Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGCATCTCGCAGCAAACAAAGGAGAATGGTGGAATGCTGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGCAATCCTCGATGCCCAAGGAGTTTGGGAAGCAATAGAGCCAGCGAGAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGCGTGCATACATTCTCCAATGCATCCTGGAAGATGTTCTTCTACAAGTCGCTAAGAAGAAGACCGCAAAGGAAATATGGGATAGTCTCAAGACAAGGTACTTGGGCAGTGAGCGAGTGAAGATGGCGAGAGTTCAAACCTTGAAAAGTGAGTTTAATGTTCTTCAGATGAAGGAAACCGAGACGATCGATGAGTTTGCAGGAAAAATCAGCGGATTAGGAAGCAAGTTCACCACCCTCGAAGTTGCACTTGAGGATTCATCATTAGTCAAGAAGCTCATCGATTCCGTCCCCGAAAAATATCTTCCCATTGTCGCCGGAATGAGCAATTTCAAGATCTCGAAACCATGCCATTTGAAGAAGCAATTGGACAGATGA
mRNA sequence
ATGGCAAGCATCTCGCAGCAAACAAAGGAGAATGGTGGAATGCTGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGCAATCCTCGATGCCCAAGGAGTTTGGGAAGCAATAGAGCCAGCGAGAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGCGTGCATACATTCTCCAATGCATCCTGGAAGATGTTCTTCTACAAGTCGCTAAGAAGAAGACCGCAAAGGAAATATGGGATAGTCTCAAGACAAGGTACTTGGGCAGTGAGCGAGTGAAGATGGCGAGAGTTCAAACCTTGAAAAGTGAGTTTAATGTTCTTCAGATGAAGGAAACCGAGACGATCGATGAGTTTGCAGGAAAAATCAGCGGATTAGGAAGCAAGTTCACCACCCTCGAAGTTGCACTTGAGGATTCATCATTAGTCAAGAAGCTCATCGATTCCGTCCCCGAAAAATATCTTCCCATTGTCGCCGGAATGAGCAATTTCAAGATCTCGAAACCATGCCATTTGAAGAAGCAATTGGACAGATGA
Coding sequence (CDS)
ATGGCAAGCATCTCGCAGCAAACAAAGGAGAATGGTGGAATGCTGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGCAATCCTCGATGCCCAAGGAGTTTGGGAAGCAATAGAGCCAGCGAGAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGCGTGCATACATTCTCCAATGCATCCTGGAAGATGTTCTTCTACAAGTCGCTAAGAAGAAGACCGCAAAGGAAATATGGGATAGTCTCAAGACAAGGTACTTGGGCAGTGAGCGAGTGAAGATGGCGAGAGTTCAAACCTTGAAAAGTGAGTTTAATGTTCTTCAGATGAAGGAAACCGAGACGATCGATGAGTTTGCAGGAAAAATCAGCGGATTAGGAAGCAAGTTCACCACCCTCGAAGTTGCACTTGAGGATTCATCATTAGTCAAGAAGCTCATCGATTCCGTCCCCGAAAAATATCTTCCCATTGTCGCCGGAATGAGCAATTTCAAGATCTCGAAACCATGCCATTTGAAGAAGCAATTGGACAGATGA
Protein sequence
MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFKISKPCHLKKQLDR*
Homology
BLAST of CSPI05G14840 vs. ExPASy TrEMBL
Match:
A0A5A7SWG6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G001050 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 1.6e-52
Identity = 110/134 (82.09%), Postives = 121/134 (90.30%), Query Frame = 0
Query: 52 AEVDVKKDKKARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKS 111
A+V+ KKDK ARAYILQCI +DVLLQ+AKKKTAKEIWDSLK +YLGSERVKMARVQTLK
Sbjct: 4 AKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKR 63
Query: 112 EFNVLQMKETETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSN 171
EF+VLQMKETETIDEFAGKISGL SKF+TL VALEDSSLVKKL+DSVP KYLPI+AG+
Sbjct: 64 EFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLVKKLLDSVPNKYLPIIAGIEQ 123
Query: 172 FKISKPCHLKKQLD 186
KIS PCHLKK+ D
Sbjct: 124 SKISTPCHLKKRSD 137
BLAST of CSPI05G14840 vs. ExPASy TrEMBL
Match:
A0A251VAV7 (Putative zinc finger, CCHC-type OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g0090001 PE=4 SV=1)
HSP 1 Score: 201.1 bits (510), Expect = 4.2e-48
Identity = 99/171 (57.89%), Postives = 129/171 (75.44%), Query Frame = 0
Query: 2 ASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKK 61
A+ S KE + + P LT NYT W IK EA++DAQG+WE++EP A +D KK+K
Sbjct: 40 ATTSLIPKETNSVSLQIPTLTATNYTTWAIKMEAVMDAQGLWESVEPPANAVLDEKKNKT 99
Query: 62 ARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKET 121
ARA+I Q I EDVLLQVAKKKTAKEIW+SLKTRY+G+ERV+ AR+ TL SEF L+ K+
Sbjct: 100 ARAFIFQAIPEDVLLQVAKKKTAKEIWESLKTRYVGAERVQKARLHTLNSEFESLKRKDE 159
Query: 122 ETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF 173
E+ID+FAGK+SGLGSK+ +L LED LV+KL+D+VP++YL +VA M +
Sbjct: 160 ESIDDFAGKLSGLGSKYNSLGSTLEDGKLVRKLLDAVPDRYLQLVASMEQY 210
BLAST of CSPI05G14840 vs. ExPASy TrEMBL
Match:
A0A5N6NYJ8 (CCHC-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_16352 PE=4 SV=1)
HSP 1 Score: 200.3 bits (508), Expect = 7.2e-48
Identity = 96/172 (55.81%), Postives = 132/172 (76.74%), Query Frame = 0
Query: 1 MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDK 60
+A+ S K+ + + P LT NYT W IK EA++DAQG+WE+IEP GA VD KK+K
Sbjct: 412 VATTSATPKDPSSVSLQIPSLTATNYTTWAIKMEAVMDAQGLWESIEPTPGAAVDEKKNK 471
Query: 61 KARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKE 120
+RA+I Q I EDVLLQVAKKKTAKEIWDSLK RY+G++RV+ AR+ TLK+EF +L+MKE
Sbjct: 472 TSRAFIFQAIPEDVLLQVAKKKTAKEIWDSLKIRYMGADRVQKARLHTLKNEFELLKMKE 531
Query: 121 TETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF 173
E++DEFAGK++G+ +K+ +L ++D LV+KL+DSVP+KYL +VA + +
Sbjct: 532 GESVDEFAGKLAGMVTKYNSLGYTIKDEDLVRKLLDSVPDKYLQLVASIEQY 583
BLAST of CSPI05G14840 vs. ExPASy TrEMBL
Match:
A0A5N6M0G6 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_34946 PE=4 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 1.2e-47
Identity = 98/172 (56.98%), Postives = 130/172 (75.58%), Query Frame = 0
Query: 1 MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDK 60
+A+ SQ KE G + + P LT NYT W IK EA++DAQG+WE +EP GA VD +K+K
Sbjct: 3 VATTSQAPKEAGSVSLQIPTLTATNYTTWAIKMEAVMDAQGLWECVEPVAGATVDERKNK 62
Query: 61 KARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKE 120
ARA+I Q I EDVL+QVAKKKTA EIW+SLK RY+G++RV+ AR+ TLK+EF +L+MKE
Sbjct: 63 TARAFIFQAIPEDVLMQVAKKKTAMEIWESLKARYVGADRVQKARLNTLKTEFELLKMKE 122
Query: 121 TETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF 173
E+IDEFAGK+S + +K+ +L LED LV KL+DSVPEK+L +VA + +
Sbjct: 123 GESIDEFAGKLSSMVAKYNSLGSTLEDKVLVGKLLDSVPEKFLQLVASIEQY 174
BLAST of CSPI05G14840 vs. ExPASy TrEMBL
Match:
Q0JH75 (Os01g0879800 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0879800 PE=4 SV=1)
HSP 1 Score: 199.1 bits (505), Expect = 1.6e-47
Identity = 96/168 (57.14%), Postives = 128/168 (76.19%), Query Frame = 0
Query: 5 SQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARA 64
+ ++ G + + YP+LT NY+ W IK EA ++AQG+W+AIEPA VD+KKDK+ARA
Sbjct: 17 ASRSMREGIVSLPYPVLTSTNYSTWAIKMEANMEAQGIWDAIEPAADEAVDIKKDKQARA 76
Query: 65 YILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKETETI 124
+ + EDVL Q+AKKKTAKE+W+SLKTR+LG ERVK ARVQTLKS+F L MK+TE+I
Sbjct: 77 CLFGAVPEDVLQQIAKKKTAKEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTESI 136
Query: 125 DEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNF 173
DEFAGKISGL +K + L V ++D VKKL+DSVP+K+L ++A + F
Sbjct: 137 DEFAGKISGLANKLSDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQF 184
BLAST of CSPI05G14840 vs. NCBI nr
Match:
XP_031745073.1 (uncharacterized protein LOC116405251 [Cucumis sativus])
HSP 1 Score: 302.8 bits (774), Expect = 2.1e-78
Identity = 155/173 (89.60%), Postives = 162/173 (93.64%), Query Frame = 0
Query: 1 MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDK 60
M S SQQTKENGGM ILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDK
Sbjct: 1 MTSTSQQTKENGGMPILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDK 60
Query: 61 KARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKE 120
KA AYILQCI EDVLLQ+AKKKTAKEIWDSLKTRYLGSERVKMARVQTLK EFNVL+MKE
Sbjct: 61 KACAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKREFNVLRMKE 120
Query: 121 TETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK 174
TE IDEFAGKISGL SKFTTL VAL+DSSLVKKL+DSVP+KYLPIVAG+ F+
Sbjct: 121 TEMIDEFAGKISGLASKFTTLGVALKDSSLVKKLLDSVPDKYLPIVAGIEQFQ 173
BLAST of CSPI05G14840 vs. NCBI nr
Match:
XP_031737549.1 (uncharacterized protein LOC116402439 [Cucumis sativus])
HSP 1 Score: 302.4 bits (773), Expect = 2.8e-78
Identity = 156/173 (90.17%), Postives = 164/173 (94.80%), Query Frame = 0
Query: 1 MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDK 60
MASISQQTKENGGM ILY MLTPHNYTVWTIKAEAILDAQGV EAIEPARGAEVDVKKDK
Sbjct: 1 MASISQQTKENGGMSILYSMLTPHNYTVWTIKAEAILDAQGVREAIEPARGAEVDVKKDK 60
Query: 61 KARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKE 120
KAR+YILQCI EDVLLQ+AKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEF+VL+MKE
Sbjct: 61 KARSYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFSVLRMKE 120
Query: 121 TETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK 174
TETIDEFAGKISGL SKFTTL VALEDSSLVKKL+DSVP+KYLPIV G+ F+
Sbjct: 121 TETIDEFAGKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLPIVVGIEQFQ 173
BLAST of CSPI05G14840 vs. NCBI nr
Match:
XP_031741713.1 (uncharacterized protein LOC116403908 [Cucumis sativus])
HSP 1 Score: 281.6 bits (719), Expect = 5.1e-72
Identity = 143/160 (89.38%), Postives = 150/160 (93.75%), Query Frame = 0
Query: 14 MLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILED 73
M ILYPMLTPHNYTVWTIKAEAIL+AQGVWEAIEPARGAEVDVKKDKKARAYILQCI ED
Sbjct: 1 MSILYPMLTPHNYTVWTIKAEAILNAQGVWEAIEPARGAEVDVKKDKKARAYILQCIPED 60
Query: 74 VLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKETETIDEFAGKISG 133
VLLQ+AKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVL+MKE ETIDEF GKISG
Sbjct: 61 VLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETIDEFVGKISG 120
Query: 134 LGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK 174
L SKFTTL VALEDSSLV KL+DSVP+KYLPIV G+ F+
Sbjct: 121 LASKFTTLRVALEDSSLVNKLLDSVPDKYLPIVVGIKQFQ 160
BLAST of CSPI05G14840 vs. NCBI nr
Match:
XP_011658449.1 (uncharacterized protein LOC105436008 [Cucumis sativus])
HSP 1 Score: 275.4 bits (703), Expect = 3.6e-70
Identity = 142/173 (82.08%), Postives = 152/173 (87.86%), Query Frame = 0
Query: 1 MASISQQTKENGGMLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDK 60
MAS+SQQTKENG M I YPML PHNYT+WTIK EAILD Q VWEAIEP RG EVDVKKDK
Sbjct: 1 MASVSQQTKENGRMPIFYPMLCPHNYTMWTIKTEAILDTQEVWEAIEPIRGLEVDVKKDK 60
Query: 61 KARAYILQCILEDVLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKE 120
KA YILQCILEDVLLQ+AKKK+AKEIWD+LKTRYLGSERVKMARV LKSEFNVL+MKE
Sbjct: 61 KACVYILQCILEDVLLQIAKKKSAKEIWDNLKTRYLGSERVKMARVGILKSEFNVLRMKE 120
Query: 121 TETIDEFAGKISGLGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK 174
TETIDEFAGKIS L SKFTTL VALEDSSLVKKL+DSVP+KYL IV + F+
Sbjct: 121 TETIDEFAGKISKLASKFTTLGVALEDSSLVKKLLDSVPDKYLLIVTRIEQFQ 173
BLAST of CSPI05G14840 vs. NCBI nr
Match:
XP_031741709.1 (uncharacterized protein LOC116403904 [Cucumis sativus])
HSP 1 Score: 271.9 bits (694), Expect = 4.0e-69
Identity = 138/160 (86.25%), Postives = 148/160 (92.50%), Query Frame = 0
Query: 14 MLILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDKKARAYILQCILED 73
M ILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPA+GAEVDVKKDKK AYILQCI ED
Sbjct: 1 MTILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPAKGAEVDVKKDKKVHAYILQCIPED 60
Query: 74 VLLQVAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLQMKETETIDEFAGKISG 133
VLLQ+AKKKTAKEIWDSLKTRYLGSE+VKMARVQTLKSEFNVL+MKETET+DEF+GKISG
Sbjct: 61 VLLQIAKKKTAKEIWDSLKTRYLGSEQVKMARVQTLKSEFNVLRMKETETVDEFSGKISG 120
Query: 134 LGSKFTTLEVALEDSSLVKKLIDSVPEKYLPIVAGMSNFK 174
L SKFTTL VALEDSSLVKKL+D VP+KYL IV + F+
Sbjct: 121 LASKFTTLGVALEDSSLVKKLLDFVPDKYLLIVTEIEQFQ 160
BLAST of CSPI05G14840 vs. TAIR 10
Match:
AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 43.1 bits (100), Expect = 2.8e-04
Identity = 27/83 (32.53%), Postives = 39/83 (46.99%), Query Frame = 0
Query: 19 PMLTPHNYTVWTIKAEAILDAQGVWEAIEPA---------------RGAEVDVKKDKKAR 78
P+LT NY W+++ +AIL A VWE +E G K+DKKA
Sbjct: 11 PVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKAL 70
Query: 79 AYILQCILEDVLLQVAKKKTAKE 87
I Q + ED +V + +AK+
Sbjct: 71 CLIYQGLDEDTFEKVVEATSAKD 93
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SWG6 | 1.6e-52 | 82.09 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A251VAV7 | 4.2e-48 | 57.89 | Putative zinc finger, CCHC-type OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g00... | [more] |
A0A5N6NYJ8 | 7.2e-48 | 55.81 | CCHC-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_1635... | [more] |
A0A5N6M0G6 | 1.2e-47 | 56.98 | Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_34946 PE=4 SV=1 | [more] |
Q0JH75 | 1.6e-47 | 57.14 | Os01g0879800 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0879800 PE... | [more] |
Match Name | E-value | Identity | Description | |
AT1G48720.1 | 2.8e-04 | 32.53 | unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; B... | [more] |