CSPI05G13480 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G13480
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 13145027 .. 13145230 (+)
RNA-Seq ExpressionCSPI05G13480
SyntenyCSPI05G13480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCCAACGAAGGCAGGCGCAAACGAACTGTGGGGCTCGGCTGGAGGACTATGCAACCCGAATGGACGATGACTTCAGGCGAACGGTACAGTAGGGACAGAACGAGGAGAAGAGATCGGACGTCGGCGTGCTTGCGTGGACGAAGCTTGGACTCGGCGGGATCTTGGCTTCGTCGGAAGTATAGACAGTTGGCAGTGGTT

mRNA sequence

ATGAAATCCAACGAAGGCAGGCGCAAACGAACTGTGGGGCTCGGCTGGAGGACTATGCAACCCGAATGGACGATGACTTCAGGCGAACGGTACAGTAGGGACAGAACGAGGAGAAGAGATCGGACGTCGGCGTGCTTGCGTGGACGAAGCTTGGACTCGGCGGGATCTTGGCTTCGTCGGAAGTATAGACAGTTGGCAGTGGTT

Coding sequence (CDS)

ATGAAATCCAACGAAGGCAGGCGCAAACGAACTGTGGGGCTCGGCTGGAGGACTATGCAACCCGAATGGACGATGACTTCAGGCGAACGGTACAGTAGGGACAGAACGAGGAGAAGAGATCGGACGTCGGCGTGCTTGCGTGGACGAAGCTTGGACTCGGCGGGATCTTGGCTTCGTCGGAAGTATAGACAGTTGGCAGTGGTT

Protein sequence

MKSNEGRRKRTVGLGWRTMQPEWTMTSGERYSRDRTRRRDRTSACLRGRSLDSAGSWLRRKYRQLAVV
Homology
[Close]
BLAST of CSPI05G13480 vs. NCBI nr
Match: KAE8648332.1 (hypothetical protein Csa_023077 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 1.4e-27
Identity = 65/68 (95.59%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 1  MKSNEGRRKRTVGLGWRTMQPEWTMTSGERYSRDRTRRRDRTSACLRGRSLDSAGSWLRR 60
          MKS EGRRKRTVGLGWRTMQPEWT TSGERYS DRTRRRDRTSACLRGRSLDSAGSWLRR
Sbjct: 1  MKSTEGRRKRTVGLGWRTMQPEWTTTSGERYSSDRTRRRDRTSACLRGRSLDSAGSWLRR 60

Query: 61 KYRQLAVV 69
          KYRQLAVV
Sbjct: 61 KYRQLAVV 68

The following BLAST results are available for this feature:
BLAST of CSPI05G13480 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G13480 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G13480 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648332.11.4e-2795.59hypothetical protein Csa_023077 [Cucumis sativus][more]
BLAST of CSPI05G13480 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G13480.1CSPI05G13480.1mRNA