CSPI05G13810 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G13810
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type E3 ubiquitin transferase
Location	Chr5: 13796683 .. 13802783 (+)
RNA-Seq Expression	CSPI05G13810
Synteny	CSPI05G13810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATCTAGAATGTTCTAAATTCGTCGAGAAAGTTCAAGAGCCAATTAAGATTTAGAGTGAAGACTCGAATTCCCATTTCTCAACGGCCAATGGAGTTAACCACCCCTGCATCGAATCCCCCGTTCTTTTCATCTCTTTGAATTTCTCTTTCGTAATTCCTCCTCTTCTCTCCGGATTTCATCGGTTGTTTCCAGGGGCCACCACCACCATGTCCTCCGCCGTCGACAAGCCTTTTTTCTGTCACCAGTGTGATCGCGCGGTTACTGTTTCTGTATCCATTTCCTCCGATCCTCTTTGCCCACTTTGCCACGAGGGTTTTCTCGAAGAGTACGACAATTCCAATTCCAATCTCAATTTTGATCCCACGTCCTTTTTCCTTCCCCAACCTTTCCGTCGTTTCAATCCGCTTGTTTTCTCCTCTTCTACAGTTGTTGATCTTCAAAACCCTGGTATATTTTCAAGAACTTTGGCTCCGCCTTCCCAATCCACTTCCTCTGTTCACCACGAGCCCTACGATCCTTTTGTTTTTCTTCAGAATCATTTACGGAGCATCTTCGAAAGTGGTGCCGATGTTGTCTTTGAAATTCCTCGCCATTCTTCCCACTCTGGTGTTCCAATGCCTCAAAATGTGGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTTATTCAGTTGCTGGCTGAAAATGATCCCAACCGATATGGAACTCCGCCGGCTTCGAAATCGGCAATTGAGAAGCTTTCGACTATCACTGTTACTGAGGACCTTCTGAATTCGCAAATGAATCAGTGTGCCGTTTGCATAGATGATTTTGGAAAAGGTATTGTGGTTAAGCAAATGCCCTGCAAGCATGTATTTCATGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCATGCCCTATTTGCCGGTTCGAGTTGCCTACGGATGATTCTGATTACGAGAATCGAACACGTGAAAACCGGATGCAGGGGAATGAATCTTCCGGGGAAGAATCAGGGTCAGGAAGCAGTGGGAGCAGCATGAGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCGTTTGGTAGCCGGAACGATGGGAGTGACAGTGAATGAGAAGATAGGCCTCAGAACAAACAAATACTGAATATGGTCTGGTAACTTTCATTCTCGTCTATTGTTTCTTTTTGTTTTAGCTTTTGCAAACTGCTTGCCATGCTGTTTTGCCCCCATGTCTTAGATTACTTTCATTGCATACATATGATTATTGAATATGATGCTGAGAGTCCCACACCCACATTGGAAAAACTAAGGAGATTCACACTCCATATCTCCATATTAGATAGATGGGTTATTTGAAATGTCCAAGATAGGTGAACCCAAAGAGTCACCATCTTGAGGAGCATGAAACACTGGTAACTTGTTTGTGAAATGGCTAGCCCCTAAAGAAAAGGTAGAAGGACTAAAAGGAAACATAGGGGAAGAGACGGGAAGAAAATACAATAAGGATTGACAATTGATTCTTTTTTAAGTAATTGTTCAGACAATAACTTTATTTCATGTAAACTCAGTGAGAACAGTTTAAACAATAAATATATAAATATATTGAGTAATATTAAATATATCTCTAGTATGTTTCGATCTCCAGCCTACGTAAAGGGATATCTAATGTTTTTGGTTGTTTGACATGGGATCTTCAATCCTCCAGGGGGAATGGCGAAATAAATGGTTTGTTGTGTTCAGTTTATTAATTTGTAGAAAATGGAAACCTAGTATTATGGTTAGGATGATGGTGCGGCTGTCATTGGTACTAATGGGATTAAATAGTTGATGATCCTGTGGACATCCATCGTAGTAAGAGGAAGAGCTTGCAATCTCTACAGCCACCTCTCTTTTTTATAGGCAACATGAAATTTCGTTGATGATACTCTGAAGAATCAATGGGACGAAGGATCTTCTGAAGATGATTGTAACAAATTTCTTCTTTGGAGTCTTTTTTAAAAGCTTCCTTCTTGATGTTATAAACACAAAAAATTGTTATAGTTATAGTCTTTTGATGATTATAATGACTTGAAGGGCATTCTTTTGTTTGTCCTATAAATAAGAAACTTGACTGTATTGAAGGAGGGGAAAAGAAGACAATACCACTTAAAATGACATCCCTCTCCCAAAGAATGCTAACTGCCGAAAATTCTTCCAATTGCCAGAATCAACAATATTGGATAGCGACCAGAGAATCTGTGGCTTCTCTTGAAGGGGCTTTTCTCTACTGTCGGATTTTTTATTGTTTCATACCAATAAAACAAAAGAAAGTTAGGAAAGGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGCTAGGGTGAGGATCTATCACTAAAGGACCCTTTAGAATCTGATTTAAATGCCCTCTTCCAGATCAAGGAAGTTGTAAATTTTGAAAAGCAGGTCCCTAGAATTCCCTCTCAATCATAGCACTGTGAAGTTCTAGAGCATTTGAAGTCTTTTGTTGAAGAATGTGGAATAACTTTGGGTTGAGTTCTTGAAAGTAGATTTGTTCTCTGCTTCATCAATCAATTATCTCTGAATTTTGAATAGTGGATCACGAGGTTTTTGATGGATACTTCAATAGTTTTGCCATCTACAGCTTCTTGGTCAACCTAATACAGATTTAGTCATTCTTTCAAGTTTTAAAGGTACTTTAGGAGCCACGTTGAACCAAGGTGCTTGTTCAGCCCAGCTCCTCTTTATTTCAGAAGTTGTTTTTGGCAGTTCGGAGCTTTGGTTGTTTGTTTCATCATTTCTTGGCAGGCACGAGAACGGTTTCCTCTTGAAAAGGAATTTAAAGTTATTTTGCAGTTTGTTGGGTTGAAAGTTGTTAGCAAGTCTTCTCGGGCTCAAGATTGTTTCTTGCCTTTCCTTTGTGTTTCCTCTCCATTCCTCTTGAAGATATTACTGTGCAAGTCTTCCCTTTTCTTGGTTTTTCCTCTCCATTCATCTTGAAGCTATTGCTGTGCAAGTTTTCCGCTGAATTTGGGTTTCTTACTGAAAAACACTATTTTGTTCAAGTGCATAAGCTATATATGATTTTTTTTTACTTAGATATGAAGAAAACATTTTCTCAATAGCTTTACGAGTAGCATGTGGCTTTAAAAATACACGTACCTTTTAAATAGATTTTGTGTCTATTTCGAGTTTCTATGGTATATCTATCCAAGTTTTCTTCTAGAAGTTGCTGGCGACTGAGCAGATCTGCAAGAATGAAGGAGGCCTTTCTCTGTCCATGTTTGGTATTCCTGACTACAATTTCTTAACATTTATAGGGTGTAAGAAGGTTGATTTGGGTCAATTCCATAGAACCTTAGTTATTTACCTATACTTGGGGAGAGGAAGAGGTGAATGTAAATGTGGAATGCTGTGTAGGGACATGCAACAGTTATGGTGTGGGATTTAGCAAATAAGTGAGTTTTATCTATGTATATGCTGGCCGTGTAGCGAGGCATTTTTCTGGTTAGGATATGATCAGGGTCTGCAAATCATTGCTAGACCCAAAAGCTAAGTCTTAGTTGGGGTAAAGCTAAGCTGATGAGTTATGATAAACTTAATTTTATCAATGCTTTTGACTCATTCCTCGATTTGTGGATGCGAAAATTTGTAGAAGGTTAATTGGCCAACAAGAGTACATCAATATAAACTAGATGAGGAATGGTGTTTAGGCCTCAAACAAAATTAAATAGATGGATTGCGCTAAATTTAATTATATCAACATTTATCAAATTCTCCTATGATCTTGTAATTCTCTGCCACGGATAAGAATTGTTGTATGTCAGATTGTTTCCTATCAAACTTTCCTTTGTCATCAATAAAGTTAGCAATATCACATTTTTAGATCTGCTCTAGATGAAACAAACAAAGAGGATACTTCAAACTAACTAAAATGAAATGATATGATCAGTTTATGGAGTTATTGGATTTTTATTTATCTTATTCCTTACGTTTTAGTTTCAACTTGCACTCACACCCAATTCCCAATCTCAAGTGGGGCGTTTGGGCCTTATAGTTATGGCCAGTTCACTTTTGAAAGAAAAAAATATTTTCTTGGGGGACATTTATGTGTTTTTTACCCTAAACCTTAAAGAAAAGAAAAATAAAATGAAACAAATCATTTATGTACTTGGCTCACACTTGAGGTGATTTATGTACGTTTGGGCTAATACTCTCCTTGGAGCAGTAATCGACCATTCATCTACTATTTATGTTCACTCAACTTTTGAAGTGATTTAATTGACCTATGGATCTGAATATATAAATCCTTGAGAGAAGGAGATAAAGGATAGGATTATGCTAGTATTATATGAGGTTCCACTTTATTACCTTTGAACTACTTTCCTTGATCAAACTCCAAAAAGCATGGACAAGAAGGGCATACCCTTTACAGGTCACATTTTATTTCTTTAAAACTAAGATGATATTTATTATTAATTATGCCGTGGACATTTAGAACACATCATGAAAAAGAGATGGGTTGTTGTTAATATATGTCTAGATACTAGTATCGTGACTGAAATTTTGATGACCGTCCAAAATAGAAATTTCTAGGGTAGTTAATCTTTAAGGAAAGAAAGTTTTTTTTTTATTATTATTATTTTTTACTTTTTTTTGGGAATGATCTTTAAGGGAAGGAAATTAAAAAATTATTTATGTTAAACCCTTTATTATGAACAGATGAAGCTAAGATTTTGGCCCATGTATCCAGAATAAAAAAAATTGTGCTTTAAAACTAAAAAATCTCGATGTCCAATATATATCTGTTGTACATGTACTATCCAGACATGTGCAATGCATACATAATTGGGAGATTGTGCTGCGTTTTGGACTAATTTGTGTATATATTTCTTGGACATGCATCAATCATTTCCTTTTTTATTTGACAATTTTGGATATGAAAAACCTTCTTAACATGAAGGTGATATGATTTTTTTTACCCTCCCTTGAGGGTTAATGGGCGACAGATTCGGGTTCTAAATGCATCCATTATTAATTATTAGTTGTATATCCTGAAGTGTGTATCCAAGAGTGTATTAGAAGACATTTGACACATAGGTTAGGTTTATGTAACTTAAGGTTCAGAGCTTCTGTACTTGTATCTGTATTTGGTATATAACACTTGCCATATTTCTATGTTTTAGTCATACAAGCCTTATGAAATGCACCTTTTACATTGTAGAATAATTGAACTGTAGTGATAGGACTTGAGATTTTCCCCATGGGGAAAGATGTATATAAACTTGTTCTAGATTACAGATTTTGAGATGAATAGTTATATTCTAATACGACTCTATAATGATTGAAATTTAGATTTTCTTTAGGTAATCTCTATACCTCGGTCCTCGATTGAGATGTACATTAGGCTTTTGAAAAGCATCTTTTAATCTTCATCTTCTTAATTTTGCTTTGTACTGTTGTCAACAATCATGCATGGCTTTAGGTTTATTGTGTGGAGGTTATACATAAATGATATGAACACTCAGCTCGGTAGCCATGATTGGCATTGTAATGCAATATGAAGGGCCAATGTAAATCCTTACCATAGCTTAAATTTTGTTTTTCAGGCAAACGGAGCACTGTTTTGACCTTAAGGTTGTCTCACATTTTTAGAAGAAATTTCTGCTGTAATACCTTTGCAAAGTCGGTGTCTTTTGGTAGCCTTTCGTTTGTTAGTTATTCATTTTTTTTCCTTTCACATTAGAATTTTGTTTCACATGCCAACATCAATTATGTACAGATGTGTTCATTTTGAGTGTCATTTCTTCTTTCAATGTAGAATGTAATACATTCCAAATCATCTCTTGTTCATAGCTGCTACGAAAGGCTGCTTCTTCTTTTCAAATTTGTGTCTATTGGTGGTTATTAGGGAGTATGCAAATTTTCGTATGTAGTAGCGTGGTTTAAATTTGTATATAAACAAAACATATTTGTTAAATATCTCTTTAGGATGGAGGGTG

mRNA sequence

AAAAATCTAGAATGTTCTAAATTCGTCGAGAAAGTTCAAGAGCCAATTAAGATTTAGAGTGAAGACTCGAATTCCCATTTCTCAACGGCCAATGGAGTTAACCACCCCTGCATCGAATCCCCCGTTCTTTTCATCTCTTTGAATTTCTCTTTCGTAATTCCTCCTCTTCTCTCCGGATTTCATCGGTTGTTTCCAGGGGCCACCACCACCATGTCCTCCGCCGTCGACAAGCCTTTTTTCTGTCACCAGTGTGATCGCGCGGTTACTGTTTCTGTATCCATTTCCTCCGATCCTCTTTGCCCACTTTGCCACGAGGGTTTTCTCGAAGAGTACGACAATTCCAATTCCAATCTCAATTTTGATCCCACGTCCTTTTTCCTTCCCCAACCTTTCCGTCGTTTCAATCCGCTTGTTTTCTCCTCTTCTACAGTTGTTGATCTTCAAAACCCTGGTATATTTTCAAGAACTTTGGCTCCGCCTTCCCAATCCACTTCCTCTGTTCACCACGAGCCCTACGATCCTTTTGTTTTTCTTCAGAATCATTTACGGAGCATCTTCGAAAGTGGTGCCGATGTTGTCTTTGAAATTCCTCGCCATTCTTCCCACTCTGGTGTTCCAATGCCTCAAAATGTGGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTTATTCAGTTGCTGGCTGAAAATGATCCCAACCGATATGGAACTCCGCCGGCTTCGAAATCGGCAATTGAGAAGCTTTCGACTATCACTGTTACTGAGGACCTTCTGAATTCGCAAATGAATCAGTGTGCCGTTTGCATAGATGATTTTGGAAAAGGTATTGTGGTTAAGCAAATGCCCTGCAAGCATGTATTTCATGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCATGCCCTATTTGCCGGTTCGAGTTGCCTACGGATGATTCTGATTACGAGAATCGAACACGTGAAAACCGGATGCAGGGGAATGAATCTTCCGGGGAAGAATCAGGGTCAGGAAGCAGTGGGAGCAGCATGAGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCGTTTGGTAGCCGGAACGATGGGAGTGACAGTGAATGAGAAGATAGGCCTCAGAACAAACAAATACTGAATATGGCAAACGGAGCACTGTTTTGACCTTAAGGTTGTCTCACATTTTTAGAAGAAATTTCTGCTGTAATACCTTTGCAAAGTCGGTGTCTTTTGGTAGCCTTTCGTTTGTTAGTTATTCATTTTTTTTCCTTTCACATTAGAATTTTGTTTCACATGCCAACATCAATTATGTACAGATGTGTTCATTTTGAGTGTCATTTCTTCTTTCAATGTAGAATGTAATACATTCCAAATCATCTCTTGTTCATAGCTGCTACGAAAGGCTGCTTCTTCTTTTCAAATTTGTGTCTATTGGTGGTTATTAGGGAGTATGCAAATTTTCGTATGTAGTAGCGTGGTTTAAATTTGTATATAAACAAAACATATTTGTTAAATATCTCTTTAGGATGGAGGGTG

Coding sequence (CDS)

ATGTCCTCCGCCGTCGACAAGCCTTTTTTCTGTCACCAGTGTGATCGCGCGGTTACTGTTTCTGTATCCATTTCCTCCGATCCTCTTTGCCCACTTTGCCACGAGGGTTTTCTCGAAGAGTACGACAATTCCAATTCCAATCTCAATTTTGATCCCACGTCCTTTTTCCTTCCCCAACCTTTCCGTCGTTTCAATCCGCTTGTTTTCTCCTCTTCTACAGTTGTTGATCTTCAAAACCCTGGTATATTTTCAAGAACTTTGGCTCCGCCTTCCCAATCCACTTCCTCTGTTCACCACGAGCCCTACGATCCTTTTGTTTTTCTTCAGAATCATTTACGGAGCATCTTCGAAAGTGGTGCCGATGTTGTCTTTGAAATTCCTCGCCATTCTTCCCACTCTGGTGTTCCAATGCCTCAAAATGTGGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTTATTCAGTTGCTGGCTGAAAATGATCCCAACCGATATGGAACTCCGCCGGCTTCGAAATCGGCAATTGAGAAGCTTTCGACTATCACTGTTACTGAGGACCTTCTGAATTCGCAAATGAATCAGTGTGCCGTTTGCATAGATGATTTTGGAAAAGGTATTGTGGTTAAGCAAATGCCCTGCAAGCATGTATTTCATGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCATGCCCTATTTGCCGGTTCGAGTTGCCTACGGATGATTCTGATTACGAGAATCGAACACGTGAAAACCGGATGCAGGGGAATGAATCTTCCGGGGAAGAATCAGGGTCAGGAAGCAGTGGGAGCAGCATGAGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCGTTTGGTAGCCGGAACGATGGGAGTGACAGTGAATGA

Protein sequence

MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE*

Homology

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BLAST of CSPI05G13810 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 8.4e-88
Identity = 166/303 (54.79%), Postives = 206/303 (67.99%), Query Frame = 0


Query: 5   VDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD--NSNSNLNFDPTS----FFLP 64
           VDK FFC+QC++ VT+S+S S+DP CP+C++GFLEEY+  N N +LNF+P S    F + 
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMA 76

Query: 65  QPFRRFNPLVFSSSTVV--DLQNPGIFSRTLAPPSQST-SSVHHEPYDPFVFLQNHLRSI 124
            PF    PL+F SS      +    +F  ++ P ++ST  +   + +DPF FLQNHL+++
Sbjct: 77  DPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTL 136

Query: 125 FESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAI 184
             SG    F I  H S  G  MP N GDYF GPGLEQLIQ LAENDPNRYGTPPASKSAI
Sbjct: 137 RSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI 196

Query: 185 EKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPIC 244
           + L T+ VT+D+L S+MNQCAVC+D+F  G  VKQMPCKHVFH  CLLPWLELHNSCP+C
Sbjct: 197 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 256

Query: 245 RFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDG 299
           RFELPTDD DYENR+     QG++ SG+  GS     +      RF + L WPF  R DG
Sbjct: 257 RFELPTDDPDYENRS-----QGSQGSGDGQGSVEGQQT-----PRFSIQLPWPF-RRQDG 308

[Close]

BLAST of CSPI05G13810 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.7e-85
Identity = 166/313 (53.04%), Postives = 200/313 (63.90%), Query Frame = 0


Query: 6   DKPFFCHQCDRAVTVSVS-ISSDPLCPLCHEGFLEEYDNSNSN-----LNFDPTS----- 65
           +KPFFC+QC+R V V++S  SSDP CP+C+EGFLEEYDN N N     LN +P S     
Sbjct: 20  NKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHD 79

Query: 66  --FFLPQPFRRFNPLVF--------SSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEP--Y 125
               L  PF    PL+F        SSS  +D  NP +        S  T S   +P  +
Sbjct: 80  LFLTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSL--------SGPTRSGRGDPFAF 139

Query: 126 DPFVFLQNHLRSIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDP 185
           DPF F+QNHL  +  SGA + F I  + S  G  +P N+GDYFIGPGLEQLIQ LAENDP
Sbjct: 140 DPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDP 199

Query: 186 NRYGTPPASKSAIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCL 245
           NRYGTPPASKSAIE L  + +T+  LNS+ NQCAVC+DDF +G   KQMPCKH++H  CL
Sbjct: 200 NRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCL 259

Query: 246 LPWLELHNSCPICRFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFR 296
           LPWLELHNSCP+CR ELPTDD DYE R R  +     + G+ SG  S G + R VER FR
Sbjct: 260 LPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDN-RTVERSFR 319

[Close]

BLAST of CSPI05G13810 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.5e-33
Identity = 101/302 (33.44%), Postives = 142/302 (47.02%), Query Frame = 0


Query: 10  FCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQPFRRFNPLVF 69
           +CH+C RAV +      +P+C  C  GF+EE D + ++  FD         FR    +V 
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQAS-PFD--------MFRSHRGVVE 68

Query: 70  SSSTVVDLQNPGIFSRT-LAPPSQ---------STSSVHHEPYDPFVFLQNHLRSIFESG 129
              T   +    +F R  LA  S          S+   +     P +     +   +   
Sbjct: 69  RDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP--YRLT 128

Query: 130 ADVVFEIPRHSSHSGVPMPQ-NVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKL 189
            D   E   +    G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L
Sbjct: 129 GDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDAL 188

Query: 190 STITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFE 249
            TI + +  L S  + C VC D+F  G   KQMPC H++H  C++PWL  HNSCP+CR E
Sbjct: 189 PTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQE 248

Query: 250 LP--TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 299
           LP  +  S  +NRT   R   + SS   S S  +G+     ERR     +WPF S    S
Sbjct: 249 LPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSGSSS 290

[Close]

BLAST of CSPI05G13810 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-32
Identity = 96/300 (32.00%), Postives = 141/300 (47.00%), Query Frame = 0


Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD----NSNSNLNFDPTSFFLP 62
           S++    +CH+C RAV +    + D +C  C  GF+EE D     ++ ++  DPT F L 
Sbjct: 2   SSIRNTHWCHRCQRAVWLR---ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPT-FDLM 61

Query: 63  QPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFL--QNHLRSIF 122
           + F       F  S + +      + R ++    S  S       P +    Q   R   
Sbjct: 62  EAFS-----AFMRSRLAERS----YDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAG 121

Query: 123 ESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIE 182
              + V   +   +   G+    N GDYF GPGLE+LI+ L+    +R G PPA KS+I+
Sbjct: 122 GDNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSID 181

Query: 183 KLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICR 242
            L TI +T+  L S  + C VC D+F      KQMPC H++H  C++PWL  HNSCP+CR
Sbjct: 182 ALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCR 241

Query: 243 FELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 297
            ELP+  S    ++ +NR          S +G   S  R +         WPF S +  S
Sbjct: 242 KELPSRGSSSSTQSSQNR----------STNGRENSRRRNIFSNL-----WPFRSSSSSS 272

[Close]

BLAST of CSPI05G13810 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-30
Identity = 90/302 (29.80%), Postives = 145/302 (48.01%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60
           M+ A    ++CH+C++A  +  ++  +  CP C  GF+EE  +       +  +   P+P
Sbjct: 1   MAEAAITRYWCHECEQA--IEEAMVDEIKCPSCGGGFVEEMTDE----EIERLTNRQPEP 60

Query: 61  -FRRFNPLVFSSSTV--------VDLQNPGIFSR----------------TLAPPSQSTS 120
            F ++NP+     T+        +  +  G   R                 LA   +  S
Sbjct: 61  GFSQWNPIEHPGETMDSDDEDNDLGREFEGFIRRHRRASTLRRVLDSIHDDLADDQERDS 120

Query: 121 SVHHEPYDPFVFLQNHLRSIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQ 180
           S+    ++  + LQ  +    E   D        ++  G+     + +Y +G GL  L+Q
Sbjct: 121 SILINAFNQALALQGSVLDPDEGQGDQ----GGSTNDDGL-----LEEYVLGAGLSLLLQ 180

Query: 181 LLAENDPNRYGTPPASKSAIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKH 240
            LAE+DP+R GTPPA K A+E L T+ + E      +  C+VC+DD   G   KQMPC+H
Sbjct: 181 HLAESDPSRNGTPPAKKEAVEALPTVKIEE------VVSCSVCLDDLEVGSQAKQMPCEH 240

Query: 241 VFHDYCLLPWLELHNSCPICRFELPTDDS-DYENRTRENRMQGNESSGEESGSGSSGSSM 277
            FH  C+LPWLELH+SCP+CRFELP++++ D    +   R++ +       G G+   S 
Sbjct: 241 KFHSSCILPWLELHSSCPVCRFELPSEETKDLNEPSNIGRVEDSHEEVRADGPGNVSESS 281

[Close]

BLAST of CSPI05G13810 vs. ExPASy TrEMBL
Match: A0A0A0KT93 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G350590 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 5.5e-175
Identity = 297/299 (99.33%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60
           MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60

Query: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120
           FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA
Sbjct: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120

Query: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180
           DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST
Sbjct: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180

Query: 181 ITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240
           ITVTEDLLNS+MNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP
Sbjct: 181 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240

Query: 241 TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE 300
           TDDSDYENRTR NRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE
Sbjct: 241 TDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE 299

[Close]

BLAST of CSPI05G13810 vs. ExPASy TrEMBL
Match: A0A5A7UNL2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00740 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.4e-157
Identity = 273/300 (91.00%), Postives = 280/300 (93.33%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEY--DNSNSNLNFDPTSFFLP 60
           MSSAVDKPFFCHQCDRA+TVSVSISSDP CPLCHEGFL+EY   NSNSNLN D  SFFLP
Sbjct: 1   MSSAVDKPFFCHQCDRAITVSVSISSDPFCPLCHEGFLKEYGNSNSNSNLNLDLRSFFLP 60

Query: 61  QPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFES 120
           QPFRRFNPLVFSSSTVVDLQNPGIFSRTLA P QS+SSVH EPYDPFVFLQNHLRSIFES
Sbjct: 61  QPFRRFNPLVFSSSTVVDLQNPGIFSRTLASPPQSSSSVHPEPYDPFVFLQNHLRSIFES 120

Query: 121 GADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKL 180
            ADVVFEIPRHS HSGVPMPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIEKL
Sbjct: 121 DADVVFEIPRHSFHSGVPMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL 180

Query: 181 STITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFE 240
           STITVTEDLLNS+MNQCA+CIDDF KGI VKQMPCKHVFHDYCLLPWLELHNSC +CRFE
Sbjct: 181 STITVTEDLLNSEMNQCAICIDDFEKGIEVKQMPCKHVFHDYCLLPWLELHNSCLVCRFE 240

Query: 241 LPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDS 299
           LPTDDSDYENRT  NRMQGNESSGEESGS S GSS RRVERRFRVPLWWPFGSRNDGSDS
Sbjct: 241 LPTDDSDYENRTCGNRMQGNESSGEESGSESGGSSTRRVERRFRVPLWWPFGSRNDGSDS 300

[Close]

BLAST of CSPI05G13810 vs. ExPASy TrEMBL
Match: A0A6J1FJU6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111444684 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.5e-143
Identity = 246/298 (82.55%), Postives = 266/298 (89.26%), Query Frame = 0


Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD--NSNSNLNFDPTSFFLPQP 62
           +AVDKPFFCHQCDRAVTV VS+SSDPLCP C+EGFLEEY+  NSNSN+N D  +  LP P
Sbjct: 8   AAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGTLLLPDP 67

Query: 63  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 122
           FR FNPLV SSSTVVDLQNPG+FSRTL+  SQS SSV  EPYDPFVFLQNHLR IF+SGA
Sbjct: 68  FRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDSGA 127

Query: 123 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 182
           DVVFEIPRH+SHSG  MPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIEKL T
Sbjct: 128 DVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLPT 187

Query: 183 ITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 242
           +TVTEDLLNS+MNQCAVCID F K   VKQMPCKHVFHDYC+LPWLELHNSCP+CRFELP
Sbjct: 188 VTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCPVCRFELP 247

Query: 243 TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDS 299
           TDDSDYENRTR +++Q NESSGEESGSG+ GS+  RVERRFRVPLWWPFG RNDGSDS
Sbjct: 248 TDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRNDGSDS 305

[Close]

BLAST of CSPI05G13810 vs. ExPASy TrEMBL
Match: A0A6J1K1C4 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111489246 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.4e-140
Identity = 241/298 (80.87%), Postives = 262/298 (87.92%), Query Frame = 0


Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD--NSNSNLNFDPTSFFLPQP 62
           +AVDKPFFCHQCDRAVTV +S SSDPLCP C+EGFLEEY+  NSNSN+N D  +  LP P
Sbjct: 8   AAVDKPFFCHQCDRAVTVILSPSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGTLLLPDP 67

Query: 63  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 122
           FR FNPLV SSSTVVDLQNPG+FSRTL+  SQS SSV  E YDPFVFLQNHLR IF+SGA
Sbjct: 68  FRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEQYDPFVFLQNHLRGIFDSGA 127

Query: 123 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 182
           DVVFEIPRH+SHSG  MPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKS IEKL  
Sbjct: 128 DVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSVIEKLPN 187

Query: 183 ITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 242
           +TVTEDLLNS+MNQCAVCID F K   VKQMPCKHVFHDYC+LPWLELHNSCP+CRFELP
Sbjct: 188 VTVTEDLLNSEMNQCAVCIDGFEKDTEVKQMPCKHVFHDYCILPWLELHNSCPVCRFELP 247

Query: 243 TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDS 299
           TDDSDYENRTR +++Q NESSGEESGSG+ GS+  RVERRFRVPLWWPFG RNDG+DS
Sbjct: 248 TDDSDYENRTRGSQVQANESSGEESGSGNRGSNRGRVERRFRVPLWWPFGGRNDGNDS 305

[Close]

BLAST of CSPI05G13810 vs. ExPASy TrEMBL
Match: A0A6J1H9Y0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461423 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.9e-136
Identity = 237/303 (78.22%), Postives = 257/303 (84.82%), Query Frame = 0


Query: 2   SSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQPF 61
           S+AVDK FFCHQCDR VTV+VS S +PLCP C+EGFLEEYD  +SN N D  SFFLP PF
Sbjct: 3   SAAVDKSFFCHQCDRDVTVAVSNSLEPLCPFCNEGFLEEYDTFSSNANLDSRSFFLPDPF 62

Query: 62  RRFNPLVFSSSTVVDLQNPGIFSRTLAPPS------QSTSSVHHEPYDPFVFLQNHLRSI 121
           R FNPL FSSSTVVDLQNPG+FSRTL+P S      QS SS   EP+DPFVFLQNHLR I
Sbjct: 63  RDFNPLAFSSSTVVDLQNPGLFSRTLSPASQLWNRHQSDSSGQPEPFDPFVFLQNHLRGI 122

Query: 122 FESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAI 181
           F+SGADVVFEI  H S SGV MPQN+GDYFIGPGLEQLIQLLAENDPNR+GTPPASKSAI
Sbjct: 123 FDSGADVVFEIQGHPSRSGVSMPQNLGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSAI 182

Query: 182 EKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPIC 241
           EKL  +TVTE+LLNS+MNQCAVC+D F KGI VKQMPCKH+FHDYCLLPWLELHNSCP+C
Sbjct: 183 EKLQNVTVTEELLNSEMNQCAVCLDGFEKGIEVKQMPCKHIFHDYCLLPWLELHNSCPVC 242

Query: 242 RFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDG 299
           RFEL TDDSDYENRTR  R+Q NES+GEE GSG+SGSS  RVER FRVPLWWPFG RNDG
Sbjct: 243 RFELATDDSDYENRTRGRRVQANESNGEEPGSGNSGSSSERVERSFRVPLWWPFGGRNDG 302

[Close]

BLAST of CSPI05G13810 vs. NCBI nr
Match: XP_004149872.1 (E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_011655156.1 E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_031741982.1 E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >KGN50936.1 hypothetical protein Csa_023085 [Cucumis sativus])

HSP 1 Score: 623.2 bits (1606), Expect = 1.1e-174
Identity = 297/299 (99.33%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60
           MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60

Query: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120
           FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA
Sbjct: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120

Query: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180
           DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST
Sbjct: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180

Query: 181 ITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240
           ITVTEDLLNS+MNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP
Sbjct: 181 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240

Query: 241 TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE 300
           TDDSDYENRTR NRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE
Sbjct: 241 TDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE 299

[Close]

BLAST of CSPI05G13810 vs. NCBI nr
Match: KAA0055876.1 (E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK24099.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 565.5 bits (1456), Expect = 2.8e-157
Identity = 273/300 (91.00%), Postives = 280/300 (93.33%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEY--DNSNSNLNFDPTSFFLP 60
           MSSAVDKPFFCHQCDRA+TVSVSISSDP CPLCHEGFL+EY   NSNSNLN D  SFFLP
Sbjct: 1   MSSAVDKPFFCHQCDRAITVSVSISSDPFCPLCHEGFLKEYGNSNSNSNLNLDLRSFFLP 60

Query: 61  QPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFES 120
           QPFRRFNPLVFSSSTVVDLQNPGIFSRTLA P QS+SSVH EPYDPFVFLQNHLRSIFES
Sbjct: 61  QPFRRFNPLVFSSSTVVDLQNPGIFSRTLASPPQSSSSVHPEPYDPFVFLQNHLRSIFES 120

Query: 121 GADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKL 180
            ADVVFEIPRHS HSGVPMPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIEKL
Sbjct: 121 DADVVFEIPRHSFHSGVPMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKL 180

Query: 181 STITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFE 240
           STITVTEDLLNS+MNQCA+CIDDF KGI VKQMPCKHVFHDYCLLPWLELHNSC +CRFE
Sbjct: 181 STITVTEDLLNSEMNQCAICIDDFEKGIEVKQMPCKHVFHDYCLLPWLELHNSCLVCRFE 240

Query: 241 LPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDS 299
           LPTDDSDYENRT  NRMQGNESSGEESGS S GSS RRVERRFRVPLWWPFGSRNDGSDS
Sbjct: 241 LPTDDSDYENRTCGNRMQGNESSGEESGSESGGSSTRRVERRFRVPLWWPFGSRNDGSDS 300

[Close]

BLAST of CSPI05G13810 vs. NCBI nr
Match: XP_038907201.1 (E3 ubiquitin-protein ligase RING1-like [Benincasa hispida])

HSP 1 Score: 547.7 bits (1410), Expect = 6.1e-152
Identity = 262/303 (86.47%), Postives = 279/303 (92.08%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD----NSNSNLNFDPTSFF 60
           MS+ VDKPFFCHQCDRAVTVSVSISSDPLCP CHEGFLEEYD    NSNSN+N DP SFF
Sbjct: 1   MSAVVDKPFFCHQCDRAVTVSVSISSDPLCPFCHEGFLEEYDHSNPNSNSNVNLDPRSFF 60

Query: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLA-PPSQSTSSVHHEPYDPFVFLQNHLRSI 120
           LP PFRRF+PLVFSSSTVVDLQNP +FSRTL  PP+QS+SSVH E YDPFVFLQNHLR +
Sbjct: 61  LPHPFRRFSPLVFSSSTVVDLQNPSLFSRTLTPPPTQSSSSVHPE-YDPFVFLQNHLRGL 120

Query: 121 FESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAI 180
           FESGADVVFEIPRHSSHSGV MPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAI
Sbjct: 121 FESGADVVFEIPRHSSHSGVSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAI 180

Query: 181 EKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPIC 240
           EKL T+TVTEDLLNS+MNQCAVCID+F KGI VKQMPCKHVFHDYC+LPWLELHNSCP+C
Sbjct: 181 EKLPTVTVTEDLLNSEMNQCAVCIDEFEKGIKVKQMPCKHVFHDYCILPWLELHNSCPVC 240

Query: 241 RFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDG 299
           RFELPTDD+DYENRTR NR+Q NESSGEESGSG+SG+S  RVERRFRVPLWWPFG RNDG
Sbjct: 241 RFELPTDDADYENRTRGNRVQANESSGEESGSGNSGNSTGRVERRFRVPLWWPFGGRNDG 300

[Close]

BLAST of CSPI05G13810 vs. NCBI nr
Match: XP_022938450.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 518.1 bits (1333), Expect = 5.1e-143
Identity = 246/298 (82.55%), Postives = 266/298 (89.26%), Query Frame = 0


Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD--NSNSNLNFDPTSFFLPQP 62
           +AVDKPFFCHQCDRAVTV VS+SSDPLCP C+EGFLEEY+  NSNSN+N D  +  LP P
Sbjct: 8   AAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGTLLLPDP 67

Query: 63  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 122
           FR FNPLV SSSTVVDLQNPG+FSRTL+  SQS SSV  EPYDPFVFLQNHLR IF+SGA
Sbjct: 68  FRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDSGA 127

Query: 123 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 182
           DVVFEIPRH+SHSG  MPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIEKL T
Sbjct: 128 DVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLPT 187

Query: 183 ITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 242
           +TVTEDLLNS+MNQCAVCID F K   VKQMPCKHVFHDYC+LPWLELHNSCP+CRFELP
Sbjct: 188 VTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCPVCRFELP 247

Query: 243 TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDS 299
           TDDSDYENRTR +++Q NESSGEESGSG+ GS+  RVERRFRVPLWWPFG RNDGSDS
Sbjct: 248 TDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRNDGSDS 305

[Close]

BLAST of CSPI05G13810 vs. NCBI nr
Match: XP_023551575.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 515.8 bits (1327), Expect = 2.6e-142
Identity = 246/298 (82.55%), Postives = 265/298 (88.93%), Query Frame = 0


Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD--NSNSNLNFDPTSFFLPQP 62
           +AVDKPFFCHQCDRAVTV VS SSDPLCP C+EGFLEEY+  NSNSN+N D  +  LP P
Sbjct: 8   AAVDKPFFCHQCDRAVTVIVSPSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGTLLLPDP 67

Query: 63  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 122
           FR FNPLV SSSTVVDLQNPG+FSRTL+  SQS SSV  EPYDPFVFLQNHLR IF+SGA
Sbjct: 68  FRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDSGA 127

Query: 123 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 182
           DVVFEIPRH+SHSG  MPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIEKL T
Sbjct: 128 DVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLPT 187

Query: 183 ITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 242
           +TVTEDLLNS+MNQCAVCID F K   VKQMPCKHVFHDYC+LPWLELHNSCP+CRFELP
Sbjct: 188 MTVTEDLLNSEMNQCAVCIDGFEKDTEVKQMPCKHVFHDYCILPWLELHNSCPVCRFELP 247

Query: 243 TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDS 299
           TDDSDYENRTR +++Q NESSGEESGSG+ GS+  RVERRFRVPLWWPFG RNDGSDS
Sbjct: 248 TDDSDYENRTRASQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRNDGSDS 305

[Close]

BLAST of CSPI05G13810 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 325.1 bits (832), Expect = 6.0e-89
Identity = 166/303 (54.79%), Postives = 206/303 (67.99%), Query Frame = 0


Query: 5   VDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD--NSNSNLNFDPTS----FFLP 64
           VDK FFC+QC++ VT+S+S S+DP CP+C++GFLEEY+  N N +LNF+P S    F + 
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMA 76

Query: 65  QPFRRFNPLVFSSSTVV--DLQNPGIFSRTLAPPSQST-SSVHHEPYDPFVFLQNHLRSI 124
            PF    PL+F SS      +    +F  ++ P ++ST  +   + +DPF FLQNHL+++
Sbjct: 77  DPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTL 136

Query: 125 FESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAI 184
             SG    F I  H S  G  MP N GDYF GPGLEQLIQ LAENDPNRYGTPPASKSAI
Sbjct: 137 RSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI 196

Query: 185 EKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPIC 244
           + L T+ VT+D+L S+MNQCAVC+D+F  G  VKQMPCKHVFH  CLLPWLELHNSCP+C
Sbjct: 197 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 256

Query: 245 RFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDG 299
           RFELPTDD DYENR+     QG++ SG+  GS     +      RF + L WPF  R DG
Sbjct: 257 RFELPTDDPDYENRS-----QGSQGSGDGQGSVEGQQT-----PRFSIQLPWPF-RRQDG 308

[Close]

BLAST of CSPI05G13810 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-39
Identity = 108/323 (33.44%), Postives = 154/323 (47.68%), Query Frame = 0


Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDP------TS 60
           M  AV   ++CH C +  TV+  + ++  CP C  GF+EE ++ + + + DP       S
Sbjct: 1   MEEAVVTRYWCHMCSQ--TVNPVMEAEIKCPFCQSGFVEEMEDDDDHDSSDPADVRANNS 60

Query: 61  FFLP-------QPF-RRFNPLVFS----------------SSTVVDLQNPGIFSRT---- 120
            + P        P  RR N  V S                    +D Q   I  R     
Sbjct: 61  LWAPILMELMNDPVRRRRNQSVESVEDNQNEVQTENNEDDGENDLDWQLQEILRRRRRHS 120

Query: 121 -------------LAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGADVVFEIPRHSSHS 180
                        L+  S+ST +  + P           R I  + ++    +   +   
Sbjct: 121 AAVLQLLQGIRAGLSVESESTGNGGNNPG----------RVILINTSNQTITVQNSADMD 180

Query: 181 GVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLSTITVTEDLLNSQMN 240
            VP   ++GDYFIGPG E L+Q LAENDPNRYGTPPA K A+E L+T+ + E L      
Sbjct: 181 SVP-AGSLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------ 240

Query: 241 QCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELPTDDSDYENRTREN 277
           QC+VC+DDF  G   K MPC H FH  CLLPWLELH+SCP+CR++LP D++  ++ T  +
Sbjct: 241 QCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSVTTTS 300

[Close]

BLAST of CSPI05G13810 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.4e-37
Identity = 85/175 (48.57%), Postives = 104/175 (59.43%), Query Frame = 0


Query: 136 PMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLSTITVTEDLLNSQMNQC 195
           P   ++GDYFIGPGL+ L+Q LAENDPNR GTPPA K A+E L T+ + E L      QC
Sbjct: 206 PSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QC 265

Query: 196 AVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELPTD---------DSDY 255
           +VC+DDF KG   K+MPCKH FH  C++PWLELH+SCP+CRFELP+          DS+ 
Sbjct: 266 SVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSER 325

Query: 256 ENRTRENRMQGNESSGEESGSGSSG--SSMRRVE-RRFRVPLWWPFGSRNDGSDS 299
             RTR  R   N +  E  G+   G    +R    RRF  P  WPF      S S
Sbjct: 326 VLRTRNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSFP--WPFSGLFSSSSS 372

[Close]

BLAST of CSPI05G13810 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 143.7 bits (361), Expect = 2.5e-34
Identity = 101/302 (33.44%), Postives = 142/302 (47.02%), Query Frame = 0


Query: 10  FCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQPFRRFNPLVF 69
           +CH+C RAV +      +P+C  C  GF+EE D + ++  FD         FR    +V 
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQAS-PFD--------MFRSHRGVVE 68

Query: 70  SSSTVVDLQNPGIFSRT-LAPPSQ---------STSSVHHEPYDPFVFLQNHLRSIFESG 129
              T   +    +F R  LA  S          S+   +     P +     +   +   
Sbjct: 69  RDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP--YRLT 128

Query: 130 ADVVFEIPRHSSHSGVPMPQ-NVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKL 189
            D   E   +    G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L
Sbjct: 129 GDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDAL 188

Query: 190 STITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFE 249
            TI + +  L S  + C VC D+F  G   KQMPC H++H  C++PWL  HNSCP+CR E
Sbjct: 189 PTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQE 248

Query: 250 LP--TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 299
           LP  +  S  +NRT   R   + SS   S S  +G+     ERR     +WPF S    S
Sbjct: 249 LPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSGSSS 290

[Close]

BLAST of CSPI05G13810 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 143.7 bits (361), Expect = 2.5e-34
Identity = 101/302 (33.44%), Postives = 142/302 (47.02%), Query Frame = 0


Query: 10  FCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQPFRRFNPLVF 69
           +CH+C RAV +      +P+C  C  GF+EE D + ++  FD         FR    +V 
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQAS-PFD--------MFRSHRGVVE 68

Query: 70  SSSTVVDLQNPGIFSRT-LAPPSQ---------STSSVHHEPYDPFVFLQNHLRSIFESG 129
              T   +    +F R  LA  S          S+   +     P +     +   +   
Sbjct: 69  RDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP--YRLT 128

Query: 130 ADVVFEIPRHSSHSGVPMPQ-NVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKL 189
            D   E   +    G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L
Sbjct: 129 GDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDAL 188

Query: 190 STITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFE 249
            TI + +  L S  + C VC D+F  G   KQMPC H++H  C++PWL  HNSCP+CR E
Sbjct: 189 PTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQE 248

Query: 250 LP--TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 299
           LP  +  S  +NRT   R   + SS   S S  +G+     ERR     +WPF S    S
Sbjct: 249 LPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSGSSS 290

The following BLAST results are available for this feature:

BLAST of CSPI05G13810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	8.4e-88	54.79	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	8.7e-85	53.04	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
O22197	3.5e-33	33.44	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	1.7e-32	32.00	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
Q6AVN2	2.7e-30	29.80	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]

BLAST of CSPI05G13810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT93	5.5e-175	99.33	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G350590 PE...	[more]
A0A5A7UNL2	1.4e-157	91.00	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1FJU6	2.5e-143	82.55	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111444684...	[more]
A0A6J1K1C4	4.4e-140	80.87	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111489246 P...	[more]
A0A6J1H9Y0	2.9e-136	78.22	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461423...	[more]

BLAST of CSPI05G13810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149872.1	1.1e-174	99.33	E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_011655156.1 E3 ubiq...	[more]
KAA0055876.1	2.8e-157	91.00	E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK24099.1 E3...	[more]
XP_038907201.1	6.1e-152	86.47	E3 ubiquitin-protein ligase RING1-like [Benincasa hispida]	[more]
XP_022938450.1	5.1e-143	82.55	E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]	[more]
XP_023551575.1	2.6e-142	82.55	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI05G13810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	6.0e-89	54.79	RING/U-box superfamily protein	[more]
AT1G55530.1	1.9e-39	33.44	RING/U-box superfamily protein	[more]
AT5G56340.1	1.4e-37	48.57	RING/U-box superfamily protein	[more]
AT2G40830.2	2.5e-34	33.44	RING-H2 finger C1A	[more]
AT2G40830.1	2.5e-34	33.44	RING-H2 finger C1A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 195..235 e-value: 5.9E-6 score: 35.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 193..236 e-value: 1.5E-12 score: 47.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 195..236 score: 12.282736
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 158..242 e-value: 1.8E-21 score: 77.6
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 9..41 e-value: 2.1E-12 score: 47.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..276
None	No IPR available	PANTHER	PTHR15710:SF91	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE	coord: 5..266
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 5..266
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 175..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G13810.2	CSPI05G13810.2	mRNA
CSPI05G13810.1	CSPI05G13810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity