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CSPI05G17830 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACTAAATCCCTAGAAATGGAAGGTCAGTTGCACTCCCACGAGGACAAAAAGAAATGATCGTTTTATTTTGCTGTAGTTTTTTAAAATGTTCCTTTCAATATTTAAAAGAAATTAGAATTTTATTTTCAAATTAAATTTTTAAAATTGGGTTTAAATAACTAATAAGATGGAGTTTTCCGGATCTTCTTCGTCTCACGAGTCTCCACTCCCTCCCCCGCGCAATCGGTATCCATATCCTTCCATCTCTTTCTCTTGCTCGTCGCTCGCCGCCGTCAATCATCAAAAGAAGGGAACAGTTTTACTCTCTCTTGTGCGAGGCCTGTTTCAAGTTCGAACCAAAGAATAGAAAACTTCATACAATAACTTTCCAGCATTCAAGGTAATTGGCAACCCAAGATTGTGTTTTCAAATTGAATGAATTGAACCAATTTTTGTTTCGAGACCCATTTGTGTGCAGATTTGATTATCCAAAATACACTATTTTTAGAATCTCATTTCTATGTTTTCAGCCTTTTGAAGTCTATATCCGAAAATTCAATCCGTGAGGCGTAGGTGTAGGTTTTTTCTGAGACCAGAAAGAAGCGTAGCTCGAGGGATAGAGGTTTTCTTCTTCTCATCGCATCGTGTATGGAGTTATTTTGCTAGATAATAGATAATTGATTTTGTTAAGTCCGAGTAACTGTTCGTTGGATAATGTTTCTTCCTGTAGAGTTTGGTTAGGGCCAGATTTTCTTTCATTATCCTCTTATTGTCCAACTTTTTGATTGTGGGAAATTTTGGTACATGATTGATACTGGGCCTTTATGAAATCTAATATTACACTTATGTCACCATGCACTATCTCCGTACTCATTGCGTTAAGGATTGTCATATCTATCGTAGTTCTAACGCGAAAATGATGACCATCGCCCTTGCATTAGGGCTACATGATCATCCCTAACACAACATAATACAGTATTGTGTTCTGGGGTAAGCAGTAAGTTAGATTTCATATGCGATGGTCATCAATCCTAATGTGGCCGGTGAAAGGGTCATCCATACAAAAAAAAAAAAAAAAAAAAAATCTTTGGTTGTGGGCTGTTGCTGATTGGATGTTTATCGGTTGGACCATTTACCGTGTTGTTTTTCCTTGGGAGTGATATTGGGTTATTTGTATTTGTTCCCCTCTTGCTAAGTTTACGTGTTGAAATTTTTGGGACTTTATAGTTAATGAAATTTGTTCCCCAAAGAAGTCTTTTAAAGGACAGCAATGTTTTCTTTCTTTGTCAAATGATAATTTTGTTTATCAATCTTTGAAAGAATGAAAATGCTTTTATGGCAATACTTGCGAGCCTGGTTCCATTTATGATGGTCGATCTTTTCTGTGCAGCAGTTTTGTTAATTTAGACTCTGAAGTTATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGATGATGCTTCGTTGGATTTGTCTTTCTCTGGTAGTAGAACTTATACAGTCATCTTTTGATTCATTCTGTACCTTCCGTGTTTTTTCCATTGCATCTGCGATGTATGGAAGAATTTTTAGATTTTCCGGATAGATTAGCTTCGTAGCCTCTTAAAAAAAAATAAAAGTAACTTCTGATACAAAGCCTTTTCTCTTTCTGTTATTTTTTTTACTCTGAACGTTCCCTTTTACTGATGATTGCCAATGTGTGCTTCTTAGGCCAAGTTTTGCACATAGTTGATCTCACTTTTGCCATGTGCTTGTCTGGCTAAGTTTAGTTATGGTGTATGGAAATCCAACACTTAAAATAGCCAAATCTTTGTTTCCTATTGTACTTAATGGAAAAGAAATTTGGCAGTAATATCAGGAGGTAGAGAGAGATTTGGAAATAGATCAAATTGTGCAGTATGGTTTTGTTCTAATTTGAGGCTTGGTTTAAATGCCTATAATATGGCCTCTTACATTGCATCCAGAGGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTCGTGGAATCCTACAAAACATATGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGGTAAAATGATATTAAAATCATTGGCACATGGATTTCAAAAGAGCACTCCGTTTCCTATGTTTTATGAGTTGATGTTTTTTCAATAGATGATTATGGTTAGAGAACCGAGTGATCCTGCTCCAGATTCTACCGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCACGAAAGCGTAGATTTCGAAGAGAGCCAGATTTAAATGTATGGTGTTCTAATCCCTCTTACTAAAAGTTTCATGTAGGATTTTCTTATGAGTAAGTAAATTGCTGTACAACATCATAATAAATTGAGATTTCTACTAATGTAATGAGCAGGTAGTCCGGGATAAATTATTGAATGATGCAAGTACAATATAGTTACCTAGTTTGTGCTTTACATGTTTTTCTCATTTATAAACCTTTGATTAACATTGATCTCTTATTTTTTTGGGTCAATAGTGACATGCTAAGCTCCCTTGTCTTTTCCCCATCTTTTCAATAATAATCAGTCTACATTTGCATTTGTTCTTCATATCAAAATTTGTTGCATCTAGAATGGTGTCTTTTGATTCTAGTCTCAAGGTTGTTAAATCATGAAATGTAACACGCATCAAAATGGAATTTTAGTTTATTGTGTATTAATTTCTAAAAAAACAGAAGTCAGAAAACAAATGGATTCTAAACAGTCCCTAAATGATTCTGTTTTCTTTCTTTTTTGGCAGCCTGAGCTTGTACGGCGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCCGATATCCTTCATATGTTATGGTTATGCTTTTCAGTTTCATTTGTGTTTTAAACTCATTAGCATATTAGTTGATGAAACAAATGTGTCATCCCCACCTCAAGCCACATCGTAAAGATTGTTTAAAGTCCAGTAAATATAATGGATTGAGAATTATTTTAATTGGTCCTCACATGAAATTCTTTGATTGAAAAATTGAAAAAACATACGGGAAACAGGAAATGACAATTGTTTTGTTGAGGGCGATTATTTTCTAACACAAAGGGCCTTTTTGCTTGTCATATTCTGACATATGTTATATGTTCTTATGCTGCAACGTAACTTTAGAAGTTCCTTGACTGAGCATTCTCACATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGAGAATCCTGATCATACAAATGCAAAGCCTGCTTCCGCACCTGCACCTAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGTGAGCCTGAAAGGAGCGATTCTGATGACTCTGATCGTTCAATTGATTGAATATTATCATCATCTACTTCTAAATGTTTGTCTCCCTAATGATGGAGGTTGTATCAGCCTGTTTGTATATGAAAGGAAATGGTAACTGTTGTCTGTATCATCCCTTCTCTTGCATCTAGAAACAAAACACAGGATGATTTCTTTGGTGTATTTTAACATCTTTCATTTCTATAACAAGATATCTTCTTGAATTTCTGAGGAAGAGATGACCATTTATTTAGCATAATGCAAATGAAGATTACAT CAACTAAATCCCTAGAAATGGAAGGTCAGTTGCACTCCCACGAGGACAAAAAGAAATGATCGTTTTATTTTGCTGTAGTTTTTTAAAATGTTCCTTTCAATATTTAAAAGAAATTAGAATTTTATTTTCAAATTAAATTTTTAAAATTGGGTTTAAATAACTAATAAGATGGAGTTTTCCGGATCTTCTTCGTCTCACGAGTCTCCACTCCCTCCCCCGCGCAATCGGTATCCATATCCTTCCATCTCTTTCTCTTGCTCGTCGCTCGCCGCCGTCAATCATCAAAAGAAGGGAACAGTTTTACTCTCTCTTGTGCGAGGCCTGTTTCAAGTTCGAACCAAAGAATAGAAAACTTCATACAATAACTTTCCAGCATTCAAGCCTTTTGAAGTCTATATCCGAAAATTCAATCCGTGAGGCGTAGGTGTAGGTTTTTTCTGAGACCAGAAAGAAGCGTAGCTCGAGGGATAGAGTTTTGTTAATTTAGACTCTGAAGTTATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGATGATGCTTCGTTGGATTTGTCTTTCTCTGAGGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTCGTGGAATCCTACAAAACATATGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGATGATTATGGTTAGAGAACCGAGTGATCCTGCTCCAGATTCTACCGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCACGAAAGCGTAGATTTCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGGCGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCCGATATCCTTCATATGTTATGGTTATGCTTTTCAGTTTCATTTGTGTTTTAAACTCATTAGCATATTAGTTGATGAAACAAATGTGTCATCCCCACCTCAAGCCACATCGTAAAGATTGTTTAAAGTCCAGTAAATATAATGGATTGAGAATTATTTTAATTGGTCCTCACATGAAATTCTTTGATTGAAAAATTGAAAAAACATACGGGAAACAGGAAATGACAATTGTTTTGTTGAGGGCGATTATTTTCTAACACAAAGGGCCTTTTTGCTTGTCATATTCTGACATATGTTATATGTTCTTATGCTGCAACGTAACTTTAGAAGTTCCTTGACTGAGCATTCTCACATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGAGAATCCTGATCATACAAATGCAAAGCCTGCTTCCGCACCTGCACCTAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGTGAGCCTGAAAGGAGCGATTCTGATGACTCTGATCGTTCAATTGATTGAATATTATCATCATCTACTTCTAAATGTTTGTCTCCCTAATGATGGAGGTTGTATCAGCCTGTTTGTATATGAAAGGAAATGGTAACTGTTGTCTGTATCATCCCTTCTCTTGCATCTAGAAACAAAACACAGGATGATTTCTTTGGTGTATTTTAACATCTTTCATTTCTATAACAAGATATCTTCTTGAATTTCTGAGGAAGAGATGACCATTTATTTAGCATAATGCAAATGAAGATTACAT ATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGATGATGCTTCGTTGGATTTGTCTTTCTCTGAGGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTCGTGGAATCCTACAAAACATATGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGATGATTATGGTTAGAGAACCGAGTGATCCTGCTCCAGATTCTACCGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCACGAAAGCGTAGATTTCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGGCGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCCGATATCCTTCATATGTTATGGTTATGCTTTTCAGTTTCATTTGTGTTTTAA MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENADILHMLWLCFSVSFVF* Homology
BLAST of CSPI05G17830 vs. ExPASy Swiss-Prot
Match: B9DG24 (Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 GN=TAF7 PE=1 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 1.9e-62 Identity = 119/164 (72.56%), Postives = 139/164 (84.76%), Query Frame = 0
BLAST of CSPI05G17830 vs. ExPASy Swiss-Prot
Match: Q9D3R9 (Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN=Taf7l PE=1 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 7.4e-14 Identity = 47/155 (30.32%), Postives = 80/155 (51.61%), Query Frame = 0
BLAST of CSPI05G17830 vs. ExPASy Swiss-Prot
Match: Q6R1L1 (Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 GN=TAF7 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.8e-13 Identity = 54/163 (33.13%), Postives = 78/163 (47.85%), Query Frame = 0
BLAST of CSPI05G17830 vs. ExPASy Swiss-Prot
Match: Q9R1C0 (Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 8.2e-13 Identity = 51/163 (31.29%), Postives = 71/163 (43.56%), Query Frame = 0
BLAST of CSPI05G17830 vs. ExPASy Swiss-Prot
Match: Q15545 (Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.1e-12 Identity = 52/163 (31.90%), Postives = 76/163 (46.63%), Query Frame = 0
BLAST of CSPI05G17830 vs. ExPASy TrEMBL
Match: A0A0A0KSB3 (TAFII55_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75 Identity = 146/148 (98.65%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CSPI05G17830 vs. ExPASy TrEMBL
Match: A0A1S3C8V9 (transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC103498146 PE=3 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 6.0e-75 Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of CSPI05G17830 vs. ExPASy TrEMBL
Match: A0A6J1JR83 (transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73 Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of CSPI05G17830 vs. ExPASy TrEMBL
Match: A0A6J1JHS5 (transcription initiation factor TFIID subunit 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73 Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of CSPI05G17830 vs. ExPASy TrEMBL
Match: A0A6J1JSC8 (transcription initiation factor TFIID subunit 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73 Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of CSPI05G17830 vs. NCBI nr
Match: XP_004142764.1 (transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655371.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655372.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655373.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >KAE8648545.1 hypothetical protein Csa_008553 [Cucumis sativus]) HSP 1 Score: 292.0 bits (746), Expect = 3.3e-75 Identity = 146/148 (98.65%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CSPI05G17830 vs. NCBI nr
Match: XP_008458871.1 (PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_008458872.1 PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo]) HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74 Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of CSPI05G17830 vs. NCBI nr
Match: KAG6602385.1 (Expansin-A6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73 Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of CSPI05G17830 vs. NCBI nr
Match: XP_022990129.1 (transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima] >XP_022990130.1 transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima]) HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73 Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of CSPI05G17830 vs. NCBI nr
Match: XP_023516679.1 (transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516685.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516692.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516700.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73 Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of CSPI05G17830 vs. TAIR 10
Match: AT1G55300.2 (TBP-associated factor 7 ) HSP 1 Score: 240.0 bits (611), Expect = 1.4e-63 Identity = 119/164 (72.56%), Postives = 139/164 (84.76%), Query Frame = 0
BLAST of CSPI05G17830 vs. TAIR 10
Match: AT1G55300.1 (TBP-associated factor 7 ) HSP 1 Score: 239.2 bits (609), Expect = 2.3e-63 Identity = 115/145 (79.31%), Postives = 133/145 (91.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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