CSPI05G13470 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G13470
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 13143492 .. 13145324 (-)
RNA-Seq ExpressionCSPI05G13470
SyntenyCSPI05G13470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCGTGCCCGTCGAGCCGCCCCACCACTCTTCTCCGATCCACGGCCGCCGCCCCTATTTTTCTTCCTTCTCTTTCGTTTTTCTCTTCCGTTCAAACCACTGCCAACTGTCTATACTTCCGACGAAGCCAAGATCCCGCCGAGTCCAAGCTTCGTCCACGCAAGCACGCCGACGTCCGATCTCTTCTCCTCGTTCTGTCCCTACTGTACCGTTCGCCTGAAGTCATCGTCCATTCGGGTTGCATAGTCCTCCAGCCGAGCCCCACAGTTCGTTTGCGCCTGCCTTCGTTGGATTTCATCCGCCTCAAATCTCGACTAGCCACCGTGCTCCACCCCCAATAGTCACGTCGTTGACCGTCCGAACATAGCCCAAACTTCCAACTGAAACGTTTGGTCTGCACCGCCTTGAACAGGGGTAGTCGACTCGCCGTGCCAGTTCAGGTCTGTAGCTTCATTCGCGTCGGTCTCCATCCATGAAGCTCACTCACCACGTCTCCCTTAGCCGACGGCTGCCGATCGACTCACACTTAAGGGTTTTCCATGCGTCCGACAGTCGTGTGTCGTGGTGTGTCACCGCCTCTGTTTTACAGTGATTTTTTGAAGTTGCGTTGTTGGTAACAATTTAAGTATGGGTTGTAATTGTTTCTAATGTTCAAATGTTATGGTTGGAATGGTTGATTAATCTGTTGTTTGATTCTTGAAGGAGTTGGAAATAACGTTGAATGAATTCACGACAAATTTGTGAACTTTGAGTTCGGTTCACCAATACCTTAGTAAGTTAGAACTTGCATTGAGGAAATTAAGTGGAGTATGTGTTGTGAAAGTAACAGAGTTACTTTGTCCTTATGGTTAGGTGTCCTTCGTGGGATTTAGCTGTTTGAAAGATTGAGCAACCTTGAGGTAAGGAACTTTCTTGTCAATTTCAACGAACGATTTGACTGTTACGGGACTTGACCAAACGTAAAGGGTATGACTGTTAAGTATAAGTTGACGTGGTTAAAGGGACTTAATGGCTTTAAATAGTTTTATGTGTGTTCATGGAAATGACTAAATTAAAATGTTTGTTGACTGAACTGAGGATGGTTGACTCTTATGTGGAGGGTATACGTCTAACTGAATTTATATATGTACATAAATTGACGTAGACTTGATGTTGAATGCATATGGAGATTGTCTGGGATTAAATATGTAGATGTGGATGTAGGCAGGATGATCTTAATTGATTGTGTTGTATAAAATTTTGGATGTGAGCTTGTGACTTTGACTCGATTGGGTGTAGGTTGTACTAATGTGTGGCTGTACTGGTGAACTGAGGGCGTTATGAATTTGCGGTTTGCGGTTTGATTGACTGATGTATTAAAATGTTACCAATGTTCTCTGGATTAAAGTGAGATAGGTTGAGTGTTAGAACGTTAAGTGAGAGAATTATATATGTTAAAGTAGTTGAACAGTGTTATAAATGACTATTAAGAGGTTTAGAATGGACTGAGGGAAAAATTGTTAGCTTTATTGGGATGTGTGCTTTGCAAGACACTAGTCTGATATGTGTTTCTACAGAACACTAGACTGAAATGTACGTCCCTTGAGGCGTTAGTCTGATATGTGTATCATACGGGATCACAAGAATGTGACATTGCAGGGTATCCCAATAGGACGTTAACAATTTATTTTTCCTAACAGGACAAGTAGCGGGTCTTTTACTGAGTATGTTTATACTCACCCGTCTTTGTTTAATTTTTCAGGCAAAGGTAAGAAGAGTGGCAAACCGGCGAGGGGCAGGAAGGAAGTGTGATTGCCATAGGGAACATCTTTATTTTGCTTCCGCTTTATGTTC

mRNA sequence

CACCGTGCCCGTCGAGCCGCCCCACCACTCTTCTCCGATCCACGGCCGCCGCCCCTATTTTTCTTCCTTCTCTTTCGTTTTTCTCTTCCGTTCAAACCACTGCCAACTGTCTATACTTCCGACGAAGCCAAGATCCCGCCGAGTCCAAGCTTCGTCCACGCAAGCACGCCGACGTCCGATCTCTTCTCCTCGTTCTGTCCCTACTGTACCGTTCGCCTGAAGTCATCGTCCATTCGGGTTGCATAGTCCTCCAGCCGAGCCCCACAGTTCGTTTGCGCCTGCCTTCGTTGGATTTCATCCGCCTCAAATCTCGACTAGCCACCGTGCTCCACCCCCAATAGTCACGTCGTTGACCGTCCGAACATAGCCCAAACTTCCAACTGAAACGTTTGGTCTGCACCGCCTTGAACAGGGGTAGTCGACTCGCCGTGCCAGTTCAGGTCTGTAGCTTCATTCGCGTCGGTCTCCATCCATGAAGCTCACTCACCACGTCTCCCTTAGCCGACGGCTGCCGATCGACTCACACTTAAGGGTTTTCCATGCGTCCGACAGTCGTGTGTCGTGGAGTTGGAAATAACGTTGAATGAATTCACGACAAATTTGTGAACTTTGAGTTCGGTTCACCAATACCTTAGTGTCCTTCGTGGGATTTAGCTGTTTGAAAGATTGAGCAACCTTGAGGCAAAGGTAAGAAGAGTGGCAAACCGGCGAGGGGCAGGAAGGAAGTGTGATTGCCATAGGGAACATCTTTATTTTGCTTCCGCTTTATGTTC

Coding sequence (CDS)

CCGTGCCCGTCGAGCCGCCCCACCACTCTTCTCCGATCCACGGCCGCCGCCCCTATTTTTCTTCCTTCTCTTTCGTTTTTCTCTTCCGTTCAAACCACTGCCAACTGTCTATACTTCCGACGAAGCCAAGATCCCGCCGAGTCCAAGCTTCGTCCACGCAAGCACGCCGACGTCCGATCTCTTCTCCTCGTTCTGTCCCTACTGTACCGTTCGCCTGAAGTCATCGTCCATTCGGGTTGCATAGTCCTCCAGCCGAGCCCCACAGTTCGTTTGCGCCTGCCTTCGTTGGATTTCATCCGCCTCAAATCTCGACTAGCCACCGTGCTCCACCCCCAATAG

Protein sequence

PCPSSRPTTLLRSTAAAPIFLPSLSFFSSVQTTANCLYFRRSQDPAESKLRPRKHADVRSLLLVLSLLYRSPEVIVHSGCIVLQPSPTVRLRLPSLDFIRLKSRLATVLHPQ*
Homology
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BLAST of CSPI05G13470 vs. ExPASy TrEMBL
Match: A0A0A0LUP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G480150 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.6e-26
Identity = 68/85 (80.00%), Postives = 72/85 (84.71%), Query Frame = 0 

Query: 1  PCPSSRPTTLLRSTAAAPIFLPSLSFFSSVQTTANCLYFRRSQDPAESKLRPRKHADVRS 60
          P   S P+ LLRSTAAAPI LPSLSFFSSVQTT +CLYFRRSQDPAESKLRPRKHA+VRS
Sbjct: 12 PPHHSSPSFLLRSTAAAPILLPSLSFFSSVQTTTDCLYFRRSQDPAESKLRPRKHANVRS 71

Query: 61 LLLVLSLLYRSPEVIVHSGCIVLQP 86
          LLLV   LYRSPEV+VHSGC V  P
Sbjct: 72 LLLVPPPLYRSPEVVVHSGCTVEPP 96

The following BLAST results are available for this feature:
BLAST of CSPI05G13470 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G13470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUP93.6e-2680.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G480150 PE=4 SV=1[more]
BLAST of CSPI05G13470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI05G13470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G13470.1CSPI05G13470.1mRNA
CSPI05G13470.2CSPI05G13470.2mRNA