CSPI05G09650 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G09650
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 8120829 .. 8121410 (+)
RNA-Seq ExpressionCSPI05G09650
SyntenyCSPI05G09650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTGTTTCATGAACTAACAGTCACAAAGATAGGAAGAAGCCTAATAGGGATGTTGAATTTCTTAGGATATGGTTTTGTATTAGTATAATTATTACATTATTGAATAATTATTTTACAAGCTTTTAAAGATAACACGTGATTCGAAAGCCAATAAACTTAAAACAAGATTCTTCCCTATTTAGGATAGCTGATAAGCCTTCTGCGCACATGGGGATTGGTTTGAATTTGCTTTGTCCTATTTGCAGGAAGAAGGAGAAATCTACTCATTTATTTTGGGAATGTTAAAATGTAAAAGAAGCTTGGTCAAATTTGATTCCAAACTCATTTAATCTGCTTAATATGTGCAGGACTTGATGGGATACGCTTGCCTATTGAAGCTGGATATGTCAACCTTAATGCGGGGAAGATTGATAAAGTTGTTTGGACGTTTAGGAACAAAATTGCTAATTCTTGGAAGATGAACACCAATGCAGAATGGCTTGAGAATGTTGGTAGCAGAGGTATCAGTTGGGTGGTTTGTGACTCTGATGGATCCTTATCTGCTTTGGTTCGCAACAGCTCAATGCCAAATGACCTGTGA

mRNA sequence

ATTTTGTTTCATGAACTAACAGTCACAAAGATAGGAAGAAGCCTAATAGGGATGTTGAATTTCTTAGGATATGGACTTGATGGGATACGCTTGCCTATTGAAGCTGGATATGTCAACCTTAATGCGGGGAAGATTGATAAAGTTGTTTGGACGTTTAGGAACAAAATTGCTAATTCTTGGAAGATGAACACCAATGCAGAATGGCTTGAGAATGTTGGTAGCAGAGGTATCAGTTGGGTGGTTTGTGACTCTGATGGATCCTTATCTGCTTTGGTTCGCAACAGCTCAATGCCAAATGACCTGTGA

Coding sequence (CDS)

ATTTTGTTTCATGAACTAACAGTCACAAAGATAGGAAGAAGCCTAATAGGGATGTTGAATTTCTTAGGATATGGACTTGATGGGATACGCTTGCCTATTGAAGCTGGATATGTCAACCTTAATGCGGGGAAGATTGATAAAGTTGTTTGGACGTTTAGGAACAAAATTGCTAATTCTTGGAAGATGAACACCAATGCAGAATGGCTTGAGAATGTTGGTAGCAGAGGTATCAGTTGGGTGGTTTGTGACTCTGATGGATCCTTATCTGCTTTGGTTCGCAACAGCTCAATGCCAAATGACCTGTGA

Protein sequence

ILFHELTVTKIGRSLIGMLNFLGYGLDGIRLPIEAGYVNLNAGKIDKVVWTFRNKIANSWKMNTNAEWLENVGSRGISWVVCDSDGSLSALVRNSSMPNDL*
Homology
[Close]
BLAST of CSPI05G09650 vs. ExPASy TrEMBL
Match: A0A0A0KLV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182040 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.1e-50
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 1   ILFHELTVTKIGRSLIGMLNFLGYGLDGIRLPIEAGYVNLNAGKIDKVVWTFRNKIANSW 60
           ILFHELTVTKIGRSLIGMLNFLGYGLDGIRLPIEAGYVNLNAGKIDKVVWTFRNKIANSW
Sbjct: 18  ILFHELTVTKIGRSLIGMLNFLGYGLDGIRLPIEAGYVNLNAGKIDKVVWTFRNKIANSW 77

Query: 61  KMNTNAEWLENVGSRGISWVVCDSDGSLSALVRNSSMPNDL 102
           KMNTNA WLENVGSRGISW+VCDSDGSLSALVRNSSMPNDL
Sbjct: 78  KMNTNAAWLENVGSRGISWMVCDSDGSLSALVRNSSMPNDL 118

[Close]
BLAST of CSPI05G09650 vs. NCBI nr
Match: KAE8647989.1 (hypothetical protein Csa_023961, partial [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 3.9e-10
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 29 IRLPIEAGYVNLNAGKIDKVVWTFRNKIANSWKM 63
          IRLPIEAGYVNLNAGKIDKVVWTFRNKIANSWKM
Sbjct: 1  IRLPIEAGYVNLNAGKIDKVVWTFRNKIANSWKM 34

The following BLAST results are available for this feature:
BLAST of CSPI05G09650 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G09650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLV37.1e-5098.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182040 PE=4 SV=1[more]
BLAST of CSPI05G09650 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647989.13.9e-10100.00hypothetical protein Csa_023961, partial [Cucumis sativus][more]
BLAST of CSPI05G09650 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G09650.1CSPI05G09650.1mRNA