more]

BLAST of CSPI05G18580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUJ0	1.1e-127	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G527890 PE=4 SV=1	[more]
A0A1S4E3L9	6.3e-123	95.13	CLP protease regulatory subunit CLPX2, mitochondrial isoform X6 OS=Cucumis melo ...	[more]
A0A1S3CCW5	6.3e-123	95.13	CLP protease regulatory subunit CLPX2, mitochondrial isoform X7 OS=Cucumis melo ...	[more]
A0A5A7UKI0	2.4e-122	95.98	CLP protease regulatory subunit CLPX2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CCC6	2.4e-122	95.98	CLP protease regulatory subunit CLPX2, mitochondrial isoform X5 OS=Cucumis melo ...	[more]

BLAST of CSPI05G18580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741638.1	2.3e-127	100.00	CLP protease regulatory subunit CLPX2, mitochondrial isoform X3 [Cucumis sativus...	[more]
KAE8648563.1	2.3e-127	100.00	hypothetical protein Csa_009257 [Cucumis sativus]	[more]
XP_031741637.1	2.3e-127	100.00	CLP protease regulatory subunit CLPX2, mitochondrial isoform X1 [Cucumis sativus...	[more]
XP_031741639.1	2.3e-127	100.00	CLP protease regulatory subunit CLPX2, mitochondrial isoform X4 [Cucumis sativus...	[more]
XP_004142810.1	2.3e-127	100.00	CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 [Cucumis sativus...	[more]

BLAST of CSPI05G18580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49840.1	3.2e-42	46.70	ATP-dependent Clp protease	[more]
AT1G33360.1	2.6e-20	31.95	ATP-dependent Clp protease	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48102	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED	coord: 70..224
None	No IPR available	PANTHER	PTHR48102:SF9	ATPASE, AAA-TYPE, CORE-RELATED	coord: 70..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G18580.1	CSPI05G18580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0006508	proteolysis
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0051082	unfolded protein binding