CSPI05G12730 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G12730
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
LocationChr5: 12046489 .. 12047097 (-)
RNA-Seq ExpressionCSPI05G12730
SyntenyCSPI05G12730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGTAGGTATATGGAAAGGCCTACAACCATGCATTACAAGGTGGTCAAGCAAATACTTAGGTATTTGAGAGGGACAATTCATTTTGGGCTCAATTATACGAACGGTCCCAGAGAATTCAATATCTTCGGTTACTCTGACAGTGATTTAGCCGGTGATCTCGACGGGTGGAAAAACACAAGTGGAATGACATTCTACTTATACGAAAGCTTGGTTTCATGGAATTCGCAAAAGCAAAAGACGGTGGCACTCTCATCTTGCGAAGCCGAGTTCATTGCAGCCACTACCGCAGCTTGCCAAACATTGTGGTTAAGATACCTTGTTAGCGAGATAGTCGGAGTGGAGCCAAGGTCGGTAACATTATTTGTGGACAACAAATCCTCGATAGCTCTCATGAAGAATCCCGTATTTCATGGTCGCAGCAAGCACATAGATACACGTTTTCATTTCATTCGAGAGTGTGTCGAGAATGGACAAATTATCATTGAATTTGTCAACACTAGAGAACAACGAGCCGATGTTCTGACTAAAGCATTGACGGGAGTAAAGTTAGCTGCTATGCGTGAGCTACTTGGTGTTCGTAATTCAGAATCATGTCAGGATTAG

mRNA sequence

ATGGCGAGTAGGTATATGGAAAGGCCTACAACCATGCATTACAAGGTGGTCAAGCAAATACTTAGGTATTTGAGAGGGACAATTCATTTTGGGCTCAATTATACGAACGGTCCCAGAGAATTCAATATCTTCGGTTACTCTGACAGTGATTTAGCCGGTGATCTCGACGGGTGGAAAAACACAAGTGGAATGACATTCTACTTATACGAAAGCTTGGTTTCATGGAATTCGCAAAAGCAAAAGACGGTGGCACTCTCATCTTGCGAAGCCGAGTTCATTGCAGCCACTACCGCAGCTTGCCAAACATTGTGGTTAAGATACCTTGTTAGCGAGATAGTCGGAGTGGAGCCAAGGTCGGTAACATTATTTGTGGACAACAAATCCTCGATAGCTCTCATGAAGAATCCCGTATTTCATGGTCGCAGCAAGCACATAGATACACGTTTTCATTTCATTCGAGAGTGTGTCGAGAATGGACAAATTATCATTGAATTTGTCAACACTAGAGAACAACGAGCCGATGTTCTGACTAAAGCATTGACGGGAGTAAAGTTAGCTGCTATGCGTGAGCTACTTGGTGTTCGTAATTCAGAATCATGTCAGGATTAG

Coding sequence (CDS)

ATGGCGAGTAGGTATATGGAAAGGCCTACAACCATGCATTACAAGGTGGTCAAGCAAATACTTAGGTATTTGAGAGGGACAATTCATTTTGGGCTCAATTATACGAACGGTCCCAGAGAATTCAATATCTTCGGTTACTCTGACAGTGATTTAGCCGGTGATCTCGACGGGTGGAAAAACACAAGTGGAATGACATTCTACTTATACGAAAGCTTGGTTTCATGGAATTCGCAAAAGCAAAAGACGGTGGCACTCTCATCTTGCGAAGCCGAGTTCATTGCAGCCACTACCGCAGCTTGCCAAACATTGTGGTTAAGATACCTTGTTAGCGAGATAGTCGGAGTGGAGCCAAGGTCGGTAACATTATTTGTGGACAACAAATCCTCGATAGCTCTCATGAAGAATCCCGTATTTCATGGTCGCAGCAAGCACATAGATACACGTTTTCATTTCATTCGAGAGTGTGTCGAGAATGGACAAATTATCATTGAATTTGTCAACACTAGAGAACAACGAGCCGATGTTCTGACTAAAGCATTGACGGGAGTAAAGTTAGCTGCTATGCGTGAGCTACTTGGTGTTCGTAATTCAGAATCATGTCAGGATTAG

Protein sequence

MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKNTSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSVTLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKALTGVKLAAMRELLGVRNSESCQD*
Homology
BLAST of CSPI05G12730 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-34
Identity = 77/197 (39.09%), Postives = 126/197 (63.96%), Query Frame = 0

Query: 1    MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKN 60
            + SR++E P   H++ VK ILRYLRGT    L +  G  +  + GY+D+D+AGD+D  K+
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF--GGSDPILKGYTDADMAGDIDNRKS 1194

Query: 61   TSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 120
            ++G  F      +SW S+ QK VALS+ EAE+IAAT    + +WL+  + E+ G+  +  
Sbjct: 1195 STGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQEL-GLHQKEY 1254

Query: 121  TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 180
             ++ D++S+I L KN ++H R+KHID R+H+IRE V++  + +  ++T E  AD+LTK +
Sbjct: 1255 VVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVV 1314

Query: 181  TGVKLAAMRELLGVRNS 198
               K    +EL+G+ ++
Sbjct: 1315 PRNKFELCKELVGMHSN 1328

BLAST of CSPI05G12730 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 136.0 bits (341), Expect = 4.9e-31
Identity = 73/194 (37.63%), Postives = 118/194 (60.82%), Query Frame = 0

Query: 3    SRYMERPTTMHYKVVKQILRYLRGTIHFGLNY-TNGPREFNIFGYSDSDLAGDLDGWKNT 62
            SRY  +  +  ++ +K++LRYL+GTI   L +  N   E  I GY DSD AG     K+T
Sbjct: 1207 SRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKST 1266

Query: 63   SGMTFYLYE-SLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 122
            +G  F +++ +L+ WN+++Q +VA SS EAE++A   A  + LWL++L++ I       +
Sbjct: 1267 TGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPI 1326

Query: 123  TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 182
             ++ DN+  I++  NP  H R+KHID ++HF RE V+N  I +E++ T  Q AD+ TK L
Sbjct: 1327 KIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPL 1386

Query: 183  TGVKLAAMRELLGV 195
               +   +R+ LG+
Sbjct: 1387 PAARFVELRDKLGL 1400

BLAST of CSPI05G12730 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-29
Identity = 72/192 (37.50%), Postives = 107/192 (55.73%), Query Frame = 0

Query: 3    SRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKNTS 62
            S+YM  PT  H+  +K++LRYL GT   G+    G    ++  YSD+D AGD D + +T+
Sbjct: 1253 SQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKG-NTLSLHAYSDADWAGDTDDYVSTN 1312

Query: 63   GMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSVTL 122
            G   YL    +SW+S+KQK V  SS EAE+ +    + +  W+  L++E+         +
Sbjct: 1313 GYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVI 1372

Query: 123  FVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKALTG 182
            + DN  +  L  NPVFH R KHI   +HFIR  V++G + +  V+T +Q AD LTK L+ 
Sbjct: 1373 YCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSR 1432

Query: 183  VKLAAMRELLGV 195
            V        +GV
Sbjct: 1433 VAFQNFSRKIGV 1443

BLAST of CSPI05G12730 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.6e-29
Identity = 72/192 (37.50%), Postives = 108/192 (56.25%), Query Frame = 0

Query: 3    SRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKNTS 62
            S++M  PT  H + +K+ILRYL GT + G+    G    ++  YSD+D AGD D + +T+
Sbjct: 1270 SQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKG-NTLSLHAYSDADWAGDKDDYVSTN 1329

Query: 63   GMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSVTL 122
            G   YL    +SW+S+KQK V  SS EAE+ +    + +  W+  L++E+     R   +
Sbjct: 1330 GYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVI 1389

Query: 123  FVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKALTG 182
            + DN  +  L  NPVFH R KHI   +HFIR  V++G + +  V+T +Q AD LTK L+ 
Sbjct: 1390 YCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSR 1449

Query: 183  VKLAAMRELLGV 195
                     +GV
Sbjct: 1450 TAFQNFASKIGV 1460

BLAST of CSPI05G12730 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 43/103 (41.75%), Postives = 66/103 (64.08%), Query Frame = 0

Query: 3   SRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKNTS 62
           S++   P   H++ +K++LRYL+ T  +GL +T       + GYSD+D AGD++  ++TS
Sbjct: 32  SQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTRAGTA-KLVGYSDADWAGDVESRRSTS 91

Query: 63  GMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWL 106
           G  F L    VSW S+KQ+TVALSS E E++A + A  + +WL
Sbjct: 92  GYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEATQEAVWL 133

BLAST of CSPI05G12730 vs. ExPASy TrEMBL
Match: Q10RM4 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os03g05850 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 7.0e-73
Identity = 137/202 (67.82%), Postives = 165/202 (81.68%), Query Frame = 0

Query: 1    MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKN 60
            +ASR+MERPT MH+K VKQILRY++GT+ +GL Y  G     I GY+DSDLAGDLD  ++
Sbjct: 1208 VASRFMERPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKITGYTDSDLAGDLDDRRS 1267

Query: 61   TSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 120
            T GM FY+ +SLV+W+SQKQKTVALSSCEAEF+AATTAACQ LWLR L++E+ GVE ++V
Sbjct: 1268 TGGMAFYINQSLVAWSSQKQKTVALSSCEAEFMAATTAACQALWLRLLLAEVAGVEEKAV 1327

Query: 121  TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 180
             LFVDN+S+IALMKNPVFHGRSKHIDTR+HFIRECV+ GQI++EFV T EQRAD LTK L
Sbjct: 1328 KLFVDNRSAIALMKNPVFHGRSKHIDTRYHFIRECVDGGQIVVEFVRTEEQRADALTKGL 1387

Query: 181  TGVKLAAMRELLGVRNSESCQD 203
               KL   R LLGVR+  S Q+
Sbjct: 1388 PAAKLVTARHLLGVRSLGSRQN 1409

BLAST of CSPI05G12730 vs. ExPASy TrEMBL
Match: A0A6G1EJC3 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_014570 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.9e-70
Identity = 138/202 (68.32%), Postives = 163/202 (80.69%), Query Frame = 0

Query: 1   MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKN 60
           +ASR++ERPT MH+K VKQILRYL+G IH+GL Y+ G     I GY+DSDLAGDLD  K+
Sbjct: 118 VASRFIERPTVMHHKAVKQILRYLKGIIHYGLVYSKGGGAEVITGYTDSDLAGDLDDRKS 177

Query: 61  TSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 120
           T GM FY+ ESLV+W+SQKQ+TVALSSCEAEF+AAT AACQ LWLR L++E+   +PR V
Sbjct: 178 TGGMAFYVNESLVAWSSQKQRTVALSSCEAEFMAATAAACQALWLRSLLAELNKEQPRPV 237

Query: 121 TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 180
            +FVDNKS+IALMKNPVFHGRSKHIDTRFHFIRECVE GQI+++F+   EQRAD LTKAL
Sbjct: 238 KVFVDNKSAIALMKNPVFHGRSKHIDTRFHFIRECVEGGQIVVKFMRMEEQRADPLTKAL 297

Query: 181 TGVKLAAMRELLGVRNSESCQD 203
             VKL  MR LLGV +    QD
Sbjct: 298 PVVKLVTMRHLLGVCDLGPLQD 319

BLAST of CSPI05G12730 vs. ExPASy TrEMBL
Match: B8BDZ6 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30754 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.5e-70
Identity = 136/202 (67.33%), Postives = 162/202 (80.20%), Query Frame = 0

Query: 1    MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKN 60
            +ASR+MERPTTMH K VK ILRYL+GT+  GL + +G    +I G++DSDLAGD+D  ++
Sbjct: 1226 VASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRS 1285

Query: 61   TSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 120
            T GM FY+  SLVSW SQKQKTVALSSCEAEF+AAT AAC  LWLR L+SE++G E + V
Sbjct: 1286 TGGMAFYVNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKPV 1345

Query: 121  TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 180
             LFVDNKS+IALMKNPVFHGRSKHIDTR+HFIRECVE+GQI+IEFV++ EQRAD +TK L
Sbjct: 1346 KLFVDNKSAIALMKNPVFHGRSKHIDTRYHFIRECVESGQILIEFVSSEEQRADAMTKGL 1405

Query: 181  TGVKLAAMRELLGVRNSESCQD 203
               KLA  R LLGVR+    QD
Sbjct: 1406 PAAKLATARHLLGVRDLRPRQD 1427

BLAST of CSPI05G12730 vs. ExPASy TrEMBL
Match: Q0J8A6 (Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.2e-70
Identity = 136/202 (67.33%), Postives = 161/202 (79.70%), Query Frame = 0

Query: 1    MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKN 60
            +ASR+MERPTTMH K VK ILRYL+GT+  GL + +G    +I G++DSDLAGD+D  ++
Sbjct: 1226 VASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRS 1285

Query: 61   TSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 120
            T GM FY+  SLVSW SQKQKTVALSSCEAEF+AAT AAC  LWLR L+SE++G E + V
Sbjct: 1286 TGGMAFYVNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKRV 1345

Query: 121  TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 180
             LFVDNKS+IALMKNPVFHGRSKHIDTR+HFIRECVE+GQI+IEFV + EQRAD +TK L
Sbjct: 1346 KLFVDNKSAIALMKNPVFHGRSKHIDTRYHFIRECVESGQILIEFVRSEEQRADAMTKGL 1405

Query: 181  TGVKLAAMRELLGVRNSESCQD 203
               KLA  R LLGVR+    QD
Sbjct: 1406 PAAKLATARHLLGVRDLRPRQD 1427

BLAST of CSPI05G12730 vs. ExPASy TrEMBL
Match: A0A0P0XB91 (Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.2e-70
Identity = 136/202 (67.33%), Postives = 161/202 (79.70%), Query Frame = 0

Query: 1    MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKN 60
            +ASR+MERPTTMH K VK ILRYL+GT+  GL + +G    +I G++DSDLAGD+D  ++
Sbjct: 1226 VASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRS 1285

Query: 61   TSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 120
            T GM FY+  SLVSW SQKQKTVALSSCEAEF+AAT AAC  LWLR L+SE++G E + V
Sbjct: 1286 TGGMAFYVNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKRV 1345

Query: 121  TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 180
             LFVDNKS+IALMKNPVFHGRSKHIDTR+HFIRECVE+GQI+IEFV + EQRAD +TK L
Sbjct: 1346 KLFVDNKSAIALMKNPVFHGRSKHIDTRYHFIRECVESGQILIEFVRSEEQRADAMTKGL 1405

Query: 181  TGVKLAAMRELLGVRNSESCQD 203
               KLA  R LLGVR+    QD
Sbjct: 1406 PAAKLATARHLLGVRDLRPRQD 1427

BLAST of CSPI05G12730 vs. NCBI nr
Match: XP_031741734.1 (uncharacterized protein LOC116403928 [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 2.9e-97
Identity = 182/202 (90.10%), Postives = 191/202 (94.55%), Query Frame = 0

Query: 1   MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKN 60
           MASRY+ERPTTMHYKVVKQIL YLRGTIHFGL YT GPREFNIFGYSDSDLAGDLDG K+
Sbjct: 197 MASRYIERPTTMHYKVVKQILGYLRGTIHFGLTYTKGPREFNIFGYSDSDLAGDLDGRKS 256

Query: 61  TSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 120
           TSGMTFYL ESLVSWNSQKQKTVALSSCEAEFIAATTAACQ LWLR LVSEIV +EPR +
Sbjct: 257 TSGMTFYLNESLVSWNSQKQKTVALSSCEAEFIAATTAACQALWLRCLVSEIVRMEPRPI 316

Query: 121 TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 180
           TLFVDNKS+IALMKNPVFHGR+KHIDTRFHFIRECVENGQII+EFVNT EQRADVLTKAL
Sbjct: 317 TLFVDNKSAIALMKNPVFHGRNKHIDTRFHFIRECVENGQIIVEFVNTGEQRADVLTKAL 376

Query: 181 TGVKLAAMRELLGVRNSESCQD 203
           TGVKLAAMR+LLGVRN ESCQ+
Sbjct: 377 TGVKLAAMRQLLGVRNLESCQN 398

BLAST of CSPI05G12730 vs. NCBI nr
Match: XP_031745072.1 (secreted RxLR effector protein 161-like [Cucumis sativus])

HSP 1 Score: 362.1 bits (928), Expect = 3.2e-96
Identity = 181/202 (89.60%), Postives = 188/202 (93.07%), Query Frame = 0

Query: 1   MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKN 60
           MASRYMERPTTMHYKVVKQILRYLRGTIHFGL YT GPREFNIFGYSDSDLAGDLDG K+
Sbjct: 55  MASRYMERPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFNIFGYSDSDLAGDLDGRKS 114

Query: 61  TSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 120
           TSGMTFYL ESLVSWNSQKQKTVALSSCE EFIA TTAACQ LWLR LVSEIVG+EPR V
Sbjct: 115 TSGMTFYLNESLVSWNSQKQKTVALSSCEVEFIATTTAACQALWLRCLVSEIVGMEPRPV 174

Query: 121 TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 180
           TLFVDNKS+IALMKNPVFHGRSKHIDT FHFIRECV+NGQII+E VNT EQRADVLTKAL
Sbjct: 175 TLFVDNKSAIALMKNPVFHGRSKHIDTCFHFIRECVKNGQIIVEVVNTGEQRADVLTKAL 234

Query: 181 TGVKLAAMRELLGVRNSESCQD 203
           TGVKLAAMR+LLGVRN E CQ+
Sbjct: 235 TGVKLAAMRQLLGVRNLEPCQN 256

BLAST of CSPI05G12730 vs. NCBI nr
Match: KAG6472693.1 (hypothetical protein ZIOFF_070170 [Zingiber officinale])

HSP 1 Score: 344.4 bits (882), Expect = 6.9e-91
Identity = 168/202 (83.17%), Postives = 185/202 (91.58%), Query Frame = 0

Query: 1   MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKN 60
           M SRYME+PT+MH+KVVKQILRYL+GTI+FGL YT GP+E NIFGYSDSDLAGDLDG K+
Sbjct: 387 MTSRYMEKPTSMHHKVVKQILRYLKGTIYFGLAYTKGPQEINIFGYSDSDLAGDLDGRKS 446

Query: 61  TSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 120
           TSGMTFY  ESLVSWNSQKQKTVALSSCEAEF+AATTAACQ LWLR LVSE+ G EP+ V
Sbjct: 447 TSGMTFYFNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWLRSLVSELTGEEPKPV 506

Query: 121 TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 180
           TLFVDNKS+IALMKNPVFHGRSKHIDTRFHFIRECVENGQI++EF+NT EQRADVLTKAL
Sbjct: 507 TLFVDNKSAIALMKNPVFHGRSKHIDTRFHFIRECVENGQIVVEFINTGEQRADVLTKAL 566

Query: 181 TGVKLAAMRELLGVRNSESCQD 203
            GVKLA MR+LLGVR+ E CQ+
Sbjct: 567 PGVKLAVMRQLLGVRDLEPCQN 588

BLAST of CSPI05G12730 vs. NCBI nr
Match: KAG6474529.1 (hypothetical protein ZIOFF_068466 [Zingiber officinale])

HSP 1 Score: 341.3 bits (874), Expect = 5.8e-90
Identity = 166/202 (82.18%), Postives = 183/202 (90.59%), Query Frame = 0

Query: 1   MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKN 60
           MASRYMERPTTMH+KVVKQILRYL+GTIHFGL Y  GP+E +IFGYSDSDLAGDLDG K+
Sbjct: 98  MASRYMERPTTMHHKVVKQILRYLKGTIHFGLTYIKGPQEISIFGYSDSDLAGDLDGRKS 157

Query: 61  TSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 120
           TSGMTFY  ESLVSWNSQKQKTVALSSCEAEF+AATTAAC  LWLR L SE+ G +P+ V
Sbjct: 158 TSGMTFYFNESLVSWNSQKQKTVALSSCEAEFMAATTAACHALWLRSLTSELTGEKPKPV 217

Query: 121 TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 180
           TLFVDNKS+IALMKNPVFHGRSKHIDTRFHFIRECVENGQI++EF+NT EQRADVLTKAL
Sbjct: 218 TLFVDNKSAIALMKNPVFHGRSKHIDTRFHFIRECVENGQIMVEFINTGEQRADVLTKAL 277

Query: 181 TGVKLAAMRELLGVRNSESCQD 203
            GVKLA MR+LLG+R+ E CQ+
Sbjct: 278 PGVKLAVMRQLLGIRDLEPCQN 299

BLAST of CSPI05G12730 vs. NCBI nr
Match: KAG6507891.1 (hypothetical protein ZIOFF_033244 [Zingiber officinale])

HSP 1 Score: 340.9 bits (873), Expect = 7.6e-90
Identity = 166/202 (82.18%), Postives = 182/202 (90.10%), Query Frame = 0

Query: 1   MASRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKN 60
           MASRYMERPTTMH+KVVKQILRYL+GTIHFGL Y  GP+E +IFGYSDSDLAGDLDG K+
Sbjct: 444 MASRYMERPTTMHHKVVKQILRYLKGTIHFGLAYIKGPQEISIFGYSDSDLAGDLDGRKS 503

Query: 61  TSGMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSV 120
           TSGMTFY  ESLVSWNSQKQKTVALSSCEAEF+AATTAAC  LWLR L SE+ G +P+ +
Sbjct: 504 TSGMTFYFNESLVSWNSQKQKTVALSSCEAEFMAATTAACHALWLRSLTSELTGEKPKPI 563

Query: 121 TLFVDNKSSIALMKNPVFHGRSKHIDTRFHFIRECVENGQIIIEFVNTREQRADVLTKAL 180
           TLFVDNKS+IALMKNPVFHGRSKHIDTRFHFIRECVE GQI++EF NT EQRADVLTKAL
Sbjct: 564 TLFVDNKSAIALMKNPVFHGRSKHIDTRFHFIRECVEKGQIVVEFFNTGEQRADVLTKAL 623

Query: 181 TGVKLAAMRELLGVRNSESCQD 203
            GVKLA MR+LLG+R+ ESCQD
Sbjct: 624 PGVKLATMRQLLGIRDLESCQD 645

BLAST of CSPI05G12730 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 98.6 bits (244), Expect = 6.1e-21
Identity = 54/152 (35.53%), Postives = 87/152 (57.24%), Query Frame = 0

Query: 3   SRYMERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKNTS 62
           S++ E P   H + V +IL Y++GT+  GL Y++   E  +  +SD+      D  ++T+
Sbjct: 403 SQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS-QAEMQLQVFSDASFQSCKDTRRSTN 462

Query: 63  GMTFYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLWLRYLVSEIVGVEPRSVTL 122
           G   +L  SL+SW S+KQ+ V+ SS EAE+ A + A  + +WL     E+     +   L
Sbjct: 463 GYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLL 522

Query: 123 FVDNKSSIALMKNPVFHGRSKHIDTRFHFIRE 155
           F DN ++I +  N VFH R+KHI++  H +RE
Sbjct: 523 FCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

BLAST of CSPI05G12730 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 34/99 (34.34%), Postives = 59/99 (59.60%), Query Frame = 0

Query: 6   MERPTTMHYKVVKQILRYLRGTIHFGLNYTNGPREFNIFGYSDSDLAGDLDGWKNTSGMT 65
           M  PT   + ++K++LRY++GTI  GL Y +   + N+  + DSD AG     ++T+G  
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGL-YIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFC 187

Query: 66  FYLYESLVSWNSQKQKTVALSSCEAEFIAATTAACQTLW 105
            +L  +++SW++++Q TV+ SS E E+ A    A +  W
Sbjct: 188 TFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P109781.6e-3439.09Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041464.9e-3137.63Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT942.1e-2937.50Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW24.6e-2937.50Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P0CV721.3e-1541.75Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
Match NameE-valueIdentityDescription
Q10RM47.0e-7367.82Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ... [more]
A0A6G1EJC31.9e-7068.32Reverse transcriptase Ty1/copia-type domain-containing protein OS=Oryza meyerian... [more]
B8BDZ62.5e-7067.33Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30754 PE=4... [more]
Q0J8A63.2e-7067.33Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE... [more]
A0A0P0XB913.2e-7067.33Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE... [more]
Match NameE-valueIdentityDescription
XP_031741734.12.9e-9790.10uncharacterized protein LOC116403928 [Cucumis sativus][more]
XP_031745072.13.2e-9689.60secreted RxLR effector protein 161-like [Cucumis sativus][more]
KAG6472693.16.9e-9183.17hypothetical protein ZIOFF_070170 [Zingiber officinale][more]
KAG6474529.15.8e-9082.18hypothetical protein ZIOFF_068466 [Zingiber officinale][more]
KAG6507891.17.6e-9082.18hypothetical protein ZIOFF_033244 [Zingiber officinale][more]
Match NameE-valueIdentityDescription
AT4G23160.16.1e-2135.53cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.12.6e-1134.34DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 59..197
NoneNo IPR availablePANTHERPTHR11439:SF355CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8coord: 59..197
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 45..182
e-value: 8.05658E-74
score: 217.336

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G12730.1CSPI05G12730.1mRNA