CSPI05G11580 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G11580
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pectin lyase-like superfamily protein
Location	Chr5: 10199595 .. 10200599 (-)
RNA-Seq Expression	CSPI05G11580
Synteny	CSPI05G11580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTTCACACTTCTGTATTCTATTGCTACAATTTCACTGCTACTAACATGAAAATTATAGCTCCACATAATAGTCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTGCCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATTGGCCATAGTACTGAAAATATCACCGTCACCAATGTCACTTGCGGCCCTGGACATGGCCTTAGGTAAATAGTGCATTTTTTAAAAAAGAAATTAAAGATTAAATAGACACAAAGGAAAACATCTAAAAGCTTTCCATTATTCATTTTTTTTTCAGTGTGGGCAGCTTGGGCAAGTACTCGAAAGAAAAGGGTGTCTATGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCCACCAATGGTGCCAGAATCAAGACTTGGGCTAGCCCTATCTCGGGGTTAGCCTCGAGAATTATCTTTGAAGACATTGTAATGTACAACGTAAAAAATCCTATAATTATCGATCAAACCTACAGCACTAAAAAGAAGAAGGTAAATAATAACAATAAAAACTAACCATGTTAATTAGTTTAACTCAGTCGAGATGTCAAGACCACAAAATGAGAGGGTTAAGAAAATGTTAATCTAAAATTGAGATGTTCAGATGCACTCTCTAATGTTTCTTCTTCTTGTATATCTTATTAAAAGAAAATGATGATCTTAATCTTTAGAGTTTAATAGTGATTTAACGACAACATGTTACTAAACTTACATGTGCATGCAGGAATCAAATTGGAAGGTTAGCAACGTACAGTTCAAGAACATTCGGGGAACATCGACAACGAATGTGGCAGTGTTGTTGGAGTGCAGCAAGTTGTTTCCATGCGAGGGGGTGGAGTTGAGGGACATTAACTTGAGTTATGGAGGCACCAACTTGAGAAATACGACCATTGTTTCTTCATGTTCAAATGCAAAGATTGCTACTTTTGGGGTTCAAAAGCCACCACCTTGTGTTGTA

mRNA sequence

ATGGGGTTTCACACTTCTGTATTCTATTGCTACAATTTCACTGCTACTAACATGAAAATTATAGCTCCACATAATAGTCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTGCCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATTGGCCATAGTACTGAAAATATCACCGTCACCAATGTCACTTGCGGCCCTGGACATGGCCTTAGTGTGGGCAGCTTGGGCAAGTACTCGAAAGAAAAGGGTGTCTATGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCCACCAATGGTGCCAGAATCAAGACTTGGGCTAGCCCTATCTCGGGGTTAGCCTCGAGAATTATCTTTGAAGACATTGTAATGTACAACGTAAAAAATCCTATAATTATCGATCAAACCTACAGCACTAAAAAGAAGAAGGAATCAAATTGGAAGGTTAGCAACGTACAGTTCAAGAACATTCGGGGAACATCGACAACGAATGTGGCAGTGTTGTTGGAGTGCAGCAAGTTGTTTCCATGCGAGGGGGTGGAGTTGAGGGACATTAACTTGAGTTATGGAGGCACCAACTTGAGAAATACGACCATTGTTTCTTCATGTTCAAATGCAAAGATTGCTACTTTTGGGGTTCAAAAGCCACCACCTTGTGTTGTA

Coding sequence (CDS)

ATGGGGTTTCACACTTCTGTATTCTATTGCTACAATTTCACTGCTACTAACATGAAAATTATAGCTCCACATAATAGTCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTGCCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATTGGCCATAGTACTGAAAATATCACCGTCACCAATGTCACTTGCGGCCCTGGACATGGCCTTAGTGTGGGCAGCTTGGGCAAGTACTCGAAAGAAAAGGGTGTCTATGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCCACCAATGGTGCCAGAATCAAGACTTGGGCTAGCCCTATCTCGGGGTTAGCCTCGAGAATTATCTTTGAAGACATTGTAATGTACAACGTAAAAAATCCTATAATTATCGATCAAACCTACAGCACTAAAAAGAAGAAGGAATCAAATTGGAAGGTTAGCAACGTACAGTTCAAGAACATTCGGGGAACATCGACAACGAATGTGGCAGTGTTGTTGGAGTGCAGCAAGTTGTTTCCATGCGAGGGGGTGGAGTTGAGGGACATTAACTTGAGTTATGGAGGCACCAACTTGAGAAATACGACCATTGTTTCTTCATGTTCAAATGCAAAGATTGCTACTTTTGGGGTTCAAAAGCCACCACCTTGTGTTGTA

Protein sequence

MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV

Homology

[Close]

BLAST of CSPI05G11580 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-55
Identity = 112/227 (49.34%), Postives = 139/227 (61.23%), Query Frame = 0


Query: 3   FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
           FH +VF C N T   +KI AP  SPNTDG+H+  S+ V I  S I TGDDC+SIG  T+N
Sbjct: 173 FHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKN 232

Query: 63  ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASR 122
           + +  +TCGPGHG+S+GSLGK+  E+ V  + + NCTI N +NGARIKTW     G  S 
Sbjct: 233 MVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSE 292

Query: 123 IIFEDIVMYNVKNPIIIDQTY----STKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECS 182
           I FEDI M NV +PI+IDQ Y      KK +ES  K+SN+ FKNIRGTS    A+   CS
Sbjct: 293 IHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICS 352

Query: 183 KLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPC 226
              PC+ VEL DI++ + G         S C N K  T G   P PC
Sbjct: 353 GSSPCQNVELADIDIQHNGAE----PATSQCLNVKPITIGKLNPIPC 395

[Close]

BLAST of CSPI05G11580 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.9e-55
Identity = 112/227 (49.34%), Postives = 139/227 (61.23%), Query Frame = 0


Query: 3   FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
           FH +VF C N T   +KI AP  SPNTDG+H+  S+ V I  S I TGDDC+SIG  T+N
Sbjct: 173 FHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKN 232

Query: 63  ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASR 122
           + +  +TCGPGHG+S+GSLGK+  E+ V  + + NCTI N +NGARIKTW     G  S 
Sbjct: 233 MVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSE 292

Query: 123 IIFEDIVMYNVKNPIIIDQTY----STKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECS 182
           I FEDI M NV +PI+IDQ Y      KK +ES  K+SN+ FKNIRGTS    A+   CS
Sbjct: 293 IHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICS 352

Query: 183 KLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPC 226
              PC+ VEL DI++ + G         S C N K  T G   P PC
Sbjct: 353 GSSPCQNVELADIDIKHNGAE----PATSQCLNVKPITSGKLNPIPC 395

[Close]

BLAST of CSPI05G11580 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 7.8e-54
Identity = 110/227 (48.46%), Postives = 139/227 (61.23%), Query Frame = 0


Query: 3   FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
           FH +V  C N T     + AP NSPNTDG+H+S S  V I +S   TGDDC+S+G  TE 
Sbjct: 165 FHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQ 224

Query: 63  ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASR 122
           + +T VTCGPGHG+SVGSLG    EK V  V V+NCT  N  NG RIKTW +   G+ + 
Sbjct: 225 LYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVND 284

Query: 123 IIFEDIVMYNVKNPIIIDQTY----STKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECS 182
           + FEDI++ NV NP++IDQ Y       K   S  K+S V F+NI+GTS T  AV L  S
Sbjct: 285 VHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLRS 344

Query: 183 KLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPC 226
           K  PCEG+E+ DI+++Y G   +     SSC N K +  G Q PP C
Sbjct: 345 KGVPCEGIEVGDIDITYSG---KEGPAKSSCENIKPSLKGKQNPPVC 388

[Close]

BLAST of CSPI05G11580 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-53
Identity = 112/227 (49.34%), Postives = 139/227 (61.23%), Query Frame = 0


Query: 3   FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
           FH +V  C N T    KI A   S NTDG+H+  S  V I N+ I TGDDC+S+G  ++N
Sbjct: 131 FHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLGDGSKN 190

Query: 63  ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASR 122
           I +TN+TCGPGHG+SVGSLG+Y  E+ V  + VKNCTI  + NG RIKTW     G AS 
Sbjct: 191 INITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSEPGEASE 250

Query: 123 IIFEDIVMYNVKNPIIIDQTY----STKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECS 182
           + F+DI M +V  PI+IDQ Y        +  S+ K+S + FKNI+GTSTT  AV L CS
Sbjct: 251 MHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTSTTKEAVKLVCS 310

Query: 183 KLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPC 226
           K FPC GVEL DI+L+Y G   +     S C N K    G Q P  C
Sbjct: 311 KSFPCNGVELADIDLTYSG---KGGPATSVCENIKPTIKGKQIPAIC 354

[Close]

BLAST of CSPI05G11580 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-52
Identity = 104/224 (46.43%), Postives = 142/224 (63.39%), Query Frame = 0


Query: 3   FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
           FH +V  C + T  ++ + AP  S NTDG+H+  SK VTI N+ I TGDDC+SIG  ++N
Sbjct: 152 FHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISIGPGSQN 211

Query: 63  ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASR 122
           +T+T V CGPGHG+S+GSLG+Y+ EK V  + VK CT     NG R+KTW +   G A+ 
Sbjct: 212 VTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPNSPPGAATD 271

Query: 123 IIFEDIVMYNVKNPIIIDQTY----STKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECS 182
           + F+D+ M NV+NP+I+DQ Y       ++  S  K+SN+ F NIRGTST  VAV++ CS
Sbjct: 272 LTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKLSNINFNNIRGTSTGKVAVVIACS 331

Query: 183 KLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKP 223
              PC  +++ +INLSY G     T   S+CSN K    G Q P
Sbjct: 332 HGMPCSNMKIGEINLSYRGAGGPAT---STCSNVKPTFSGKQVP 372

[Close]

BLAST of CSPI05G11580 vs. ExPASy TrEMBL
Match: A0A0A0KMA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122
Identity = 221/227 (97.36%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 1   MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST 60
           MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANS+IGTGDDCVSIGHST
Sbjct: 199 MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSIIGTGDDCVSIGHST 258

Query: 61  ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLA 120
           ENITVTNVTCGPGHGL   SLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASP+SGLA
Sbjct: 259 ENITVTNVTCGPGHGL---SLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVSGLA 318

Query: 121 SRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 180
           SRIIFEDIVMYNVKNPIIIDQTY TKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL
Sbjct: 319 SRIIFEDIVMYNVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 378

Query: 181 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 228
           FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV
Sbjct: 379 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 422

[Close]

BLAST of CSPI05G11580 vs. ExPASy TrEMBL
Match: A0A5A7U4W1 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00950 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 8.0e-118
Identity = 212/227 (93.39%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST 60
           MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIGHST
Sbjct: 231 MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHST 290

Query: 61  ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLA 120
           ENI VTNVTCGPGHGLSVGSLGKYSKEK VY+VLVKNCTIFNATNGARIKTWAS ISGLA
Sbjct: 291 ENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRISGLA 350

Query: 121 SRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 180
           S IIFEDIVMYNVKNPIIIDQTY TKKKK SNWK+S+V FKNIRGTSTTNVAVLLECS+L
Sbjct: 351 SGIIFEDIVMYNVKNPIIIDQTYGTKKKKVSNWKISDVHFKNIRGTSTTNVAVLLECSEL 410

Query: 181 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 228
            PCEGVELRDINL+YGGTNLRNTTIVSSCSNAKIATFGVQ PPPCVV
Sbjct: 411 LPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 457

[Close]

BLAST of CSPI05G11580 vs. ExPASy TrEMBL
Match: A0A5A7TQ89 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36913G00010 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 8.0e-118
Identity = 212/227 (93.39%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST 60
           MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIGHST
Sbjct: 231 MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHST 290

Query: 61  ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLA 120
           ENI VTNVTCGPGHGLSVGSLGKYSKEK VY+VLVKNCTIFNATNGARIKTWAS ISGLA
Sbjct: 291 ENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRISGLA 350

Query: 121 SRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 180
           S IIFEDIVMYNVKNPIIIDQTY TKKKK SNWK+S+V FKNIRGTSTTNVAVLLECS+L
Sbjct: 351 SGIIFEDIVMYNVKNPIIIDQTYGTKKKKVSNWKISDVHFKNIRGTSTTNVAVLLECSEL 410

Query: 181 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 228
            PCEGVELRDINL+YGGTNLRNTTIVSSCSNAKIATFGVQ PPPCVV
Sbjct: 411 LPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 457

[Close]

BLAST of CSPI05G11580 vs. ExPASy TrEMBL
Match: A0A5A7U0D6 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold670G00070 PE=3 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.3e-117
Identity = 211/227 (92.95%), Postives = 216/227 (95.15%), Query Frame = 0


Query: 1   MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST 60
           MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIGHST
Sbjct: 124 MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHST 183

Query: 61  ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLA 120
           ENI VTNVTCGPGHGLSVGSLGKYSKEK VY+VLVKNCTIFNATNGARIKTWAS ISGLA
Sbjct: 184 ENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRISGLA 243

Query: 121 SRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 180
           S IIFEDIVMYNVKNPIIIDQTY TKKKK SNWK+S+V FKNIRGTSTTNVAVLLECS+L
Sbjct: 244 SGIIFEDIVMYNVKNPIIIDQTYGTKKKKVSNWKISDVHFKNIRGTSTTNVAVLLECSEL 303

Query: 181 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 228
            PCEGVELRDINL+YGGTNLRNTTIVSSCSNAKI TFGVQ PPPCVV
Sbjct: 304 LPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIVTFGVQNPPPCVV 350

[Close]

BLAST of CSPI05G11580 vs. ExPASy TrEMBL
Match: A0A5D3C9J8 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00530 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.1e-106
Identity = 192/226 (84.96%), Postives = 206/226 (91.15%), Query Frame = 0


Query: 2   GFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTE 61
           GFH S+F CYNFTATN+ IIAPH+SPNTDG+HLSTSKLV IANS+IGTGDDCVSIGHSTE
Sbjct: 231 GFHMSLFSCYNFTATNINIIAPHDSPNTDGIHLSTSKLVNIANSIIGTGDDCVSIGHSTE 290

Query: 62  NITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLAS 121
            ITVTNVTCGPGHGLSVGSLGKY +EK VYDVLVKNCTIFNATNGARIKT+ASPISG AS
Sbjct: 291 KITVTNVTCGPGHGLSVGSLGKYPEEKDVYDVLVKNCTIFNATNGARIKTFASPISGSAS 350

Query: 122 RIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKLF 181
            IIFEDIVMYNVK PIIIDQTY T + KES WKVS+V FKNIRGTS TNVAVLL+CSKL 
Sbjct: 351 GIIFEDIVMYNVKYPIIIDQTYDTNENKESKWKVSDVHFKNIRGTSATNVAVLLDCSKLL 410

Query: 182 PCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 228
           PCEGVELRDI+L+YGGT+L+NTTIVSSCSNAKI TFGVQ PPPC V
Sbjct: 411 PCEGVELRDIDLTYGGTDLKNTTIVSSCSNAKITTFGVQNPPPCDV 456

[Close]

BLAST of CSPI05G11580 vs. NCBI nr
Match: XP_031745094.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 3.7e-125
Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST 60
           MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST
Sbjct: 227 MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST 286

Query: 61  ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLA 120
           ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASP+SGLA
Sbjct: 287 ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVSGLA 346

Query: 121 SRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 180
           SRIIFEDIVMYNVKNPIIIDQTY TKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL
Sbjct: 347 SRIIFEDIVMYNVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 406

Query: 181 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 228
           FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQ PPPCVV
Sbjct: 407 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 453

[Close]

BLAST of CSPI05G11580 vs. NCBI nr
Match: XP_031745093.1 (polygalacturonase-like [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 1.1e-124
Identity = 223/227 (98.24%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST 60
           MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST
Sbjct: 1   MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST 60

Query: 61  ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLA 120
           ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASP+SGLA
Sbjct: 61  ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVSGLA 120

Query: 121 SRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 180
           SRIIFEDIVMYNVKNPIIIDQTY TKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL
Sbjct: 121 SRIIFEDIVMYNVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 180

Query: 181 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 228
           FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGV+ PPPCVV
Sbjct: 181 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVKNPPPCVV 227

[Close]

BLAST of CSPI05G11580 vs. NCBI nr
Match: XP_031741281.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 456.4 bits (1173), Expect = 1.4e-124
Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST 60
           MGFHTSVFYCYNFTATNMKIIAPHNSPNTDG HLSTSKLVTIANSVIGTGDDCVSIGHST
Sbjct: 227 MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGTHLSTSKLVTIANSVIGTGDDCVSIGHST 286

Query: 61  ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLA 120
           ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWAS ISGLA
Sbjct: 287 ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASRISGLA 346

Query: 121 SRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 180
           SRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL
Sbjct: 347 SRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 406

Query: 181 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 228
           FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV
Sbjct: 407 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 453

[Close]

BLAST of CSPI05G11580 vs. NCBI nr
Match: XP_031745103.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 2.2e-122
Identity = 218/227 (96.04%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 1   MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST 60
           MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANS+IGTGDDCVSIGHST
Sbjct: 275 MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSIIGTGDDCVSIGHST 334

Query: 61  ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLA 120
           ENIT+TNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLA
Sbjct: 335 ENITITNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLA 394

Query: 121 SRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 180
           SRIIFEDIVMY VKNPIIIDQTY TKK +ESNWKVSNVQFKNIRGTSTTNVAVLLECSKL
Sbjct: 395 SRIIFEDIVMYGVKNPIIIDQTYGTKKSEESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 454

Query: 181 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 228
           FPCEGVELRDINLSYGG+NLRN+TIVSSCSNAKIATFGVQ PPPCVV
Sbjct: 455 FPCEGVELRDINLSYGGSNLRNSTIVSSCSNAKIATFGVQNPPPCVV 501

[Close]

BLAST of CSPI05G11580 vs. NCBI nr
Match: KAA0048661.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0048665.1 exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK18163.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117
Identity = 212/227 (93.39%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHST 60
           MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIGHST
Sbjct: 231 MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHST 290

Query: 61  ENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLA 120
           ENI VTNVTCGPGHGLSVGSLGKYSKEK VY+VLVKNCTIFNATNGARIKTWAS ISGLA
Sbjct: 291 ENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRISGLA 350

Query: 121 SRIIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKL 180
           S IIFEDIVMYNVKNPIIIDQTY TKKKK SNWK+S+V FKNIRGTSTTNVAVLLECS+L
Sbjct: 351 SGIIFEDIVMYNVKNPIIIDQTYGTKKKKVSNWKISDVHFKNIRGTSTTNVAVLLECSEL 410

Query: 181 FPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 228
            PCEGVELRDINL+YGGTNLRNTTIVSSCSNAKIATFGVQ PPPCVV
Sbjct: 411 LPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 457

[Close]

BLAST of CSPI05G11580 vs. TAIR 10
Match: AT4G18180.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 3.6e-54
Identity = 114/236 (48.31%), Postives = 148/236 (62.71%), Query Frame = 0


Query: 3   FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
           FH ++  C +F  T + I AP +SPNTDG+H+  S  V  + S I TGDDCVSIG     
Sbjct: 178 FHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDCVSIGQGNSQ 237

Query: 63  ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWA-SPISGLAS 122
           IT+T++ CGPGHG+SVGSLG+Y  EK V  ++VK+C I   TNG RIKTWA SP    A+
Sbjct: 238 ITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKISGTTNGIRIKTWANSPGLSAAT 297

Query: 123 RIIFEDIVMYNVKNPIIIDQTY----STKKKKESNWKVSNVQFKNIRGTSTTNVAVLLEC 182
            + FE+I+M NV NPIIIDQ+Y    S      S  ++S + FKNIRGTS++ VAV L C
Sbjct: 298 NMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVELSEIYFKNIRGTSSSLVAVQLHC 357

Query: 183 SKLFPCEGVELRDINL----SYGG----TNLRNTTIVSSCSNAKIATFGVQKPPPC 226
           S+  PC+ V L +++L    S GG    +N  N  + SSC N +    G Q PPPC
Sbjct: 358 SRGMPCKKVYLENVHLDLSSSDGGRKQSSNRGNEAVSSSCRNVRANYIGTQIPPPC 413

[Close]

BLAST of CSPI05G11580 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 208.0 bits (528), Expect = 8.0e-54
Identity = 113/228 (49.56%), Postives = 140/228 (61.40%), Query Frame = 0


Query: 3   FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
           FH +V    N T  N+KI+AP +SPNTDG+HL  S  V I NS I TGDDC+S+G   +N
Sbjct: 162 FHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKN 221

Query: 63  ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWAS-PISGLAS 122
           + V  VTCGPGHG+SVGSLG+Y  E+ V  + V NCT+    NG RIKTW S   S  AS
Sbjct: 222 LHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACSTTAS 281

Query: 123 RIIFEDIVMYNVKNPIIIDQTY----STKKKKESNWKVSNVQFKNIRGTSTTNVAVLLEC 182
            I FEDI++ +V NPI+IDQ Y       K+K S  K+ N+ FKNIRGTS    AV L C
Sbjct: 282 DIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAVKLLC 341

Query: 183 SKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPC 226
           SK +PC+ VE+ DI++ Y G +   T     CSN      G Q P  C
Sbjct: 342 SKGYPCQNVEIGDIDIKYNGADGPAT---FHCSNVSPKILGSQSPKAC 386

[Close]

BLAST of CSPI05G11580 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 205.7 bits (522), Expect = 4.0e-53
Identity = 113/228 (49.56%), Postives = 142/228 (62.28%), Query Frame = 0


Query: 3   FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
           FH +V    N T  N+KI+AP  SPNTDG+HL  S  V+I NS I TGDDCVS+G    N
Sbjct: 163 FHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDGMVN 222

Query: 63  ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWAS-PISGLAS 122
           + V NV CGPGHG+SVGSLG+Y  E+ V  + V NCT+    NG RIKTW S   S  AS
Sbjct: 223 LLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTAS 282

Query: 123 RIIFEDIVMYNVKNPIIIDQTY----STKKKKESNWKVSNVQFKNIRGTSTTNVAVLLEC 182
            I FE+I++ NV NPI+IDQ Y       K+K S+ K++N+ F+ IRGTS    AV L C
Sbjct: 283 NIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAVKLLC 342

Query: 183 SKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPC 226
           SK +PCE V++ DIN+ Y G +   T +   CSN +    G Q P  C
Sbjct: 343 SKGYPCENVQVGDINIQYTGADGPATFM---CSNVRPKLVGTQFPKAC 387

[Close]

BLAST of CSPI05G11580 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 203.0 bits (515), Expect = 2.6e-52
Identity = 112/228 (49.12%), Postives = 139/228 (60.96%), Query Frame = 0


Query: 3   FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
           FH +V    N T  N+K+IAP  SPNTDG+HL  S+ V I NS I TGDDC+S+G   +N
Sbjct: 163 FHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKN 222

Query: 63  ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWAS-PISGLAS 122
           + V NV CGPGHG+SVGSLG+Y  E+ V  + V NCT+    NG RIKTW S   +  AS
Sbjct: 223 LHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTAS 282

Query: 123 RIIFEDIVMYNVKNPIIIDQTY----STKKKKESNWKVSNVQFKNIRGTSTTNVAVLLEC 182
            I FE+I++ NV NPI+IDQ Y       K+K S  K+ ++ FKNIRGTS    AV L C
Sbjct: 283 GIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAVKLLC 342

Query: 183 SKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPC 226
           SK  PC  VE+ +INL Y G +   T +   CSN      G Q P  C
Sbjct: 343 SKAHPCANVEIGNINLEYKGADGPPTFM---CSNVSPKLVGTQNPKAC 387

[Close]

BLAST of CSPI05G11580 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 202.6 bits (514), Expect = 3.4e-52
Identity = 111/227 (48.90%), Postives = 136/227 (59.91%), Query Frame = 0


Query: 3   FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
           FH ++  C N T T++ I AP  S NTDG+H+  S  V +  + I TGDDCVSIG  TEN
Sbjct: 214 FHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTEN 273

Query: 63  ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASR 122
           + V NV CGPGHG+S+GSLG+Y  E+ V  V V+ C I N  NG RIKTW     G+AS 
Sbjct: 274 LIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASN 333

Query: 123 IIFEDIVMYNVKNPIIIDQTY----STKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECS 182
           I+FEDI M NV  P++IDQ Y      K    S  K+S+V  KNI+GTS T VAV L CS
Sbjct: 334 ILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCS 393

Query: 183 KLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPC 226
           K  PC  + L DINL + G   +    VS+CSN K    G   P  C
Sbjct: 394 KGVPCTNIALSDINLVHNG---KEGPAVSACSNIKPILSGKLVPAAC 437

The following BLAST results are available for this feature:

BLAST of CSPI05G11580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39766	1.1e-55	49.34	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	1.9e-55	49.34	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q05967	7.8e-54	48.46	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
P24548	1.7e-53	49.34	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q6H9K0	1.1e-52	46.43	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]

BLAST of CSPI05G11580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMA6	1.1e-122	97.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1	[more]
A0A5A7U4W1	8.0e-118	93.39	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TQ89	8.0e-118	93.39	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5A7U0D6	2.3e-117	92.95	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3C9J8	9.1e-106	84.96	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of CSPI05G11580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745094.1	3.7e-125	98.68	exopolygalacturonase-like [Cucumis sativus]	[more]
XP_031745093.1	1.1e-124	98.24	polygalacturonase-like [Cucumis sativus]	[more]
XP_031741281.1	1.4e-124	99.12	exopolygalacturonase [Cucumis sativus]	[more]
XP_031745103.1	2.2e-122	96.04	exopolygalacturonase-like [Cucumis sativus]	[more]
KAA0048661.1	1.6e-117	93.39	exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0048665.1 exopolygalact...	[more]

BLAST of CSPI05G11580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18180.1	3.6e-54	48.31	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	8.0e-54	49.56	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	4.0e-53	49.56	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	2.6e-52	49.12	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	3.4e-52	48.90	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 155..177 e-value: 8900.0 score: 0.4 coord: 10..36 e-value: 8500.0 score: 0.6 coord: 90..111 e-value: 10.0 score: 15.1 coord: 120..141 e-value: 2500.0 score: 4.4 coord: 60..80 e-value: 4000.0 score: 2.9 coord: 37..58 e-value: 1100.0 score: 6.8
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 3..205 e-value: 1.1E-65 score: 221.8
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 67..80
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..224 e-value: 6.4E-71 score: 241.5
None	No IPR available	PANTHER	PTHR31375:SF158	POLYGALACTURONASE	coord: 1..222
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 1..222
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 2..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G11580.1	CSPI05G11580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity