CSPI05G13700 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G13700
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCACTA en-spm transposon protein
LocationChr5: 13650621 .. 13650956 (+)
RNA-Seq ExpressionCSPI05G13700
SyntenyCSPI05G13700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACCAACGACATCCTTGGGGGACGACACTACGGTGAGTGGTAATTTTGATGTTAAGTGCAAACAATTACATGTAATCACAATTTGTTCCTTACATTACTTGATTTCTATAGCAGAAGTGTCTCAACCCTCTCCAACTCCCAAGAAACGTCAACAGTCTCAAAACATGGAGTTGGAGAAGTACGTTCCTAAGAATGATATAATTCTAATTACCATAGCCCTAGGAGCGGAAAAGCCAATATCTCCACAAGCTATACAATTTAGCAACACCATTGCCATGTGTGTGAGAAATACATTACCAGTCCTCTGCCTTAGGTGGGCTGATCTTGGGTGA

mRNA sequence

ATGGGACCAACGACATCCTTGGGGGACGACACTACGGTGAGTGGTAATTTTGATGTTAAGTGCAAACAATTACATGTAATCACAATTTGTTCCTTACATTACTTGATTTCTATAGCAGAAGTGTCTCAACCCTCTCCAACTCCCAAGAAACGTCAACAGTCTCAAAACATGGAGTTGGAGAAGTACGTTCCTAAGAATGATATAATTCTAATTACCATAGCCCTAGGAGCGGAAAAGCCAATATCTCCACAAGCTATACAATTTAGCAACACCATTGCCATGTGTGTGAGAAATACATTACCAGTCCTCTGCCTTAGGTGGGCTGATCTTGGGTGA

Coding sequence (CDS)

ATGGGACCAACGACATCCTTGGGGGACGACACTACGGTGAGTGGTAATTTTGATGTTAAGTGCAAACAATTACATGTAATCACAATTTGTTCCTTACATTACTTGATTTCTATAGCAGAAGTGTCTCAACCCTCTCCAACTCCCAAGAAACGTCAACAGTCTCAAAACATGGAGTTGGAGAAGTACGTTCCTAAGAATGATATAATTCTAATTACCATAGCCCTAGGAGCGGAAAAGCCAATATCTCCACAAGCTATACAATTTAGCAACACCATTGCCATGTGTGTGAGAAATACATTACCAGTCCTCTGCCTTAGGTGGGCTGATCTTGGGTGA

Protein sequence

MGPTTSLGDDTTVSGNFDVKCKQLHVITICSLHYLISIAEVSQPSPTPKKRQQSQNMELEKYVPKNDIILITIALGAEKPISPQAIQFSNTIAMCVRNTLPVLCLRWADLG*
Homology
BLAST of CSPI05G13700 vs. ExPASy TrEMBL
Match: A0A5A7TW39 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00190 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-14
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 0

Query: 45  SPTPKKRQQSQNMELEKYVPKNDIILITIALGAEKPISPQAIQFSNTIAMCVRNTLPVLC 104
           +PTP++R QS+ +ELE+YV  N  IL+T A GAEKPISP A++FS  I +CVR T P+ C
Sbjct: 46  TPTPRRRAQSRLLELERYVATNGCILMTTAPGAEKPISPHAVRFSQAIGVCVRKTFPIRC 105

Query: 105 LRWADLG 112
           L+WAD+G
Sbjct: 106 LKWADVG 112

BLAST of CSPI05G13700 vs. ExPASy TrEMBL
Match: A0A5A7TQ98 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00520 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.4e-14
Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 43  QPSPTPKKRQQSQNMELEKYVPKNDIILITIALGAEKPISPQAIQFSNTIAMCVRNTLPV 102
           Q +PTP++R QS+ +ELE++V  N  I +TIA GAEKPISP A++FS TI +CVR T PV
Sbjct: 35  QMTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQTIGVCVRKTFPV 94

Query: 103 LCLRWADLG 112
            CL+WAD+G
Sbjct: 95  RCLKWADVG 103

BLAST of CSPI05G13700 vs. ExPASy TrEMBL
Match: A0A5A7UBZ3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G001260 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.4e-14
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 43  QPSPTPKKRQQSQNMELEKYVPKNDIILITIALGAEKPISPQAIQFSNTIAMCVRNTLPV 102
           Q +PTP++R QS+ +ELE++V  N  I +TIA GAEKPISP A++FS  I MCVR T PV
Sbjct: 35  QTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGMCVRKTFPV 94

Query: 103 LCLRWADLG 112
            CL+WAD+G
Sbjct: 95  RCLKWADVG 103

BLAST of CSPI05G13700 vs. ExPASy TrEMBL
Match: A0A5D3DYB1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001860 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.1e-14
Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 0

Query: 42  SQPSPTPKKRQQSQNMELEKYVPKNDIILITIALGAEKPISPQAIQFSNTIAMCVRNTLP 101
           +QPSPTP++R QS+ +ELE+YV  N  IL++IA   EKPISP  ++ S  I MC+RNT  
Sbjct: 80  TQPSPTPRRRAQSRLLELERYVHTNGKILMSIASSMEKPISPHVVRLSQAIGMCIRNTFS 139

Query: 102 VLCLRWADLG 112
           + C+RWAD+G
Sbjct: 140 ICCIRWADVG 149

BLAST of CSPI05G13700 vs. ExPASy TrEMBL
Match: A0A5A7ULT1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00410 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.1e-14
Identity = 40/69 (57.97%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 43  QPSPTPKKRQQSQNMELEKYVPKNDIILITIALGAEKPISPQAIQFSNTIAMCVRNTLPV 102
           Q +PTP++R QSQ +ELE++V  N  I +TIALGAEKPISP A++FS  I +CV+   PV
Sbjct: 196 QATPTPRRRAQSQLLELERHVAINGCIPMTIALGAEKPISPHAVRFSQAIGVCVQKIFPV 255

Query: 103 LCLRWADLG 112
            CL+WAD+G
Sbjct: 256 RCLKWADVG 264

BLAST of CSPI05G13700 vs. NCBI nr
Match: KAA0047783.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-14
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 0

Query: 45  SPTPKKRQQSQNMELEKYVPKNDIILITIALGAEKPISPQAIQFSNTIAMCVRNTLPVLC 104
           +PTP++R QS+ +ELE+YV  N  IL+T A GAEKPISP A++FS  I +CVR T P+ C
Sbjct: 46  TPTPRRRAQSRLLELERYVATNGCILMTTAPGAEKPISPHAVRFSQAIGVCVRKTFPIRC 105

Query: 105 LRWADLG 112
           L+WAD+G
Sbjct: 106 LKWADVG 112

BLAST of CSPI05G13700 vs. NCBI nr
Match: KAA0045294.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 4.9e-14
Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 43  QPSPTPKKRQQSQNMELEKYVPKNDIILITIALGAEKPISPQAIQFSNTIAMCVRNTLPV 102
           Q +PTP++R QS+ +ELE++V  N  I +TIA GAEKPISP A++FS TI +CVR T PV
Sbjct: 35  QMTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQTIGVCVRKTFPV 94

Query: 103 LCLRWADLG 112
            CL+WAD+G
Sbjct: 95  RCLKWADVG 103

BLAST of CSPI05G13700 vs. NCBI nr
Match: KAA0051736.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 4.9e-14
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0

Query: 43  QPSPTPKKRQQSQNMELEKYVPKNDIILITIALGAEKPISPQAIQFSNTIAMCVRNTLPV 102
           Q +PTP++R QS+ +ELE++V  N  I +TIA GAEKPISP A++FS  I MCVR T PV
Sbjct: 35  QTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGMCVRKTFPV 94

Query: 103 LCLRWADLG 112
            CL+WAD+G
Sbjct: 95  RCLKWADVG 103

BLAST of CSPI05G13700 vs. NCBI nr
Match: KAA0041031.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 6.4e-14
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0

Query: 43  QPSPTPKKRQQSQNMELEKYVPKNDIILITIALGAEKPISPQAIQFSNTIAMCVRNTLPV 102
           Q +PTP+KR QS+ +ELE +V  N  I +TIALGAEKPISP  I+FS  I +CVR T P+
Sbjct: 34  QTTPTPRKRAQSRLLELEHHVAINGRIPMTIALGAEKPISPHVIRFSQAIGVCVRKTFPI 93

Query: 103 LCLRWADLG 112
            CL+WAD+G
Sbjct: 94  RCLKWADVG 102

BLAST of CSPI05G13700 vs. NCBI nr
Match: TYK15354.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 6.4e-14
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0

Query: 43  QPSPTPKKRQQSQNMELEKYVPKNDIILITIALGAEKPISPQAIQFSNTIAMCVRNTLPV 102
           Q +PTP+KR QS+ +ELE +V  N  I +TIALGAEKPISP  I+FS  I +CVR T P+
Sbjct: 178 QTTPTPRKRAQSRLLELEHHVAINGRIPMTIALGAEKPISPHVIRFSQAIGVCVRKTFPI 237

Query: 103 LCLRWADLG 112
            CL+WAD+G
Sbjct: 238 RCLKWADVG 246

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TW391.1e-1458.21CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7TQ982.4e-1459.42CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7UBZ32.4e-1459.42CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3DYB13.1e-1454.29CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7ULT13.1e-1457.97CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
Match NameE-valueIdentityDescription
KAA0047783.12.2e-1458.21CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0045294.14.9e-1459.42CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0051736.14.9e-1459.42CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0041031.16.4e-1459.42CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYK15354.16.4e-1459.42CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G13700.1CSPI05G13700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane