CSPI05G14300 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G14300
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transposase
Location	Chr5: 14680360 .. 14680776 (-)
RNA-Seq Expression	CSPI05G14300
Synteny	CSPI05G14300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTACACTATCAGTAGATTGTTCTTCTTCAATGCAATTTGCACTAAAAAAATTTCTGTCTCACAGCTTGATGCATTGCAAGAAGATATAGTTATGACTTTGTACAATATTGAGAAGTACTTTCCACCATCATTTTTTACAATTATGGTTCATTTTGTCGTTCACCTCGTGAGAGAAGTAAAGCTTTGTGAACCTGTATATTTGAGGTGGATGTACCCATTTAAACAATGCATGAAACTCTTGAAAAGTTATGTTGGTAATAGAACTGGACCGGAAGGATGCATTGCAGAAGCACAAATATGTGAGGAGGCTGTTGAATTATGTTCAAAGTTTCTTTCTGGATTAGATCCTATTGGTTTTGGGTCACTCAATTCAATGGAAGACAGACATAGCGGTAGGCCACGGTCAGTATGA

mRNA sequence

ATGAAGTACACTATCAGTAGATTGTTCTTCTTCAATGCAATTTGCACTAAAAAAATTTCTGTCTCACAGCTTGATGCATTGCAAGAAGATATAGTTATGACTTTGTACAATATTGAGAAGTACTTTCCACCATCATTTTTTACAATTATGGTTCATTTTGTCGTTCACCTCGTGAGAGAAGTAAAGCTTTGTGAACCTGTATATTTGAGGTGGATGTACCCATTTAAACAATGCATGAAACTCTTGAAAAGTTATGTTGGTAATAGAACTGGACCGGAAGGATGCATTGCAGAAGCACAAATATGTGAGGAGGCTGTTGAATTATGTTCAAAGTTTCTTTCTGGATTAGATCCTATTGGTTTTGGGTCACTCAATTCAATGGAAGACAGACATAGCGGTAGGCCACGGTCAGTATGA

Coding sequence (CDS)

ATGAAGTACACTATCAGTAGATTGTTCTTCTTCAATGCAATTTGCACTAAAAAAATTTCTGTCTCACAGCTTGATGCATTGCAAGAAGATATAGTTATGACTTTGTACAATATTGAGAAGTACTTTCCACCATCATTTTTTACAATTATGGTTCATTTTGTCGTTCACCTCGTGAGAGAAGTAAAGCTTTGTGAACCTGTATATTTGAGGTGGATGTACCCATTTAAACAATGCATGAAACTCTTGAAAAGTTATGTTGGTAATAGAACTGGACCGGAAGGATGCATTGCAGAAGCACAAATATGTGAGGAGGCTGTTGAATTATGTTCAAAGTTTCTTTCTGGATTAGATCCTATTGGTTTTGGGTCACTCAATTCAATGGAAGACAGACATAGCGGTAGGCCACGGTCAGTATGA

Protein sequence

MKYTISRLFFFNAICTKKISVSQLDALQEDIVMTLYNIEKYFPPSFFTIMVHFVVHLVREVKLCEPVYLRWMYPFKQCMKLLKSYVGNRTGPEGCIAEAQICEEAVELCSKFLSGLDPIGFGSLNSMEDRHSGRPRSV*

Homology

[Close]

BLAST of CSPI05G14300 vs. ExPASy TrEMBL
Match: A0A5D3CAP5 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00350 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.4e-53
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MKYTISRL-FFFNAICTKKISVSQLDALQEDIVMTLYNIEKYFPPSFFTIMVHFVVHLVR 60
           ++YTISRL FFFNAIC K  SVS+LDALQEDIVMTL N+EKYFPPSFFTIMVH VVHLVR
Sbjct: 550 VRYTISRLCFFFNAICAKSFSVSELDALQEDIVMTLCNLEKYFPPSFFTIMVHLVVHLVR 609

Query: 61  EVKLCEPVYLRWMYPFKQCMKLLKSYVGNRTGPEGCIAEAQICEEAVELCSKFLSGLDPI 120
           EVKLC PVYLRWMYPF++ MK+LKS+V NR  PEGCIAEAQ+CEEAV  CS FLSGLD I
Sbjct: 610 EVKLCGPVYLRWMYPFERYMKVLKSFVRNRNRPEGCIAEAQVCEEAVHFCSDFLSGLDEI 669

Query: 121 GFGSLNSMEDRHSGRPRS 138
           G GSLNS E++   RP S
Sbjct: 670 GLGSLNSREEKQIDRPLS 687

[Close]

BLAST of CSPI05G14300 vs. ExPASy TrEMBL
Match: A0A5D3C1L1 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001880 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.4e-53
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MKYTISRL-FFFNAICTKKISVSQLDALQEDIVMTLYNIEKYFPPSFFTIMVHFVVHLVR 60
           ++YTISRL FFFNAIC K  SVS+LDALQEDIVMTL N+EKYFPPSFFTIMVH VVHLVR
Sbjct: 446 VRYTISRLCFFFNAICAKSFSVSELDALQEDIVMTLCNLEKYFPPSFFTIMVHLVVHLVR 505

Query: 61  EVKLCEPVYLRWMYPFKQCMKLLKSYVGNRTGPEGCIAEAQICEEAVELCSKFLSGLDPI 120
           EVKLC PVYLRWMYPF++ MK+LKS+V NR  PEGCIAEAQ+CEEAV  CS FLSGLD I
Sbjct: 506 EVKLCGPVYLRWMYPFERYMKVLKSFVRNRNRPEGCIAEAQVCEEAVHFCSDFLSGLDEI 565

Query: 121 GFGSLNSMEDRHSGRPRS 138
           G GSLNS E++   RP S
Sbjct: 566 GLGSLNSREEKQIDRPLS 583

[Close]

BLAST of CSPI05G14300 vs. ExPASy TrEMBL
Match: A0A5D3D5Q1 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00970 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.4e-53
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MKYTISRL-FFFNAICTKKISVSQLDALQEDIVMTLYNIEKYFPPSFFTIMVHFVVHLVR 60
           ++YTISRL FFFNAIC K  SVS+LDALQEDIVMTL N+EKYFPPSFFTIMVH VVHLVR
Sbjct: 550 VRYTISRLCFFFNAICAKSFSVSELDALQEDIVMTLCNLEKYFPPSFFTIMVHLVVHLVR 609

Query: 61  EVKLCEPVYLRWMYPFKQCMKLLKSYVGNRTGPEGCIAEAQICEEAVELCSKFLSGLDPI 120
           EVKLC PVYLRWMYPF++ MK+LKS+V NR  PEGCIAEAQ+CEEAV  CS FLSGLD I
Sbjct: 610 EVKLCGPVYLRWMYPFERYMKVLKSFVRNRNRPEGCIAEAQVCEEAVHFCSDFLSGLDEI 669

Query: 121 GFGSLNSMEDRHSGRPRS 138
           G GSLNS E++   RP S
Sbjct: 670 GLGSLNSREEKQIDRPLS 687

[Close]

BLAST of CSPI05G14300 vs. ExPASy TrEMBL
Match: A0A5D3BCR1 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00140 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.4e-53
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MKYTISRL-FFFNAICTKKISVSQLDALQEDIVMTLYNIEKYFPPSFFTIMVHFVVHLVR 60
           ++YTISRL FFFNAIC K  SVS+LDALQEDIVMTL N+EKYFPPSFFTIMVH VVHLVR
Sbjct: 446 VRYTISRLCFFFNAICAKSFSVSELDALQEDIVMTLCNLEKYFPPSFFTIMVHLVVHLVR 505

Query: 61  EVKLCEPVYLRWMYPFKQCMKLLKSYVGNRTGPEGCIAEAQICEEAVELCSKFLSGLDPI 120
           EVKLC PVYLRWMYPF++ MK+LKS+V NR  PEGCIAEAQ+CEEAV  CS FLSGLD I
Sbjct: 506 EVKLCGPVYLRWMYPFERYMKVLKSFVRNRNRPEGCIAEAQVCEEAVHFCSDFLSGLDEI 565

Query: 121 GFGSLNSMEDRHSGRPRS 138
           G GSLNS E++   RP S
Sbjct: 566 GLGSLNSREEKQIDRPLS 583

[Close]

BLAST of CSPI05G14300 vs. ExPASy TrEMBL
Match: A0A5D3D9W4 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00640 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.4e-53
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MKYTISRL-FFFNAICTKKISVSQLDALQEDIVMTLYNIEKYFPPSFFTIMVHFVVHLVR 60
           ++YTISRL FFFNAIC K  SVS+LDALQEDIVMTL N+EKYFPPSFFTIMVH VVHLVR
Sbjct: 550 VRYTISRLCFFFNAICAKSFSVSELDALQEDIVMTLCNLEKYFPPSFFTIMVHLVVHLVR 609

Query: 61  EVKLCEPVYLRWMYPFKQCMKLLKSYVGNRTGPEGCIAEAQICEEAVELCSKFLSGLDPI 120
           EVKLC PVYLRWMYPF++ MK+LKS+V NR  PEGCIAEAQ+CEEAV  CS FLSGLD I
Sbjct: 610 EVKLCGPVYLRWMYPFERYMKVLKSFVRNRNRPEGCIAEAQVCEEAVHFCSDFLSGLDEI 669

Query: 121 GFGSLNSMEDRHSGRPRS 138
           G GSLNS E++   RP S
Sbjct: 670 GLGSLNSREEKQIDRPLS 687

[Close]

BLAST of CSPI05G14300 vs. NCBI nr
Match: XP_031737567.1 (uncharacterized protein LOC116402458 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 4.6e-54
Identity = 109/139 (78.42%), Postives = 118/139 (84.89%), Query Frame = 0


Query: 1   MKYTISRL-FFFNAICTKKISVSQLDALQEDIVMTLYNIEKYFPPSFFTIMVHFVVHLVR 60
           ++YTISRL FFFNAIC K  SVS LDALQEDIV+TL N+EKYFPPSFFTIMVH VVHLVR
Sbjct: 656 VRYTISRLCFFFNAICAKSFSVSDLDALQEDIVLTLCNLEKYFPPSFFTIMVHLVVHLVR 715

Query: 61  EVKLCEPVYLRWMYPFKQCMKLLKSYVGNRTGPEGCIAEAQICEEAVELCSKFLSGLDPI 120
           EVKLC PVYLRWMYPF++CMK+LKSYV +R  PEGCIAEA ICEEAVE CS FLSGLDPI
Sbjct: 716 EVKLCGPVYLRWMYPFERCMKVLKSYVRSRARPEGCIAEASICEEAVEFCSDFLSGLDPI 775

Query: 121 GFGSLNSMEDRHSGRPRSV 139
           G GSLNS  +  S RP SV
Sbjct: 776 GLGSLNSRTEIQSDRPLSV 794

[Close]

BLAST of CSPI05G14300 vs. NCBI nr
Match: XP_031742160.1 (uncharacterized protein LOC116404092 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-53
Identity = 108/138 (78.26%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MKYTISRL-FFFNAICTKKISVSQLDALQEDIVMTLYNIEKYFPPSFFTIMVHFVVHLVR 60
           ++YTISRL FFFNAIC K  SVS LDALQEDIV+TL N+EKYFPPSFFTIMVH VVHLVR
Sbjct: 656 VRYTISRLCFFFNAICAKSFSVSDLDALQEDIVLTLCNLEKYFPPSFFTIMVHLVVHLVR 715

Query: 61  EVKLCEPVYLRWMYPFKQCMKLLKSYVGNRTGPEGCIAEAQICEEAVELCSKFLSGLDPI 120
           EVKLC PVYLRWMYPF++CMK+LKSYV +R  PEGCIAEA ICEEAVE CS FLSGLDPI
Sbjct: 716 EVKLCGPVYLRWMYPFERCMKVLKSYVRSRARPEGCIAEASICEEAVEFCSDFLSGLDPI 775

Query: 121 GFGSLNSMEDRHSGRPRS 138
           G GSLNS  +  S RP S
Sbjct: 776 GLGSLNSRTEIQSDRPLS 793

[Close]

BLAST of CSPI05G14300 vs. NCBI nr
Match: XP_031741700.1 (uncharacterized protein LOC116403896 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-53
Identity = 108/138 (78.26%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MKYTISRL-FFFNAICTKKISVSQLDALQEDIVMTLYNIEKYFPPSFFTIMVHFVVHLVR 60
           ++YTISRL FFFNAIC K  SVS LDALQEDIV+TL N+EKYFPPSFFTIMVH VVHLVR
Sbjct: 656 VRYTISRLCFFFNAICAKSFSVSDLDALQEDIVLTLCNLEKYFPPSFFTIMVHLVVHLVR 715

Query: 61  EVKLCEPVYLRWMYPFKQCMKLLKSYVGNRTGPEGCIAEAQICEEAVELCSKFLSGLDPI 120
           EVKLC PVYLRWMYPF++CMK+LKSYV +R  PEGCIAEA ICEEAVE CS FLSGLDPI
Sbjct: 716 EVKLCGPVYLRWMYPFERCMKVLKSYVRSRARPEGCIAEASICEEAVEFCSDFLSGLDPI 775

Query: 121 GFGSLNSMEDRHSGRPRS 138
           G GSLNS  +  S RP S
Sbjct: 776 GLGSLNSRTEIQSDRPLS 793

[Close]

BLAST of CSPI05G14300 vs. NCBI nr
Match: TYJ96008.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 1.9e-52
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MKYTISRL-FFFNAICTKKISVSQLDALQEDIVMTLYNIEKYFPPSFFTIMVHFVVHLVR 60
           ++YTISRL FFFNAIC K  SVS+LDALQEDIVMTL N+EKYFPPSFFTIMVH VVHLVR
Sbjct: 446 VRYTISRLCFFFNAICAKSFSVSELDALQEDIVMTLCNLEKYFPPSFFTIMVHLVVHLVR 505

Query: 61  EVKLCEPVYLRWMYPFKQCMKLLKSYVGNRTGPEGCIAEAQICEEAVELCSKFLSGLDPI 120
           EVKLC PVYLRWMYPF++ MK+LKS+V NR  PEGCIAEAQ+CEEAV  CS FLSGLD I
Sbjct: 506 EVKLCGPVYLRWMYPFERYMKVLKSFVRNRNRPEGCIAEAQVCEEAVHFCSDFLSGLDEI 565

Query: 121 GFGSLNSMEDRHSGRPRS 138
           G GSLNS E++   RP S
Sbjct: 566 GLGSLNSREEKQIDRPLS 583

[Close]

BLAST of CSPI05G14300 vs. NCBI nr
Match: TYK05707.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 1.9e-52
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MKYTISRL-FFFNAICTKKISVSQLDALQEDIVMTLYNIEKYFPPSFFTIMVHFVVHLVR 60
           ++YTISRL FFFNAIC K  SVS+LDALQEDIVMTL N+EKYFPPSFFTIMVH VVHLVR
Sbjct: 446 VRYTISRLCFFFNAICAKSFSVSELDALQEDIVMTLCNLEKYFPPSFFTIMVHLVVHLVR 505

Query: 61  EVKLCEPVYLRWMYPFKQCMKLLKSYVGNRTGPEGCIAEAQICEEAVELCSKFLSGLDPI 120
           EVKLC PVYLRWMYPF++ MK+LKS+V NR  PEGCIAEAQ+CEEAV  CS FLSGLD I
Sbjct: 506 EVKLCGPVYLRWMYPFERYMKVLKSFVRNRNRPEGCIAEAQVCEEAVHFCSDFLSGLDEI 565

Query: 121 GFGSLNSMEDRHSGRPRS 138
           G GSLNS E++   RP S
Sbjct: 566 GLGSLNSREEKQIDRPLS 583

The following BLAST results are available for this feature:

BLAST of CSPI05G14300 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G14300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CAP5	9.4e-53	76.81	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00350 PE...	[more]
A0A5D3C1L1	9.4e-53	76.81	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001880 PE...	[more]
A0A5D3D5Q1	9.4e-53	76.81	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00970 PE...	[more]
A0A5D3BCR1	9.4e-53	76.81	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00140 P...	[more]
A0A5D3D9W4	9.4e-53	76.81	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00640 PE...	[more]

BLAST of CSPI05G14300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737567.1	4.6e-54	78.42	uncharacterized protein LOC116402458 [Cucumis sativus]	[more]
XP_031742160.1	1.8e-53	78.26	uncharacterized protein LOC116404092 [Cucumis sativus]	[more]
XP_031741700.1	1.8e-53	78.26	uncharacterized protein LOC116403896 [Cucumis sativus]	[more]
TYJ96008.1	1.9e-52	76.81	transposase [Cucumis melo var. makuwa]	[more]
TYK05707.1	1.9e-52	76.81	transposase [Cucumis melo var. makuwa]	[more]

BLAST of CSPI05G14300 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025452	Domain of unknown function DUF4218	PFAM	PF13960	DUF4218	coord: 14..119 e-value: 1.4E-38 score: 131.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G14300.1	CSPI05G14300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity