CSPI05G15850 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G15850
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Coiled-coil domain-containing protein 86
Location	Chr5: 16921989 .. 16922997 (+)
RNA-Seq Expression	CSPI05G15850
Synteny	CSPI05G15850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTTTTTCACTCTCAGCAGCTTCAAGCTCTGAAACCCTAATCCCCAAATCTCTTCCATGGCGTGCACAATCGACTTCCGCCGCCTGGATGAGGGCTTTGGTGGAAAAACCTATAAGAGAAAGCGTGAAGAAGCTGAGAAAAGCCTCATCATCACTGAATCTGAAAATGCCGACACCGGAATGGAGATTGACGACTCACTTCCACCACCACCTGCCAAGCGATCCGCTATTCCTTCGTCAGAAAATCCTGATAAACCGACTTACGGAAACCCCACTTACGACGGCGTGATCGGGGGAAAAGTCTCCGGACGGAAGTGGAAACAGGCGCGGAAGCACAGGACGTCGGCTATGCAGGTGAGCCGTAAAGGCACGACGTTCGAGGAGAGGGAGAGGCAGAAGATGATTAAGGCGGCGTTTAAGGAACGGAAGGAGGAATTGAAGGAGCAGATTAGGTTAAATAAGGTGGAGAAGAGAAAGAAGAGGGAGGAGAGAGAGAAGAAGAAGAAGGAAAACATATTGAGATCTGGAACTAAGCTACAAAAGATTACAAATCCCAAAACGCTGAAGAAGATTGCTAAGTCTAAGCAAAAGAAGCTCCTCAAGGTTGTTCCTGAGGATTACATCAAAAAATAGGTCCGTCGCTTTTGTTCTAAGGTTTTCCCACCATCTTTAAATAGATTTATCAGTTTTGAATCTTGGAATTTTGCCTGTAATCATAAAAATGTTAGCATAACAATATTAAAAATTTTGATTAAACATCTTATTCCGATCATTTATAAGGCACAGCGATGGTACGTAATCTTAATGTTAGATGTTTCCGTAGTTCTCATTCGTTTTCTCACCATATAAAATTGTGTAGCAATTGGGTGTATAAAAGTTTGAAGAAAACTATGAAAGAGAGTTCATTGCTCATCGCATGTAATCATTAGGAAGTTTAAATCTTCACTTTGAAAAAAACATAGATTAGACAAATAAATTTGAGCGACTGGGTTCATCATTTAGTGGGGAC

mRNA sequence

TCCTTTTTCACTCTCAGCAGCTTCAAGCTCTGAAACCCTAATCCCCAAATCTCTTCCATGGCGTGCACAATCGACTTCCGCCGCCTGGATGAGGGCTTTGGTGGAAAAACCTATAAGAGAAAGCGTGAAGAAGCTGAGAAAAGCCTCATCATCACTGAATCTGAAAATGCCGACACCGGAATGGAGATTGACGACTCACTTCCACCACCACCTGCCAAGCGATCCGCTATTCCTTCGTCAGAAAATCCTGATAAACCGACTTACGGAAACCCCACTTACGACGGCGTGATCGGGGGAAAAGTCTCCGGACGGAAGTGGAAACAGGCGCGGAAGCACAGGACGTCGGCTATGCAGGTGAGCCGTAAAGGCACGACGTTCGAGGAGAGGGAGAGGCAGAAGATGATTAAGGCGGCGTTTAAGGAACGGAAGGAGGAATTGAAGGAGCAGATTAGGTTAAATAAGGTGGAGAAGAGAAAGAAGAGGGAGGAGAGAGAGAAGAAGAAGAAGGAAAACATATTGAGATCTGGAACTAAGCTACAAAAGATTACAAATCCCAAAACGCTGAAGAAGATTGCTAAGTCTAAGCAAAAGAAGCTCCTCAAGGTTGTTCCTGAGGATTACATCAAAAAATAGGTCCGTCGCTTTTGTTCTAAGGTTTTCCCACCATCTTTAAATAGATTTATCAGTTTTGAATCTTGGAATTTTGCCTGTAATCATAAAAATGTTAGCATAACAATATTAAAAATTTTGATTAAACATCTTATTCCGATCATTTATAAGGCACAGCGATGGTACGTAATCTTAATGTTAGATGTTTCCGTAGTTCTCATTCGTTTTCTCACCATATAAAATTGTGTAGCAATTGGGTGTATAAAAGTTTGAAGAAAACTATGAAAGAGAGTTCATTGCTCATCGCATGTAATCATTAGGAAGTTTAAATCTTCACTTTGAAAAAAACATAGATTAGACAAATAAATTTGAGCGACTGGGTTCATCATTTAGTGGGGAC

Coding sequence (CDS)

ATGGCGTGCACAATCGACTTCCGCCGCCTGGATGAGGGCTTTGGTGGAAAAACCTATAAGAGAAAGCGTGAAGAAGCTGAGAAAAGCCTCATCATCACTGAATCTGAAAATGCCGACACCGGAATGGAGATTGACGACTCACTTCCACCACCACCTGCCAAGCGATCCGCTATTCCTTCGTCAGAAAATCCTGATAAACCGACTTACGGAAACCCCACTTACGACGGCGTGATCGGGGGAAAAGTCTCCGGACGGAAGTGGAAACAGGCGCGGAAGCACAGGACGTCGGCTATGCAGGTGAGCCGTAAAGGCACGACGTTCGAGGAGAGGGAGAGGCAGAAGATGATTAAGGCGGCGTTTAAGGAACGGAAGGAGGAATTGAAGGAGCAGATTAGGTTAAATAAGGTGGAGAAGAGAAAGAAGAGGGAGGAGAGAGAGAAGAAGAAGAAGGAAAACATATTGAGATCTGGAACTAAGCTACAAAAGATTACAAATCCCAAAACGCTGAAGAAGATTGCTAAGTCTAAGCAAAAGAAGCTCCTCAAGGTTGTTCCTGAGGATTACATCAAAAAATAG

Protein sequence

MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK*

Homology

[Close]

BLAST of CSPI05G15850 vs. ExPASy TrEMBL
Match: A0A0A0KNG5 (Coiled-coil domain-containing protein 86 OS=Cucumis sativus OX=3659 GN=Csa_5G458280 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.4e-93
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60
           MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60

Query: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120
           SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF
Sbjct: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120

Query: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180
           KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL
Sbjct: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180

Query: 181 LKVVPEDYIKK 192
           LKVVPEDYIKK
Sbjct: 181 LKVVPEDYIKK 191

[Close]

BLAST of CSPI05G15850 vs. ExPASy TrEMBL
Match: A0A5D3BKZ5 (Coiled-coil domain-containing protein 86 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00280 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.1e-91
Identity = 188/191 (98.43%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60
           MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADT MEIDDSLPPPPAKRSAIPS
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPS 60

Query: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120
           SENPDKPTYGNPTYDGVI GKVSGRKWKQ RKHRTSAMQVSRKGTTFEERERQKMIKAAF
Sbjct: 61  SENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQVSRKGTTFEERERQKMIKAAF 120

Query: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180
           KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL
Sbjct: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180

Query: 181 LKVVPEDYIKK 192
           LKVVPEDYIKK
Sbjct: 181 LKVVPEDYIKK 191

[Close]

BLAST of CSPI05G15850 vs. ExPASy TrEMBL
Match: A0A1S3CP36 (Coiled-coil domain-containing protein 86 OS=Cucumis melo OX=3656 GN=LOC103503157 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.1e-91
Identity = 188/191 (98.43%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60
           MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADT MEIDDSLPPPPAKRSAIPS
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPS 60

Query: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120
           SENPDKPTYGNPTYDGVI GKVSGRKWKQ RKHRTSAMQVSRKGTTFEERERQKMIKAAF
Sbjct: 61  SENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQVSRKGTTFEERERQKMIKAAF 120

Query: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180
           KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL
Sbjct: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180

Query: 181 LKVVPEDYIKK 192
           LKVVPEDYIKK
Sbjct: 181 LKVVPEDYIKK 191

[Close]

BLAST of CSPI05G15850 vs. ExPASy TrEMBL
Match: A0A6J1FHS9 (Coiled-coil domain-containing protein 86 OS=Cucurbita moschata OX=3662 GN=LOC111445465 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.9e-80
Identity = 171/191 (89.53%), Postives = 178/191 (93.19%), Query Frame = 0


Query: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60
           MACTIDFRRLDEGFGGKTYKRKREEAE SL I  SENAD  M++D+SL  PP KRSAIPS
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEAESSLNIISSENADASMDVDESL--PPLKRSAIPS 60

Query: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120
           SENPDKPT+GNPTYDGVI GKVSGRKWKQ RKHRTSAM VSRKGTTFEERERQKMIKAA+
Sbjct: 61  SENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMLVSRKGTTFEERERQKMIKAAY 120

Query: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180
           +ERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL
Sbjct: 121 RERKEELKEQIRSNKVEKRKKKEEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180

Query: 181 LKVVPEDYIKK 192
           LKVVPEDYIKK
Sbjct: 181 LKVVPEDYIKK 189

[Close]

BLAST of CSPI05G15850 vs. ExPASy TrEMBL
Match: A0A6J1JYC3 (Coiled-coil domain-containing protein 86 OS=Cucurbita maxima OX=3661 GN=LOC111488987 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.5e-80
Identity = 171/191 (89.53%), Postives = 178/191 (93.19%), Query Frame = 0


Query: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60
           MACTIDFRRLDEGFGGKTYKRKREEAE SL I  SENAD  M++D+SL  PP KRSAIPS
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEAESSLNIISSENADASMDVDESL--PPFKRSAIPS 60

Query: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120
           SENPDKPT+GNPTYDGVI GKVSGRKWKQ RKHRTSAM VSRKGTTFEERERQKMIKAA+
Sbjct: 61  SENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMLVSRKGTTFEERERQKMIKAAY 120

Query: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180
           +ERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL
Sbjct: 121 RERKEELKEQIRSNKVEKRKKKEEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180

Query: 181 LKVVPEDYIKK 192
           LKVVPEDYIKK
Sbjct: 181 LKVVPEDYIKK 189

[Close]

BLAST of CSPI05G15850 vs. NCBI nr
Match: XP_004143761.1 (protein PXR1 [Cucumis sativus] >KGN51128.1 hypothetical protein Csa_009132 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 9.1e-93
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60
           MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60

Query: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120
           SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF
Sbjct: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120

Query: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180
           KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL
Sbjct: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180

Query: 181 LKVVPEDYIKK 192
           LKVVPEDYIKK
Sbjct: 181 LKVVPEDYIKK 191

[Close]

BLAST of CSPI05G15850 vs. NCBI nr
Match: XP_008465532.1 (PREDICTED: protein PXR1 [Cucumis melo] >KAA0066071.1 protein PXR1 [Cucumis melo var. makuwa] >TYJ99826.1 protein PXR1 [Cucumis melo var. makuwa])

HSP 1 Score: 344.0 bits (881), Expect = 8.5e-91
Identity = 188/191 (98.43%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60
           MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADT MEIDDSLPPPPAKRSAIPS
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPS 60

Query: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120
           SENPDKPTYGNPTYDGVI GKVSGRKWKQ RKHRTSAMQVSRKGTTFEERERQKMIKAAF
Sbjct: 61  SENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQVSRKGTTFEERERQKMIKAAF 120

Query: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180
           KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL
Sbjct: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180

Query: 181 LKVVPEDYIKK 192
           LKVVPEDYIKK
Sbjct: 181 LKVVPEDYIKK 191

[Close]

BLAST of CSPI05G15850 vs. NCBI nr
Match: XP_038874831.1 (protein PXR1 [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 4.1e-85
Identity = 181/191 (94.76%), Postives = 184/191 (96.34%), Query Frame = 0


Query: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60
           MACTIDFRRLDEGFGGKTYKRKREEAEKSL ITESENADT MEIDDSL PPP+KRSAIPS
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADTSMEIDDSL-PPPSKRSAIPS 60

Query: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120
           SENPDKPT+ NPTYDGVI GKVSGRKWKQ RKHRTSAMQVSRKGTTFEERERQK IKAAF
Sbjct: 61  SENPDKPTFENPTYDGVIAGKVSGRKWKQPRKHRTSAMQVSRKGTTFEERERQKKIKAAF 120

Query: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180
           +ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL
Sbjct: 121 RERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180

Query: 181 LKVVPEDYIKK 192
           LKVVPEDYIKK
Sbjct: 181 LKVVPEDYIKK 190

[Close]

BLAST of CSPI05G15850 vs. NCBI nr
Match: XP_022939634.1 (protein PXR1 [Cucurbita moschata] >XP_023550361.1 protein PXR1 [Cucurbita pepo subsp. pepo] >KAG6579102.1 hypothetical protein SDJN03_23550, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.5 bits (789), Expect = 4.0e-80
Identity = 171/191 (89.53%), Postives = 178/191 (93.19%), Query Frame = 0


Query: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60
           MACTIDFRRLDEGFGGKTYKRKREEAE SL I  SENAD  M++D+SL  PP KRSAIPS
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEAESSLNIISSENADASMDVDESL--PPLKRSAIPS 60

Query: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120
           SENPDKPT+GNPTYDGVI GKVSGRKWKQ RKHRTSAM VSRKGTTFEERERQKMIKAA+
Sbjct: 61  SENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMLVSRKGTTFEERERQKMIKAAY 120

Query: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180
           +ERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL
Sbjct: 121 RERKEELKEQIRSNKVEKRKKKEEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180

Query: 181 LKVVPEDYIKK 192
           LKVVPEDYIKK
Sbjct: 181 LKVVPEDYIKK 189

[Close]

BLAST of CSPI05G15850 vs. NCBI nr
Match: XP_022992739.1 (protein PXR1 [Cucurbita maxima])

HSP 1 Score: 308.1 bits (788), Expect = 5.2e-80
Identity = 171/191 (89.53%), Postives = 178/191 (93.19%), Query Frame = 0


Query: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60
           MACTIDFRRLDEGFGGKTYKRKREEAE SL I  SENAD  M++D+SL  PP KRSAIPS
Sbjct: 1   MACTIDFRRLDEGFGGKTYKRKREEAESSLNIISSENADASMDVDESL--PPFKRSAIPS 60

Query: 61  SENPDKPTYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIKAAF 120
           SENPDKPT+GNPTYDGVI GKVSGRKWKQ RKHRTSAM VSRKGTTFEERERQKMIKAA+
Sbjct: 61  SENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMLVSRKGTTFEERERQKMIKAAY 120

Query: 121 KERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180
           +ERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL
Sbjct: 121 RERKEELKEQIRSNKVEKRKKKEEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKL 180

Query: 181 LKVVPEDYIKK 192
           LKVVPEDYIKK
Sbjct: 181 LKVVPEDYIKK 189

[Close]

BLAST of CSPI05G15850 vs. TAIR 10
Match: AT2G31410.1 (unknown protein; Has 1719 Blast hits to 1091 proteins in 184 species: Archae - 5; Bacteria - 24; Metazoa - 559; Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes - 769 (source: NCBI BLink). )

HSP 1 Score: 198.4 bits (503), Expect = 5.4e-51
Identity = 121/193 (62.69%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 1   MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTGMEIDDSLPPPPAKRSAIPS 60
           MACT+DFR LDEGFGGKTYKRKRE  E++    E+   +  M+ID +  PP AKRSA+ S
Sbjct: 1   MACTVDFRCLDEGFGGKTYKRKRESQEQA--AAEAIADEASMDIDGA--PPAAKRSAVAS 60

Query: 61  SENPDKP---TYGNPTYDGVIGGKVSGRKWKQARKHRTSAMQVSRKGTTFEERERQKMIK 120
           SENPDKP       PTYDGVI GKVSGR WKQ R HR+S   V  +    EE +RQ+ IK
Sbjct: 61  SENPDKPIALAVERPTYDGVIAGKVSGRNWKQPRTHRSSGRFVKNRKPDLEEMKRQREIK 120

Query: 121 AAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-K 180
            A+KER  ELKE+IR NKVEKRKK+EEREK+KKEN+LR+GTKLQKITNPKTLKKI+ S K
Sbjct: 121 KAYKERVNELKEEIRSNKVEKRKKKEEREKRKKENVLRTGTKLQKITNPKTLKKISMSKK 180

Query: 181 QKKLLKVVPEDYI 190
           Q+K LK +P++ +
Sbjct: 181 QRKQLKKIPDEML 189

The following BLAST results are available for this feature:

BLAST of CSPI05G15850 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G15850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNG5	4.4e-93	100.00	Coiled-coil domain-containing protein 86 OS=Cucumis sativus OX=3659 GN=Csa_5G458...	[more]
A0A5D3BKZ5	4.1e-91	98.43	Coiled-coil domain-containing protein 86 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CP36	4.1e-91	98.43	Coiled-coil domain-containing protein 86 OS=Cucumis melo OX=3656 GN=LOC103503157...	[more]
A0A6J1FHS9	1.9e-80	89.53	Coiled-coil domain-containing protein 86 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JYC3	2.5e-80	89.53	Coiled-coil domain-containing protein 86 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of CSPI05G15850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143761.1	9.1e-93	100.00	protein PXR1 [Cucumis sativus] >KGN51128.1 hypothetical protein Csa_009132 [Cucu...	[more]
XP_008465532.1	8.5e-91	98.43	PREDICTED: protein PXR1 [Cucumis melo] >KAA0066071.1 protein PXR1 [Cucumis melo ...	[more]
XP_038874831.1	4.1e-85	94.76	protein PXR1 [Benincasa hispida]	[more]
XP_022939634.1	4.0e-80	89.53	protein PXR1 [Cucurbita moschata] >XP_023550361.1 protein PXR1 [Cucurbita pepo s...	[more]
XP_022992739.1	5.2e-80	89.53	protein PXR1 [Cucurbita maxima]	[more]

BLAST of CSPI05G15850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31410.1	5.4e-51	62.69	unknown protein; Has 1719 Blast hits to 1091 proteins in 184 species: Archae - 5...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 110..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..111
None	No IPR available	PANTHER	PTHR13557:SF2	BNAA04G18300D PROTEIN	coord: 1..188
IPR005579	Cgr1-like	PFAM	PF03879	Cgr1	coord: 79..182 e-value: 8.5E-7 score: 29.3
IPR026570	Coiled-coil domain-containing protein 86	PANTHER	PTHR13557	UNCHARACTERIZED	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G15850.1	CSPI05G15850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus