CSPI05G11680 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G11680
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionubiquinol-cytochrome c reductase complex 6.7 kDa protein
LocationChr5: 10296838 .. 10297153 (+)
RNA-Seq ExpressionCSPI05G11680
SyntenyCSPI05G11680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGACGGGTGAAAAGGGTTTGTTGAAGTTCCTCCATCCAAGGCTCAGGAATGTCCTACATCCCATCAACATTGAAGCTGCTGCGTTATGGAGTGTTGCTGGGATAGCCACTGCTCTTTGGCTTGTACAGGTATTGGTCCTTCTTTTCTTTTCATCTACCAGCATGTTTCTGTTTGTTCAATGCTATTTGTGAAAGATCGTAACTATTCTTCTCGTCTTGTAACTGAAAAACATGGCAGCCATTTGACTGGTTGAAGAAGAAGGTTTGGGCGGTAGAGGAGAAAGGAGAAAGCGGGGTGCAAACTAATGAATAA

mRNA sequence

ATGAAGACGGGTGAAAAGGGTTTGTTGAAGTTCCTCCATCCAAGGCTCAGGAATGTCCTACATCCCATCAACATTGAAGCTGCTGCGTTATGGAGTGTTGCTGGGATAGCCACTGCTCTTTGGCTTGTACAGCCATTTGACTGGTTGAAGAAGAAGGTTTGGGCGGTAGAGGAGAAAGGAGAAAGCGGGGTGCAAACTAATGAATAA

Coding sequence (CDS)

ATGAAGACGGGTGAAAAGGGTTTGTTGAAGTTCCTCCATCCAAGGCTCAGGAATGTCCTACATCCCATCAACATTGAAGCTGCTGCGTTATGGAGTGTTGCTGGGATAGCCACTGCTCTTTGGCTTGTACAGCCATTTGACTGGTTGAAGAAGAAGGTTTGGGCGGTAGAGGAGAAAGGAGAAAGCGGGGTGCAAACTAATGAATAA

Protein sequence

MKTGEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKGESGVQTNE*
Homology
[Close]
BLAST of CSPI05G11680 vs. ExPASy Swiss-Prot
Match: P48505 (Ubiquinol-cytochrome c reductase complex 6.7 kDa protein OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-05
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0 

Query: 7  GLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKK 52
          GL KFL P+LR      +I+AAA W VA +  ALW++QP+D+L+K
Sbjct: 10 GLFKFLRPKLRP--QSTDIQAAAGWGVAAVTGALWVIQPWDFLRK 52

[Close]
BLAST of CSPI05G11680 vs. ExPASy Swiss-Prot
Match: Q94K78 (Cytochrome b-c1 complex subunit 10, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UCRY PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-05
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 0 

Query: 4  GEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKK 52
          G  GLL  + P+++     I+I+AAA W +A  A A+W+VQPF W+KK
Sbjct: 3  GTSGLLNAVKPKIQT----IDIQAAAGWGIAAAAGAIWVVQPFGWIKK 46

[Close]
BLAST of CSPI05G11680 vs. ExPASy TrEMBL
Match: A0A0A0KSL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G223090 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.2e-31
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MKTGEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKG 60
          MKTGEKGLLKFLHP+LRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKG
Sbjct: 1  MKTGEKGLLKFLHPKLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKG 60

Query: 61 ESGVQTNE 69
          ESGVQTNE
Sbjct: 61 ESGVQTNE 68

[Close]
BLAST of CSPI05G11680 vs. ExPASy TrEMBL
Match: A0A6J1JMA0 (ubiquinol-cytochrome c reductase complex 6.7 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111485942 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.7e-24
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 1  MKTGEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKG 60
          M TGEKGLLKFL P+LRN LHPINIEAA LWSVAG ATALWLVQPFDWLKKK+W VEEK 
Sbjct: 16 MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKT 75

Query: 61 ESGVQTNE 69
          E  VQ++E
Sbjct: 76 EDKVQSDE 83

[Close]
BLAST of CSPI05G11680 vs. ExPASy TrEMBL
Match: A0A5A7VG06 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00230 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.4e-19
Identity = 57/105 (54.29%), Postives = 60/105 (57.14%), Query Frame = 0 

Query: 1   MKTGEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLV----------------- 60
           MKTGEKGLLKFLHP+LRN+LHPINIEA ALWSVAG ATA  L                  
Sbjct: 1   MKTGEKGLLKFLHPKLRNLLHPINIEAVALWSVAGTATAFGLYRYSSLASPTLFFSSTSM 60

Query: 61  --------------------QPFDWLKKKVWAVEEKGESGVQTNE 69
                               QPFDWLKKKVW VEEK E+ VQTNE
Sbjct: 61  FLFVVKNRNYSYRLETEKTWQPFDWLKKKVWKVEEKEENEVQTNE 105

[Close]
BLAST of CSPI05G11680 vs. ExPASy TrEMBL
Match: A0A5D2MEA8 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A13G009000v1 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-08
Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 0 

Query: 4  GEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKK 52
          GE  + KFL PRLR   HPI+I+AAA W VA   TALWL+QPFDWLK+
Sbjct: 3  GEGSMFKFLKPRLRP--HPIDIQAAAAWGVAASTTALWLIQPFDWLKR 48

[Close]
BLAST of CSPI05G11680 vs. ExPASy TrEMBL
Match: A0A7J9FBL1 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_000248 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-08
Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 0 

Query: 4  GEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKGE 62
          GE  + KFL PRLR    PI+I+AAA W VA   TALWL+QPFDWLKK      +K E
Sbjct: 3  GEGSMFKFLKPRLRP--QPIDIQAAAAWGVAATTTALWLIQPFDWLKKTFLEKPDKSE 58

[Close]
BLAST of CSPI05G11680 vs. NCBI nr
Match: KGN50751.1 (hypothetical protein Csa_005826 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 4.6e-31
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MKTGEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKG 60
          MKTGEKGLLKFLHP+LRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKG
Sbjct: 1  MKTGEKGLLKFLHPKLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKG 60

Query: 61 ESGVQTNE 69
          ESGVQTNE
Sbjct: 61 ESGVQTNE 68

[Close]
BLAST of CSPI05G11680 vs. NCBI nr
Match: XP_022988689.1 (ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Cucurbita maxima])

HSP 1 Score: 119.0 bits (297), Expect = 1.6e-23
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 1  MKTGEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKG 60
          M TGEKGLLKFL P+LRN LHPINIEAA LWSVAG ATALWLVQPFDWLKKK+W VEEK 
Sbjct: 16 MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKT 75

Query: 61 ESGVQTNE 69
          E  VQ++E
Sbjct: 76 EDKVQSDE 83

[Close]
BLAST of CSPI05G11680 vs. NCBI nr
Match: KAG7031504.1 (hypothetical protein SDJN02_05544, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-23
Identity = 54/68 (79.41%), Postives = 58/68 (85.29%), Query Frame = 0 

Query: 1  MKTGEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKG 60
          M TGEKGLLKF  P+LRN LHPINIEAA LWSVAG ATALWLVQPFDWLKKK+W VEEK 
Sbjct: 16 MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKA 75

Query: 61 ESGVQTNE 69
          E  VQ++E
Sbjct: 76 EDKVQSDE 83

[Close]
BLAST of CSPI05G11680 vs. NCBI nr
Match: KAG6600869.1 (hypothetical protein SDJN03_06102, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-23
Identity = 54/68 (79.41%), Postives = 58/68 (85.29%), Query Frame = 0 

Query: 1  MKTGEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKKKVWAVEEKG 60
          M TGEKGLLKF  P+LRN LHPINIEAA LWSVAG ATALWLVQPFDWLKKK+W VEEK 
Sbjct: 1  MMTGEKGLLKFFSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWEVEEKA 60

Query: 61 ESGVQTNE 69
          E  VQ++E
Sbjct: 61 EDKVQSDE 68

[Close]
BLAST of CSPI05G11680 vs. NCBI nr
Match: KAA0067023.1 (hypothetical protein E6C27_scaffold38G00590 [Cucumis melo var. makuwa] >TYK26259.1 hypothetical protein E5676_scaffold14G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 9.1e-19
Identity = 57/105 (54.29%), Postives = 60/105 (57.14%), Query Frame = 0 

Query: 1   MKTGEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLV----------------- 60
           MKTGEKGLLKFLHP+LRN+LHPINIEA ALWSVAG ATA  L                  
Sbjct: 1   MKTGEKGLLKFLHPKLRNLLHPINIEAVALWSVAGTATAFGLYRYSSLASPTLFFSSTSM 60

Query: 61  --------------------QPFDWLKKKVWAVEEKGESGVQTNE 69
                               QPFDWLKKKVW VEEK E+ VQTNE
Sbjct: 61  FLFVVKNRNYSYRLETEKTWQPFDWLKKKVWKVEEKEENEVQTNE 105

[Close]
BLAST of CSPI05G11680 vs. TAIR 10
Match: AT2G40765.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 32 Blast hits to 32 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 0 

Query: 4  GEKGLLKFLHPRLRNVLHPINIEAAALWSVAGIATALWLVQPFDWLKK 52
          G  GLL  + P+++     I+I+AAA W +A  A A+W+VQPF W+KK
Sbjct: 3  GTSGLLNAVKPKIQT----IDIQAAAGWGIAAAAGAIWVVQPFGWIKK 46

The following BLAST results are available for this feature:
BLAST of CSPI05G11680 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P485051.6e-0551.11Ubiquinol-cytochrome c reductase complex 6.7 kDa protein OS=Solanum tuberosum OX... [more]
Q94K781.6e-0545.83Cytochrome b-c1 complex subunit 10, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
BLAST of CSPI05G11680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSL82.2e-3198.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G223090 PE=4 SV=1[more]
A0A6J1JMA07.7e-2480.88ubiquinol-cytochrome c reductase complex 6.7 kDa protein OS=Cucurbita maxima OX=... [more]
A0A5A7VG064.4e-1954.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D2MEA81.6e-0864.58Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A13G009000v1 P... [more]
A0A7J9FBL11.6e-0856.90Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_000248 PE=4 SV=1[more]
BLAST of CSPI05G11680 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50751.14.6e-3198.53hypothetical protein Csa_005826 [Cucumis sativus][more]
XP_022988689.11.6e-2380.88ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Cucurbita maxima][more]
KAG7031504.13.6e-2379.41hypothetical protein SDJN02_05544, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6600869.13.6e-2379.41hypothetical protein SDJN03_06102, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0067023.19.1e-1954.29hypothetical protein E6C27_scaffold38G00590 [Cucumis melo var. makuwa] >TYK26259... [more]
BLAST of CSPI05G11680 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G40765.11.1e-0645.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G11680.1CSPI05G11680.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane