
CSPI05G09850 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAATTTAATTTTACTATGAAAACATTAGACATTTTGGAGAATCATTAACTTTACTTCAATTTATGAAAAGGATAAATTTGTAGTTCAAACAGCTCTGATAAAAATTGATAGAAAATTGAGAAATAAATAAGCAAAGCCTTATTGTGGTTGTCGGCATCGGCAATTACTTCAGAGCCACCACGGAGAGAATTTCGGTGGCTGTTCTTCACCAACCCTTTTTCCTTTCCTTTTCTCTCCAATTTCCGATCTCCCAATTTTGAGGGGAGGAGTTGCCGGAAACTCTAAGTAACCTTTTCTCAGTCTTTCACCAAAATTCAGTCAAATATGAGTACGGTTTTCGAGGGTTACGAACGCCAATATTGTGAACTCTCCGCCAATGTTTCTCGGAAATCCAACTCTTTCGCCGCCTCCGATTCAGGTTTTTTATATATATTTCGCCTCTGGTTTCAACATAGATAGATGGGATAAGTAGAATTTGGTTGTTAGAATTTCGAAGAGAATCCCTAAATTGTGGTTGGAGATCTTTGAGCTACAATTGGTAGATGCTGGGTTTTCTAAACCGTGTGAGAAAGGATATGAATATGGAGTTGGGATGAATTTTAGTGGTTCTTACTGGTTCTTTAGAGTTAGATTGTGCAGAATTGGATTCTACTTTGGAAATGAACTGGAAAAAGAAGTTTATTATTGAGAGACTCTTATTTTGATCGTGAACTATTGGAATGTTTGGTGATTTTAACTTTATCTGAATTGCAGAGCAGAAACAGCAATGGCTTTCGGAAATCAAAGTTAGTTTGGATGAGGCTGAAGTTTTGGTATGTTTAAAGAGCCTCCTTTTGGCTTTCTTTCTTTTTCTTTTTCTTTTTCTTTTCAAGTTGGTTAAATTCATACTGATATGCATACAATGTTTAATCTTTATTGATTGATTCTCTAGATCCGAAAAATGGATCTTGAGGCTAGAAGTTTGCAGCCAGGGGTAAAAGCTACCCTACTTGCTAAGTTACGGGAGTACAAGGCTGATCTTGGAAAACTGAAAAAGGAATTTAAGAGATTGACAACACCTAATGCTGATCAGGCTGCTCGTGAAGAACTGCTGGAGTCTGGAATGGCAGATGCTCATTTGGTAGATTTTCATCGTTCATATTTTACAGTTGCCTTCAAGTTTTAAGTACTACATATACTCTTATCTCCTCACTAATGCTTCTTCAATCGTGAGTTGGGTTCTAAGTCTGGAAACAATTTGAGGGAGCTTATCGTTGATTGAAATGATTTTGTCTTTATGAGATAACATGAGTTTCATATCAAAACTAATTGGCAATGAGAGAAGTGACCAACATGTATGGTGGTTCTTTAGGTTCACTATTCTTAAATCTAATCCCAACTCTTGTTTTTGGATCAAATCTCTGTTAAGCTTCACAATACCATATTTAGATAACATAGGATTCCATTTCAAAACTTATTGACAATTAGCGAAGTAGCCAAACAGTCTTGAGATTTTGGCTATTTTAGTAGCCTATGTTTTAGGGTAAACTTAACTAGTTAAAACACTAATAACTTCCCTTGTAGGTTTGAATCTTCACTCCTATGTTTAAATGGTAATATCTTGTTAAAGTTATTGCATATCTTAAGTTCTCGGGATGGTTTTAGTCATATAAAGTAATGCTATAATCAATATGGTTGTCCCTTGGTGTAAATTCTCCCCACTTTTCTCCGTCCTTTTCAATTGGAAGTTTTTTTAAACTCCATCAATGAGAATTTCCCTTTAATAGTTTTTCCTCTTTTGGTATTTCATACCGTCATTGAAATTGAAAGTGCTCCGGAAACATGAGAGTTGCTATAGAACTTTCTATTTAATAAACCTTTGCAATATGATCATCTTATCGAGTCTTTATTTTTCTTCAACCACTCTTTTGATTGAAGTGATGATGGTTTCTAAGCTTTGTTGATAGACAGTACTTATCTTTTCCTCTCTCAATGGCTGTGTGAGGTCTCAATAATTCAAACGGAATCTGTTTCATGAGTTAGTGTCAGTTTCTGGTTGTGTTTCTATTATATAGCATCATGTGAATTTCCATCATGTATCAATGGCATATCTCGTATATATAGATATTGTTTTAGTTTCAATAATTCGTCATTTGAAATAAAGTATATTTGTCTTCCATAGGTTTAATTTTAAATTGTTATTATATTTACTGACATTCTTACAGGCCTCAGCTGATCAAAGAGAGAGGATGACAATGTCCATAGAGAGAATAAATCAGTCAGGTGAAAGAATCACAGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTCCAGGACTTGCATCAACAGCGGGAAACTCTCCTCCAGTCCCATAAGAGAGTAAGTTTTGTCTTGATATTTGATATTATGTTCTGGCTGAGTATTAAGTCCAATTTTTGATGTCATTAACATCCTTAAACTCCATAAGATGCATAGATACAAACTTGGTTCCTAACTATGAGCATCCTTAAACTTCATTTTAAAAGAAAAAATTCCTTAAACTTAACACACACATTTTAATTTCTATCCCTTTTAAGCATCCTTGGGATAGTTCCACTGTTAACAACATGGTTCAATGTTACAGCTTCATGGGGTAGATGATGCCATTGATAAGAGTAAAAAAGTTTTAACCACAATGTCTCGAAGAATCAGTCGAAATAAATGGATCGTCGGGTCAGTAATTGGGGTTCTGGTACTTGTAATTATCATTATACTGTATTTTAAGCTCTAATATCATCATTGAGATGTTTCCTTGATCACAAAATGAATTCTACTCCGATCATTTTAGTTTCCAATCTTACACTTGGTTGTCAATCATATATTTGTTGTATTTTGTTGTCAGTGTACGGTGTTCGTGTCTGTAATTGAATCAAAATATTGAAACTCGATAGCATTTTAATCAATCAATACCCAGTAGTTGGCACTTCTTGATGACTACTTAGTACCTTCCCTATTTGCACTTAGGGAAGTACAATAATT TAAAATTTAATTTTACTATGAAAACATTAGACATTTTGGAGAATCATTAACTTTACTTCAATTTATGAAAAGGATAAATTTGTAGTTCAAACAGCTCTGATAAAAATTGATAGAAAATTGAGAAATAAATAAGCAAAGCCTTATTGTGGTTGTCGGCATCGGCAATTACTTCAGAGCCACCACGGAGAGAATTTCGGTGGCTGTTCTTCACCAACCCTTTTTCCTTTCCTTTTCTCTCCAATTTCCGATCTCCCAATTTTGAGGGGAGGAGTTGCCGGAAACTCTAAGTAACCTTTTCTCAGTCTTTCACCAAAATTCAGTCAAATATGAGTACGGTTTTCGAGGGTTACGAACGCCAATATTGTGAACTCTCCGCCAATGTTTCTCGGAAATCCAACTCTTTCGCCGCCTCCGATTCAGAGCAGAAACAGCAATGGCTTTCGGAAATCAAAGTTAGTTTGGATGAGGCTGAAGTTTTGATCCGAAAAATGGATCTTGAGGCTAGAAGTTTGCAGCCAGGGGTAAAAGCTACCCTACTTGCTAAGTTACGGGAGTACAAGGCTGATCTTGGAAAACTGAAAAAGGAATTTAAGAGATTGACAACACCTAATGCTGATCAGGCTGCTCGTGAAGAACTGCTGGAGTCTGGAATGGCAGATGCTCATTTGGCCTCAGCTGATCAAAGAGAGAGGATGACAATGTCCATAGAGAGAATAAATCAGTCAGGTGAAAGAATCACAGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTCCAGGACTTGCATCAACAGCGGGAAACTCTCCTCCAGTCCCATAAGAGACTTCATGGGGTAGATGATGCCATTGATAAGAGTAAAAAAGTTTTAACCACAATGTCTCGAAGAATCAGTCGAAATAAATGGATCGTCGGGTCAGTAATTGGGGTTCTGGTACTTGTAATTATCATTATACTGTATTTTAAGCTCTAATATCATCATTGAGATGTTTCCTTGATCACAAAATGAATTCTACTCCGATCATTTTAGTTTCCAATCTTACACTTGGTTGTCAATCATATATTTGTTGTATTTTGTTGTCAGTGTACGGTGTTCGTGTCTGTAATTGAATCAAAATATTGAAACTCGATAGCATTTTAATCAATCAATACCCAGTAGTTGGCACTTCTTGATGACTACTTAGTACCTTCCCTATTTGCACTTAGGGAAGTACAATAATT ATGAGTACGGTTTTCGAGGGTTACGAACGCCAATATTGTGAACTCTCCGCCAATGTTTCTCGGAAATCCAACTCTTTCGCCGCCTCCGATTCAGAGCAGAAACAGCAATGGCTTTCGGAAATCAAAGTTAGTTTGGATGAGGCTGAAGTTTTGATCCGAAAAATGGATCTTGAGGCTAGAAGTTTGCAGCCAGGGGTAAAAGCTACCCTACTTGCTAAGTTACGGGAGTACAAGGCTGATCTTGGAAAACTGAAAAAGGAATTTAAGAGATTGACAACACCTAATGCTGATCAGGCTGCTCGTGAAGAACTGCTGGAGTCTGGAATGGCAGATGCTCATTTGGCCTCAGCTGATCAAAGAGAGAGGATGACAATGTCCATAGAGAGAATAAATCAGTCAGGTGAAAGAATCACAGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTCCAGGACTTGCATCAACAGCGGGAAACTCTCCTCCAGTCCCATAAGAGACTTCATGGGGTAGATGATGCCATTGATAAGAGTAAAAAAGTTTTAACCACAATGTCTCGAAGAATCAGTCGAAATAAATGGATCGTCGGGTCAGTAATTGGGGTTCTGGTACTTGTAATTATCATTATACTGTATTTTAAGCTCTAA MSTVFEGYERQYCELSANVSRKSNSFAASDSEQKQQWLSEIKVSLDEAEVLIRKMDLEARSLQPGVKATLLAKLREYKADLGKLKKEFKRLTTPNADQAAREELLESGMADAHLASADQRERMTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRLHGVDDAIDKSKKVLTTMSRRISRNKWIVGSVIGVLVLVIIIILYFKL* Homology
BLAST of CSPI05G09850 vs. ExPASy Swiss-Prot
Match: Q9SEL5 (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3) HSP 1 Score: 272.3 bits (695), Expect = 4.7e-72 Identity = 147/220 (66.82%), Postives = 184/220 (83.64%), Query Frame = 0
BLAST of CSPI05G09850 vs. ExPASy Swiss-Prot
Match: Q9LVP9 (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.2e-67 Identity = 138/219 (63.01%), Postives = 176/219 (80.37%), Query Frame = 0
BLAST of CSPI05G09850 vs. ExPASy Swiss-Prot
Match: Q9SEL6 (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2) HSP 1 Score: 255.0 bits (650), Expect = 7.8e-67 Identity = 135/219 (61.64%), Postives = 177/219 (80.82%), Query Frame = 0
BLAST of CSPI05G09850 vs. ExPASy Swiss-Prot
Match: O89116 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus OX=10090 GN=Vti1a PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 9.0e-23 Identity = 69/213 (32.39%), Postives = 125/213 (58.69%), Query Frame = 0
BLAST of CSPI05G09850 vs. ExPASy Swiss-Prot
Match: Q96AJ9 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens OX=9606 GN=VTI1A PE=1 SV=2) HSP 1 Score: 107.1 bits (266), Expect = 2.6e-22 Identity = 66/214 (30.84%), Postives = 126/214 (58.88%), Query Frame = 0
BLAST of CSPI05G09850 vs. ExPASy TrEMBL
Match: A0A0A0KLX2 (PH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182770 PE=3 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CSPI05G09850 vs. ExPASy TrEMBL
Match: A0A1S3CFT2 (vesicle transport v-SNARE 12-like OS=Cucumis melo OX=3656 GN=LOC103500237 PE=3 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105 Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0
BLAST of CSPI05G09850 vs. ExPASy TrEMBL
Match: A0A6J1K4T5 (vesicle transport v-SNARE 12-like OS=Cucurbita maxima OX=3661 GN=LOC111491702 PE=3 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 4.3e-100 Identity = 203/219 (92.69%), Postives = 211/219 (96.35%), Query Frame = 0
BLAST of CSPI05G09850 vs. ExPASy TrEMBL
Match: A0A6J1FWM6 (vesicle transport v-SNARE 12-like OS=Cucurbita moschata OX=3662 GN=LOC111448046 PE=3 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 4.7e-99 Identity = 201/219 (91.78%), Postives = 210/219 (95.89%), Query Frame = 0
BLAST of CSPI05G09850 vs. ExPASy TrEMBL
Match: A0A6J1CB35 (vesicle transport v-SNARE 12-like OS=Momordica charantia OX=3673 GN=LOC111009979 PE=3 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 6.4e-96 Identity = 196/219 (89.50%), Postives = 207/219 (94.52%), Query Frame = 0
BLAST of CSPI05G09850 vs. NCBI nr
Match: XP_004147677.1 (vesicle transport v-SNARE 12 [Cucumis sativus] >KGN50573.1 hypothetical protein Csa_021465 [Cucumis sativus]) HSP 1 Score: 401.0 bits (1029), Expect = 6.7e-108 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CSPI05G09850 vs. NCBI nr
Match: XP_008461698.1 (PREDICTED: vesicle transport v-SNARE 12-like [Cucumis melo]) HSP 1 Score: 392.5 bits (1007), Expect = 2.4e-105 Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0
BLAST of CSPI05G09850 vs. NCBI nr
Match: XP_038889496.1 (vesicle transport v-SNARE 12-like [Benincasa hispida]) HSP 1 Score: 387.5 bits (994), Expect = 7.7e-104 Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 0
BLAST of CSPI05G09850 vs. NCBI nr
Match: XP_022996461.1 (vesicle transport v-SNARE 12-like [Cucurbita maxima]) HSP 1 Score: 374.0 bits (959), Expect = 8.8e-100 Identity = 203/219 (92.69%), Postives = 211/219 (96.35%), Query Frame = 0
BLAST of CSPI05G09850 vs. NCBI nr
Match: XP_023528822.1 (vesicle transport v-SNARE 12-like [Cucurbita pepo subsp. pepo] >KAG7030705.1 Vesicle transport v-SNARE 12 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 371.7 bits (953), Expect = 4.4e-99 Identity = 202/219 (92.24%), Postives = 210/219 (95.89%), Query Frame = 0
BLAST of CSPI05G09850 vs. TAIR 10
Match: AT1G26670.1 (Vesicle transport v-SNARE family protein ) HSP 1 Score: 272.3 bits (695), Expect = 3.4e-73 Identity = 147/220 (66.82%), Postives = 184/220 (83.64%), Query Frame = 0
BLAST of CSPI05G09850 vs. TAIR 10
Match: AT5G39510.1 (Vesicle transport v-SNARE family protein ) HSP 1 Score: 255.0 bits (650), Expect = 5.5e-68 Identity = 135/219 (61.64%), Postives = 177/219 (80.82%), Query Frame = 0
BLAST of CSPI05G09850 vs. TAIR 10
Match: AT3G29100.1 (vesicle transport V-snare 13 ) HSP 1 Score: 202.6 bits (514), Expect = 3.3e-52 Identity = 106/168 (63.10%), Postives = 138/168 (82.14%), Query Frame = 0
BLAST of CSPI05G09850 vs. TAIR 10
Match: AT3G29100.2 (vesicle transport V-snare 13 ) HSP 1 Score: 198.7 bits (504), Expect = 4.7e-51 Identity = 105/165 (63.64%), Postives = 135/165 (81.82%), Query Frame = 0
BLAST of CSPI05G09850 vs. TAIR 10
Match: AT5G39630.1 (Vesicle transport v-SNARE family protein ) HSP 1 Score: 132.9 bits (333), Expect = 3.2e-31 Identity = 79/189 (41.80%), Postives = 121/189 (64.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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