CSPI05G12420 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAATTACGAAATAAATATTGAGAGAGAGAGGCGAAGGAGTAGACTAGATTCTCGCTTAATTTGCATTGCACCAAAATCAGACACAAAACCACAAGGGAGGCAGAGAGAGACACACAAGAAAGCTTCAAGAGAAAACGAATGGAAACTGTCGAACCTTCCAATTCCCGCAAGTATGGCGTTCCTTTCTATGCTGCCGCTTGGCTTCCTTCAGCTTCTCTCCAATCCAAACACCAACCTTCACAATCTCAAGATCCTCCACATCAATCCCCTGATCCTGACATTTCCTCCGCCGACAACAAATCAGTTCCATCTCATCCCGCCAGTTACTACGTAACTGCCGCTGGCGGTGGCGGAGAAGGTCGGAGTGGGATTTCCAATGCCCTCATACTCGCTCATTTCGATTTTGAATCCCGCTCGCTCTCTGATCACCCTGTAAACTCTCTCTCCCTCTCTGTTCTTCCCTGATTATTTCTATGATTGTCGTTGTTTGTCATTTTGTCTATGTTATTGAGTGAAGGAGAAATGGGGGCGGGTTATAATTTTGTCTTTGGATTGTTGATTCTCTTGCTTACCCGAAGGTTTCTTTAATTTTATTATCCTGTTTGTTTTGGTGATTTCTTTTTCACATGTGTATCGAAATTTGAATTGGGTGAAAATCTGAAAATCTAGGGTGTTGCCTACTTACATTGATTTTGCCATCTCAAATCTCCCGGCAGCATAATTGTCCCACACTGTCTTGCGGTTCTGGTGGTTGACCCTGTGATTTTACACTACATTTTGATGTTCTTTATTTATTATTTTTTTTAAAGAGGAAATGTGAAATTTATGTTAGCAAAGTGATGAACTGTTACAAATTATGAAGTTAAGATATCTTCGTAGTGTAGCCCCGAAGACAACAAAGGTTCTCTCTGATTTCAAATTGGCTTCGGTACATCAAGAAGAAGCAATAGAATTAATAAGGTCTTTGTTACATTTTATGATTTAATAAAAGCCTATACATCCTTGGTTCTTTTGAAAACTCTCCTATTCCTCCCTAACATACACAACTATGAAATAGCCAAGCAAGCATTAAAAGTATCTTGATATCTCTAAAAGAATGATCAAGGATCATTTGGGAGATGTATGTTCAATGCTTTATACGGATCGCTATCTGACTATTTAAATTGCTCAAGAGATCAGACGATGTTACTTGAACATGATTTGTTCTAGAGGTTGTACAATTGTGTTCTTGAGTTCTATAGTTCATTCCAACATCATTTCTTTGCTAATATATAATTTCTGTCTTGGTGAGTAAACACCTCCCATTCTATTTTCCCACCATGGTACTTTATTTTGTTGTTGTTTTGTCTATGGTTTGGTTCTGCTTACTTTCTATGCTTATAGTGTCTTTGTAATTTGAGCATTAGCATAGAAAATAAATATAATCAAACTGTTTGCTTATTTCCTTCTATTCTTCCACCAGCTGATACCTTCTTGCAAATGAATGAAGTTAACAGTACATTTGGCTATTACCATCAAATCCATTATCCTTGGCTAAAACGATTGAGCTTTTGGATTAATGCCATCAAGGCTATCATTTCCCAGGATAGGTTTGAAAAAAATCAGAGATCTTGTTAAGATGAGCATTTAGCTTGTGTCAAGATTAAACTTCTCATTGGTGTTCTCTTTCTCCTTTATTTTCAAATGACTCTTTTAATGATATTTGTTTAAAATTTTGTTAGTTATTATGAGGAGCTCTCTTTCCCCCATGGCCTTAGGTTATTTCTCTCTTTTTTATTTTTATTTATTTATTTATTTATAATTTGTCAGTGTTCTTATACTAAAAGTGATCTTTATATGAATTGCAATAGTGGGGGGCTTTCATATCCCTCATTAATTTGTTTGTTATTTTCACTCTCAATGGTAGCTCATATGCATGGACATTTTTAAGTATATTTTTTGCTATTCCGTGATATCTTTTGTTATCATTTTGCATTTTTCCCCCTCATTTCATTTTATTCCTTGTGTGCGCTAATTAGTCCACTTATCCTTCCAGGTTGCAAAATATGGAACTGGTTCTGATTTGCCGTACAGAATGGCTATTCATCCAGCTGGAGATGGAATTATTTGTTCTCTACCAAAAAGTTGCAGGTATTACCATTTCCTTTGTTAACTCCACAGCAAATCAATATGAACTGTTGATGAGGATCATAGTTCTTTCTTGGATGAACCTTCAAGTCTCAATATGCTAGTAAATGTTTTAGGTAGGCAAATATGGTTATACATATAAGAAATGTGATTTATATTCATGAAAAGTGAAAAAAAAGAAAGAAAAAAGAAATGAAAAAAAAGTAGAAAAACAGCCTAAGGGCAGGGGGGTGTTAAACCCCCTCCCACAAAACTGTTTGATATGTTATGGCATAGAATAAGAAGTTCCAGTAATTTGATGTGTTAGATCCATGTTTCTCACATTAAGGTCCTCCAACAGGCGCCATTTTGTGAAGGATGAAATATGACTGGTTAACTTGTCAATTGAGAAATAAGATTGGAGTATAATACTTTCAATCTTGAAATAAATTTGCACGTTCCTTGGTCTATTTTAATTCTATCAATGAAGTATTGACTTTTTTATTTTTTTATTATTTTATTTAGAAAAGAAAAGATTATTTAACTGCAATGTATAGTCATATCGTGTGGTTAATTTGATTGAGCCATCTATTATACCACTGTGTAACTTGAGAAGTGTTGATTTTTAATTAATATTCTGCTCACTTTATTTAGCCTGTTTAAAGTGGATACTGAGAAGGATGCTGGAGATGAGACACTTGGACTAAAACTCTCTCAGGAGGTCCTCAGCCCCTTGGAAGATGTTGGACAGCAGTTATCATTGGCATTTAACAACGAGGGCTCTTTGCTTGCCACTGGTGGTGAGGTAGGAAATTTGAAGATTTGATTGCTTACTATTACTATTATTTCTTTTGGATAGGAAAACAATTTTTTATCCACCCATAATTTAAACTTTGAGAAGGGTGAAGGCAAGGTACTCTCCAGGCAAGCAAAAGGAGCTTACAAATTCAATCTTAATGTTTATTGCCAATGCATTTCTCAACTTACTAGCCGTTTCTAACCCTAGACCTTTTCTATAATGTCATTTTTCTCTTGAAATAAATACCAATTTCCACTTATTGGACTTTTGACAAATTTCCAAGCCCATAAGTGATAGTGTTCAAATATTAACATAATATGACTTCAAGTTTTTTTTTGTTTTTGGGTTGAATGGTGATTTAACACATTGGTTAAATACTATAGGATGCTCGATAATTATTGAGAAGTAGCTTGCATTATTGTTTTCTGATTTGAATACAGTACAGGATGGCAATTTAAGGGTCTTAAAGTGGCCTAGCTTGGACATTGTTCTCAATGAGCCCAGTTCCCATTCTTCGGTCAAGGACTTGGATTTCAGGTCTGCAATGTTATAAATTATTTTTCTTGATAGCTCTTGCATATGTTAGACAATATGATATGTGTATGTTGTTTGTTTATCTAAAGTCTCTTGTGTAATGAAGTTATTGTGATAGCTGTCATTTTATTTTTGCAGTCCTGATGGCAAATATCTTGTCTCCTTAGGTGGCCCTTGTAGAGTGTGGGATATAACTTCATCGACTTTAGTAACCTCTCTTCCGAAAGAAAATGTGAGCAAATAG AAAATTACGAAATAAATATTGAGAGAGAGAGGCGAAGGAGTAGACTAGATTCTCGCTTAATTTGCATTGCACCAAAATCAGACACAAAACCACAAGGGAGGCAGAGAGAGACACACAAGAAAGCTTCAAGAGAAAACGAATGGAAACTGTCGAACCTTCCAATTCCCGCAAGTATGGCGTTCCTTTCTATGCTGCCGCTTGGCTTCCTTCAGCTTCTCTCCAATCCAAACACCAACCTTCACAATCTCAAGATCCTCCACATCAATCCCCTGATCCTGACATTTCCTCCGCCGACAACAAATCAGTTCCATCTCATCCCGCCAGTTACTACGTAACTGCCGCTGGCGGTGGCGGAGAAGGTCGGAGTGGGATTTCCAATGCCCTCATACTCGCTCATTTCGATTTTGAATCCCGCTCGCTCTCTGATCACCCTGTTGCAAAATATGGAACTGGTTCTGATTTGCCGTACAGAATGGCTATTCATCCAGCTGGAGATGGAATTATTTGTTCTCTACCAAAAAGTTGCAGCCTGTTTAAAGTGGATACTGAGAAGGATGCTGGAGATGAGACACTTGGACTAAAACTCTCTCAGGAGGTCCTCAGCCCCTTGGAAGATGTTGGACAGCAGTTATCATTGGCATTTAACAACGAGGGCTCTTTGCTTGCCACTGGTGGTGAGGATGGCAATTTAAGGGTCTTAAAGTGGCCTAGCTTGGACATTGTTCTCAATGAGCCCAGTTCCCATTCTTCGGTCAAGGACTTGGATTTCAGTCCTGATGGCAAATATCTTGTCTCCTTAGGTGGCCCTTGTAGAGTGTGGGATATAACTTCATCGACTTTAGTAACCTCTCTTCCGAAAGAAAATGTGAGCAAATAG ATGGAAACTGTCGAACCTTCCAATTCCCGCAAGTATGGCGTTCCTTTCTATGCTGCCGCTTGGCTTCCTTCAGCTTCTCTCCAATCCAAACACCAACCTTCACAATCTCAAGATCCTCCACATCAATCCCCTGATCCTGACATTTCCTCCGCCGACAACAAATCAGTTCCATCTCATCCCGCCAGTTACTACGTAACTGCCGCTGGCGGTGGCGGAGAAGGTCGGAGTGGGATTTCCAATGCCCTCATACTCGCTCATTTCGATTTTGAATCCCGCTCGCTCTCTGATCACCCTGTTGCAAAATATGGAACTGGTTCTGATTTGCCGTACAGAATGGCTATTCATCCAGCTGGAGATGGAATTATTTGTTCTCTACCAAAAAGTTGCAGCCTGTTTAAAGTGGATACTGAGAAGGATGCTGGAGATGAGACACTTGGACTAAAACTCTCTCAGGAGGTCCTCAGCCCCTTGGAAGATGTTGGACAGCAGTTATCATTGGCATTTAACAACGAGGGCTCTTTGCTTGCCACTGGTGGTGAGGATGGCAATTTAAGGGTCTTAAAGTGGCCTAGCTTGGACATTGTTCTCAATGAGCCCAGTTCCCATTCTTCGGTCAAGGACTTGGATTTCAGTCCTGATGGCAAATATCTTGTCTCCTTAGGTGGCCCTTGTAGAGTGTGGGATATAACTTCATCGACTTTAGTAACCTCTCTTCCGAAAGAAAATGTGAGCAAATAG METVEPSNSRKYGVPFYAAAWLPSASLQSKHQPSQSQDPPHQSPDPDISSADNKSVPSHPASYYVTAAGGGGEGRSGISNALILAHFDFESRSLSDHPVAKYGTGSDLPYRMAIHPAGDGIICSLPKSCSLFKVDTEKDAGDETLGLKLSQEVLSPLEDVGQQLSLAFNNEGSLLATGGEDGNLRVLKWPSLDIVLNEPSSHSSVKDLDFSPDGKYLVSLGGPCRVWDITSSTLVTSLPKENVSK* Homology
BLAST of CSPI05G12420 vs. ExPASy Swiss-Prot
Match: Q39221 (SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4) HSP 1 Score: 231.1 bits (588), Expect = 1.4e-59 Identity = 123/241 (51.04%), Postives = 156/241 (64.73%), Query Frame = 0
BLAST of CSPI05G12420 vs. ExPASy Swiss-Prot
Match: Q8GYE0 (SEC12-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PHF1 PE=1 SV=2) HSP 1 Score: 108.6 bits (270), Expect = 1.0e-22 Identity = 59/159 (37.11%), Postives = 94/159 (59.12%), Query Frame = 0
BLAST of CSPI05G12420 vs. ExPASy Swiss-Prot
Match: Q9HCU5 (Prolactin regulatory element-binding protein OS=Homo sapiens OX=9606 GN=PREB PE=1 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 3.1e-11 Identity = 62/212 (29.25%), Postives = 92/212 (43.40%), Query Frame = 0
BLAST of CSPI05G12420 vs. ExPASy Swiss-Prot
Match: Q9WUQ2 (Prolactin regulatory element-binding protein OS=Mus musculus OX=10090 GN=Preb PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 8.9e-11 Identity = 58/217 (26.73%), Postives = 90/217 (41.47%), Query Frame = 0
BLAST of CSPI05G12420 vs. ExPASy Swiss-Prot
Match: Q9WTV0 (Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2) HSP 1 Score: 68.6 bits (166), Expect = 1.2e-10 Identity = 62/217 (28.57%), Postives = 91/217 (41.94%), Query Frame = 0
BLAST of CSPI05G12420 vs. ExPASy TrEMBL
Match: A0A0A0KMF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G286090 PE=4 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 4.6e-135 Identity = 242/245 (98.78%), Postives = 243/245 (99.18%), Query Frame = 0
BLAST of CSPI05G12420 vs. ExPASy TrEMBL
Match: A0A5A7VE72 (SEC12-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00330 PE=4 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124 Identity = 224/242 (92.56%), Postives = 231/242 (95.45%), Query Frame = 0
BLAST of CSPI05G12420 vs. ExPASy TrEMBL
Match: A0A1S3C056 (SEC12-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103495101 PE=4 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124 Identity = 224/242 (92.56%), Postives = 231/242 (95.45%), Query Frame = 0
BLAST of CSPI05G12420 vs. ExPASy TrEMBL
Match: A0A6J1FTE5 (SEC12-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111447960 PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 1.7e-105 Identity = 199/246 (80.89%), Postives = 217/246 (88.21%), Query Frame = 0
BLAST of CSPI05G12420 vs. ExPASy TrEMBL
Match: A0A6J1J4E0 (SEC12-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111483300 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 3.2e-104 Identity = 197/246 (80.08%), Postives = 215/246 (87.40%), Query Frame = 0
BLAST of CSPI05G12420 vs. NCBI nr
Match: XP_004140431.1 (SEC12-like protein 2 [Cucumis sativus] >KGN50716.2 hypothetical protein Csa_004731 [Cucumis sativus]) HSP 1 Score: 485.3 bits (1248), Expect = 3.0e-133 Identity = 239/242 (98.76%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of CSPI05G12420 vs. NCBI nr
Match: XP_008454782.1 (PREDICTED: SEC12-like protein 2 [Cucumis melo]) HSP 1 Score: 455.7 bits (1171), Expect = 2.6e-124 Identity = 224/242 (92.56%), Postives = 231/242 (95.45%), Query Frame = 0
BLAST of CSPI05G12420 vs. NCBI nr
Match: KAA0065998.1 (SEC12-like protein 2 [Cucumis melo var. makuwa] >TYK28946.1 SEC12-like protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 455.7 bits (1171), Expect = 2.6e-124 Identity = 224/242 (92.56%), Postives = 231/242 (95.45%), Query Frame = 0
BLAST of CSPI05G12420 vs. NCBI nr
Match: XP_038892140.1 (SEC12-like protein 2 [Benincasa hispida]) HSP 1 Score: 408.7 bits (1049), Expect = 3.6e-110 Identity = 202/245 (82.45%), Postives = 220/245 (89.80%), Query Frame = 0
BLAST of CSPI05G12420 vs. NCBI nr
Match: KAG6599876.1 (SEC12-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 394.8 bits (1013), Expect = 5.4e-106 Identity = 199/246 (80.89%), Postives = 218/246 (88.62%), Query Frame = 0
BLAST of CSPI05G12420 vs. TAIR 10
Match: AT2G01470.1 (SEC12P-like 2 protein ) HSP 1 Score: 231.1 bits (588), Expect = 9.6e-61 Identity = 123/241 (51.04%), Postives = 156/241 (64.73%), Query Frame = 0
BLAST of CSPI05G12420 vs. TAIR 10
Match: AT5G50550.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 214.2 bits (544), Expect = 1.2e-55 Identity = 114/239 (47.70%), Postives = 151/239 (63.18%), Query Frame = 0
BLAST of CSPI05G12420 vs. TAIR 10
Match: AT5G50650.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 214.2 bits (544), Expect = 1.2e-55 Identity = 114/239 (47.70%), Postives = 151/239 (63.18%), Query Frame = 0
BLAST of CSPI05G12420 vs. TAIR 10
Match: AT3G52190.1 (phosphate transporter traffic facilitator1 ) HSP 1 Score: 108.6 bits (270), Expect = 7.2e-24 Identity = 59/159 (37.11%), Postives = 94/159 (59.12%), Query Frame = 0
BLAST of CSPI05G12420 vs. TAIR 10
Match: AT2G37160.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 47.0 bits (110), Expect = 2.6e-05 Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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