CSPI05G16950 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G16950
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LOB domain-containing protein
Location	Chr5: 18274069 .. 18277955 (+)
RNA-Seq Expression	CSPI05G16950
Synteny	CSPI05G16950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATCGTCGTCGCCACCACCGTGTACGGTGGTTCTCAGCCCTTGCGCCGCTTGTAAGATCCTCCGTCGGCGATGTGTCGATAAGTGTATTTTAGCACCATATTTTCCTCCGACTGACCCTTTCAAGTTCGCCGCCGTCCACAGAATATACGGAGCCGGCAACGTCATCAAGTTCTTGCAGGTAAACACCTACGTCTAAAATCAATTTAGAATACAATTTTATTTATTCATGTTTTTTCTCTCTTGAACTTAGAGGAATGTTGCAACGTCTTCGATATTTTCTGTTTATCTTTTTTAAGTTAGTGTTAGAATCAACAATAAACAAAGAAAGAAAGAAAAATATTGCAACACTACATGATACAAGTTGATGAAGAATTTTTTTTTTGGGCATCTCTCAACGGCCCATATTTTAAATGTTAGTTCATAGTTTTTGTGATCAAGCAATAAATTCTCTATATTTTTCTTAAATTTTTCTAAAATTGTCTTTCTACTATGATCTAGTTAGAGTACTGTTATAATATATGAGTGCAACGTAAGATGTTCTCAAGTATTACAATAATTAAAACACGGTCATAATTGATATATGATCGATCAAAAGACATATATACGAGAAAGAAAACATTTACAAACTTGGAAAAATCTACTATGTAACGTATTTTTGTAAAAGAAAATTTGATTTTTTTTCTCATGTTAAAAACAACATCGTCATTGCTCTACAAAATAAAAAAGAAGAGCATACTAATTATGTAAAAAAGTAATACTACGAATAATTATATAGGAATTGCCAGAGGGTCAGAGAGCGGACGCTGCAAGTAGTTTGGTATACGAAGCGAATGCGAGAATTCGAGACCCAATCTATGGGTGCACCGGTTCAATATTTCAACTTCAAAATAAAGTGAGGGAGCTGCATGCACAATTAGCTGTGGCAAAGGCTGAGGTTCATAAGATGCAGCAACTTCAACATCCAAATTTGTTAGCCCTACCAAGAAGTCAATTTCAAGAACAACAAAACTATTGCATCTTCACCCAACTACAAAACTTTCCTTTTCCTGATTTTACCTCTCATCTTCCACATCTATAACAACAAATCTTCCCACATTGTTTCCGATATTCTTCATGCTCTTCCTAATCATCTTCTCTCTCTTTCCATATTCATATAAAACATCGATAAGCAAGTTTTATGTCGGTTGAGTCTACGCTCATGTTGTCAATAAAGTTTGAGTTTTTCTGTTGTTTGCTACTTTTTTTTTAATTGGGTTAAAAATACTATTTTGATCTTTTATTAATACAAATGGAAGGTATTGTATTTGAGTTTAAGACCTCTTAATACCCTCAAATGCATACAAATGTGTAAGTTGAATCAAGTTTTCATTAGCATCATTTTGATTTTTTTACTTTAGAGTGCTTGTTCAATTTTAATCCACCGAGCATTTAATTTTTTTCTCGTGTTATTTTCATGCATTCTTATTAATGATATACATACCCCTTGGACAATTATAACAATACAGATTTTTACATAACAAACCATTCTTTCACCATATATTTCATAAATATATTTGGTTAATTTTCATAAATCTAATAAAACACAACAAAATTTACAATTCATGTAACAAAAAGCAAAAGTTTACTATATATAATAATTTGTATTCGTTTTAAGGGACTGATCGACATGGCAGCAATAAGCTCAGCTCAAAGCAACATGATTCTTACATGAAAAGTGAGAAAATATTTTGAAAGAATGAGCTTAAAATGTCTAGTGAGTGATATTTTCAAAATATAATTTCCAAATAGTTATGTTCGATGATTTTGGCTTCAAACTTAAGTACAGTAAATCATTTAGAAACATTTTATAATATTCTTCAACCATCCATAACATTTAAGAAGATTCACTAGAAAAATGGACCTTTTGTACGCTTGTAATTTTAGTTACTTACGTTTTTTGGAAGAAAAAAAGTCAAAAAAGTACGTGATTGCAAATATAAAACGTCAAAGAATTTTTATGAAAATGTGGAGGCGGGTTTTTTATAAATGTAAGTAACATATTTTTTTGTTGATATTTCAGAAAATGTGGAGAATTTTTATGAAAAGAAGGTCAAGTTACTTTTACTCAAATGAGAAGTAATATCTATTCAATTGGTTTCGGATTTGAATATAGGAAAATATAAATGATATTTTAATATTAAAAAGTTAGGTCTCCAAATTTTCTCCCTCCCTCGACAATCGCGTCTCGGTTCGCCGTCTAGCCATCTGATCGCTCGGCTTCCTCTAAATCGGCGTCTCCATTTCTCTTGGTTCCTCTCAATCACCGTCTCCATCTCTCTCGGCTTCCTCTCAATCTCCGCTGATTTCGTTTCCGACTCTCTCCCTGCCGCCGTCTCCGACTCTCTCCTTATTCTCTCACTCCAGTAATTTCTCCACCCACTAGAAGAGCTCTCTCTGTCTCTGCAATTTCTCCACCCACCTTCCAAATCCGCCGCATCGAATTTCTTCGACCTCCCGGACTCGGCCGGCGTCAAGGCGGTGGAGTTTCGAATTGGATTGGGTGAAACCCACCTTGACGGAGACCAGGTAATTTCATTTCAAAATCCAATTTAGGGGATGAAAGAATATAATAATGTGATTGTTTGACTATATGATTTGATTTGAACTGAGTGAAGTCCTAACTAAACATAGATTTTATGTATTATAGTAAGAATTAATTTGGTTTTTCTTGTTGTAATACAAACTAGAATGCACTCTGCATCCCTTCTTCTAGTTTGAAATGTGTTTTTGATTTGTTGGAAAAATAAGATGTCGTGAGCACCTTAGAAGAAGATGGATTTTGACCCAACTTTTTGAGAATTGGGAGCATACAAAGAAGAGCCCCCCCACCCCCCCTCAAATGGTGCCTTCCAACTTTTTATAGAATAATAATCAATACATAACATTCTACCGTATTTGTTTTACAATTTCATTGAGATTGAGATGGGATTGTTTTAAATTAATCTTACTGTATACTTTTTTTTCCTTTCTTTGATTCCTTTTCAAATAAAAGTTATCCTTTGCAACAAACTACCACACAATCTCTAAGAAAACAAAATTACACAAACTGAAAAAATTGGATTATCAAAGTAGGAGATTACAGAGAATTCAATACATAGAGAGGGGAAAGTAACTTAAAAAGAAGAACTAGTTTAATGACATTGGAGCATGGCAATTAAATAATTTTTACTCGAGAGAAAAATTAGTGCAGTTGACAGCAGAATGTTCAAGTTGCAATTAGCCTAAAATAATAATAATAAAAGAATATTTGCCTACCCATATACAAAACTAAGCCCATCTCAAGTTACTATTGTTAAAGAATTTGAATAGTCGTCTTCTTTGTTTTGGCCTAGATCTAACCTTGGTTTTATTATGTTAGGAGTCTTTTGGTTATTTCAGAAGTGTTTTAGAACGCTTAGGTAACTAGAATTCTACTTCTTGGGTTTGTTTGCTTGTACGCTAGTATGATGCATCATGTATTTCTATTATGTATGATTATGACCTGTGTTCTTATGAAACTGTGATGCGTTCTGATATGGTTGGGCATGCCTTAATGTTTGTATAAATTTTAAAAGTATAACCTGTTGGAATGCTAGTTTTTGCCAGTTTATACAAGCATGTTTTGAGAATGCTGGAACATACACATAATTTAATGTTGAGTGCATGTTACTGTTTATGTGGTTTTGGGCATAGAACATGTTAATAGAGTAGCATTGTTGGTCTTGGCTTAATCAGGATTGGTGCTATGAGTTTAGAATGGAAAGTAATAGGATTCTTGAGAACGTTGATGGGCCTTGGTGGAGTCAGTCAGGGCCCACGGAGAGGTCGTGGGCTTGGGTAATATCAGTTGGAGCTGATAGAGAG

mRNA sequence

ATGCAATCGTCGTCGCCACCACCGTGTACGGTGGTTCTCAGCCCTTGCGCCGCTTGTAAGATCCTCCGTCGGCGATGTGTCGATAAGTGTATTTTAGCACCATATTTTCCTCCGACTGACCCTTTCAAGTTCGCCGCCGTCCACAGAATATACGGAGCCGGCAACGTCATCAAGTTCTTGCAGGAATTGCCAGAGGGTCAGAGAGCGGACGCTGCAAGTAGTTTGGTATACGAAGCGAATGCGAGAATTCGAGACCCAATCTATGGGTGCACCGGTTCAATATTTCAACTTCAAAATAAAGTGAGGGAGCTGCATGCACAATTAGCTGTGGCAAAGGCTGAGGTTCATAAGATGCAGCAACTTCAACATCCAAATTTCCATCTGATCGCTCGGCTTCCTCTAAATCGGCGTCTCCATTTCTCTTGGTTCCTCTCAATCACCGTCTCCATCTCTCTCGGCTTCCTCTCAATCTCCGCTGATTTCGTTTCCGACTCTCTCCCTGCCGCCCTCTCTCTGTCTCTGCAATTTCTCCACCCACCTTCCAAATCCGCCGCATCGAATTTCTTCGACCTCCCGGACTCGGCCGGCGTCAAGGCGGTGGAGTTTCGAATTGGATTGGGTGAAACCCACCTTGACGGAGACCAGGATTGGTGCTATGAGTTTAGAATGGAAAGTAATAGGATTCTTGAGAACGTTGATGGGCCTTGGTGGAGTCAGTCAGGGCCCACGGAGAGGTCGTGGGCTTGGGTAATATCAGTTGGAGCTGATAGAGAG

Coding sequence (CDS)

ATGCAATCGTCGTCGCCACCACCGTGTACGGTGGTTCTCAGCCCTTGCGCCGCTTGTAAGATCCTCCGTCGGCGATGTGTCGATAAGTGTATTTTAGCACCATATTTTCCTCCGACTGACCCTTTCAAGTTCGCCGCCGTCCACAGAATATACGGAGCCGGCAACGTCATCAAGTTCTTGCAGGAATTGCCAGAGGGTCAGAGAGCGGACGCTGCAAGTAGTTTGGTATACGAAGCGAATGCGAGAATTCGAGACCCAATCTATGGGTGCACCGGTTCAATATTTCAACTTCAAAATAAAGTGAGGGAGCTGCATGCACAATTAGCTGTGGCAAAGGCTGAGGTTCATAAGATGCAGCAACTTCAACATCCAAATTTCCATCTGATCGCTCGGCTTCCTCTAAATCGGCGTCTCCATTTCTCTTGGTTCCTCTCAATCACCGTCTCCATCTCTCTCGGCTTCCTCTCAATCTCCGCTGATTTCGTTTCCGACTCTCTCCCTGCCGCCCTCTCTCTGTCTCTGCAATTTCTCCACCCACCTTCCAAATCCGCCGCATCGAATTTCTTCGACCTCCCGGACTCGGCCGGCGTCAAGGCGGTGGAGTTTCGAATTGGATTGGGTGAAACCCACCTTGACGGAGACCAGGATTGGTGCTATGAGTTTAGAATGGAAAGTAATAGGATTCTTGAGAACGTTGATGGGCCTTGGTGGAGTCAGTCAGGGCCCACGGAGAGGTCGTGGGCTTGGGTAATATCAGTTGGAGCTGATAGAGAG

Protein sequence

MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPNFHLIARLPLNRRLHFSWFLSITVSISLGFLSISADFVSDSLPAALSLSLQFLHPPSKSAASNFFDLPDSAGVKAVEFRIGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQSGPTERSWAWVISVGADRE

Homology

[Close]

BLAST of CSPI05G16950 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-42
Identity = 82/120 (68.33%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 3   SSSPPPC---TVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKF 62
           SSSPPP     VVLSPCAACKILRRRC ++C+LAPYFPPTDP KF   HR++GA N+IKF
Sbjct: 18  SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKF 77

Query: 63  LQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQ 120
           LQELPE QR DA +S+VYEA ARIRDP+YGC G+I+ LQ +V EL AQLA A+ E+  MQ
Sbjct: 78  LQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQ 137

[Close]

BLAST of CSPI05G16950 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 2.3e-41
Identity = 78/114 (68.42%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 6   PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPE 65
           PP   VVLSPCAACKILRRRC DKC+LAPYFPPTDP KF   HR++GA N+IKFLQELPE
Sbjct: 46  PPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPE 105

Query: 66  GQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQ 120
            QR DA +S+VYEA AR+RDP+YGC G+I+ LQ +V EL AQLA  + E+  MQ
Sbjct: 106 SQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQ 159

[Close]

BLAST of CSPI05G16950 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 2.2e-36
Identity = 71/111 (63.96%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 14  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAAS 73
           SPCA+CK+LRRRC   CI APYFPP DP KFA VH+++GA NV K LQELP  QRADA +
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 74  SLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHP 125
           SLV+EANAR+RDP+YGC G+I  LQN+V +L  QLAVA+AE+  +Q    P
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEP 117

[Close]

BLAST of CSPI05G16950 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.6e-34
Identity = 69/113 (61.06%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 14  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAAS 73
           SPCAACK+LRRRC   C+ +PYFP  +P KFA VHR++GA NV K LQELP  QR DA S
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 74  SLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPNF 127
           S+VYEANAR+RDP+YGC G+I  LQ ++  L AQLA+A+AEV  ++  Q  NF
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNF 124

[Close]

BLAST of CSPI05G16950 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 6.0e-34
Identity = 65/117 (55.56%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 4   SSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQEL 63
           S PP     ++PCAACK+LRRRC  +C  +PYF P +P KFA+VH+++GA NV K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 64  PEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ 121
           PE QRADAA+SLVYEAN R+RDP+YGC G+I  LQ +V+ L A+L   ++E+ K +Q
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQ 150

[Close]

BLAST of CSPI05G16950 vs. ExPASy TrEMBL
Match: A0A0A0KU20 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G496470 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 2.3e-65
Identity = 127/146 (86.99%), Postives = 132/146 (90.41%), Query Frame = 0


Query: 1   MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL 60
           MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL
Sbjct: 1   MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL 60

Query: 61  QELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ 120
           QELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ
Sbjct: 61  QELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ 120

Query: 121 LQHPNFHLIARLPLNRRLHFSWFLSI 147
           LQHPN   + R     + ++  F  +
Sbjct: 121 LQHPNLLALPRSQFQEQQNYCIFTQL 146

[Close]

BLAST of CSPI05G16950 vs. ExPASy TrEMBL
Match: A0A6J1FFZ7 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445138 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 5.6e-51
Identity = 103/120 (85.83%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 6   PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPE 65
           PPP  VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQELPE
Sbjct: 8   PPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELPE 67

Query: 66  GQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPN 125
            QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL  QLAVAKAEVHKM   QH N
Sbjct: 68  NQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQVQLAVAKAEVHKM-LAQHAN 126

[Close]

BLAST of CSPI05G16950 vs. ExPASy TrEMBL
Match: A0A6J1JZZ3 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489400 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.2e-47
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 0


Query: 11  VVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRAD 70
           VVLSPCAACKILRRRCVD+C+LAPYFPPT+P KFAAVHRI+GA NVIKFLQELP  QRAD
Sbjct: 2   VVLSPCAACKILRRRCVDECVLAPYFPPTEPLKFAAVHRIFGASNVIKFLQELPGNQRAD 61

Query: 71  AASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQ 120
           A SSLVYEANARIRDP+YGCTGSIFQLQN+V EL AQLA+AKAEVHKMQ
Sbjct: 62  ATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQAQLALAKAEVHKMQ 110

[Close]

BLAST of CSPI05G16950 vs. ExPASy TrEMBL
Match: A0A1D1XNT8 (LOB domain-containing protein 1 OS=Anthurium amnicola OX=1678845 GN=LBD1_0 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 5.1e-44
Identity = 91/124 (73.39%), Postives = 102/124 (82.26%), Query Frame = 0


Query: 3   SSSP-PPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQ 62
           SSSP PP  VVLSPCAACK+LRRRCVDKC+LAPYFPPTDP KF   HR++GA N+IKFLQ
Sbjct: 25  SSSPLPPPVVVLSPCAACKVLRRRCVDKCLLAPYFPPTDPVKFTIAHRVFGASNIIKFLQ 84

Query: 63  ELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQL 122
           ELPE QRADA SS+VYEANARIRDP+YGC G+IFQL  +V EL AQLA A+AE H   + 
Sbjct: 85  ELPESQRADAVSSMVYEANARIRDPVYGCAGAIFQLHEQVTELQAQLATAQAE-HTSMKA 144

Query: 123 QHPN 126
           QH N
Sbjct: 145 QHSN 147

[Close]

BLAST of CSPI05G16950 vs. ExPASy TrEMBL
Match: A0A7J0HBZ9 (LOB domain-containing protein 11 OS=Actinidia rufa OX=165716 GN=Acr_28g0012000 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 8.7e-44
Identity = 87/120 (72.50%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 3   SSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQE 62
           S+SPPP  VVLSPCAACKILRRRC +KC+LAPYFPPTDP KF   HR++GA N+IKFLQE
Sbjct: 24  STSPPPSQVVLSPCAACKILRRRCAEKCVLAPYFPPTDPIKFTTAHRVFGASNIIKFLQE 83

Query: 63  LPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQ 122
           LPE +RADA SS+VYEANAR+RDP+YG  GSIFQLQN+V EL AQLA A+A++  MQ  Q
Sbjct: 84  LPESRRADAVSSMVYEANARLRDPVYGSAGSIFQLQNQVNELQAQLAKAQAQLVTMQSQQ 143

[Close]

BLAST of CSPI05G16950 vs. NCBI nr
Match: KAE8648523.1 (hypothetical protein Csa_008698 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 7.1e-117
Identity = 218/258 (84.50%), Postives = 221/258 (85.66%), Query Frame = 0


Query: 1   MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL 60
           MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL
Sbjct: 1   MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL 60

Query: 61  QELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ 120
           QELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ
Sbjct: 61  QELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ 120

Query: 121 LQHPNFHLIARLPLNRRLHFSWFLSITVSISLGFLSISADFVSDSLPAALSLSLQFLHPP 180
           LQHPN   + R                   SL   S+      +     LSLSLQFLHPP
Sbjct: 121 LQHPNLLALPR-------------------SLQIFSLPRQSRLE-----LSLSLQFLHPP 180

Query: 181 SKSAASNFFDLPDSAGVKAVEFRIGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQS 240
           SKSAASNFFDLPDSAGVKAVEFRIGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQS
Sbjct: 181 SKSAASNFFDLPDSAGVKAVEFRIGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQS 234

Query: 241 GPTERSWAWVISVGADRE 259
           GPTERSWAWVISVGADRE
Sbjct: 241 GPTERSWAWVISVGADRE 234

[Close]

BLAST of CSPI05G16950 vs. NCBI nr
Match: KAG7016272.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 215.3 bits (547), Expect = 6.1e-52
Identity = 105/120 (87.50%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 6   PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPE 65
           PPP  VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQELPE
Sbjct: 7   PPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELPE 66

Query: 66  GQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPN 125
            QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL AQLAVAKAEVHKM Q QH N
Sbjct: 67  NQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQAQLAVAKAEVHKM-QAQHAN 125

[Close]

BLAST of CSPI05G16950 vs. NCBI nr
Match: KAG6578743.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 215.3 bits (547), Expect = 6.1e-52
Identity = 105/120 (87.50%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 6   PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPE 65
           PPP  VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQELPE
Sbjct: 7   PPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELPE 66

Query: 66  GQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPN 125
            QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL AQLAVAKAEVHKM Q QH N
Sbjct: 67  NQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQAQLAVAKAEVHKM-QAQHAN 125

[Close]

BLAST of CSPI05G16950 vs. NCBI nr
Match: XP_022939142.1 (LOB domain-containing protein 1-like [Cucurbita moschata])

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-50
Identity = 103/120 (85.83%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 6   PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPE 65
           PPP  VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQELPE
Sbjct: 8   PPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELPE 67

Query: 66  GQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPN 125
            QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL  QLAVAKAEVHKM   QH N
Sbjct: 68  NQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQVQLAVAKAEVHKM-LAQHAN 126

[Close]

BLAST of CSPI05G16950 vs. NCBI nr
Match: XP_023551518.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.1 bits (531), Expect = 4.4e-50
Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 11  VVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRAD 70
           VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQELPE QRAD
Sbjct: 2   VVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELPENQRAD 61

Query: 71  AASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPN 126
           A SSLVYEANARIRDPIYGCTGSIFQLQN+V EL AQLAVAKAEVHKM Q QH N
Sbjct: 62  ATSSLVYEANARIRDPIYGCTGSIFQLQNQVSELQAQLAVAKAEVHKM-QAQHAN 115

[Close]

BLAST of CSPI05G16950 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 174.1 bits (440), Expect = 1.5e-43
Identity = 82/120 (68.33%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 3   SSSPPPC---TVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKF 62
           SSSPPP     VVLSPCAACKILRRRC ++C+LAPYFPPTDP KF   HR++GA N+IKF
Sbjct: 18  SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKF 77

Query: 63  LQELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQ 120
           LQELPE QR DA +S+VYEA ARIRDP+YGC G+I+ LQ +V EL AQLA A+ E+  MQ
Sbjct: 78  LQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQ 137

[Close]

BLAST of CSPI05G16950 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-42
Identity = 78/114 (68.42%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 6   PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPE 65
           PP   VVLSPCAACKILRRRC DKC+LAPYFPPTDP KF   HR++GA N+IKFLQELPE
Sbjct: 46  PPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPE 105

Query: 66  GQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQ 120
            QR DA +S+VYEA AR+RDP+YGC G+I+ LQ +V EL AQLA  + E+  MQ
Sbjct: 106 SQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQ 159

[Close]

BLAST of CSPI05G16950 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.6e-37
Identity = 71/111 (63.96%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 14  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAAS 73
           SPCA+CK+LRRRC   CI APYFPP DP KFA VH+++GA NV K LQELP  QRADA +
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 74  SLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHP 125
           SLV+EANAR+RDP+YGC G+I  LQN+V +L  QLAVA+AE+  +Q    P
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEP 117

[Close]

BLAST of CSPI05G16950 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-35
Identity = 69/113 (61.06%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 14  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPEGQRADAAS 73
           SPCAACK+LRRRC   C+ +PYFP  +P KFA VHR++GA NV K LQELP  QR DA S
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 74  SLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPNF 127
           S+VYEANAR+RDP+YGC G+I  LQ ++  L AQLA+A+AEV  ++  Q  NF
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNF 124

[Close]

BLAST of CSPI05G16950 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 146.0 bits (367), Expect = 4.3e-35
Identity = 65/117 (55.56%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 4   SSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQEL 63
           S PP     ++PCAACK+LRRRC  +C  +PYF P +P KFA+VH+++GA NV K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 64  PEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ 121
           PE QRADAA+SLVYEAN R+RDP+YGC G+I  LQ +V+ L A+L   ++E+ K +Q
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQ 150

The following BLAST results are available for this feature:

BLAST of CSPI05G16950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	2.1e-42	68.33	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	2.3e-41	68.42	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q8LBW3	2.2e-36	63.96	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	1.6e-34	61.06	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8L5T5	6.0e-34	55.56	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of CSPI05G16950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU20	2.3e-65	86.99	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G496470 PE=3 SV...	[more]
A0A6J1FFZ7	5.6e-51	85.83	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1JZZ3	2.2e-47	87.16	LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489400...	[more]
A0A1D1XNT8	5.1e-44	73.39	LOB domain-containing protein 1 OS=Anthurium amnicola OX=1678845 GN=LBD1_0 PE=3 ...	[more]
A0A7J0HBZ9	8.7e-44	72.50	LOB domain-containing protein 11 OS=Actinidia rufa OX=165716 GN=Acr_28g0012000 P...	[more]

BLAST of CSPI05G16950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648523.1	7.1e-117	84.50	hypothetical protein Csa_008698 [Cucumis sativus]	[more]
KAG7016272.1	6.1e-52	87.50	LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6578743.1	6.1e-52	87.50	LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022939142.1	1.2e-50	85.83	LOB domain-containing protein 1-like [Cucurbita moschata]	[more]
XP_023551518.1	4.4e-50	89.57	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI05G16950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	1.5e-43	68.33	LOB domain-containing protein 1	[more]
AT2G28500.1	1.6e-42	68.42	LOB domain-containing protein 11	[more]
AT2G30130.1	1.6e-37	63.96	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	1.1e-35	61.06	LOB domain-containing protein 4	[more]
AT2G40470.1	4.3e-35	55.56	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..121
None	No IPR available	PANTHER	PTHR31301:SF14	DOMAIN PROTEIN 1, PUTATIVE, EXPRESSED-RELATED	coord: 9..129
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 9..129
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..112 e-value: 3.5E-39 score: 133.4
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 25.567112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G16950.1	CSPI05G16950.1	mRNA