CSPI05G18420 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G18420
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transmembrane protein
Location	Chr5: 19449505 .. 19450252 (-)
RNA-Seq Expression	CSPI05G18420
Synteny	CSPI05G18420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTTATAAATAAAGCCATAAAATCTTTTTCCAAAGGGAATTTACATTCCAAAGTGTTCATCAAAAAATTTCTTGCAGCCTTCCGATCAAGAAAAAACCACGCAGACACACAGAAATTCACAAAATGCAAGAAAGCCCATCACAAGCCACGCGGCGGCGAAGATTCGCCGTGGACGACGGAGCCGATCTAATTGACTGCTCCGGCAAGCATTGCCGATCCTGCACCGCCGGGTTGGTGGCGGATTGCGTCGCCGTCTGCTGCTGCCCCTGCTCGGTGGTCAGCTTCTTGGCTCTGGCTTTGGTCAAACTGCCGTGGATGGTCGGACGGCGGTGTCTGCAGCAGGCGAGGAAGAAGAGGAAGAAGAGGAAATTGGTTTGCCGGAGAGGGGAATGCGACGGCGCTACGACGGCGGAAACTGGTGGGTGTGTGGGAAATGAAAAGGGATTGCCGGAAGTTTCGCCGGGATCCGGCGAGGAAGATGAAACGACGGGGAATTTTAGTGCAAGATTTGAAGCAGAGAGGATTTGGTTGCAATTGTATCAAGTGGGTCAGTTGGGATTTGGAAGAGTTTCTTTCACTGGGAATTCAAACCTTTGGCCTAATTCCAATTAAGCTCTCTAAATTTAATTACTCTAATTTGTAAAGTTAGTTAATAAGGTAAAATTATTAATTTAGCATTCTATTCTTGTGTTTATTCAGTCTCTGAGTTTTTACAAAAGAAAAAATATATATATTCAAACTACATTT

mRNA sequence

CACTTATAAATAAAGCCATAAAATCTTTTTCCAAAGGGAATTTACATTCCAAAGTGTTCATCAAAAAATTTCTTGCAGCCTTCCGATCAAGAAAAAACCACGCAGACACACAGAAATTCACAAAATGCAAGAAAGCCCATCACAAGCCACGCGGCGGCGAAGATTCGCCGTGGACGACGGAGCCGATCTAATTGACTGCTCCGGCAAGCATTGCCGATCCTGCACCGCCGGGTTGGTGGCGGATTGCGTCGCCGTCTGCTGCTGCCCCTGCTCGGTGGTCAGCTTCTTGGCTCTGGCTTTGGTCAAACTGCCGTGGATGGTCGGACGGCGGTGTCTGCAGCAGGCGAGGAAGAAGAGGAAGAAGAGGAAATTGGTTTGCCGGAGAGGGGAATGCGACGGCGCTACGACGGCGGAAACTGGTGGGTGTGTGGGAAATGAAAAGGGATTGCCGGAAGTTTCGCCGGGATCCGGCGAGGAAGATGAAACGACGGGGAATTTTAGTGCAAGATTTGAAGCAGAGAGGATTTGGTTGCAATTGTATCAAGTGGGTCAGTTGGGATTTGGAAGAGTTTCTTTCACTGGGAATTCAAACCTTTGGCCTAATTCCAATTAAGCTCTCTAAATTTAATTACTCTAATTTGTAAAGTTAGTTAATAAGGTAAAATTATTAATTTAGCATTCTATTCTTGTGTTTATTCAGTCTCTGAGTTTTTACAAAAGAAAAAATATATATATTCAAACTACATTT

Coding sequence (CDS)

ATGCAAGAAAGCCCATCACAAGCCACGCGGCGGCGAAGATTCGCCGTGGACGACGGAGCCGATCTAATTGACTGCTCCGGCAAGCATTGCCGATCCTGCACCGCCGGGTTGGTGGCGGATTGCGTCGCCGTCTGCTGCTGCCCCTGCTCGGTGGTCAGCTTCTTGGCTCTGGCTTTGGTCAAACTGCCGTGGATGGTCGGACGGCGGTGTCTGCAGCAGGCGAGGAAGAAGAGGAAGAAGAGGAAATTGGTTTGCCGGAGAGGGGAATGCGACGGCGCTACGACGGCGGAAACTGGTGGGTGTGTGGGAAATGAAAAGGGATTGCCGGAAGTTTCGCCGGGATCCGGCGAGGAAGATGAAACGACGGGGAATTTTAGTGCAAGATTTGAAGCAGAGAGGATTTGGTTGCAATTGTATCAAGTGGGTCAGTTGGGATTTGGAAGAGTTTCTTTCACTGGGAATTCAAACCTTTGGCCTAATTCCAATTAA

Protein sequence

MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGGCVGNEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN*

Homology

[Close]

BLAST of CSPI05G18420 vs. ExPASy TrEMBL
Match: A0A0A0KR58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G524770 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 6.8e-87
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 86  MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 145

Query: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGGCVGNEKGLPEVSPGSGEEDE 120
           KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGAT AETGGCVGNEKGLPEVSPGSGEEDE
Sbjct: 146 KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATAAETGGCVGNEKGLPEVSPGSGEEDE 205

Query: 121 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 163
           TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Sbjct: 206 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 247

[Close]

BLAST of CSPI05G18420 vs. ExPASy TrEMBL
Match: A0A1S3C8M3 (uncharacterized protein LOC103498078 OS=Cucumis melo OX=3656 GN=LOC103498078 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.4e-85
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           MQESPS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 1   MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60

Query: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGGCVGNEKGLPEVSPGSGEEDE 120
           KLPWMVGRRCLQQARKKRKKRKLV RRGECDGAT AETGGCVGNEKGLPE+SPGSGEEDE
Sbjct: 61  KLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGGCVGNEKGLPEISPGSGEEDE 120

Query: 121 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 163
           TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Sbjct: 121 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 162

[Close]

BLAST of CSPI05G18420 vs. ExPASy TrEMBL
Match: A0A5A7T2E5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G001190 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.4e-85
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           MQESPS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 1   MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60

Query: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGGCVGNEKGLPEVSPGSGEEDE 120
           KLPWMVGRRCLQQARKKRKKRKLV RRGECDGAT AETGGCVGNEKGLPE+SPGSGEEDE
Sbjct: 61  KLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGGCVGNEKGLPEISPGSGEEDE 120

Query: 121 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 163
           TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Sbjct: 121 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 162

[Close]

BLAST of CSPI05G18420 vs. ExPASy TrEMBL
Match: A0A6J1HEE2 (uncharacterized protein LOC111463206 OS=Cucurbita moschata OX=3662 GN=LOC111463206 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.2e-64
Identity = 131/167 (78.44%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 1   MEESPSPPTRRRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60

Query: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTA-ETGGCVGNEKGLPEVSPGS---- 120
           KLPWM+GRRCLQ+A   RKKRKL+ R+ ECDGA  A ET   +  E+GLPE+ PGS    
Sbjct: 61  KLPWMIGRRCLQRA---RKKRKLIRRKRECDGAAAASETALGLAREEGLPEIVPGSVEEE 120

Query: 121 GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 163
            EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Sbjct: 121 EEEEEGVGNFSARFEAERIWLQLYQLGQLGFGRVSFTGNSNQWPNSN 164

[Close]

BLAST of CSPI05G18420 vs. ExPASy TrEMBL
Match: A0A6J1JH40 (uncharacterized protein LOC111486958 OS=Cucurbita maxima OX=3661 GN=LOC111486958 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.1e-63
Identity = 132/172 (76.74%), Postives = 141/172 (81.98%), Query Frame = 0


Query: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 1   MEESPSPPTRRRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60

Query: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTA-ETGGCVGNEKGLPEVSPGS---- 120
           KLPWM+GRRCLQ+A   RKKRKL+ R+ ECDGA  A ETG     E+GLPE+ PGS    
Sbjct: 61  KLPWMIGRRCLQRA---RKKRKLIRRKRECDGAAAASETGLGPAREEGLPEIVPGSVEEE 120

Query: 121 -----GEEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 163
                 EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Sbjct: 121 EEEEEEEEEEGVGNFSARFEAERIWLQLYQLGQLGFGRVSFTGNSNQWPNSN 169

[Close]

BLAST of CSPI05G18420 vs. NCBI nr
Match: XP_011655414.1 (uncharacterized protein LOC105435525 [Cucumis sativus])

HSP 1 Score: 329.7 bits (844), Expect = 1.4e-86
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60

Query: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGGCVGNEKGLPEVSPGSGEEDE 120
           KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGAT AETGGCVGNEKGLPEVSPGSGEEDE
Sbjct: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATAAETGGCVGNEKGLPEVSPGSGEEDE 120

Query: 121 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 163
           TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Sbjct: 121 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 162

[Close]

BLAST of CSPI05G18420 vs. NCBI nr
Match: KGN51853.2 (hypothetical protein Csa_008870 [Cucumis sativus])

HSP 1 Score: 329.7 bits (844), Expect = 1.4e-86
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 456 MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 515

Query: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGGCVGNEKGLPEVSPGSGEEDE 120
           KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGAT AETGGCVGNEKGLPEVSPGSGEEDE
Sbjct: 516 KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATAAETGGCVGNEKGLPEVSPGSGEEDE 575

Query: 121 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 163
           TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Sbjct: 576 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 617

[Close]

BLAST of CSPI05G18420 vs. NCBI nr
Match: XP_008458773.1 (PREDICTED: uncharacterized protein LOC103498078 [Cucumis melo] >XP_008458774.1 PREDICTED: uncharacterized protein LOC103498078 [Cucumis melo] >KAA0037530.1 uncharacterized protein E6C27_scaffold277G001430 [Cucumis melo var. makuwa] >TYK02005.1 uncharacterized protein E5676_scaffold808G001190 [Cucumis melo var. makuwa])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           MQESPS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 1   MQESPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60

Query: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGGCVGNEKGLPEVSPGSGEEDE 120
           KLPWMVGRRCLQQARKKRKKRKLV RRGECDGAT AETGGCVGNEKGLPE+SPGSGEEDE
Sbjct: 61  KLPWMVGRRCLQQARKKRKKRKLVRRRGECDGATAAETGGCVGNEKGLPEISPGSGEEDE 120

Query: 121 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 163
           TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Sbjct: 121 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 162

[Close]

BLAST of CSPI05G18420 vs. NCBI nr
Match: XP_038891069.1 (uncharacterized protein LOC120080480 [Benincasa hispida])

HSP 1 Score: 308.1 bits (788), Expect = 4.4e-80
Identity = 148/162 (91.36%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           MQESPS+ TRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALAL+
Sbjct: 1   MQESPSRPTRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALI 60

Query: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGGCVGNEKGLPEVSPGSGEEDE 120
           KLPWMVGRRCLQ+ARKKRKKRKL+ RRGECDGAT AETGGC  +E+GLPE+SPGSGEE+E
Sbjct: 61  KLPWMVGRRCLQRARKKRKKRKLIRRRGECDGATAAETGGCAASEEGLPEISPGSGEEEE 120

Query: 121 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 163
           T GNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN
Sbjct: 121 TVGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 162

[Close]

BLAST of CSPI05G18420 vs. NCBI nr
Match: XP_023536558.1 (uncharacterized protein LOC111797691 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.8 bits (652), Expect = 2.6e-64
Identity = 132/166 (79.52%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 1   MQESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60
           M+ESPS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV
Sbjct: 1   MEESPSPPTRRRRFPVDDGVDLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALV 60

Query: 61  KLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTA-ETGGCVGNEKGLPEVSPGSG--- 120
           KLPWM+GRRCLQ+A   RKKRKL+ R+ ECDGA  A ETG     E+ LPE+ PGSG   
Sbjct: 61  KLPWMIGRRCLQRA---RKKRKLIRRKRECDGAAAASETGLGPAREEELPEIMPGSGEEE 120

Query: 121 EEDETTGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNSNLWPNSN 163
           EE+E  GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGNSN WPNSN
Sbjct: 121 EEEEEVGNFSARFEAERIWLQLYQLGQLGFGRVSFTGNSNQWPNSN 163

[Close]

BLAST of CSPI05G18420 vs. TAIR 10
Match: AT5G14690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-28
Identity = 76/195 (38.97%), Postives = 99/195 (50.77%), Query Frame = 0


Query: 3   ESPSQATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKL 62
           ++  +  RRRR       D + CS K CRS  A  +ADCVA+CCCPC++++ L L LVK+
Sbjct: 21  DAVDEENRRRRHNHHTHGDEVKCSSKRCRSWAAAAIADCVALCCCPCAIINLLTLTLVKV 80

Query: 63  PWMVGRRCLQQARKKRKKRKLV---CRRGECDGA-------------TTAET-------- 122
           PWM+GRRCL    + +KKR+++    RRG  +G               TAE         
Sbjct: 81  PWMIGRRCLGGGGRNKKKRRVIHRRKRRGNINGEDEFYHHNNHHRRFETAEEGEKCGCGG 140

Query: 123 --GGCVG------------------NEKGLPEVSPGSGEEDETTGNFSARFEAERIWLQL 154
             GGC G                   E+   E +     ED      SAR EAER+WL+L
Sbjct: 141 GGGGCYGGGDYDDHRFVVERDGSLTKEEEEEERTTSCKGEDHDESRISARVEAERVWLEL 200

[Close]

BLAST of CSPI05G18420 vs. TAIR 10
Match: AT3G01516.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14690.1); Has 67 Blast hits to 67 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 115.9 bits (289), Expect = 3.0e-26
Identity = 66/153 (43.14%), Postives = 85/153 (55.56%), Query Frame = 0


Query: 25  CSGKHCRSCTAGLVADCVAVCCCPCSVVSFLALALVKLPWMVGRRCLQQARKKRKKRKLV 84
           CSGK CRS  A  +ADCVA+CCCPC+VV+   LA VK+PWM+GR+C+ +    +K+ K +
Sbjct: 33  CSGKRCRSWAAAAIADCVALCCCPCAVVNIFTLAFVKVPWMIGRKCIGRGGPSKKRMKKI 92

Query: 85  CRRGECD------GATTAETGGCVGNEKG------------------LPEVSPGSGEEDE 144
            R            +    +GGC G   G                    E    S +E+E
Sbjct: 93  NREDRFHHHHHHRRSAEMVSGGCCGGGDGDGEFDDHRFVVERDGSLTKEEAKTASLKEEE 152

Query: 145 TTGNFSARFEAERIWLQLYQVGQLGFGRVSFTG 154
            T   SAR EAER+WL+LYQ+G LGFGRVSFTG
Sbjct: 153 ET-RISARVEAERVWLELYQIGHLGFGRVSFTG 184

[Close]

BLAST of CSPI05G18420 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 9.3e-04
Identity = 34/126 (26.98%), Postives = 56/126 (44.44%), Query Frame = 0


Query: 4   SPSQATRRR---RFAVDDGADLIDCSGKHCRSCTAGLVADCVAV-CCCPCSVVSFLALAL 63
           SPS++ RR+   + ++   +    C G        G  A C AV CCCPC +V+ L LA+
Sbjct: 25  SPSRSNRRQPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVNLLVLAI 84

Query: 64  VKLPWMVGRRCLQQARKKRKKRKLVCRRGECDGATTAETGGCVGNEKGLPEVSPGSGEED 123
            K+P  + RR ++  R+K+  +  +      DG           +E  +  +      +D
Sbjct: 85  YKVPKGICRRAIRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDSDDVSDD 144

Query: 124 ETTGNF 126
           E   NF
Sbjct: 145 EDDDNF 150

The following BLAST results are available for this feature:

BLAST of CSPI05G18420 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G18420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR58	6.8e-87	99.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G524770 PE=4 SV=1	[more]
A0A1S3C8M3	6.4e-85	97.53	uncharacterized protein LOC103498078 OS=Cucumis melo OX=3656 GN=LOC103498078 PE=...	[more]
A0A5A7T2E5	6.4e-85	97.53	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1HEE2	6.2e-64	78.44	uncharacterized protein LOC111463206 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]
A0A6J1JH40	1.1e-63	76.74	uncharacterized protein LOC111486958 OS=Cucurbita maxima OX=3661 GN=LOC111486958...	[more]

BLAST of CSPI05G18420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655414.1	1.4e-86	99.38	uncharacterized protein LOC105435525 [Cucumis sativus]	[more]
KGN51853.2	1.4e-86	99.38	hypothetical protein Csa_008870 [Cucumis sativus]	[more]
XP_008458773.1	1.3e-84	97.53	PREDICTED: uncharacterized protein LOC103498078 [Cucumis melo] >XP_008458774.1 P...	[more]
XP_038891069.1	4.4e-80	91.36	uncharacterized protein LOC120080480 [Benincasa hispida]	[more]
XP_023536558.1	2.6e-64	79.52	uncharacterized protein LOC111797691 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI05G18420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14690.1	2.4e-28	38.97	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G01516.1	3.0e-26	43.14	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G11690.1	9.3e-04	26.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33264	EXPRESSED PROTEIN	coord: 2..158
None	No IPR available	PANTHER	PTHR33264:SF6	OS01G0661650 PROTEIN	coord: 2..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G18420.1	CSPI05G18420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane