CSPI05G17830 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G17830
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontranscription initiation factor TFIID subunit 7
LocationChr5: 18991781 .. 18995443 (-)
RNA-Seq ExpressionCSPI05G17830
SyntenyCSPI05G17830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACTAAATCCCTAGAAATGGAAGGTCAGTTGCACTCCCACGAGGACAAAAAGAAATGATCGTTTTATTTTGCTGTAGTTTTTTAAAATGTTCCTTTCAATATTTAAAAGAAATTAGAATTTTATTTTCAAATTAAATTTTTAAAATTGGGTTTAAATAACTAATAAGATGGAGTTTTCCGGATCTTCTTCGTCTCACGAGTCTCCACTCCCTCCCCCGCGCAATCGGTATCCATATCCTTCCATCTCTTTCTCTTGCTCGTCGCTCGCCGCCGTCAATCATCAAAAGAAGGGAACAGTTTTACTCTCTCTTGTGCGAGGCCTGTTTCAAGTTCGAACCAAAGAATAGAAAACTTCATACAATAACTTTCCAGCATTCAAGGTAATTGGCAACCCAAGATTGTGTTTTCAAATTGAATGAATTGAACCAATTTTTGTTTCGAGACCCATTTGTGTGCAGATTTGATTATCCAAAATACACTATTTTTAGAATCTCATTTCTATGTTTTCAGCCTTTTGAAGTCTATATCCGAAAATTCAATCCGTGAGGCGTAGGTGTAGGTTTTTTCTGAGACCAGAAAGAAGCGTAGCTCGAGGGATAGAGGTTTTCTTCTTCTCATCGCATCGTGTATGGAGTTATTTTGCTAGATAATAGATAATTGATTTTGTTAAGTCCGAGTAACTGTTCGTTGGATAATGTTTCTTCCTGTAGAGTTTGGTTAGGGCCAGATTTTCTTTCATTATCCTCTTATTGTCCAACTTTTTGATTGTGGGAAATTTTGGTACATGATTGATACTGGGCCTTTATGAAATCTAATATTACACTTATGTCACCATGCACTATCTCCGTACTCATTGCGTTAAGGATTGTCATATCTATCGTAGTTCTAACGCGAAAATGATGACCATCGCCCTTGCATTAGGGCTACATGATCATCCCTAACACAACATAATACAGTATTGTGTTCTGGGGTAAGCAGTAAGTTAGATTTCATATGCGATGGTCATCAATCCTAATGTGGCCGGTGAAAGGGTCATCCATACAAAAAAAAAAAAAAAAAAAAAATCTTTGGTTGTGGGCTGTTGCTGATTGGATGTTTATCGGTTGGACCATTTACCGTGTTGTTTTTCCTTGGGAGTGATATTGGGTTATTTGTATTTGTTCCCCTCTTGCTAAGTTTACGTGTTGAAATTTTTGGGACTTTATAGTTAATGAAATTTGTTCCCCAAAGAAGTCTTTTAAAGGACAGCAATGTTTTCTTTCTTTGTCAAATGATAATTTTGTTTATCAATCTTTGAAAGAATGAAAATGCTTTTATGGCAATACTTGCGAGCCTGGTTCCATTTATGATGGTCGATCTTTTCTGTGCAGCAGTTTTGTTAATTTAGACTCTGAAGTTATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGATGATGCTTCGTTGGATTTGTCTTTCTCTGGTAGTAGAACTTATACAGTCATCTTTTGATTCATTCTGTACCTTCCGTGTTTTTTCCATTGCATCTGCGATGTATGGAAGAATTTTTAGATTTTCCGGATAGATTAGCTTCGTAGCCTCTTAAAAAAAAATAAAAGTAACTTCTGATACAAAGCCTTTTCTCTTTCTGTTATTTTTTTTACTCTGAACGTTCCCTTTTACTGATGATTGCCAATGTGTGCTTCTTAGGCCAAGTTTTGCACATAGTTGATCTCACTTTTGCCATGTGCTTGTCTGGCTAAGTTTAGTTATGGTGTATGGAAATCCAACACTTAAAATAGCCAAATCTTTGTTTCCTATTGTACTTAATGGAAAAGAAATTTGGCAGTAATATCAGGAGGTAGAGAGAGATTTGGAAATAGATCAAATTGTGCAGTATGGTTTTGTTCTAATTTGAGGCTTGGTTTAAATGCCTATAATATGGCCTCTTACATTGCATCCAGAGGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTCGTGGAATCCTACAAAACATATGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGGTAAAATGATATTAAAATCATTGGCACATGGATTTCAAAAGAGCACTCCGTTTCCTATGTTTTATGAGTTGATGTTTTTTCAATAGATGATTATGGTTAGAGAACCGAGTGATCCTGCTCCAGATTCTACCGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCACGAAAGCGTAGATTTCGAAGAGAGCCAGATTTAAATGTATGGTGTTCTAATCCCTCTTACTAAAAGTTTCATGTAGGATTTTCTTATGAGTAAGTAAATTGCTGTACAACATCATAATAAATTGAGATTTCTACTAATGTAATGAGCAGGTAGTCCGGGATAAATTATTGAATGATGCAAGTACAATATAGTTACCTAGTTTGTGCTTTACATGTTTTTCTCATTTATAAACCTTTGATTAACATTGATCTCTTATTTTTTTGGGTCAATAGTGACATGCTAAGCTCCCTTGTCTTTTCCCCATCTTTTCAATAATAATCAGTCTACATTTGCATTTGTTCTTCATATCAAAATTTGTTGCATCTAGAATGGTGTCTTTTGATTCTAGTCTCAAGGTTGTTAAATCATGAAATGTAACACGCATCAAAATGGAATTTTAGTTTATTGTGTATTAATTTCTAAAAAAACAGAAGTCAGAAAACAAATGGATTCTAAACAGTCCCTAAATGATTCTGTTTTCTTTCTTTTTTGGCAGCCTGAGCTTGTACGGCGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCCGATATCCTTCATATGTTATGGTTATGCTTTTCAGTTTCATTTGTGTTTTAAACTCATTAGCATATTAGTTGATGAAACAAATGTGTCATCCCCACCTCAAGCCACATCGTAAAGATTGTTTAAAGTCCAGTAAATATAATGGATTGAGAATTATTTTAATTGGTCCTCACATGAAATTCTTTGATTGAAAAATTGAAAAAACATACGGGAAACAGGAAATGACAATTGTTTTGTTGAGGGCGATTATTTTCTAACACAAAGGGCCTTTTTGCTTGTCATATTCTGACATATGTTATATGTTCTTATGCTGCAACGTAACTTTAGAAGTTCCTTGACTGAGCATTCTCACATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGAGAATCCTGATCATACAAATGCAAAGCCTGCTTCCGCACCTGCACCTAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGTGAGCCTGAAAGGAGCGATTCTGATGACTCTGATCGTTCAATTGATTGAATATTATCATCATCTACTTCTAAATGTTTGTCTCCCTAATGATGGAGGTTGTATCAGCCTGTTTGTATATGAAAGGAAATGGTAACTGTTGTCTGTATCATCCCTTCTCTTGCATCTAGAAACAAAACACAGGATGATTTCTTTGGTGTATTTTAACATCTTTCATTTCTATAACAAGATATCTTCTTGAATTTCTGAGGAAGAGATGACCATTTATTTAGCATAATGCAAATGAAGATTACAT

mRNA sequence

CAACTAAATCCCTAGAAATGGAAGGTCAGTTGCACTCCCACGAGGACAAAAAGAAATGATCGTTTTATTTTGCTGTAGTTTTTTAAAATGTTCCTTTCAATATTTAAAAGAAATTAGAATTTTATTTTCAAATTAAATTTTTAAAATTGGGTTTAAATAACTAATAAGATGGAGTTTTCCGGATCTTCTTCGTCTCACGAGTCTCCACTCCCTCCCCCGCGCAATCGGTATCCATATCCTTCCATCTCTTTCTCTTGCTCGTCGCTCGCCGCCGTCAATCATCAAAAGAAGGGAACAGTTTTACTCTCTCTTGTGCGAGGCCTGTTTCAAGTTCGAACCAAAGAATAGAAAACTTCATACAATAACTTTCCAGCATTCAAGCCTTTTGAAGTCTATATCCGAAAATTCAATCCGTGAGGCGTAGGTGTAGGTTTTTTCTGAGACCAGAAAGAAGCGTAGCTCGAGGGATAGAGTTTTGTTAATTTAGACTCTGAAGTTATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGATGATGCTTCGTTGGATTTGTCTTTCTCTGAGGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTCGTGGAATCCTACAAAACATATGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGATGATTATGGTTAGAGAACCGAGTGATCCTGCTCCAGATTCTACCGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCACGAAAGCGTAGATTTCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGGCGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCCGATATCCTTCATATGTTATGGTTATGCTTTTCAGTTTCATTTGTGTTTTAAACTCATTAGCATATTAGTTGATGAAACAAATGTGTCATCCCCACCTCAAGCCACATCGTAAAGATTGTTTAAAGTCCAGTAAATATAATGGATTGAGAATTATTTTAATTGGTCCTCACATGAAATTCTTTGATTGAAAAATTGAAAAAACATACGGGAAACAGGAAATGACAATTGTTTTGTTGAGGGCGATTATTTTCTAACACAAAGGGCCTTTTTGCTTGTCATATTCTGACATATGTTATATGTTCTTATGCTGCAACGTAACTTTAGAAGTTCCTTGACTGAGCATTCTCACATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGAGAATCCTGATCATACAAATGCAAAGCCTGCTTCCGCACCTGCACCTAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGTGAGCCTGAAAGGAGCGATTCTGATGACTCTGATCGTTCAATTGATTGAATATTATCATCATCTACTTCTAAATGTTTGTCTCCCTAATGATGGAGGTTGTATCAGCCTGTTTGTATATGAAAGGAAATGGTAACTGTTGTCTGTATCATCCCTTCTCTTGCATCTAGAAACAAAACACAGGATGATTTCTTTGGTGTATTTTAACATCTTTCATTTCTATAACAAGATATCTTCTTGAATTTCTGAGGAAGAGATGACCATTTATTTAGCATAATGCAAATGAAGATTACAT

Coding sequence (CDS)

ATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGATGATGCTTCGTTGGATTTGTCTTTCTCTGAGGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTCGTGGAATCCTACAAAACATATGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGATGATTATGGTTAGAGAACCGAGTGATCCTGCTCCAGATTCTACCGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCACGAAAGCGTAGATTTCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGGCGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCCGATATCCTTCATATGTTATGGTTATGCTTTTCAGTTTCATTTGTGTTTTAA

Protein sequence

MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENADILHMLWLCFSVSFVF*
Homology
[Close]
BLAST of CSPI05G17830 vs. ExPASy Swiss-Prot
Match: B9DG24 (Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.9e-62
Identity = 119/164 (72.56%), Postives = 139/164 (84.76%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E+AS+SD+  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREP DPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENAD----ILHMLWLCFSVSF 161
           DLNPELV+RVE+DLLNI++GGT EN        HM+ L   + F
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVENVSFSFYFRHMMCLYLLLGF 164

[Close]
BLAST of CSPI05G17830 vs. ExPASy Swiss-Prot
Match: Q9D3R9 (Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN=Taf7l PE=1 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 7.4e-14
Identity = 47/155 (30.32%), Postives = 80/155 (51.61%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +EEQF+LR+PP  A  + ++++   ++  D  L + FS DG      + +   PA L++L
Sbjct: 106 VEEQFILRLPPEQAYAVRKIIHSRNAAWKD-KLKIDFSPDGHHAVVQVDNVSLPAKLVNL 165

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVR---EPSDPAPDST------------------- 120
           PCV+ S KT D     K AD+ QM++     EP  P  +                     
Sbjct: 166 PCVIGSLKTIDRKTFYKTADVSQMLVCSPEGEPHSPPEEPVVSTGPTVIGISEGKAERKK 225

Query: 121 -EYRHGLTPPMRDARKRRFRREPDLNPELVRRVEK 133
             ++HG+TPP+++ RK+RFR+     P+ V++V++
Sbjct: 226 YNWKHGITPPLKNVRKKRFRKTTKKLPD-VKQVDE 258

[Close]
BLAST of CSPI05G17830 vs. ExPASy Swiss-Prot
Match: Q6R1L1 (Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.8e-13
Identity = 54/163 (33.13%), Postives = 78/163 (47.85%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     +  D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIM----------VREPSDPA-PDSTE---------- 120
           PCV+ES KT D     K ADI QM++          V EP  PA P +++          
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVAPADPKASKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]
BLAST of CSPI05G17830 vs. ExPASy Swiss-Prot
Match: Q9R1C0 (Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 8.2e-13
Identity = 51/163 (31.29%), Postives = 71/163 (43.56%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     +  D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYAATVRRAVQSGHVNLKD-KLSIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTE--------------------- 120
           PCV ES KT D     K ADI QM++     D  P   E                     
Sbjct: 72  PCVTESLKTIDKKTFYKTADISQMLVATVDGDLYPPVEEAAATADPKANKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]
BLAST of CSPI05G17830 vs. ExPASy Swiss-Prot
Match: Q15545 (Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-12
Identity = 52/163 (31.90%), Postives = 76/163 (46.63%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     +  D  L +    DGR G   +      + L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLASKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIM----------VREP---SDPAPDSTE-------- 120
           PCV+ES KT D     K ADI QM++          V EP   +DP     +        
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVASTDPKASKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRR--------EPDLNPELVRRVEKD 134
            + HG+T P+++ RKRRFR+         PD+  E+ R +  D
Sbjct: 132 IWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTD 173

[Close]
BLAST of CSPI05G17830 vs. ExPASy TrEMBL
Match: A0A0A0KSB3 (TAFII55_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 146/148 (98.65%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 96  MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 155

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 156 PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 215

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADI 149
           DLNPELVRRVEKDLLNIMAGGTTENAD+
Sbjct: 216 DLNPELVRRVEKDLLNIMAGGTTENADV 243

[Close]
BLAST of CSPI05G17830 vs. ExPASy TrEMBL
Match: A0A1S3C8V9 (transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC103498146 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 6.0e-75
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+DASLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADI 149
           DLNPELVRRVEKDLLNIMAGGTTENAD+
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV 148

[Close]
BLAST of CSPI05G17830 vs. ExPASy TrEMBL
Match: A0A6J1JR83 (transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADI 149
           DLNPELVRRVEKDLLNIMAGGTTENAD+
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV 148

[Close]
BLAST of CSPI05G17830 vs. ExPASy TrEMBL
Match: A0A6J1JHS5 (transcription initiation factor TFIID subunit 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 85  MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 144

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 145 PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 204

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADI 149
           DLNPELVRRVEKDLLNIMAGGTTENAD+
Sbjct: 205 DLNPELVRRVEKDLLNIMAGGTTENADV 232

[Close]
BLAST of CSPI05G17830 vs. ExPASy TrEMBL
Match: A0A6J1JSC8 (transcription initiation factor TFIID subunit 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 84  MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 143

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 144 PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 203

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADI 149
           DLNPELVRRVEKDLLNIMAGGTTENAD+
Sbjct: 204 DLNPELVRRVEKDLLNIMAGGTTENADV 231

[Close]
BLAST of CSPI05G17830 vs. NCBI nr
Match: XP_004142764.1 (transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655371.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655372.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655373.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >KAE8648545.1 hypothetical protein Csa_008553 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 3.3e-75
Identity = 146/148 (98.65%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADI 149
           DLNPELVRRVEKDLLNIMAGGTTENAD+
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV 148

[Close]
BLAST of CSPI05G17830 vs. NCBI nr
Match: XP_008458871.1 (PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_008458872.1 PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+DASLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADI 149
           DLNPELVRRVEKDLLNIMAGGTTENAD+
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV 148

[Close]
BLAST of CSPI05G17830 vs. NCBI nr
Match: KAG6602385.1 (Expansin-A6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 270 MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 329

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 330 PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 389

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADI 149
           DLNPELVRRVEKDLLNIMAGGTTENAD+
Sbjct: 390 DLNPELVRRVEKDLLNIMAGGTTENADV 417

[Close]
BLAST of CSPI05G17830 vs. NCBI nr
Match: XP_022990129.1 (transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima] >XP_022990130.1 transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima])

HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADI 149
           DLNPELVRRVEKDLLNIMAGGTTENAD+
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV 148

[Close]
BLAST of CSPI05G17830 vs. NCBI nr
Match: XP_023516679.1 (transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516685.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516692.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516700.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+D SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADI 149
           DLNPELVRRVEKDLLNIMAGGTTENAD+
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV 148

[Close]
BLAST of CSPI05G17830 vs. TAIR 10
Match: AT1G55300.2 (TBP-associated factor 7 )

HSP 1 Score: 240.0 bits (611), Expect = 1.4e-63
Identity = 119/164 (72.56%), Postives = 139/164 (84.76%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E+AS+SD+  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREP DPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENAD----ILHMLWLCFSVSF 161
           DLNPELV+RVE+DLLNI++GGT EN        HM+ L   + F
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVENVSFSFYFRHMMCLYLLLGF 164

[Close]
BLAST of CSPI05G17830 vs. TAIR 10
Match: AT1G55300.1 (TBP-associated factor 7 )

HSP 1 Score: 239.2 bits (609), Expect = 2.3e-63
Identity = 115/145 (79.31%), Postives = 133/145 (91.72%), Query Frame = 0 

Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E+AS+SD+  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREP DPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTEN 146
           DLNPELV+RVE+DLLNI++GGT EN
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVEN 145

The following BLAST results are available for this feature:
BLAST of CSPI05G17830 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B9DG241.9e-6272.56Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9D3R97.4e-1430.32Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN... [more]
Q6R1L14.8e-1333.13Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 G... [more]
Q9R1C08.2e-1331.29Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7... [more]
Q155453.1e-1231.90Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 ... [more]
BLAST of CSPI05G17830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSB31.6e-7598.65TAFII55_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 P... [more]
A0A1S3C8V96.0e-7597.97transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1JR831.1e-7396.62transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima O... [more]
A0A6J1JHS51.1e-7396.62transcription initiation factor TFIID subunit 7 isoform X1 OS=Cucurbita maxima O... [more]
A0A6J1JSC81.1e-7396.62transcription initiation factor TFIID subunit 7 isoform X2 OS=Cucurbita maxima O... [more]
BLAST of CSPI05G17830 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142764.13.3e-7598.65transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655371.... [more]
XP_008458871.11.2e-7497.97PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_00... [more]
KAG6602385.12.3e-7396.62Expansin-A6, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022990129.12.3e-7396.62transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima] >X... [more]
XP_023516679.12.3e-7396.62transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP... [more]
BLAST of CSPI05G17830 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G55300.21.4e-6372.56TBP-associated factor 7 [more]
AT1G55300.12.3e-6379.31TBP-associated factor 7 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006751TAFII55 protein, conserved regionSMARTSM01370TAFII55_N_2coord: 1..145
e-value: 1.1E-59
score: 214.2
IPR006751TAFII55 protein, conserved regionPFAMPF04658TAFII55_Ncoord: 1..135
e-value: 1.5E-32
score: 112.5
IPR006751TAFII55 protein, conserved regionCDDcd08047TAF7coord: 2..147
e-value: 5.67229E-43
score: 139.711
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..201
IPR037817Transcription initiation factor TFIID subunit 7PANTHERPTHR12228TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATEDcoord: 1..183

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G17830.1CSPI05G17830.1mRNA
CSPI05G17830.2CSPI05G17830.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0051123 RNA polymerase II preinitiation complex assembly
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
biological_process GO:0006413 translational initiation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005669 transcription factor TFIID complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0016251 RNA polymerase II general transcription initiation factor activity
molecular_function GO:0003743 translation initiation factor activity