CSPI05G11270 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G11270
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr5: 9859031 .. 9861834 (-)
RNA-Seq Expression	CSPI05G11270
Synteny	CSPI05G11270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAATCGCTTCCATCGCCAGCTCGCTTTCAGCAATTCGCTAAGCTCGTCTTCTCCTCCAAAAACCCCCAATCACAACCCAAGAAGTCTCGGATCCGAGCTTCTCCTTCCGAAACTCCGATTTCCGGTTCCGTTCGAGTAACCTCCGAGCCGAATAAGAACAAGTACATGGAGGAGGAGGAGAAGAACCGGACTCCTTTGGCTGATGTGGTTTCGGATTGTGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAAAGCCGGGGATACGTCGATGCAAGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGAACACAAAGAAGGTTTGCGTTTTTTTTTTTTTTTTTTATCTCTACATTTCGAGATTTCGTGTTCATTTTCTTGCTGAAGTATCTGGGGAATTTGAGAGGAAATACAAAATTAATTTCGATTGGTTCTTGAAGGGTTGTGAAGTACTTCTAGGTTTTAGAGAATGTAGGTAATTTTGGGATGAGGTTCATTGGAGAATTTCATCCTGTTGGTTTGTCTTTTGAGCTTTTTCTAATTGCTAAGGTTATTATGGTTTGTTTTGTGTTGCTTAACGATGAATAAGGTTTTCTTTTGGCTTTCCTATTGAGATAGGGAAAGGCTCATTGGTTTGGTTTTGAATATTGCGCTCGAGAGAAATAAGAGTTGAGAGTCCTTAGTTGGGTGAAATTTGGTTCGCTTTGAACGTCTGTTGTGTTTGTGCCTTGAAGCACATGTTTGGGATTGGTTTTGAAATGTTTACTGTTCAAATCACTCTTAAACATGTTTAAATTGATTAAAGGCATGCTTTAAGGGATCGGAAGGATTTTGAACCTGACATATCGATTTTGACCATTTCTGAATCACTCCAAAATATGCCCATAAAAGTCCTTTTAACAATGTTTTCTTCTTAGCTAGAGTTCTTTTGTGGCATGGTTCTCTTTCCCTTTTCCACACCACTTCATGGAGTTAGTAGAATCACTTTTCAATAGGTAAACATAAACTTTTCTTGAGAGAAAAACGTGAGAGTAGTAGTACGGGATATGTTGGGAATATTAGTGGGATAGTGATAAGGGCATAGTGATAATTAGTTAGTGATGTCTTGGTAATAAGGGAGTTGAGCCCCTTAGAAGGGAGAAAAATTCCGGGTATTGTCCAGTACGCGACTTTGGGAGACACGTAATCCTCTCGAAAAGCTACTGATATTTTGGTTTCTTTTGGCATTGCAATATAGTTCTATCTTTTGTGTTTTCTGTTGTGTTCCTTATTATGACAATCCTAACAAAAACAAACCCTGTCCTCATCATTAAGTAAATGTCTGATCTCTGAACTAAGGGACTTGCTTGGATCTATCGAGCTTCAAAATATCAGGCATCGGTTTGGAAAGCAAGCGATAGACATCCAGGTATTCAAATTCTACAAAGTTTGATTGGCAATAATCTTTCTACATTGCATTTTTACTTCTTTTGTTCTTTAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGGGTGAAACGAGATAACGTCAGATGACCCTTTCACTAATCATAGTAAGTTGTGTTTTAAATTCAAACCTTTCTATTATAAGAATTGAACTCTTCATATGGTTTTAATTCACGTATGTGAAATTCATCATAAACTTGGTTATGAAAAAGAAAAAAGGGAAACGAGTTATCATCTATCATGTTAATTTGTGTAGAAGTAAAAGTTCTTTTGTTTCTCAACTCCTCAGACAGAAAGCTTTTTCATTTATACATAAATATTTCATTGTGGATTGCTTTTATTTAAGTTCTGTTGTCCATTATTACCTATGTAATCATAATGACGATTTCAGAAGGAATATAACATTTTTGGTTTATATCCATACTTGCCCTCAAAATTTCAAATTTGTTTCACTTTGGTTCCTAATACTTCTTTAAATCAATGAAATATTCAAAGATACCAAAGGTCCAAAAGGGCCATTTCATAGGGTATACAAAAGATGTTTCCAATTTGCAATAGGAAAAGAAACGGTCATAGCCAAATTTATCTTAGCACAGAAACAACTTTTTTATCACTTGCAGATAATCATTTTAGTCGCTGAAATTTTGTCTGTCTGGTTTCTAAGATAGACGAATAATTTTGAATATGTGTATTAACGTGTGTTGCAGTAGCACCTATTAGTCAGGGAAGTAGATTGGAGAAAGTATTTGGTGGAGCTGTGATATTAGTAACTAGGAACAGAATAACTCAAGGGATTCAAGGGCAACAAATGTTGTCATGCCCTGAGTCATTATATGGTGCCCGTGCCTGCTGCAGGCTTGTTTCTATAGGAAAACTATGAACAAGATATCTTAAGGAGATTGATCAGAGGGTAGTTTTTTTAATCTGACAATATGTGGAGGGAGAAAATCAAACCTTTGACTTCAAGTTGCTAGTATAAGATTTGTGTTAATTGAGTTATGCTCATACCGGCATTAATCATAGGATAGGTAAGTGTATATATTGGTGCTTCAATATTTTGTGAAGTATAAGTGTAATTTTTTGAGAGAGAAGATTTATCCATCTTTTCATCAAGTTATGGACGTAGTTCATTCCCTAATTTGTGTTACTCATTTTTGCAGCTAATAATCCTTGCACTGCCAAAGTTCACAGTCAAATGGGTTTGTGTTTTCTATCGTAAGCTTTTGGTCACCCAATGTAATGTATCCTCACCATGTTAATCATATACTGTATTTGGTTGATTAAATTTAGAATGGTGAATGCATTTCCTTCCCAACCGATGGCTTTACTT

mRNA sequence

ATGGCAAAATCGCTTCCATCGCCAGCTCGCTTTCAGCAATTCGCTAAGCTCGTCTTCTCCTCCAAAAACCCCCAATCACAACCCAAGAAGTCTCGGATCCGAGCTTCTCCTTCCGAAACTCCGATTTCCGGTTCCGTTCGAGTAACCTCCGAGCCGAATAAGAACAAGTACATGGAGGAGGAGGAGAAGAACCGGACTCCTTTGGCTGATGTGGTTTCGGATTGTGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAAAGCCGGGGATACGTCGATGCAAGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGAACACAAAGAAGGGACTTGCTTGGATCTATCGAGCTTCAAAATATCAGGCATCGGTTTGGAAAGCAAGCGATAGACATCCAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGGGTGAAACGAGATAACGTCAGATGACCCTTTCACTAATCATACTAATAATCCTTGCACTGCCAAAGTTCACAGTCAAATGGGTTTGTGTTTTCTATCGTAAGCTTTTGGTCACCCAATGTAATGTATCCTCACCATGTTAATCATATACTGTATTTGGTTGATTAAATTTAGAATGGTGAATGCATTTCCTTCCCAACCGATGGCTTTACTT

Coding sequence (CDS)

ATGGCAAAATCGCTTCCATCGCCAGCTCGCTTTCAGCAATTCGCTAAGCTCGTCTTCTCCTCCAAAAACCCCCAATCACAACCCAAGAAGTCTCGGATCCGAGCTTCTCCTTCCGAAACTCCGATTTCCGGTTCCGTTCGAGTAACCTCCGAGCCGAATAAGAACAAGTACATGGAGGAGGAGGAGAAGAACCGGACTCCTTTGGCTGATGTGGTTTCGGATTGTGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAAAGCCGGGGATACGTCGATGCAAGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGAACACAAAGAAGGGACTTGCTTGGATCTATCGAGCTTCAAAATATCAGGCATCGGTTTGGAAAGCAAGCGATAGACATCCAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGGGTGAAACGAGATAACGTCAGATGA

Protein sequence

MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVTSEPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIYRASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR*

Homology

[Close]

BLAST of CSPI05G11270 vs. ExPASy TrEMBL
Match: A0A0A0KM25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218760 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.4e-81
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVTSEPNKNKYMEE 60
           MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRV SEPNKNKYMEE
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 158
           RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR
Sbjct: 121 RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 157

[Close]

BLAST of CSPI05G11270 vs. ExPASy TrEMBL
Match: A0A1S3C493 (uncharacterized protein LOC103496713 OS=Cucumis melo OX=3656 GN=LOC103496713 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.6e-75
Identity = 145/157 (92.36%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVTSEPNKNKYMEE 60
           MAKSLPSP RFQQFAKLVFSSKNPQS PKKSRIRASPSETPISGSVRV  EPNKNKYMEE
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPPKKSRIRASPSETPISGSVRVILEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           +EKNRTPL+DVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  KEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 158
           RASKYQ SVWKAS+RHPGYLATDSESS+RRVKR++ R
Sbjct: 121 RASKYQPSVWKASERHPGYLATDSESSNRRVKRNDFR 157

[Close]

BLAST of CSPI05G11270 vs. ExPASy TrEMBL
Match: A0A6J1FNN7 (uncharacterized protein LOC111447103 OS=Cucurbita moschata OX=3662 GN=LOC111447103 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.5e-57
Identity = 122/159 (76.73%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVTSEPNKNKYM 60
           MAKS P  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRV SEP + K  
Sbjct: 1   MAKSFPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPK-K 60

Query: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120

Query: 121 IYRASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 158
           I RASKYQASVWKASDRHP YLATDSESSDRRVKRD++R
Sbjct: 121 INRASKYQASVWKASDRHPAYLATDSESSDRRVKRDDIR 158

[Close]

BLAST of CSPI05G11270 vs. ExPASy TrEMBL
Match: A0A6J1K2L5 (uncharacterized protein LOC111491826 OS=Cucurbita maxima OX=3661 GN=LOC111491826 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.5e-54
Identity = 120/154 (77.92%), Postives = 128/154 (83.12%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVTSEPNKNKYM 60
           MAKSLP  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRV SEP + K  
Sbjct: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQPK-K 60

Query: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120

Query: 121 IYRASKYQASVWKASDRHPGYLATDSESSDRRVK 153
           I RASKYQASV KASDRHPGYLATDSESSDRRVK
Sbjct: 121 ISRASKYQASVRKASDRHPGYLATDSESSDRRVK 153

[Close]

BLAST of CSPI05G11270 vs. ExPASy TrEMBL
Match: A0A6J1GZI5 (uncharacterized protein LOC111458931 OS=Cucurbita moschata OX=3662 GN=LOC111458931 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.6e-53
Identity = 119/159 (74.84%), Postives = 128/159 (80.50%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQS-QPK-KSRIRASPSETPISGSVRVTSEPNKNKYM 60
           MAKSLPS    QQFAK+   SK PQS  PK KSRIR SPSETPI  +VRV SEP K    
Sbjct: 1   MAKSLPSATHLQQFAKIAVFSKKPQSAAPKPKSRIRVSPSETPIPDTVRVISEPKKKNM- 60

Query: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120
             EEKNR PLADVVSDCVKRWFQDTLKEA AGD +MQVLVGQMFCSGYGVPK+TKKGLAW
Sbjct: 61  --EEKNRVPLADVVSDCVKRWFQDTLKEASAGDPAMQVLVGQMFCSGYGVPKDTKKGLAW 120

Query: 121 IYRASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 158
           I RASK QA V + SDRHPGYLATDSE S+RRVK+D++R
Sbjct: 121 INRASKGQAPVGEVSDRHPGYLATDSEPSNRRVKQDDIR 156

[Close]

BLAST of CSPI05G11270 vs. NCBI nr
Match: XP_004146456.1 (uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus] >XP_031741805.1 uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus] >KGN50710.1 hypothetical protein Csa_005851 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 5.0e-81
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVTSEPNKNKYMEE 60
           MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRV SEPNKNKYMEE
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 158
           RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR
Sbjct: 121 RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 157

[Close]

BLAST of CSPI05G11270 vs. NCBI nr
Match: XP_004146455.1 (uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus])

HSP 1 Score: 297.7 bits (761), Expect = 5.8e-77
Identity = 156/181 (86.19%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVTSEPNKNKYMEE 60
           MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRV SEPNKNKYMEE
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHP------------------------GYLATDSESSDRRVKRDNV 158
           RASKYQASVWKASDRHP                        GYLATDSESSDRRVKRDNV
Sbjct: 121 RASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRDNV 180

[Close]

BLAST of CSPI05G11270 vs. NCBI nr
Match: XP_008456900.1 (PREDICTED: uncharacterized protein LOC103496713 [Cucumis melo] >XP_008456901.1 PREDICTED: uncharacterized protein LOC103496713 [Cucumis melo])

HSP 1 Score: 291.2 bits (744), Expect = 5.4e-75
Identity = 145/157 (92.36%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVTSEPNKNKYMEE 60
           MAKSLPSP RFQQFAKLVFSSKNPQS PKKSRIRASPSETPISGSVRV  EPNKNKYMEE
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPPKKSRIRASPSETPISGSVRVILEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           +EKNRTPL+DVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  KEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 158
           RASKYQ SVWKAS+RHPGYLATDSESS+RRVKR++ R
Sbjct: 121 RASKYQPSVWKASERHPGYLATDSESSNRRVKRNDFR 157

[Close]

BLAST of CSPI05G11270 vs. NCBI nr
Match: XP_023552657.1 (uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo] >XP_023552666.1 uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-57
Identity = 123/159 (77.36%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVTSEPNKNKYM 60
           MAKSLP  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRV SEP + K  
Sbjct: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPK-K 60

Query: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120

Query: 121 IYRASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 158
           I RASKYQASVWKASDRHP YLATDSESSDRRVKRD++R
Sbjct: 121 INRASKYQASVWKASDRHPAYLATDSESSDRRVKRDDIR 158

[Close]

BLAST of CSPI05G11270 vs. NCBI nr
Match: XP_022941871.1 (uncharacterized protein LOC111447103 [Cucurbita moschata] >XP_022941872.1 uncharacterized protein LOC111447103 [Cucurbita moschata] >KAG6599959.1 hypothetical protein SDJN03_05192, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-56
Identity = 122/159 (76.73%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVTSEPNKNKYM 60
           MAKS P  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRV SEP + K  
Sbjct: 1   MAKSFPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPK-K 60

Query: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120

Query: 121 IYRASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 158
           I RASKYQASVWKASDRHP YLATDSESSDRRVKRD++R
Sbjct: 121 INRASKYQASVWKASDRHPAYLATDSESSDRRVKRDDIR 158

[Close]

BLAST of CSPI05G11270 vs. TAIR 10
Match: AT5G05360.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 84 Blast hits to 84 proteins in 24 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 128.3 bits (321), Expect = 5.6e-30
Identity = 74/160 (46.25%), Postives = 98/160 (61.25%), Query Frame = 0


Query: 7   SPARFQQFAKLVFSSKN------PQSQPK-----KSRIRASPSETPISGSVRVT-----S 66
           S  RF +FA +  SS+N      P   P+     K   R + S    S  V++      S
Sbjct: 4   SMVRFAEFA-IRLSSENPTRPHRPSPSPRNKVFVKKTTRDTTSHLDYSNLVKLEKAGSHS 63

Query: 67  EPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPK 126
             N       +  NR PLA VV DCV+RWFQDTLKEAK+GD  MQVLVGQM+CSGYG+PK
Sbjct: 64  GSNPAPASGSDPINRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPK 123

Query: 127 NTKKGLAWIYRASKYQASVWKASDRHPGYLATDSESSDRR 151
           +  KG AWI +AS+ ++S W+ SD+ PGY A+DS+S+D++
Sbjct: 124 DENKGRAWINKASRTRSSAWQVSDKPPGYNASDSDSNDKK 162

[Close]

BLAST of CSPI05G11270 vs. TAIR 10
Match: AT2G38450.1 (CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05360.1); Has 88 Blast hits to 88 proteins in 25 species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 118.6 bits (296), Expect = 4.5e-27
Identity = 57/114 (50.00%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 33  IRASPSETPISGSVRVTSEPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDT 92
           I++S    PIS       + +      E  +   PL+ VVSDC KRWF+DTL+EAKAG+ 
Sbjct: 22  IKSSKPIRPISSMDSSDKDSSSTTTTSETTRRFVPLSSVVSDCAKRWFKDTLEEAKAGNI 81

Query: 93  SMQVLVGQMFCSGYGVPKNTKKGLAWIYRASKYQASVWKASDRHPGYLATDSES 147
           +MQVL+GQM+ SGYGVPK+ +KG  WI +AS+ ++SVWK  D+ PGY A+DS+S
Sbjct: 82  TMQVLLGQMYYSGYGVPKDARKGRLWITKASRVRSSVWKVIDKRPGYNASDSDS 135

[Close]

BLAST of CSPI05G11270 vs. TAIR 10
Match: AT5G05360.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 114.8 bits (286), Expect = 6.4e-26
Identity = 68/148 (45.95%), Postives = 87/148 (58.78%), Query Frame = 0


Query: 7   SPARFQQFAKLVFSSKN------PQSQPK-----KSRIRASPSETPISGSVRVT-----S 66
           S  RF +FA +  SS+N      P   P+     K   R + S    S  V++      S
Sbjct: 4   SMVRFAEFA-IRLSSENPTRPHRPSPSPRNKVFVKKTTRDTTSHLDYSNLVKLEKAGSHS 63

Query: 67  EPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPK 126
             N       +  NR PLA VV DCV+RWFQDTLKEAK+GD  MQVLVGQM+CSGYG+PK
Sbjct: 64  GSNPAPASGSDPINRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPK 123

Query: 127 NTKKGLAWIYRASKYQASVWKASDRHPG 139
           +  KG AWI +AS+ ++S W+ SD+ PG
Sbjct: 124 DENKGRAWINKASRTRSSAWQVSDKPPG 150

The following BLAST results are available for this feature:

BLAST of CSPI05G11270 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G11270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM25	2.4e-81	99.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218760 PE=4 SV=1	[more]
A0A1S3C493	2.6e-75	92.36	uncharacterized protein LOC103496713 OS=Cucumis melo OX=3656 GN=LOC103496713 PE=...	[more]
A0A6J1FNN7	5.5e-57	76.73	uncharacterized protein LOC111447103 OS=Cucurbita moschata OX=3662 GN=LOC1114471...	[more]
A0A6J1K2L5	2.5e-54	77.92	uncharacterized protein LOC111491826 OS=Cucurbita maxima OX=3661 GN=LOC111491826...	[more]
A0A6J1GZI5	1.6e-53	74.84	uncharacterized protein LOC111458931 OS=Cucurbita moschata OX=3662 GN=LOC1114589...	[more]

BLAST of CSPI05G11270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146456.1	5.0e-81	99.36	uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus] >XP_031741805....	[more]
XP_004146455.1	5.8e-77	86.19	uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus]	[more]
XP_008456900.1	5.4e-75	92.36	PREDICTED: uncharacterized protein LOC103496713 [Cucumis melo] >XP_008456901.1 P...	[more]
XP_023552657.1	3.9e-57	77.36	uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo] >XP_023552666....	[more]
XP_022941871.1	1.1e-56	76.73	uncharacterized protein LOC111447103 [Cucurbita moschata] >XP_022941872.1 unchar...	[more]

BLAST of CSPI05G11270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05360.1	5.6e-30	46.25	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]
AT2G38450.1	4.5e-27	50.00	CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597); BEST Arabidopsis tha...	[more]
AT5G05360.2	6.4e-26	45.95	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 48..133 e-value: 3.6E-5 score: 25.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..157
None	No IPR available	PANTHER	PTHR36792	EXPRESSED PROTEIN	coord: 1..150
None	No IPR available	PANTHER	PTHR36792:SF6	TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..150
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 84..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G11270.1	CSPI05G11270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding