CSPI05G12770 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G12770
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 12108758 .. 12109151 (+)
RNA-Seq ExpressionCSPI05G12770
SyntenyCSPI05G12770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAATTCTATTACGCATGTGATCTGAAGGAGCAACAGCACTGGATGCTGAAGAAGTGGCATTGGGGGTTGAGAGGTGAGATAGCCGCCCTAGACGAACGTAGGTGGTTGTTAAAGTAACTTGAGAATAGGTTTATTTGTTAGCTTCAGCAAGCAAGTTGATAGTACAAGTTATTTTGTTAGTCTCTCTCGTGTAAACTCGGGTACTTATACCCTTTGTCAATATGCAGAAAAGTCAAGGATTACATTAGAGTAAGCTATTCTCATTATTGTTTGCTCTGAATGTATTGTTTTCTTAAGTGTGGTCGACGACAAAGTACGTGAAGCAGATGATTGGTGGATGATGGAAAGGCCGCTGGTGGCTGACGTTGGTCACAGGTTGAGGAAGTGA

mRNA sequence

ATGGAGAAATTCTATTACGCATGTGATCTGAAGGAGCAACAGCACTGGATGCTGAAGAAGTGGCATTGGGGGTTGAGAGGTGAGATAGCCGCCCTAGACGAACGTAGGTGGTTGTTAAATGTGGTCGACGACAAAGTACGTGAAGCAGATGATTGGTGGATGATGGAAAGGCCGCTGGTGGCTGACGTTGGTCACAGGTTGAGGAAGTGA

Coding sequence (CDS)

ATGGAGAAATTCTATTACGCATGTGATCTGAAGGAGCAACAGCACTGGATGCTGAAGAAGTGGCATTGGGGGTTGAGAGGTGAGATAGCCGCCCTAGACGAACGTAGGTGGTTGTTAAATGTGGTCGACGACAAAGTACGTGAAGCAGATGATTGGTGGATGATGGAAAGGCCGCTGGTGGCTGACGTTGGTCACAGGTTGAGGAAGTGA

Protein sequence

MEKFYYACDLKEQQHWMLKKWHWGLRGEIAALDERRWLLNVVDDKVREADDWWMMERPLVADVGHRLRK*
Homology
[Close]
BLAST of CSPI05G12770 vs. ExPASy TrEMBL
Match: A0A0A0KPE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G255680 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.9e-35
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 0 

Query: 1  MEKFYYACDLKEQQHWMLKKWHWGLRGEIAALDERRWLLNVVDDKVREADDWWMMERPLV 60
          MEKFYYACDLKEQQHWMLKKWHWGLR EIAALDERRWLLNVVDDKVREADDWWMMERPLV
Sbjct: 1  MEKFYYACDLKEQQHWMLKKWHWGLRAEIAALDERRWLLNVVDDKVREADDWWMMERPLV 60

Query: 61 ADVGHRLRK 70
          ADVGHRLRK
Sbjct: 61 ADVGHRLRK 69

[Close]
BLAST of CSPI05G12770 vs. NCBI nr
Match: KAE8637329.1 (hypothetical protein CSA_023972, partial [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 6.0e-18
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 24 GLRGEIAALDERRWLLNVVDDKVREADDWWMMERPLVADVGHRLRK 70
          GLR EIAALDERRWLLNVVDDKVREADDWWMMERPLVADVGHRLRK
Sbjct: 15 GLRAEIAALDERRWLLNVVDDKVREADDWWMMERPLVADVGHRLRK 60

The following BLAST results are available for this feature:
BLAST of CSPI05G12770 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G12770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPE39.9e-3598.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G255680 PE=4 SV=1[more]
BLAST of CSPI05G12770 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8637329.16.0e-1897.83hypothetical protein CSA_023972, partial [Cucumis sativus][more]
BLAST of CSPI05G12770 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G12770.1CSPI05G12770.1mRNA