CSPI05G11030 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G11030
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	40S ribosomal protein S4
Location	Chr5: 9576370 .. 9579006 (+)
RNA-Seq Expression	CSPI05G11030
Synteny	CSPI05G11030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAACTCAAACTCTTTAGTCTCTACCCCTGCAGCGGCCGGCCATCTTCTCCTCATCTGCTCCGTGGAACATCCCGTTTCGACAACATGGTAAGTGGATCCGTCCTCAATTCCAGAAATACGCACGCAATCGATGAGGTTTTCCGATTAAATTAATGTGTATGTATGGGTTTGACAGGCGAGGGGTTTGAAGAAACACTTGAAGAGGCTTAATGCTCCCAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGTGAGTTTAATTTTTATAGTCTCTGATTTTTGTGTACTTTTAGTTCTGTGGTTTTGATGTTGAGTCCCTTTTGTAGGCCCCAAAACCTTCATCAGGACCTCACAAATCAAGGGAATGTCTCCCATTAATCCTCATATTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTTATTGCAATTTTGATGCAACGCCATGTTTTGGTTGATGCCAAGGTCAGGACTGATAAGACCTATCCAGCTGGTTTCATGGGTATGCTCATCTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAAACTCAATATTGCTTTTATTTGAATAATTGTTGGGTGTTGCATTCTTCGTCTATCATCTAAATTTTAGTTTTAAGGGTATATGGGGAGTTTCAACTTTTGCTTCAATGCTGACTTGCTTCCAACATAACTCAAAAACATTTTTTTAATGAATATTTCGACCGTCAAAACTACTCTTTCATACAAATGGGGAATGCATCTTCAACTCTATCACCAATCTTACTATTTGCTGCTAACAAACACTTGCGGTCACTTGTTATTGCATGGAAATTGTTTGTTTGGAACTGCTCTGTCTCCTAGTTATTGTATAGTATGCATTCTGTTTAATAGTTTTATAGGCTTAACAATTCTATTTGTTCTAGATGTTGTGTCCATTCCCAAAACAAGCGAGAATTTCCGGCTTCTTTACGACACTAAAGGTCGTTTCCGTCTTCACTCAATCAGGGATGAAGAGGCTAAGGTTTGTTATTTTCACTTATTATTTCTTACGACAATTCTGTTTATAGAATCAGAATGAATGTATGCTGCCCAAGTAAATACCATATCTTAAAACTGTTTTGAACTTTTCTATATCACTTTTGTAAGTCAACTGTATAGTTGTTTAATATCTGTTAGGCCACCAATTATCCTTCAATATAGGAAGAGGCAAGTCAGTATGTTTAAGAGTGATTCTGGAATGTTTAAAATGTATTTGATCACACAAAATAAAATTAATATTAAATTTTATATTTCTAAATGCAACTTTCATCTGATGAAAATTGATATTGAATGATGAAAAGCATATTTCAGAATTCATAGTACTCTTGAGGTGACAAATCTGATTTTAATCATATCGAAATCACTCTTGTACATGACTTAGTTACATGGGAACGATTTACAGCTTTAATGCTGGCATTGTTGGGTGCGGATGATTAATAGAAAGGGGAAGTTGTTTGTACGAGTAGAAGGGAGCAGTAGTATAAATATATGAGAATTGGGGAGGCTCTCATCTTTTTCATTTTATGCTTTTGGCATCAGAGAACTTGTATTGCCTTAGGAAAATTTCCTTTTCAATACTAATACATAGTGACGGTGATCCTTACAATGCCATTTGATATGGTCTTTGCAGTTCAAGCTTTGTAAGGTACGCTCAGTGCAGTTTGGGCAGAAGGGAATCCCTTATCTGAACACATATGATGGGCGTACAATCCGTTACCCTGACCCTCTAATCAAGGCAAACGACACCATCAAGTTGGATCTCGAGTCAAACAAAATTGCTGATTTCATTAAGTTTGACGTAGGAAATGTTGTAATGGTGACTGGTGGAAGAAACAGAGGGCGAGTGGGAGTAATTAAGAACAGAGAGAAGCACAAGGGAAGCTTTGAGACAATTCACATACAGGATGCAACCGGGCACGAATTTGCCACTCGGCTTGGCAATGTGTTTACAATTGGGAAGGGGACAAAGCCATGGGTTTCCCTCCCCAAGGGTAAGGGTATCAAACTAACCATCATTGAAGAAGCCAGGAAGAGGCTTGCTAGCCAATCAGCAGTTACTGCTTAAGAGTTTTGAGTTATTACTAAATTGTAGTCATGAGTTTTCTTAATCCGTTTTGATAGACACAATATCTTTCTCGAATTTTGCTCTCTTATTATTTATGGCTAAGTTCCTCTTGTGAGACAATTTGTTTATGCCATAAATTTTGAGGGGGCCATTTGCTTCTGTGATTTTGTTGTTAAAGAGAACGCCGTTAGCTTATTTGTTAGTTGTGTTGTGACTCTGCTCTATAGTCTCAATTATTATCTATAGTCAGTATTTCTTCGAAGAACATTAGTAAAATACTCTTTTGGTTTAGTTAGGTTGGAGTCTGGTTTCTATTTTAATCTTAGGCTTCGAAACTTCAAAATGGTCCTTGTTGGTTT

mRNA sequence

CTTAAACTCAAACTCTTTAGTCTCTACCCCTGCAGCGGCCGGCCATCTTCTCCTCATCTGCTCCGTGGAACATCCCGTTTCGACAACATGGCGAGGGGTTTGAAGAAACACTTGAAGAGGCTTAATGCTCCCAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCAAAACCTTCATCAGGACCTCACAAATCAAGGGAATGTCTCCCATTAATCCTCATATTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTTATTGCAATTTTGATGCAACGCCATGTTTTGGTTGATGCCAAGGTCAGGACTGATAAGACCTATCCAGCTGGTTTCATGGATGTTGTGTCCATTCCCAAAACAAGCGAGAATTTCCGGCTTCTTTACGACACTAAAGGTCGTTTCCGTCTTCACTCAATCAGGGATGAAGAGGCTAAGTTCAAGCTTTGTAAGGTACGCTCAGTGCAGTTTGGGCAGAAGGGAATCCCTTATCTGAACACATATGATGGGCGTACAATCCGTTACCCTGACCCTCTAATCAAGGCAAACGACACCATCAAGTTGGATCTCGAGTCAAACAAAATTGCTGATTTCATTAAGTTTGACGTAGGAAATGTTGTAATGGTGACTGGTGGAAGAAACAGAGGGCGAGTGGGAGTAATTAAGAACAGAGAGAAGCACAAGGGAAGCTTTGAGACAATTCACATACAGGATGCAACCGGGCACGAATTTGCCACTCGGCTTGGCAATGTGTTTACAATTGGGAAGGGGACAAAGCCATGGGTTTCCCTCCCCAAGGGTAAGGGTATCAAACTAACCATCATTGAAGAAGCCAGGAAGAGGCTTGCTAGCCAATCAGCAGTTACTGCTTAAGAGTTTTGAGTTATTACTAAATTGTAGTCATGAGTTTTCTTAATCCGTTTTGATAGACACAATATCTTTCTCGAATTTTGCTCTCTTATTATTTATGGCTAAGTTCCTCTTGTGAGACAATTTGTTTATGCCATAAATTTTGAGGGGGCCATTTGCTTCTGTGATTTTGTTGTTAAAGAGAACGCCGTTAGCTTATTTGTTAGTTGTGTTGTGACTCTGCTCTATAGTCTCAATTATTATCTATAGTCAGTATTTCTTCGAAGAACATTAGTAAAATACTCTTTTGGTTTAGTTAGGTTGGAGTCTGGTTTCTATTTTAATCTTAGGCTTCGAAACTTCAAAATGGTCCTTGTTGGTTT

Coding sequence (CDS)

ATGGCGAGGGGTTTGAAGAAACACTTGAAGAGGCTTAATGCTCCCAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCAAAACCTTCATCAGGACCTCACAAATCAAGGGAATGTCTCCCATTAATCCTCATATTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTTATTGCAATTTTGATGCAACGCCATGTTTTGGTTGATGCCAAGGTCAGGACTGATAAGACCTATCCAGCTGGTTTCATGGATGTTGTGTCCATTCCCAAAACAAGCGAGAATTTCCGGCTTCTTTACGACACTAAAGGTCGTTTCCGTCTTCACTCAATCAGGGATGAAGAGGCTAAGTTCAAGCTTTGTAAGGTACGCTCAGTGCAGTTTGGGCAGAAGGGAATCCCTTATCTGAACACATATGATGGGCGTACAATCCGTTACCCTGACCCTCTAATCAAGGCAAACGACACCATCAAGTTGGATCTCGAGTCAAACAAAATTGCTGATTTCATTAAGTTTGACGTAGGAAATGTTGTAATGGTGACTGGTGGAAGAAACAGAGGGCGAGTGGGAGTAATTAAGAACAGAGAGAAGCACAAGGGAAGCTTTGAGACAATTCACATACAGGATGCAACCGGGCACGAATTTGCCACTCGGCTTGGCAATGTGTTTACAATTGGGAAGGGGACAAAGCCATGGGTTTCCCTCCCCAAGGGTAAGGGTATCAAACTAACCATCATTGAAGAAGCCAGGAAGAGGCTTGCTAGCCAATCAGCAGTTACTGCTTAA

Protein sequence

MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQSAVTA*

Homology

[Close]

BLAST of CSPI05G11030 vs. ExPASy Swiss-Prot
Match: Q8VYK6 (40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2)

HSP 1 Score: 508.4 bits (1308), Expect = 4.7e-143
Identity = 245/261 (93.87%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of CSPI05G11030 vs. ExPASy Swiss-Prot
Match: P49204 (40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4)

HSP 1 Score: 508.1 bits (1307), Expect = 6.2e-143
Identity = 245/261 (93.87%), Postives = 255/261 (97.70%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of CSPI05G11030 vs. ExPASy Swiss-Prot
Match: P46300 (40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 6.2e-143
Identity = 245/264 (92.80%), Postives = 258/264 (97.73%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQR V+VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61  VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKGIKLTIIE+ARKRLA+QSA  A
Sbjct: 241 GKGIKLTIIEDARKRLAAQSATPA 264

[Close]

BLAST of CSPI05G11030 vs. ExPASy Swiss-Prot
Match: Q93VH9 (40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 3.1e-142
Identity = 243/261 (93.10%), Postives = 255/261 (97.70%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]

BLAST of CSPI05G11030 vs. ExPASy Swiss-Prot
Match: P46299 (40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 4.9e-140
Identity = 243/261 (93.10%), Postives = 253/261 (96.93%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHV+VD KVRTDKTYPAGFMDVVSIPKT+E+FRLLYDTKGRF LH+I  +E K
Sbjct: 61  VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
            KGIKL+IIEEARKRLA+Q+A
Sbjct: 241 RKGIKLSIIEEARKRLAAQNA 261

[Close]

BLAST of CSPI05G11030 vs. ExPASy TrEMBL
Match: A0A0A0KQK7 (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_5G212590 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.1e-147
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKGIKLTIIEEARKRLASQSAVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQSAVTA 264

[Close]

BLAST of CSPI05G11030 vs. ExPASy TrEMBL
Match: A0A1S3BZK5 (40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103495134 PE=3 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.5e-147
Identity = 263/264 (99.62%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKGIKLTIIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI05G11030 vs. ExPASy TrEMBL
Match: A0A5D3D653 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00020 PE=3 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.5e-147
Identity = 263/264 (99.62%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKGIKLTIIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI05G11030 vs. ExPASy TrEMBL
Match: A0A6J1D0L7 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145
Identity = 257/264 (97.35%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKG+KL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGVKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI05G11030 vs. ExPASy TrEMBL
Match: A0A0A0K4K7 (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.4e-145
Identity = 257/264 (97.35%), Postives = 263/264 (99.62%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKTSENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKGIKL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI05G11030 vs. NCBI nr
Match: XP_011655007.1 (40S ribosomal protein S4-3 [Cucumis sativus] >XP_011655009.1 40S ribosomal protein S4-3 [Cucumis sativus] >KGN50688.1 hypothetical protein Csa_005820 [Cucumis sativus] >KGN50692.1 hypothetical protein Csa_005872 [Cucumis sativus])

HSP 1 Score: 532.3 bits (1370), Expect = 2.3e-147
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKGIKLTIIEEARKRLASQSAVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQSAVTA 264

[Close]

BLAST of CSPI05G11030 vs. NCBI nr
Match: XP_008454823.1 (PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo] >XP_008454824.1 PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo] >KAA0035892.1 40S ribosomal protein S4-3 [Cucumis melo var. makuwa] >TYK19047.1 40S ribosomal protein S4-3 [Cucumis melo var. makuwa])

HSP 1 Score: 531.2 bits (1367), Expect = 5.2e-147
Identity = 263/264 (99.62%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKGIKLTIIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLTIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI05G11030 vs. NCBI nr
Match: XP_038891309.1 (40S ribosomal protein S4-3-like [Benincasa hispida])

HSP 1 Score: 526.9 bits (1356), Expect = 9.8e-146
Identity = 260/264 (98.48%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIP+LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKGIKL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI05G11030 vs. NCBI nr
Match: XP_038893437.1 (40S ribosomal protein S4-3-like [Benincasa hispida])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 260/264 (98.48%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+E+FRLLYDTKGRFRLHSIRDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHSIRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKGIKL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI05G11030 vs. NCBI nr
Match: XP_022146851.1 (40S ribosomal protein S4-3-like [Momordica charantia])

HSP 1 Score: 525.4 bits (1352), Expect = 2.8e-145
Identity = 257/264 (97.35%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSAVTA 265
           GKG+KL+IIEEARKRLASQ+AVTA
Sbjct: 241 GKGVKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of CSPI05G11030 vs. TAIR 10
Match: AT5G58420.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 508.4 bits (1308), Expect = 3.4e-144
Identity = 245/261 (93.87%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of CSPI05G11030 vs. TAIR 10
Match: AT5G07090.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 508.1 bits (1307), Expect = 4.4e-144
Identity = 245/261 (93.87%), Postives = 255/261 (97.70%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of CSPI05G11030 vs. TAIR 10
Match: AT2G17360.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 505.8 bits (1301), Expect = 2.2e-143
Identity = 243/261 (93.10%), Postives = 255/261 (97.70%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 241 GKGIKLTIIEEARKRLASQSA 262
           GKGIKLTIIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]

BLAST of CSPI05G11030 vs. TAIR 10
Match: AT5G07090.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-132
Identity = 227/243 (93.42%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 19  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRT 78
           MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VD KVRT
Sbjct: 1   MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60

Query: 79  DKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPY 138
           DKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAKFKLCKVRS+QFGQKGIPY
Sbjct: 61  DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120

Query: 139 LNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
           LNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180

Query: 199 EKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 258
           EKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240

Query: 259 QSA 262
           Q A
Sbjct: 241 QQA 243

[Close]

BLAST of CSPI05G11030 vs. TAIR 10
Match: AT2G17360.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 349.0 bits (894), Expect = 3.4e-96
Identity = 166/181 (91.71%), Postives = 174/181 (96.13%), Query Frame = 0


Query: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120
           VI+ILMQRH+ VD KVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180
           FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVG  
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKC 180

Query: 181 V 182
           V
Sbjct: 181 V 181

The following BLAST results are available for this feature:

BLAST of CSPI05G11030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYK6	4.7e-143	93.87	40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2	[more]
P49204	6.2e-143	93.87	40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4	[more]
P46300	6.2e-143	92.80	40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1	[more]
Q93VH9	3.1e-142	93.10	40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1	[more]
P46299	4.9e-140	93.10	40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1	[more]

BLAST of CSPI05G11030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQK7	1.1e-147	100.00	40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_5G212590 PE=3 SV=1	[more]
A0A1S3BZK5	2.5e-147	99.62	40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103495134 PE=3 SV=1	[more]
A0A5D3D653	2.5e-147	99.62	40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1D0L7	1.4e-145	97.35	40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=...	[more]
A0A0A0K4K7	2.4e-145	97.35	40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1	[more]

BLAST of CSPI05G11030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655007.1	2.3e-147	100.00	40S ribosomal protein S4-3 [Cucumis sativus] >XP_011655009.1 40S ribosomal prote...	[more]
XP_008454823.1	5.2e-147	99.62	PREDICTED: 40S ribosomal protein S4-3 [Cucumis melo] >XP_008454824.1 PREDICTED: ...	[more]
XP_038891309.1	9.8e-146	98.48	40S ribosomal protein S4-3-like [Benincasa hispida]	[more]
XP_038893437.1	1.3e-145	98.48	40S ribosomal protein S4-3-like [Benincasa hispida]	[more]
XP_022146851.1	2.8e-145	97.35	40S ribosomal protein S4-3-like [Momordica charantia]	[more]

BLAST of CSPI05G11030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58420.1	3.4e-144	93.87	Ribosomal protein S4 (RPS4A) family protein	[more]
AT5G07090.1	4.4e-144	93.87	Ribosomal protein S4 (RPS4A) family protein	[more]
AT2G17360.1	2.2e-143	93.10	Ribosomal protein S4 (RPS4A) family protein	[more]
AT5G07090.2	1.7e-132	93.42	Ribosomal protein S4 (RPS4A) family protein	[more]
AT2G17360.2	3.4e-96	91.71	Ribosomal protein S4 (RPS4A) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005824	KOW	SMART	SM00739	kow_9	coord: 174..201 e-value: 7.7E-4 score: 28.8
IPR005824	KOW	PFAM	PF00467	KOW	coord: 177..210 e-value: 1.4E-6 score: 28.1
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 175..245 e-value: 1.7E-39 score: 135.5
IPR013843	Ribosomal protein S4e, N-terminal	PFAM	PF08071	RS4NT	coord: 3..39 e-value: 4.1E-19 score: 68.4
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 47..90 e-value: 2.7E-5 score: 23.8
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 51..112 e-value: 6.41987E-5 score: 38.3846
IPR038237	Ribosomal protein S4e, central domain superfamily	GENE3D	2.40.50.740		coord: 122..172 e-value: 2.3E-31 score: 109.3
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 1..117 e-value: 5.8E-61 score: 205.6
IPR032277	40S ribosomal protein S4, C-terminal domain	PFAM	PF16121	40S_S4_C	coord: 212..258 e-value: 5.2E-26 score: 90.1
IPR013845	Ribosomal protein S4e, central region	PFAM	PF00900	Ribosomal_S4e	coord: 95..169 e-value: 1.5E-35 score: 120.8
IPR000876	Ribosomal protein S4e	PIRSF	PIRSF002116	RPS4a_RPS4e	coord: 1..241 e-value: 1.9E-96 score: 319.9
IPR000876	Ribosomal protein S4e	PANTHER	PTHR11581	30S/40S RIBOSOMAL PROTEIN S4	coord: 221..264 coord: 2..220
IPR000876	Ribosomal protein S4e	HAMAP	MF_00485	Ribosomal_S4e	coord: 7..238 score: 36.115631
None	No IPR available	PANTHER	PTHR11581:SF33	40S RIBOSOMAL PROTEIN S4	coord: 221..264 coord: 2..220
IPR018199	Ribosomal protein S4e, N-terminal, conserved site	PROSITE	PS00528	RIBOSOMAL_S4E	coord: 8..22
IPR041982	Ribosomal protein S4, KOW domain	CDD	cd06087	KOW_RPS4	coord: 175..229 e-value: 7.14757E-31 score: 107.216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G11030.1	CSPI05G11030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding