Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGCATCTCGCAGCAAACAAAGGAGAATGGTGGAATGTCGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGCGGACGATAAAGGCAGAAGCAATCCTCGATGTCCAAGGAGTTTGGGATGCAATAGAGCTAGCGAGAGGAGCCGAAGTGGATGTGAAGAAATACAAGAAGGCACGTGCATACATTCTCCAATGCATCCCGAAAGACGTGCTTCTAAAAATCGCAAAGAAGAAGACCGCACAGGAAATATGGGATAGTCACAAGACAAGGTATTTGGGTAGTGAGCGGGTGAAGATGGCAAGAGTTCAAACCTTGAAGAGTGAGCTTAATGTTCTTCGGATGAAGGAAACCGAGACAATCGATGAGTTCATAGGAAAGATCAGCGGATTAGTAAGCAAGTTCACCACCCTCGAAGTCGCACTTGAGGATTCATCATTGGTCAAGAAGCTCCTCGATTCCGTCCCCGACAAATATCTTTCCATTGTCGCCGAAATCAAGCAATTCCAAGATCTTGAAACCATGCCGTTTGAAGAAGCAATTGGACGGATGAAGGCGTACGAGGAATGA
mRNA sequence
ATGACAAGCATCTCGCAGCAAACAAAGGAGAATGGTGGAATGTCGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGCGGACGATAAAGGCAGAAGCAATCCTCGATGTCCAAGGAGTTTGGGATGCAATAGAGCTAGCGAGAGGAGCCGAAGTGGATGTGAAGAAATACAAGAAGGCACGTGCATACATTCTCCAATGCATCCCGAAAGACGTGCTTCTAAAAATCGCAAAGAAGAAGACCGCACAGGAAATATGGGATAGTCACAAGACAAGGTATTTGGGTAGTGAGCGGGTGAAGATGGCAAGAGTTCAAACCTTGAAGAGTGAGCTTAATGTTCTTCGGATGAAGGAAACCGAGACAATCGATGAGTTCATAGGAAAGATCAGCGGATTAGTAAGCAAGTTCACCACCCTCGAAGTCGCACTTGAGGATTCATCATTGGTCAAGAAGCTCCTCGATTCCGTCCCCGACAAATATCTTTCCATTGTCGCCGAAATCAAGCAATTCCAAGATCTTGAAACCATGCCGTTTGAAGAAGCAATTGGACGGATGAAGGCGTACGAGGAATGA
Coding sequence (CDS)
ATGACAAGCATCTCGCAGCAAACAAAGGAGAATGGTGGAATGTCGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGCGGACGATAAAGGCAGAAGCAATCCTCGATGTCCAAGGAGTTTGGGATGCAATAGAGCTAGCGAGAGGAGCCGAAGTGGATGTGAAGAAATACAAGAAGGCACGTGCATACATTCTCCAATGCATCCCGAAAGACGTGCTTCTAAAAATCGCAAAGAAGAAGACCGCACAGGAAATATGGGATAGTCACAAGACAAGGTATTTGGGTAGTGAGCGGGTGAAGATGGCAAGAGTTCAAACCTTGAAGAGTGAGCTTAATGTTCTTCGGATGAAGGAAACCGAGACAATCGATGAGTTCATAGGAAAGATCAGCGGATTAGTAAGCAAGTTCACCACCCTCGAAGTCGCACTTGAGGATTCATCATTGGTCAAGAAGCTCCTCGATTCCGTCCCCGACAAATATCTTTCCATTGTCGCCGAAATCAAGCAATTCCAAGATCTTGAAACCATGCCGTTTGAAGAAGCAATTGGACGGATGAAGGCGTACGAGGAATGA
Protein sequence
MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSELNVLRMKETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE*
Homology
BLAST of CSPI05G12750 vs. ExPASy TrEMBL
Match:
A0A5N6MA89 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_33044 PE=3 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 1.8e-54
Identity = 109/184 (59.24%), Postives = 147/184 (79.89%), Query Frame = 0
Query: 9 KENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQ 68
KE G +S+ P LT NYT +IK EAI+D QG+W++IE +G VD KK K ARA++ Q
Sbjct: 596 KEAGSVSLQIPNLTSTNYTTWSIKMEAIMDAQGLWESIETPQGLAVDEKKSKTARAFLFQ 655
Query: 69 CIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSELNVLRMKETETIDEFI 128
IP+DVLL++AKKKTA+E+W+S K RYLG++RV+ AR+ TLKSE + LRM+ETE+IDE+
Sbjct: 656 AIPEDVLLQVAKKKTAKEVWESLKLRYLGADRVQKARLNTLKSEFDALRMRETESIDEYA 715
Query: 129 GKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMK 188
GK+S ++SK ++L LEDS +V+KLLD+VPDKYL +VA I+Q DL+TMPFEEA+GR+K
Sbjct: 716 GKLSAMISKHSSLGQTLEDSMVVRKLLDTVPDKYLQLVASIEQTADLDTMPFEEAVGRLK 775
Query: 189 AYEE 193
AYE+
Sbjct: 776 AYED 779
BLAST of CSPI05G12750 vs. ExPASy TrEMBL
Match:
A0A5N6P849 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_12633 PE=4 SV=1)
HSP 1 Score: 218.8 bits (556), Expect = 2.0e-53
Identity = 110/192 (57.29%), Postives = 145/192 (75.52%), Query Frame = 0
Query: 1 MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYK 60
M + KE+ MS+ P+LT NYT IK EAILD QG+WDAIE G D KK K
Sbjct: 1 MAVATTSAKESNLMSLQCPVLTAQNYTTWAIKMEAILDAQGLWDAIEPPVGGVADEKKSK 60
Query: 61 KARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSELNVLRMKE 120
ARA++ Q IP+DVLL+++KKKTAQE+W+S K RYLG+ERV+ AR+ TL+SE LRMK+
Sbjct: 61 LARAFLFQAIPEDVLLQVSKKKTAQEVWESLKMRYLGAERVQKARLHTLRSEFEALRMKD 120
Query: 121 TETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPF 180
ETIDE+ GK+SG++SK ++L L DS LV+KL D+VPDK++ +VA I+Q+ DL++MPF
Sbjct: 121 GETIDEYTGKLSGMISKHSSLGETLGDSKLVRKLFDTVPDKFIPLVASIEQYSDLDSMPF 180
Query: 181 EEAIGRMKAYEE 193
EEAIGR+KAYE+
Sbjct: 181 EEAIGRLKAYED 192
BLAST of CSPI05G12750 vs. ExPASy TrEMBL
Match:
A0A5N6NYJ8 (CCHC-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_16352 PE=4 SV=1)
HSP 1 Score: 218.4 bits (555), Expect = 2.6e-53
Identity = 105/192 (54.69%), Postives = 148/192 (77.08%), Query Frame = 0
Query: 1 MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYK 60
+ + S K+ +S+ P LT NYT IK EA++D QG+W++IE GA VD KK K
Sbjct: 412 VATTSATPKDPSSVSLQIPSLTATNYTTWAIKMEAVMDAQGLWESIEPTPGAAVDEKKNK 471
Query: 61 KARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSELNVLRMKE 120
+RA+I Q IP+DVLL++AKKKTA+EIWDS K RY+G++RV+ AR+ TLK+E +L+MKE
Sbjct: 472 TSRAFIFQAIPEDVLLQVAKKKTAKEIWDSLKIRYMGADRVQKARLHTLKNEFELLKMKE 531
Query: 121 TETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPF 180
E++DEF GK++G+V+K+ +L ++D LV+KLLDSVPDKYL +VA I+Q+ D++TMPF
Sbjct: 532 GESVDEFAGKLAGMVTKYNSLGYTIKDEDLVRKLLDSVPDKYLQLVASIEQYSDIDTMPF 591
Query: 181 EEAIGRMKAYEE 193
+EAIGR+KAYE+
Sbjct: 592 DEAIGRLKAYED 603
BLAST of CSPI05G12750 vs. ExPASy TrEMBL
Match:
Q0JH75 (Os01g0879800 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0879800 PE=4 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 5.8e-53
Identity = 109/188 (57.98%), Postives = 144/188 (76.60%), Query Frame = 0
Query: 5 SQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARA 64
+ ++ G +S+ YP+LT NY+ IK EA ++ QG+WDAIE A VD+KK K+ARA
Sbjct: 17 ASRSMREGIVSLPYPVLTSTNYSTWAIKMEANMEAQGIWDAIEPAADEAVDIKKDKQARA 76
Query: 65 YILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSELNVLRMKETETI 124
+ +P+DVL +IAKKKTA+E+W+S KTR+LG ERVK ARVQTLKS+ L MK+TE+I
Sbjct: 77 CLFGAVPEDVLQQIAKKKTAKEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTESI 136
Query: 125 DEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAI 184
DEF GKISGL +K + L V ++D VKKLLDSVPDK+L ++A I+QF DL++MPF+EAI
Sbjct: 137 DEFAGKISGLANKLSDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPFDEAI 196
Query: 185 GRMKAYEE 193
GR+KAYEE
Sbjct: 197 GRLKAYEE 204
BLAST of CSPI05G12750 vs. ExPASy TrEMBL
Match:
Q2QUP7 (Laccase OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g15530 PE=3 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 5.8e-53
Identity = 109/188 (57.98%), Postives = 144/188 (76.60%), Query Frame = 0
Query: 5 SQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARA 64
+ ++ G +S+ YP+LT NY+ IK EA ++ QG+WDAIE A VD+KK K+ARA
Sbjct: 430 ASRSMREGIVSLPYPVLTSTNYSTWAIKMEANMEAQGIWDAIEPAADEAVDIKKDKQARA 489
Query: 65 YILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSELNVLRMKETETI 124
+ +P+DVL +IAKKKTA+E+W+S KTR+LG ERVK ARVQTLKS+ L MK+TE+I
Sbjct: 490 CLFGAVPEDVLQQIAKKKTAKEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTESI 549
Query: 125 DEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAI 184
DEF GKISGL +K + L V ++D VKKLLDSVPDK+L ++A I+QF DL++MPF+EAI
Sbjct: 550 DEFAGKISGLANKLSDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPFDEAI 609
Query: 185 GRMKAYEE 193
GR+KAYEE
Sbjct: 610 GRLKAYEE 617
BLAST of CSPI05G12750 vs. NCBI nr
Match:
XP_031745073.1 (uncharacterized protein LOC116405251 [Cucumis sativus])
HSP 1 Score: 320.5 bits (820), Expect = 1.0e-83
Identity = 170/192 (88.54%), Postives = 176/192 (91.67%), Query Frame = 0
Query: 1 MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYK 60
MTS SQQTKENGGM ILYPMLTPHNYTV TIKAEAILD QGVW+AIE ARGAEVDVKK K
Sbjct: 1 MTSTSQQTKENGGMPILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDK 60
Query: 61 KARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSELNVLRMKE 120
KA AYILQCIP+DVLL+IAKKKTA+EIWDS KTRYLGSERVKMARVQTLK E NVLRMKE
Sbjct: 61 KACAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKREFNVLRMKE 120
Query: 121 TETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPF 180
TE IDEF GKISGL SKFTTL VAL+DSSLVKKLLDSVPDKYL IVA I+QFQDLETMPF
Sbjct: 121 TEMIDEFAGKISGLASKFTTLGVALKDSSLVKKLLDSVPDKYLPIVAGIEQFQDLETMPF 180
Query: 181 EEAIGRMKAYEE 193
EEAIGRMKAYEE
Sbjct: 181 EEAIGRMKAYEE 192
BLAST of CSPI05G12750 vs. NCBI nr
Match:
XP_031737549.1 (uncharacterized protein LOC116402439 [Cucumis sativus])
HSP 1 Score: 318.2 bits (814), Expect = 5.0e-83
Identity = 170/192 (88.54%), Postives = 177/192 (92.19%), Query Frame = 0
Query: 1 MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYK 60
M SISQQTKENGGMSILY MLTPHNYTV TIKAEAILD QGV +AIE ARGAEVDVKK K
Sbjct: 1 MASISQQTKENGGMSILYSMLTPHNYTVWTIKAEAILDAQGVREAIEPARGAEVDVKKDK 60
Query: 61 KARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSELNVLRMKE 120
KAR+YILQCIP+DVLL+IAKKKTA+EIWDS KTRYLGSERVKMARVQTLKSE +VLRMKE
Sbjct: 61 KARSYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFSVLRMKE 120
Query: 121 TETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPF 180
TETIDEF GKISGL SKFTTL VALEDSSLVKKLLDSVPDKYL IV I+QFQDLETMPF
Sbjct: 121 TETIDEFAGKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLPIVVGIEQFQDLETMPF 180
Query: 181 EEAIGRMKAYEE 193
EEAIGRMKAYEE
Sbjct: 181 EEAIGRMKAYEE 192
BLAST of CSPI05G12750 vs. NCBI nr
Match:
XP_031741713.1 (uncharacterized protein LOC116403908 [Cucumis sativus])
HSP 1 Score: 304.3 bits (778), Expect = 7.5e-79
Identity = 160/179 (89.39%), Postives = 166/179 (92.74%), Query Frame = 0
Query: 14 MSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYKKARAYILQCIPKD 73
MSILYPMLTPHNYTV TIKAEAIL+ QGVW+AIE ARGAEVDVKK KKARAYILQCIP+D
Sbjct: 1 MSILYPMLTPHNYTVWTIKAEAILNAQGVWEAIEPARGAEVDVKKDKKARAYILQCIPED 60
Query: 74 VLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSELNVLRMKETETIDEFIGKISG 133
VLL+IAKKKTA+EIWDS KTRYLGSERVKMARVQTLKSE NVLRMKE ETIDEF+GKISG
Sbjct: 61 VLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETIDEFVGKISG 120
Query: 134 LVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPFEEAIGRMKAYEE 193
L SKFTTL VALEDSSLV KLLDSVPDKYL IV IKQFQDLETMPFEEAIGRMKAYEE
Sbjct: 121 LASKFTTLRVALEDSSLVNKLLDSVPDKYLPIVVGIKQFQDLETMPFEEAIGRMKAYEE 179
BLAST of CSPI05G12750 vs. NCBI nr
Match:
XP_011658449.1 (uncharacterized protein LOC105436008 [Cucumis sativus])
HSP 1 Score: 286.6 bits (732), Expect = 1.6e-73
Identity = 153/192 (79.69%), Postives = 162/192 (84.38%), Query Frame = 0
Query: 1 MTSISQQTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKYK 60
M S+SQQTKENG M I YPML PHNYT+ TIK EAILD Q VW+AIE RG EVDVKK K
Sbjct: 1 MASVSQQTKENGRMPIFYPMLCPHNYTMWTIKTEAILDTQEVWEAIEPIRGLEVDVKKDK 60
Query: 61 KARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSELNVLRMKE 120
KA YILQCI +DVLL+IAKKK+A+EIWD+ KTRYLGSERVKMARV LKSE NVLRMKE
Sbjct: 61 KACVYILQCILEDVLLQIAKKKSAKEIWDNLKTRYLGSERVKMARVGILKSEFNVLRMKE 120
Query: 121 TETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMPF 180
TETIDEF GKIS L SKFTTL VALEDSSLVKKLLDSVPDKYL IV I+QFQDLETMPF
Sbjct: 121 TETIDEFAGKISKLASKFTTLGVALEDSSLVKKLLDSVPDKYLLIVTRIEQFQDLETMPF 180
Query: 181 EEAIGRMKAYEE 193
EE IGRM YEE
Sbjct: 181 EETIGRMMVYEE 192
BLAST of CSPI05G12750 vs. NCBI nr
Match:
XP_042450925.1 (uncharacterized protein LOC122035851 [Zingiber officinale])
HSP 1 Score: 276.9 bits (707), Expect = 1.3e-70
Identity = 143/193 (74.09%), Postives = 161/193 (83.42%), Query Frame = 0
Query: 1 MTSISQ-QTKENGGMSILYPMLTPHNYTVRTIKAEAILDVQGVWDAIELARGAEVDVKKY 60
M+ I Q KENGG+S YPML PHNYTV IK EAILD QGVW+ +E A GA+VD KK
Sbjct: 1 MSGIPQAAAKENGGVSFPYPMLNPHNYTVWAIKTEAILDAQGVWETVEPAEGAQVDAKKD 60
Query: 61 KKARAYILQCIPKDVLLKIAKKKTAQEIWDSHKTRYLGSERVKMARVQTLKSELNVLRMK 120
KKARAYILQC+P+D+LL+IA KKTA+E+WDS KTRYLGS+RVK ARVQTLKSE + LRMK
Sbjct: 61 KKARAYILQCVPEDILLQIANKKTAKEVWDSLKTRYLGSDRVKKARVQTLKSEFDALRMK 120
Query: 121 ETETIDEFIGKISGLVSKFTTLEVALEDSSLVKKLLDSVPDKYLSIVAEIKQFQDLETMP 180
ETETIDEF GK+S L SKF+TL LEDSSLVKKLLDSVPDK+ IVA I+QF DLETMP
Sbjct: 121 ETETIDEFAGKLSALSSKFSTLGATLEDSSLVKKLLDSVPDKFFPIVAGIEQFHDLETMP 180
Query: 181 FEEAIGRMKAYEE 193
FEEAIGR+KAYEE
Sbjct: 181 FEEAIGRLKAYEE 193
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5N6MA89 | 1.8e-54 | 59.24 | Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_33044 PE=3 SV=1 | [more] |
A0A5N6P849 | 2.0e-53 | 57.29 | Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_12633 PE=4 SV=1 | [more] |
A0A5N6NYJ8 | 2.6e-53 | 54.69 | CCHC-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_1635... | [more] |
Q0JH75 | 5.8e-53 | 57.98 | Os01g0879800 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0879800 PE... | [more] |
Q2QUP7 | 5.8e-53 | 57.98 | Laccase OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g15530 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |